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Zaghdoud C, Yahia Y, Nagaz K, Martinez-Ballesta MDC. Foliar spraying of zinc oxide nanoparticles improves water transport and nitrogen metabolism in tomato (Solanum lycopersicum L.) seedlings mitigating the negative impacts of cadmium. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2024; 31:37428-37443. [PMID: 38777976 DOI: 10.1007/s11356-024-33738-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2024] [Accepted: 05/16/2024] [Indexed: 05/25/2024]
Abstract
The use of bio-nanotechnology in agriculture-such as the biological applications of metal oxide nanoparticles (NPs)-greatly improves crop yield and quality under different abiotic stress factors including soil metal contamination. Here, we explore the effectiveness of zinc oxide (ZnO)-NPs (0, 50 mg/L) foliar spraying to ameliorate the detrimental effects of cadmium (Cd) on the water transport and nitrogen metabolism in tomato (Solanum lycopersicum Mill. cv. Chibli F1) plants grown on a Cd-supplied (CdCl2; 0, 10, 40 μM) Hoagland nutrient solution. The results depicted that the individually studied factors (ZnO-NPs and Cd) had a significant impact on all the physiological parameters analyzed. Independently to the Cd concentration, ZnO-NPs-sprayed plants showed significantly higher dry weight (DW) in both leaves and roots compared to the non-sprayed ones, which was in consonance with higher and lower levels of Zn2+ and Cd2+ ions, respectively, in these organs. Interestingly, ZnO-NPs spraying improved water status in all Cd-treated plants as evidenced by the increase in root hydraulic conductance (L0), apoplastic water pathway percentage, and leaf and root relative water content (RWC), compared to the non-sprayed plants. This improved water balance was associated with a significant accumulation of osmoprotectant osmolytes, such as proline and soluble sugars in the plant organs, reducing electrolyte leakage (EL), and osmotic potential (ψπ). Also, ZnO-NPs spraying significantly improved NO3- and NH4+ assimilation in the leaf and root tissues of all Cd-treated plants, leading to a reduction in NH4+ toxicity. Our findings point out new insights into how ZnO-NPs affect water transport and nitrogen metabolism in Cd-stressed plants and support their use to improve crop resilience against Cd-contaminated soils.
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Affiliation(s)
- Chokri Zaghdoud
- Dry Land Farming and Oasis Cropping Laboratory, Institute of Arid Regions of Medenine, University of Gabes, 4119, Medenine, Tunisia.
- Technology Transfer Office (TTO), University of Gafsa, 2112, Gafsa, Tunisia.
| | - Yassine Yahia
- Dry Land Farming and Oasis Cropping Laboratory, Institute of Arid Regions of Medenine, University of Gabes, 4119, Medenine, Tunisia
| | - Kamel Nagaz
- Dry Land Farming and Oasis Cropping Laboratory, Institute of Arid Regions of Medenine, University of Gabes, 4119, Medenine, Tunisia
| | - Maria Del Carmen Martinez-Ballesta
- Ingeniería Agronómica, Technical University of Cartagena, Paseo Alfonso XIII 48, E-30203, Cartagena, Spain
- Recursos Fitogenéticos, Instituto de Biotecnología Vegetal, Edificio I+D+i, E-30202, Cartagena, Spain
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Bhattacharyya S, Giridhar M, Meier B, Peiter E, Vothknecht UC, Chigri F. Global transcriptome profiling reveals root- and leaf-specific responses of barley ( Hordeum vulgare L.) to H 2O 2. FRONTIERS IN PLANT SCIENCE 2023; 14:1223778. [PMID: 37771486 PMCID: PMC10523330 DOI: 10.3389/fpls.2023.1223778] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/16/2023] [Accepted: 08/23/2023] [Indexed: 09/30/2023]
Abstract
In cereal crops, such as barley (Hordeum vulgare L.), the ability to appropriately respond to environmental cues is an important factor for yield stability and thus for agricultural production. Reactive oxygen species (ROS), such as hydrogen peroxide (H2O2), are key components of signal transduction cascades involved in plant adaptation to changing environmental conditions. H2O2-mediated stress responses include the modulation of expression of stress-responsive genes required to cope with different abiotic and biotic stresses. Despite its importance, knowledge of the effects of H2O2 on the barley transcriptome is still scarce. In this study, we identified global transcriptomic changes induced after application of 10 mM H2O2 to five-day-old barley plants. In total, 1883 and 1001 differentially expressed genes (DEGs) were identified in roots and leaves, respectively. Most of these DEGs were organ-specific, with only 209 DEGs commonly regulated and 37 counter-regulated between both plant parts. A GO term analysis further confirmed that different processes were affected in roots and leaves. It revealed that DEGs in leaves mostly comprised genes associated with hormone signaling, response to H2O2 and abiotic stresses. This includes many transcriptions factors and small heat shock proteins. DEGs in roots mostly comprised genes linked to crucial aspects of H2O2 catabolism and oxidant detoxification, glutathione metabolism, as well as cell wall modulation. These categories include many peroxidases and glutathione transferases. As with leaves, the H2O2 response category in roots contains small heat shock proteins, however, mostly different members of this family were affected and they were all regulated in the opposite direction in the two plant parts. Validation of the expression of the selected commonly regulated DEGs by qRT-PCR was consistent with the RNA-seq data. The data obtained in this study provide an insight into the molecular mechanisms of oxidative stress responses in barley, which might also play a role upon other stresses that induce oxidative bursts.
