1
|
Navals P, Kwiatkowska A, Mekdad N, Couture F, Desjardins R, Day R, Dory YL. Enhancing the Drug-Like Profile of a Potent Peptide PACE4 Inhibitor by the Formation of a Host-Guest Inclusion Complex with β-Cyclodextrin. Mol Pharm 2023; 20:4559-4573. [PMID: 37555521 DOI: 10.1021/acs.molpharmaceut.3c00261] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/10/2023]
Abstract
The enzyme PACE4 has been validated as a promising therapeutic target to expand the range of prostate cancer (PCa) treatments. In recent years, we have developed a potent peptidomimetic inhibitor, namely, compound C23 (Ac-(DLeu)LLLRVK-4-amidinobenzylamide). Like many peptides, C23 suffers from an unfavorable drug-like profile which, despite our efforts, has not yet benefited from the usual SAR studies. Hence, we turned our attention toward a novel formulation strategy, i.e., the use of cyclodextrins (CDs). CDs can benefit compounds through the formation of "host-guest" complexes, shielding the guest from degradation and enhancing biological survival. In this study, a series of βCD-C23 complexes have been generated and their properties evaluated, including potency toward the enzyme in vitro, a cell-based proliferation assay, and stability in plasma. As a result, a new βCD-formulated lead compound has been identified, which, in addition to being more soluble and more potent, also showed an improved stability profile.
Collapse
Affiliation(s)
- Pauline Navals
- Institut de Pharmacologie de Sherbrooke, Département de Chimie, Faculté des Sciences, Université de Sherbrooke, 3001, 12e Avenue Nord, Sherbrooke, Québec J1H 5N4, Canada
| | - Anna Kwiatkowska
- Institut de Pharmacologie de Sherbrooke, Département de Chirurgie/Urologie, Université de Sherbrooke, 3001, 12e Avenue Nord, Sherbrooke, Québec J1H 5N4, Canada
| | - Nawel Mekdad
- Institut de Pharmacologie de Sherbrooke, Département de Chirurgie/Urologie, Université de Sherbrooke, 3001, 12e Avenue Nord, Sherbrooke, Québec J1H 5N4, Canada
| | - Frédéric Couture
- Institut de Pharmacologie de Sherbrooke, Département de Chirurgie/Urologie, Université de Sherbrooke, 3001, 12e Avenue Nord, Sherbrooke, Québec J1H 5N4, Canada
| | - Roxane Desjardins
- Institut de Pharmacologie de Sherbrooke, Département de Chirurgie/Urologie, Université de Sherbrooke, 3001, 12e Avenue Nord, Sherbrooke, Québec J1H 5N4, Canada
| | - Robert Day
- Phenoswitch Bioscience Inc, 975 Rue Léon-Trépanier, Sherbrooke, Québec J1G 5J6, Canada
| | - Yves L Dory
- Institut de Pharmacologie de Sherbrooke, Département de Chimie, Faculté des Sciences, Université de Sherbrooke, 3001, 12e Avenue Nord, Sherbrooke, Québec J1H 5N4, Canada
| |
Collapse
|
2
|
Benaïssa A, Bouhadiba A, Naili N, Chekkal F, Khelfaoui M, Bouras I, Madjram MS, Zouchoune B, Mogalli S, Malfi N, Nouar L, Madi F. Computational investigation of dimethoate and β-cyclodextrin inclusion complex: molecular structures, intermolecular interactions, and electronic analysis. Struct Chem 2023. [DOI: 10.1007/s11224-023-02162-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/31/2023]
|
3
|
da Silva WF, dos Santos Niculau E, de Oliveira DAB, de Assis MWV, Oliveira MN. Preparation, Physicochemical Characterization and Computational studies of Plectranthus ornatus Codd Essential Oil/β-Cyclodextrin Inclusion Complex. J Mol Struct 2023. [DOI: 10.1016/j.molstruc.2023.135476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/01/2023]
|
4
|
Prabhu AAM, Madi F, Leila N, Kumar GSS, Sathiyaseelan K. Structural Aspects and Stability of Interactions between Phenyl-3,3'-Bis(Indolyl)Methanes and β-Cyclodextrin from Density Functional Theory. Polycycl Aromat Compd 2022. [DOI: 10.1080/10406638.2022.2101490] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/16/2022]
Affiliation(s)
| | - Fatiha Madi
- Laboratory of Computational Chemistry and Nanostructures, Department of Material Sciences, Faculty of Mathematical, Informatics and Material Sciences, University of 08 Mai 1945, Guelma, Algeria
| | - Nouar Leila
- Laboratory of Computational Chemistry and Nanostructures, Department of Material Sciences, Faculty of Mathematical, Informatics and Material Sciences, University of 08 Mai 1945, Guelma, Algeria
| | - G. S. Suresh Kumar
- Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (CSIR-NIIST), Thiruvananthapuram, India
| | - K. Sathiyaseelan
- Department of PG Chemistry, Aditanar College of Arts and Science, Tiruchendur, India