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Affiliation(s)
| | - Maya Giridhar
- Institute for Cellular and Molecular Botany, University of Bonn, Bonn, Germany
- Leibniz Institute for Food Systems Biology at the Technical University of Munich, Freising, Germany
| | - Bastian Meier
- Institute of Agricultural and Nutritional Sciences, Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle, Germany
| | - Edgar Peiter
- Institute of Agricultural and Nutritional Sciences, Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle, Germany
| | - Ute C. Vothknecht
- Institute for Cellular and Molecular Botany, University of Bonn, Bonn, Germany
| | - Fatima Chigri
- Institute for Cellular and Molecular Botany, University of Bonn, Bonn, Germany
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Kurowska MM, Wiecha K, Gajek K, Szarejko I. Drought stress and re-watering affect the abundance of TIP aquaporin transcripts in barley. PLoS One 2019; 14:e0226423. [PMID: 31846477 PMCID: PMC6917287 DOI: 10.1371/journal.pone.0226423] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Accepted: 11/26/2019] [Indexed: 11/30/2022] Open
Abstract
Tonoplast Intrinsic Proteins (TIP) are plant aquaporins that are primarily localized in the tonoplast and play a role in the bidirectional flux of water and other substrates across a membrane. In barley, eleven members of the HvTIP gene subfamily have been identified. Here, we describe the transcription profile of the HvTIP genes in the leaves of barley seedlings being grown under optimal moisture conditions, drought stress and a re-watering phase. The applied drought stress caused a 55% decrease in the relative water content (RWC) in seedlings, while re-watering increased the RWC to 90% of the control. Our analysis showed that all HvTIP genes, except HvTIP3;2, HvTIP4;3 and HvTIP5.1, were expressed in leaves of ten-day-old barley seedlings under optimal water conditions with the transcripts of HvTIP2;3, HvTIP1;2 and HvTIP1;1 being the most abundant. We showed, for the first time in barley, a significant variation in the transcriptional activity between the analysed genes under drought stress. After drought treatment, five HvTIP genes, which are engaged in water transport, were down-regulated to varying degrees, while two, HvTIP3;1 and HvTIP4;1, were up-regulated. The HvTIP3;1 isoform, which is postulated as transporting hydrogen peroxide, expressed the highest increase of activity (ca. 5000x) under drought stress, thus indicating its importance in the response to this stress. Re-hydration caused the return of the expression of many genes to the level that was observed under optimal moisture conditions or, at least, a change in this direction Additionally, we examined the promotor regions of HvTIP and detected the presence of the cis-regulatory elements that are connected with the hormone and stress responses in all of the genes. Overall, our results suggest that 7 of 11 studied HvTIP (HvTIP1;1, HvTIP1;2, HvTIP2;1, HvTIP2;2, HvTIP2;3, HvTIP3;1, HvTIP4;1) have an important function during the adaptation of barley to drought stress conditions. We discuss the identified drought-responsive HvTIP in terms of their function in the adaptation of barley to this stress.
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Affiliation(s)
- Marzena Małgorzata Kurowska
- Department of Genetics, Faculty of Biology and Environmental Protection, University of Silesia, Katowice, Poland
- * E-mail:
| | - Klaudia Wiecha
- Department of Genetics, Faculty of Biology and Environmental Protection, University of Silesia, Katowice, Poland
| | - Katarzyna Gajek
- Department of Genetics, Faculty of Biology and Environmental Protection, University of Silesia, Katowice, Poland
| | - Iwona Szarejko
- Department of Genetics, Faculty of Biology and Environmental Protection, University of Silesia, Katowice, Poland
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Tharanya M, Sivasakthi K, Barzana G, Kholová J, Thirunalasundari T, Vadez V. Pearl millet (Pennisetum glaucum) contrasting for the transpiration response to vapour pressure deficit also differ in their dependence on the symplastic and apoplastic water transport pathways. FUNCTIONAL PLANT BIOLOGY : FPB 2018; 45:719-736. [PMID: 32291047 DOI: 10.1071/fp17161] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2016] [Accepted: 01/17/2018] [Indexed: 05/24/2023]
Abstract
Genotypic differences in transpiration rate responses to high vapour pressure deficit (VPD) was earlier reported. Here we tested the hypothesis that this limitation could relate to different degrees of dependence on the apoplastic (spaces between cells), and symplastic water transport pathways (through cells via aquaporin-facilitated transport), which are known to have different hydraulic conductivities. The low transpiration rate (Tr) genotype PRLT 2/89/33 either restricted its transpiration under high VPD, or was more sensitive to VPD than H77/833-2, when grown hydroponically or in soil. The slope of the transpiration response to an ascending series of VPD was lower in whole plants than in de-rooted shoots. In addition, the transpiration response of detached leaves to moderately high VPD (2.67kPa), normalised against leaves exposed to constant VPD (1.27kPa), was similar in low and high Tr genotypes. This suggested that roots hydraulics were a substantial limitation to water flow in pearl millet, especially under high VPD. The dependence on the apoplastic and