| |
Collapse
|
5
|
Ray S, Roy N, Barman BK, Karmakar P, Bomzan P, Rajbanshi B, Dakua VK, Dutta A, Kumar A, Roy MN. Synthesis and Characterization of an Inclusion Complex of dl-Aminoglutethimide with β-Cyclodextrin and Its Innovative Application in a Biological System: Computational and Experimental Investigations. ACS OMEGA 2022; 7:11208-11216. [PMID: 35415366 PMCID: PMC8992260 DOI: 10.1021/acsomega.2c00011] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/05/2022] [Accepted: 03/09/2022] [Indexed: 06/14/2023]
Abstract
Our present study intended to investigate the encapsulation of DL-AGT within the lipophilic cavity of a β-CD molecule. The consequential inclusion system was characterized by UV-visible spectroscopy and 1H NMR, PXRD, SEM, and FT-IR studies. Molecular docking was performed for the inclusion complex to discover the most proper orientation, and it was seen that the drug DL-AGT fits into the cavity of β-CD in a 1:1 ratio, which was also confirmed from the Job plot. Furthermore, a comparison was done on the basis of cell viability between the drug and its inclusion complex.
Collapse
Affiliation(s)
- Samapika Ray
- University
of North Bengal, Department of Chemistry, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
| | - Niloy Roy
- University
of North Bengal, Department of Chemistry, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
| | - Biraj Kumar Barman
- Parimal
Mitra Smriti Mahavidyalaya, Department of
Chemistry, Malbazar Jalpaiguri, West Bengal, India 735221
| | - Paramita Karmakar
- University
of North Bengal, Department of Chemistry, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
| | - Pranish Bomzan
- University
of North Bengal, Department of Chemistry, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
| | - Biplab Rajbanshi
- University
of North Bengal, Department of Chemistry, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
| | - Vikas Kumar Dakua
- Alipurduar
University, Department of Chemistry, Alipurduar, West Bengal, India 736122
| | - Ankita Dutta
- University
of North Bengal, Department of Biotechnology, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
| | - Anoop Kumar
- University
of North Bengal, Department of Biotechnology, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
| | - Mahendra Nath Roy
- University
of North Bengal, Department of Chemistry, Raja Rammohanpur, Darjeeling, West Bengal, India 734013
- Alipurduar
University, Department of Chemistry, Alipurduar, West Bengal, India 736122
| |
Collapse
|
6
|
Gao S, Jiang J, Li X, Ye F, Fu Y, Zhao L. Electrospun Polymer-Free Nanofibers Incorporating Hydroxypropyl-β-cyclodextrin/Difenoconazole via Supramolecular Assembly for Antifungal Activity. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2021; 69:5871-5881. [PMID: 34013730 DOI: 10.1021/acs.jafc.1c01351] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
In this study, flexible and self-standing hydroxypropyl-β-cyclodextrin/difenoconazole inclusion complex (HPβCD/DZ-IC) nanofibers were prepared by polymer-free electrospinning, which exhibited potential to be a new fast-dissolving pesticide formulation. Scanning electron microscopy and optical microscopy were applied to evaluate the morphology of nanofibers, which showed that the resulting HPβCD/DZ-IC nanofibers were bead-free and uniform. In addition, the proton nuclear magnetic resonance (1H NMR) spectrum suggested a stoichiometric ratio of 1:0.9 (HPβCD/DZ). Other characterization methods, such as UV-vis absorption, fluorescence spectroscopy, Fourier transform infrared spectroscopy (FT-IR), X-ray diffraction (XRD), and thermogravimetric analysis (TGA), were applied in this study. On the one hand, UV-vis absorption, fluorescence spectroscopy, FT-IR, XRD, and TGA provided useful information for the successful formation of an inclusion complex; on the other hand, the results of TGA indicated the thermal stability of DZ was enhanced after the formation of inclusion complexes. Besides, the phase solubility test could explain the increased water solubility of the nanofibers of inclusion complexes formed by DZ and HPβCD. The results of molecular docking studies demonstrated the most favorable binding interactions when HPβCD combined with DZ. The dissolution test and the antifungal performance test exhibited the characteristics of fast dissolution and the excellent antifungal performance of HPβCD/DZ-IC nanofibers, respectively.