symplastic water transport pathways was investigated by assessing the transpiration response of plants treated with inhibitors specific to the AQP-mediated symplastic pathway (AgNO3 and H2O2) and to the apoplastic pathway (precipitates of Cu(Fe(CN)6) or Cu(CuFe(CN)6)). When CuSO4 alone was used, Cu ions caused an inhibition of transpiration in both genotypes and more so in H77/833-2. The transpiration of high Tr H77/833-2 was decreased more by AQP inhibitors under low VPD (1.8kPa) than in PRLT 2/89/33, whereas under high VPD (4.2kPa), the transpiration of PRLT 2/89/33 was decreased more by AQP inhibitors than in H77/833-2. The transpiration rate of detached leaves from H77/833-2 when treated with AgNO3 decreased more than in PRLT 2/89/33. Although the root hydraulic conductivity of both genotypes was similar, it decreased more upon the application of a symplastic inhibitor in H77/833-2. The transpiration of low Tr PRLT 2/89/33 was decreased more by apoplastic inhibitors under both low and high VPD. Then the hydraulic conductivity decreased more upon the application of an apoplastic inhibitor in PRLT 2/89/33. In conclusion, both pathways contributed to water transport, and their contribution varied with environmental conditions and genotypes. Roots were a main source of hydraulic limitation in these genotypes of pearl millet, although a leaf limitation was not excluded. The similarity between genotypes in root hydraulic conductivity under normal conditions also suggests changes in this conductivity upon changes in the evaporative demand. The low Tr genotype depended more on the apoplastic pathway for water transport, whereas the high Tr genotype depended on both pathway, may be by 'tuning-up' the symplastic pathway under high transpiration demand, very likely via the involvement of aquaporins.
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Affiliation(s)
- Murugesan Tharanya
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Crop Physiology Laboratory, Patancheru 502324, Telangana, India
| | - Kaliamoorthy Sivasakthi
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Crop Physiology Laboratory, Patancheru 502324, Telangana, India
| | - Gloria Barzana
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Crop Physiology Laboratory, Patancheru 502324, Telangana, India
| | - Jana Kholová
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Crop Physiology Laboratory, Patancheru 502324, Telangana, India
| | | | - Vincent Vadez
- International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Crop Physiology Laboratory, Patancheru 502324, Telangana, India
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Zhang D, Huang Y, Kumar M, Wan Q, Xu Z, Shao H, Pandey GK. Heterologous expression of GmSIP1;3 from soybean in tobacco showed and growth retardation and tolerance to hydrogen peroxide. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2017; 263:210-218. [PMID: 28818377 DOI: 10.1016/j.plantsci.2017.07.018] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Revised: 07/17/2017] [Accepted: 07/24/2017] [Indexed: 06/07/2023]
Abstract
Aquaporins (AQPs) are transmembrane protein channels that are members of Major Intrinsic Proteins (MIP) superfamily. AQPs play important roles in plant reproduction, cell elongation, osmoregulation, influence leaf physiology and are responsive to drought and salt tolerance. Small intrinsic proteins (SIPs)belongs to one of the groups of AQPs, which are mainly localized to endoplasmic reticulum(ER). While this group of aquaporin is being well studied in Arabidopsis, grape and other plant species, not much is known about the molecular regulatory mechanisms driven by ER-type AQPs in Glycine Max. In this study, the function of GmSIP1;3 is studied in detail by using both yeast and plant systems. GmSIP1;3 showed a ubiquitous expression pattern in all different tissues in Glycine Max. Heterologous expression of GmSIP1;3 in Nicotiana tabacum conferred a short root phenotype,growth retardation at seedling stage and significant tolerance to oxidative stress (H2O2) both in yeast and plant systems. Auxin (IAA) content significantly increased in transgenic plants compared with that of wild type, however, the abscisic acid (ABA) content was significantly reduced. Subcellular localization and colocalization analyses showed GmSIP1;3 localized to ER plasma membrane. On the basis of these observations, we postulate that GmSIP1;3 is involved in oxidative stress pathways.
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Affiliation(s)
- Dayong Zhang
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China.
| | - Yihong Huang
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China
| | - Manoj Kumar
- Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, Dhaula Kuan, New Delhi 110021, India
| | - Qun Wan
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China
| | - Zhaolong Xu
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China
| | - Hongbo Shao
- Salt-Soil Agricultural Center, Institute of Agricultural Resources and Environment Jiangsu Academy of Agricultural Sciences, Zhongling Street No.50, Nanjing 210014, China; Jiangsu Key Laboratory for Bioresources of Saline Soils, Jiangsu Synthetic Innovation Center for Coastal Bio-Agriculture, Yancheng Teachers University, Yancheng City, 224002, China.
| | - Girdhar K Pandey
- Department of Plant Molecular Biology, University of Delhi South Campus, Benito Juarez Road, Dhaula Kuan, New Delhi 110021, India.