Collapse
Affiliation(s)
- Shuang Gao
- Department of Chemistry, Northeast Agricultural University, Harbin 150030, China
| | - Jingyu Jiang
- Department of Chemistry, Northeast Agricultural University, Harbin 150030, China
| | - Xiaoming Li
- Department of Chemistry, Northeast Agricultural University, Harbin 150030, China
| | - Fei Ye
- Department of Chemistry, Northeast Agricultural University, Harbin 150030, China
| | - Ying Fu
- Department of Chemistry, Northeast Agricultural University, Harbin 150030, China
| | - Lixia Zhao
- Department of Chemistry, Northeast Agricultural University, Harbin 150030, China
| |
Collapse
|
7
|
MD and DFT calculations on the structural variations of amino-cyclodextrin as a pH-sensitive carrier for smart carriage and release of Doxorubicin. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129855] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
|
8
|
Bykov ES, Kopytin KA, Onuchak LA, Blatov VA. Monolayer
self‐organization
of cyclodextrins on carbon surface. J CHIN CHEM SOC-TAIP 2020. [DOI: 10.1002/jccs.201900544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Egor S. Bykov
- Department of Physical Chemistry and Chromatography Samara University Samara Russian Federation
- SamaraNIPIneft LLC, Vilonovskaya Samara University Russian Federation
| | - Kirill A. Kopytin
- Department of Physical Chemistry and Chromatography Samara University Samara Russian Federation
| | - Lyudmila A. Onuchak
- Department of Physical Chemistry and Chromatography Samara University Samara Russian Federation
| | - Vladislav A. Blatov
- Samara Center for Theoretical Materials Science (SCTMS) Samara University Samara Russian Federation
- School of Materials Science and Engineering Northwestern Polytechnical University Xi'an Shaanxi People's Republic of China
| |
Collapse
|
9
|
Ismahan L, Leila N, Fatiha M, Abdelkrim G, Mouna C, Nada B, Brahim H. Computational study of inclusion complex of l-Glutamine/beta-Cycldextrin: Electronic and intermolecular interactions investigations. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.127740] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|
10
|
Zhang N, Zane CP, Chen Y, Yildirim E, Hinks D, Tonelli AE, Vinueza NR, Pasquinelli MA. Physical Characterization of Inclusion Complexes of Triphenyl Phosphate and Cyclodextrins in Solution. J Phys Chem B 2020; 124:404-412. [PMID: 31845800 DOI: 10.1021/acs.jpcb.9b09029] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/13/2023]
Abstract
The goal of this work is to provide physical insights into the formation and stability of inclusion complexes (ICs) in aqueous solution between cyclodextrins (CDs) and a common flame retardant, triphenyl phosphate (TPP). Quantum chemistry calculations reveal the possible energetically favorable geometries of TPP in their 1:1 IC form with α-, β-, and γ-CDs as well as their associated complexation, conformational, and interaction energies. High-resolution mass spectrometry (MS) and tandem MS were used with electrospray ionization to study the soluble ICs formed between TPP and CDs. Successful formation of TPP ICs with both β- and γ-CD in solution was detected in the ratio of 1:1 using high-resolution MS in the positive ion mode. Collision-induced dissociation confirmed the formation of TPP ICs with β- and γ-CDs by generating two product ions, TPP and β- or γ-CD, in both cases. Although quantum chemistry calculations suggest that IC formation with α-CD is energetically possible, an IC with α-CD is not observed in aqueous solution using MS, which aligns with what we also previously observed in the solid state. Since TPP forms stable ICs with β- and γ-CDs both in the solid state and in solution suggests that complexation could be a safer alternative than applying TPP directly to a substrate. In addition, complexation with CDs in solution also opens up new processing methods to create flame-retardant fabrics and foams with TPP.