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He F, Zhang H, Tang M. Aquaporin gene expression and physiological responses of Robinia pseudoacacia L. to the mycorrhizal fungus Rhizophagus irregularis and drought stress. MYCORRHIZA 2016; 26:311-23. [PMID: 26590998 DOI: 10.1007/s00572-015-0670-3] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2015] [Accepted: 11/13/2015] [Indexed: 05/09/2023]
Abstract
The influence of arbuscular mycorrhiza (AM) and drought stress on aquaporin (AQP) gene expression, water status, and photosynthesis was investigated in black locust (Robinia pseudoacacia L.). Seedlings were grown in potted soil inoculated without or with the AM fungus Rhizophagus irregularis, under well-watered and drought stress conditions. Six full-length AQP complementary DNAs (cDNAs) were isolated from Robinia pseudoacacia, named RpTIP1;1, RpTIP1;3, RpTIP2;1, RpPIP1;1, RpPIP1;3, and RpPIP2;1. A phylogenetic analysis of deduced amino acid sequences demonstrated that putative proteins coded by these RpAQP genes belong to the water channel protein family. Expression analysis revealed higher RpPIP expression in roots while RpTIP expression was higher in leaves, except for RpTIP1;3. AM symbiosis regulated host plant AQPs, and the expression of RpAQP genes in mycorrhizal plants depended on soil water condition and plant tissue. Positive effects were observed for plant physiological parameters in AM plants, which had higher dry mass and lower water saturation deficit and electrolyte leakage than non-AM plants. Rhizophagus irregularis inoculation also slightly increased leaf net photosynthetic rate and stomatal conductance under well-watered and drought stress conditions. These findings suggest that AM symbiosis can enhance the drought tolerance in Robinia pseudoacacia plants by regulating the expression of RpAQP genes, and by improving plant biomass, tissue water status, and leaf photosynthesis in host seedlings.
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Affiliation(s)
- Fei He
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Haoqiang Zhang
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China
| | - Ming Tang
- College of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China.
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Devi MJ, Sinclair TR, Jain M, Gallo M. Leaf aquaporin transcript abundance in peanut genotypes diverging in expression of the limited-transpiration trait when subjected to differing vapor pressure deficits and aquaporin inhibitors. PHYSIOLOGIA PLANTARUM 2016; 156:387-96. [PMID: 26303261 DOI: 10.1111/ppl.12378] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2015] [Revised: 05/31/2015] [Accepted: 06/14/2015] [Indexed: 05/02/2023]
Abstract
A plant trait currently being exploited to decrease crop yield loss under water-deficit conditions is limited-transpiration rate (TRlim ) under high atmospheric vapor pressure deficit (VPD) conditions. Although limited genotype comparisons for the TRlim trait have been performed in peanut (Arachis hypogaea), no detailed study to describe the basis for this trait in peanut has been reported. Since it has been hypothesized that the TRlim trait may be a result of low leaf hydraulic conductance associated with aquaporins (AQPs), the first objective of this study was to examine a possible correlation of TRlim to leaf AQP transcriptional profiles in six peanut cultivars. Five of the studied cultivars were selected because they expressed TRlim while the cultivar York did not. Transcripts of six AQPs were measured. Under exposure to high vapor pressure deficit, cultivar C 76-16 had decreased AQP transcript abundance for four of the six AQPs but in York only one AQP had decreased abundance. The second objective was to explore the influence of AQP inhibitors mercury and silver on expression of TRlim and AQP transcription profiles. Quantitative RT-PCR data were compared in cultivars York and C 76-16, which had the extreme response in TR to VPD. Inhibitor treatment resulted in increased abundance of AQP transcripts in both. The results of these experiments indicate that AQP transcript abundance itself may not be useful in identifying genotypes expressing the TRlim trait under high VPD conditions.
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Affiliation(s)
- M Jyostna Devi
- Department of Crop Science, North Carolina State University, Raleigh, NC, 27695, USA
| | - Thomas R Sinclair
- Department of Crop Science, North Carolina State University, Raleigh, NC, 27695, USA
| | - Mukesh Jain
- Agronomy Department, University of Florida, Gainesville, FL, USA
| | - Maria Gallo
- Agronomy Department, University of Florida, Gainesville, FL, USA
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Song L, Nguyen N, Deshmukh RK, Patil GB, Prince SJ, Valliyodan B, Mutava R, Pike SM, Gassmann W, Nguyen HT. Soybean TIP Gene Family Analysis and Characterization of GmTIP1;5 and GmTIP2;5 Water Transport Activity. FRONTIERS IN PLANT SCIENCE 2016; 7:1564. [PMID: 27818669 PMCID: PMC5073556 DOI: 10.3389/fpls.2016.01564] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/29/2016] [Accepted: 10/04/2016] [Indexed: 05/04/2023]
Abstract
Soybean, one of the most important crops worldwide, is severely affected by abiotic stress. Drought and flooding are the major abiotic stresses impacting soybean yield. In this regard, understanding water uptake by plants, its utilization and transport has great importance. In plants, water transport is mainly governed by channel forming aquaporin proteins (AQPs). Tonoplast intrinsic proteins (TIPs) belong to the plant-specific AQP subfamily and are known to have a role in abiotic stress tolerance. In this study, 23 soybean TIP genes were identified based on the latest soybean genome annotation. TIPs were characterized based on conserved structural features and phylogenetic distribution. Expression analysis of soybean TIP genes in various tissues and under abiotic stress conditions demonstrated tissue/stress-response specific differential expression. The natural variations for TIP genes were analyzed using whole genome re-sequencing data available for a set of 106 diverse soybean genotypes including wild types, landraces and elite lines. Results revealed 81 single-nucleotide polymorphisms (SNPs) and several large insertions/deletions in the coding region of TIPs. Among these, non-synonymous SNPs are most likely to have a greater impact on protein function and are candidates for molecular studies as well as for the development of functional markers to assist breeding. The solute transport function of two TIPs was further validated by expression in Xenopus laevis oocytes. GmTIP1;5 was shown to facilitate the rapid movement of water across the oocyte membrane, while GmTIP2;5 facilitated the movement of water and boric acid. The present study provides an initial insight into the possible roles of soybean TIP genes under abiotic stress conditions. Our results will facilitate elucidation of their precise functions during abiotic stress responses and plant development, and will provide potential breeding targets for modifying water movement in soybean.
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Affiliation(s)
- Li Song
- Division of Plant Science, National Center for Soybean Biotechnology, University of MissouriColumbia, MO, USA
| | - Na Nguyen
- Division of Plant Science, National Center for Soybean Biotechnology, University of MissouriColumbia, MO, USA
| | | | - Gunvant B. Patil
- Division of Plant Science, National Center for Soybean Biotechnology, University of MissouriColumbia, MO, USA
| | - Silvas J. Prince
- Division of Plant Science, National Center for Soybean Biotechnology, University of MissouriColumbia, MO, USA
| | - Babu Valliyodan
- Division of Plant Science, National Center for Soybean Biotechnology, University of MissouriColumbia, MO, USA
| | - Raymond Mutava
- Division of Plant Science, National Center for Soybean Biotechnology, University of MissouriColumbia, MO, USA
| | - Sharon M. Pike
- Division of Plant Sciences and Interdisciplinary Plant Group, Christopher S. Bond Life Sciences Center, University of MissouriColumbia, MO, USA
| | - Walter Gassmann
- Division of Plant Sciences and Interdisciplinary Plant Group, Christopher S. Bond Life Sciences Center, University of MissouriColumbia, MO, USA
| | - Henry T. Nguyen
- Division of Plant Science, National Center for Soybean Biotechnology, University of MissouriColumbia, MO, USA
- *Correspondence: Henry T. Nguyen,
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Chen S, Luo Y, Ding G, Xu F. Comparative analysis of Brassica napus plasma membrane proteins under phosphorus deficiency using label-free and MaxQuant-based proteomics approaches. J Proteomics 2015; 133:144-152. [PMID: 26746009 DOI: 10.1016/j.jprot.2015.12.020] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2015] [Revised: 12/14/2015] [Accepted: 12/18/2015] [Indexed: 12/27/2022]
Abstract
UNLABELLED Phosphorus (P) deficiency is a primary constraint for plant growth in terrestrial ecosystems. To better understand the genotypic differences in the adaptation mechanism of Brassica napus to P deficiency, we purified the plasma membrane (PM) from the roots of two genotypes: P-efficient "Eyou Changjia" and P-inefficient "B104-2". Combining label-free quantitative proteomics with the MaxQuant approach, a total of 71 proteins that significantly changed in abundances were identified in the two genotypes in response to P-free starvation, including 31 in "Eyou Changjia" and 40 in "B104-2". Based on comparative genomics study, 28 proteins were mapped to the confidence intervals of quantitative trait loci (QTLs) for P efficiency related traits. Seven decreased proteins with transporter activity were found to be located in the PM by subcellular localization analyses. These proteins involved in intracellular protein transport and ATP hydrolysis coupled proton transport were mapped to the QTL for P content and dry weight. Compared with "B104-2", more decreased proteins referring to transporter activity were found in "Eyou Changjia", showing that substance exchange was decreased in response to short-term P-free starvation. Together with the finding, more decreased proteins functioning in signal transduction and protein synthesis/degradation suggested that "Eyou Changjia" could slow the progression of growth and save more P in response to short-term P-free starvation. BIOLOGICAL SIGNIFICANCE P deficiency seriously limits the production and quality of B. napus. Roots absorb water and nutrients and anchor the plant in the soil. Therefore, to study root PM proteome under P stress would be helpful to understand the adaptation mechanism for P deficiency. However, PM proteome analysis in B. napus has been seldom reported due to the high hydrophobicity and low abundance of PM. Thus, we herein investigated the PM proteome alteration of roots in two B. napus genotypes, with different P deficient tolerances, in response to P-free starvation. The present study offers new insights and novel information for better understanding the adaptative response to P deficiency in B. napus.
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Affiliation(s)
- Shuisen Chen
- National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Agricultural Biotechnology of Liaoning Province, College of Biological Science and Technology, Shenyang Agricultural University, Shenyang 110866, China
| | - Ying Luo
- National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China
| | - Guangda Ding
- National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China
| | - Fangsen Xu
- National Key Laboratory of Crop Genetic Improvement, and Microelement Research Center, Huazhong Agricultural University, Wuhan 430070, China.