Collapse
Affiliation(s)
- Nanshan Zhang
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| | - Cody P Zane
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| | - Yufei Chen
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| | - Erol Yildirim
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| | - David Hinks
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| | - Alan E Tonelli
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| | - Nelson R Vinueza
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| | - Melissa A Pasquinelli
- Fiber and Polymer Science Program , North Carolina State University , Campus Box 8301 , Raleigh , North Carolina 27695-8301 , United States
| |
Collapse
|
11
|
Nora M, Ismahan L, Abdelkrim G, Mouna C, Leila N, Fatiha M, Nada B, Brahim H. Interactions in inclusion complex of β-cyclodextrin/l-Metheonine: DFT computational studies. J INCL PHENOM MACRO 2019. [DOI: 10.1007/s10847-019-00948-0] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
|
12
|
A DFT study of inclusion complexes of the antituberculosis drugs pyrazinamide and isoniazid with cucurbit[7]uril. J INCL PHENOM MACRO 2017. [DOI: 10.1007/s10847-017-0738-0] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
|
13
|
Wan Y, Wang X, Liu N. Interaction of β-cyclodextrin as catalyst with acetophenone in asymmetric reaction: a theoretical survey. J Mol Model 2014; 20:2268. [PMID: 24842327 DOI: 10.1007/s00894-014-2268-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2014] [Accepted: 04/23/2014] [Indexed: 11/27/2022]
Abstract
The asymmetric reduction of acetophenone with sodium borohydride in the presence of β-cyclodextrin (β-CD) as catalyst can improve selectivity and yield. The interaction between acetophenone and β-CD plays an important role for the reduction of acetophenone. This work studies the reaction of acetophenone in the presence of β-CD using density functional theory (DFT) method. Energy is investigated to find out the lowest energy of two possible complexation models. The geometrical structure confirms that acetophenone inserts into the cavity mainly from the secondary hydroxyl side. Hydrogen bonds are researched on the basis of natural bonding orbital (NBO) analysis, the results confirm the donor-acceptor interactions of complex. Mülliken charge and frontier orbital are employed for revealing the electronic transfer. In addition, (13)C nuclear magnetic resonance ((13)CNMR) spectroscopy shows that the active site concentrates on the carbon atom of carbonyl group. The probable catalytic mechanism of β-CD is discussed in terms of the calculated parameters.
Collapse
Affiliation(s)
- Yali Wan
- Key Laboratory of Environmentally Friendly Chemistry and Applications of Ministry of Education, College of Chemistry, Xiangtan University, Xiangtan, Hunan, 411105, People's Republic of China
| | | | | |
Collapse
|
14
|
β-Cyclodextrin Interaction with Edaravone: Molecular Modeling Study. ADVANCES IN QUANTUM CHEMISTRY 2014. [DOI: 10.1016/b978-0-12-800536-1.00014-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register]
|
15
|
Host–guest interactions between benznidazole and beta-cyclodextrin in multicomponent complex systems involving hydrophilic polymers and triethanolamine in aqueous solution. J Mol Liq 2013. [DOI: 10.1016/j.molliq.2013.07.004] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
|