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Xiong D, Yu T, Ling X, Fahad S, Peng S, Li Y, Huang J. Sufficient leaf transpiration and nonstructural carbohydrates are beneficial for high-temperature tolerance in three rice (Oryza sativa) cultivars and two nitrogen treatments. FUNCTIONAL PLANT BIOLOGY : FPB 2015; 42:347-356. [PMID: 32480679 DOI: 10.1071/fp14166] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/18/2014] [Accepted: 11/06/2014] [Indexed: 05/26/2023]
Abstract
To determine whether variations in high-temperature (HT) tolerance in three rice (Oryza sativa L.) cultivars and two N treatments are related to leaf transpiration rate (E), and whether the involvement of nonstructural carbohydrates (NSC) in HT tolerance is related to E, a pot experiment supplied with two N levels (low N, 0.077g urea kg-1 soil; sufficient N, 0.538g urea kg-1 soil) was conducted under ambient temperature (AT) and HT with three cultivars, N22, Zhenshan 97B and Koshihikari. HT significantly decreased grain yield and seed setting percentage in Koshihikari and ZS97, which could be partly offset by a sufficient N supply. The most HT-tolerant cultivar, N22, had the highest E and stem NSC concentrations under both N treatments, whereas the most sensitive cultivar, Koshihikari, had the lowest E and stem NSC concentrations. A sufficient N supply significantly increased E in the three cultivars under the HT treatment. Grain yield and seed-setting percentage were positively related to E and plant NSC concentration under HT, and E was positively related to NSC concentration under both AT and HT. Therefore, variations in HT tolerance among rice cultivars and nitrogen treatments were related to E, and possibly to NSC concentration.
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Affiliation(s)
- Dongliang Xiong
- National Key Laboratory of Crop Genetic Improvement, Ministry of Agriculture Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China
| | - Tingting Yu
- National Key Laboratory of Crop Genetic Improvement, Ministry of Agriculture Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China
| | - Xiaoxia Ling
- National Key Laboratory of Crop Genetic Improvement, Ministry of Agriculture Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China
| | - Shah Fahad
- National Key Laboratory of Crop Genetic Improvement, Ministry of Agriculture Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China
| | - Shaobing Peng
- National Key Laboratory of Crop Genetic Improvement, Ministry of Agriculture Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China
| | - Yong Li
- National Key Laboratory of Crop Genetic Improvement, Ministry of Agriculture Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China. Corresponding authors. ;
| | - Jianliang Huang
- National Key Laboratory of Crop Genetic Improvement, Ministry of Agriculture Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, China. Corresponding author
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11
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Lee SE, Yim HK, Lim MN, Yoon IS, Kim JH, Hwang YS. Abscisic acid prevents the coalescence of protein storage vacuoles by upregulating expression of a tonoplast intrinsic protein gene in barley aleurone. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:1191-203. [PMID: 25477530 PMCID: PMC4438444 DOI: 10.1093/jxb/eru467] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/02/2023]
Abstract
Tonoplast intrinsic proteins (TIPs) are integral membrane proteins that are known to function in plants as aquaporins. Here, we propose another role for TIPs during the fusion of protein storage vacuoles (PSVs) in aleurone cells, a process that is promoted by gibberellic acid (GA) and prevented by abscisic acid (ABA). Studies of the expression of barley (Hordeum vulgare) TIP genes (HvTIP) showed that GA specifically decreased the abundance of HvTIP1;2 and HvTIP3;1 transcripts, while ABA strongly increased expression of HvTIP3;1. Increased or decreased expression of HvTIP3;1 interfered with the hormonal effects on vacuolation in aleurone protoplasts. HvTIP3;1 gain-of-function experiments delayed GA-induced vacuolation, whereas HvTIP3;1 loss-of-function experiments promoted vacuolation in ABA-treated aleurone cells. These results indicate that TIP plays a key role in preventing the coalescence of small PSVs in aleurone cells. Hormonal regulation of the HvTIP3;1 promoter is similar to the regulation of the endogenous gene, indicating that induction of the transcription of HvTIP3;1 by ABA is a critical factor in the prevention of PSV coalescence in response to ABA. Promoter analysis using deletions and site-directed mutagenesis of sequences identified three cis-acting elements that are responsible for ABA responsiveness in the HvTIP3;1 promoter. Promoter analysis also showed that ABA responsiveness of the HvTIP3;1 promoter is likely to occur via a unique regulatory system distinct from that involving the ABA-response promoter complexes.
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Affiliation(s)
- Sung-eun Lee
- Department of Bioscience and Biotechnology, Konkuk University, Seoul 143-701, Korea
| | - Hui-kyung Yim
- Department of Bioscience and Biotechnology, Konkuk University, Seoul 143-701, Korea
| | - Mi-na Lim
- Department of Bioscience and Biotechnology, Konkuk University, Seoul 143-701, Korea
| | - In sun Yoon
- Molecular Breeding Division, Natural Academy of Agricultural Science, Rural Development Adminstration, Suwon 441-857, Korea
| | - Jeong hoe Kim
- Department of Biology, Kyungbook National University, Daegu 702-701, Korea
| | - Yong-sic Hwang
- Department of Bioscience and Biotechnology, Konkuk University, Seoul 143-701, Korea
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Zhang D, Tong J, He X, Xu Z, Xu L, Wei P, Huang Y, Brestic M, Ma H, Shao H. A Novel Soybean Intrinsic Protein Gene, GmTIP2;3, Involved in Responding to Osmotic Stress. FRONTIERS IN PLANT SCIENCE 2015; 6:1237. [PMID: 26779248 PMCID: PMC4705450 DOI: 10.3389/fpls.2015.01237] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2015] [Accepted: 12/20/2015] [Indexed: 05/19/2023]
Abstract
Water is essential for plant growth and development. Water deficiency leads to loss of yield and decreased crop quality. To understand water transport mechanisms in plants, we cloned and characterized a novel tonoplast intrinsic protein (TIP) gene from soybean with the highest similarity to TIP2-type from other plants, and thus designated GmTIP2;3. The protein sequence contains two conserved NPA motifs and six transmembrane domains. The expression analysis indicated that this gene was constitutively expressed in all detected tissues, with higher levels in the root, stem and pod, and the accumulation of GmTIP2;3 transcript showed a significant response to osmotic stresses, including 20% PEG6000 (polyethylene glycol) and 100 μM ABA (abscisic acid) treatments. The promoter-GUS (glucuronidase) activity analysis suggested that GmTIP2;3 was also expressed in the root, stem, and leaf, and preferentially expressed in the stele of root and stem, and the core promoter region was 1000 bp in length, located upstream of the ATG start codon. The GUS tissue and induced expression observations were consistent with the findings in soybean. In addition, subcellular localization showed that GmTIP2;3 was a plasma membrane-localized protein. Yeast heterologous expression revealed that GmTIP2;3 could improve tolerance to osmotic stress in yeast cells. Integrating these results, GmTIP2;3 might play an important role in response to osmotic stress in plants.
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Affiliation(s)
- Dayong Zhang
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
- *Correspondence: Dayong Zhang
| | - Jinfeng Tong
- Institute of Botany, Jiangsu Province and Chinese Academy of SciencesNanjing, China
| | - Xiaolan He
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
| | - Zhaolong Xu
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
| | - Ling Xu
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
| | - Peipei Wei
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
| | - Yihong Huang
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
| | - Marian Brestic
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
- Department of Plant Physiology, Slovak Agricultural UniversityNitra, Slovakia
| | - Hongxiang Ma
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
| | - Hongbo Shao
- Jiangsu Key Laboratory for Bioresources of Saline Soils, Provincial Key Laboratory of Agrobiology, Institute of Agro-biotechnology, Jiangsu Academy of Agricultural SciencesNanjing, China
- Key Laboratory of Coastal Biology and Bioresources Utilization, Yantai Institute of Coastal Zone Research, Chinese Academy of SciencesYantai, China
- Hongbo Shao
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Xin S, Yu G, Sun L, Qiang X, Xu N, Cheng X. Expression of tomato SlTIP2;2 enhances the tolerance to salt stress in the transgenic Arabidopsis and interacts with target proteins. JOURNAL OF PLANT RESEARCH 2014; 127:695-708. [PMID: 25186161 DOI: 10.1007/s10265-014-0658-7] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2014] [Accepted: 05/24/2014] [Indexed: 05/02/2023]
Abstract
Three independent transgenic Arabidopsis lines expressing SlTIP2;2 from Solanum lycopersicum L. cv. Lichun under the control of its endogenous promoter were used to analyze the expression of SlTIP2;2 and the salt stress tolerance under NaCl concentration gradient treatment. The expression patterns of SlTIP2;2 were shown to be tissue-specific and NaCl dose-dependent under salt stress. SlTIP2;2-transformed Arabidopsis plants exhibited enhanced salt stress tolerance, and the physiological parameters suggested that SlTIP2;2 has close links with the ion homeostasis and antioxidant enzymes activities in salt-stressed transgenic Arabidopsis. Moreover, SlTIP2;2 expression significantly affected the Na(+) and K(+) fluxes from the root meristematic zones and resulted in remarkable changes in the morphology of the pith ray cells in the inflorescence stems of transgenic Arabidopsis. Based on the yeast growth assay, β-galactosidase activity testing and bimolecular fluorescence complementation, SlTIP1;1, SlTIP2;1 and an UDP-galactose transporter were confirmed to interact with SlTIP2;2, which may greatly broaden our understanding of the physiological functions of aquaporins.
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Affiliation(s)
- Shichao Xin
- Key Lab of Plant Nutrition and Fertilizers, Ministry of Agriculture, Institute of Agricultural Resources and Regional Planning, Chinese Academy of Agricultural Sciences, No. 12 South Street, Zhongguancun, Beijing, 100081, China
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14
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Gaur R, Bhatia S, Gupta M. Generation of expressed sequence tags under cadmium stress for gene discovery and development of molecular markers in chickpea. PROTOPLASMA 2014; 251:955-72. [PMID: 24414095 DOI: 10.1007/s00709-013-0609-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/05/2013] [Accepted: 12/27/2013] [Indexed: 06/03/2023]
Abstract
Chickpea is the world's third most important legume crop and belongs to Fabaceae family but suffered from severe yield loss due to various biotic and abiotic stresses. Development of modern genomic tools such as molecular markers and identification of resistant genes associated with these stresses facilitate improvement in chickpea breeding towards abiotic stress tolerance. In this study, 1597 high-quality expressed sequence tags (ESTs) were generated from a cDNA library of variety Pusa 1105 root tissue after cadmium (Cd) treatment. Assembly of ESTs resulted in a total of 914 unigenes of which putative homology was obtained for 38.8 % of unigenes after BLASTX search. In terms of species distribution, majority of sequences found similarity with Medicago truncatula followed by Glycine max, Vitis vinifera and Populus trichocarpa and Pisum sativum sequences. Functional annotation was assigned using Blast2Go, and the Gene Ontology (GO) terms were categorized into biological process, molecular function and cellular component. Approximately 10.83 % of unigenes were assigned at least one GO term. Moreover, in the distribution of transcripts into various biological pathways, 20 of the annotated transcripts were assigned to ten pathways in KEGG database. A majority of the genes were found to be involved in sulphur and nitrogen metabolism. In the quantitative real-time PCR analysis, five of the transcription factors and three of the transporter genes were found to be highly expressed after Cd treatment. Besides, the utility of ESTs was demonstrated by exploiting them for the development of 83 genic molecular markers including EST-simple sequence repeats and intron targeted polymorphism that would assist in tagging of genes related to metal stress for future prospects.
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Affiliation(s)
- Rashmi Gaur
- Jamia Millia Islamia, Jamia Nagar, New Delhi, 110025, India,
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Perez Di Giorgio J, Soto G, Alleva K, Jozefkowicz C, Amodeo G, Muschietti JP, Ayub ND. Prediction of Aquaporin Function by Integrating Evolutionary and Functional Analyses. J Membr Biol 2013; 247:107-25. [DOI: 10.1007/s00232-013-9618-8] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2013] [Accepted: 11/09/2013] [Indexed: 01/08/2023]
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Xue DW, Jiang H, Hu J, Zhang XQ, Guo LB, Zeng DL, Dong GJ, Sun GC, Qian Q. Characterization of physiological response and identification of associated genes under heat stress in rice seedlings. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2012; 61:46-53. [PMID: 23037947 DOI: 10.1016/j.plaphy.2012.08.011] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2012] [Accepted: 08/27/2012] [Indexed: 05/15/2023]
Abstract
Global warming, which is caused by greenhouse gas emissions, makes food crops more vulnerable to heat stress. Understanding the heat stress-related mechanisms in crops and classifying heat stress-related genes can increase our knowledge in heat-resistant molecular biology and propel developments in molecular design breeding, which can help rice cope with unfavorable temperatures. In this study, we carried out a physiological analysis of rice plants after heat stress. The results show a dramatic increase in malondialdehyde contents and SOD activities. We successfully isolated 11 heat-related rice genes with known function annotation through DNSH, which is an improved SSH method for screening long cDNA fragments. The reanalysis of microarray data from public database revealed that all these genes displayed various expression patterns after heat stress, drought, cold and salt. Quantitative real-time reverse transcription PCR was also performed to validate the expression of these genes after heat stress. The expressions in 10 genes were all significantly changed except for contig 77, which is a CBL-interacting protein kinase. Several reports have been published about the members of the same gene family.
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Affiliation(s)
- Da-Wei Xue
- College of Life and Environment Sciences, Hangzhou Normal University, Hangzhou 310036, China
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Huang X, Zhang Y, Jiao B, Chen G, Huang S, Guo F, Shen Y, Huang Z, Zhao B. Overexpression of the wheat salt tolerance-related gene TaSC enhances salt tolerance in Arabidopsis. JOURNAL OF EXPERIMENTAL BOTANY 2012; 63:5463-5473. [PMID: 22821939 DOI: 10.1093/jxb/ers198] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
A novel gene named TaSC was cloned from salt-tolerant wheat. Northern blot showed that the expression of TaSC in salt-tolerant wheat was up-regulated after salt stress. Real-time quantitative PCR analyses showed that TaSC expression was induced by salt and ABA in wheat. Localization analysis showed that TaSC proteins were localized to the plasma membrane in transgenic Arabidopsis thaliana. The overexpression of TaSC in Col-0 and atsc (SALK_072220) Arabidopsis strains resulted in increased salt tolerance of the transgenic plants. TaSC overexpression in Col-0 and atsc significantly up-regulated the expression of AtFRY1, AtSAD1, and AtCDPK2. AtCDPK2 overexpression in atsc rescued the salt-sensitive phenotype of atsc. The TaSC gene may improve plant salt tolerance by acting via the CDPK pathway.
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Affiliation(s)
- Xi Huang
- College of Life Science, Hebei Normal University, No. 20 Road East of 2nd Ring South, Yuhua District, Shijiazhuang 050024 China
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