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For: Yue J, Wang R, Ma X, Liu J, Lu X, Balaso Thakar S, An N, Liu J, Xia E, Liu Y. Full-length transcriptome sequencing provides insights into the evolution of apocarotenoid biosynthesis in Crocus sativus. Comput Struct Biotechnol J 2020;18:774-783. [PMID: 32280432 PMCID: PMC7132054 DOI: 10.1016/j.csbj.2020.03.022] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2019] [Revised: 03/22/2020] [Accepted: 03/22/2020] [Indexed: 12/31/2022]  Open
Number Cited by Other Article(s)
1
Eshaghi M, Rashidi-Monfared S. Co-regulatory network analysis of the main secondary metabolite (SM) biosynthesis in Crocus sativus L. Sci Rep 2024;14:15839. [PMID: 38982154 PMCID: PMC11233700 DOI: 10.1038/s41598-024-65870-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Accepted: 06/25/2024] [Indexed: 07/11/2024]  Open
2
Xu Z, Chen S, Wang Y, Tian Y, Wang X, Xin T, Li Z, Hua X, Tan S, Sun W, Pu X, Yao H, Gao R, Song J. Crocus genome reveals the evolutionary origin of crocin biosynthesis. Acta Pharm Sin B 2024;14:1878-1891. [PMID: 38572115 PMCID: PMC10985130 DOI: 10.1016/j.apsb.2023.12.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Revised: 10/22/2023] [Accepted: 11/09/2023] [Indexed: 04/05/2024]  Open
3
Deng X, He S, Han Y, Chen Y. Metabolites profiling reveals the dynamic changes of non-volatiles in Pu-erh during Ganpu tea processing. Food Chem X 2023;19:100774. [PMID: 37780327 PMCID: PMC10534103 DOI: 10.1016/j.fochx.2023.100774] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2023] [Revised: 06/08/2023] [Accepted: 06/24/2023] [Indexed: 10/03/2023]  Open
4
Tong N, Shu Q, Wang B, Peng L, Liu Z. Histology, physiology, and transcriptomic and metabolomic profiling reveal the developmental dynamics of annual shoots in tree peonies (Paeonia suffruticosa Andr.). HORTICULTURE RESEARCH 2023;10:uhad152. [PMID: 37701456 PMCID: PMC10493643 DOI: 10.1093/hr/uhad152] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2023] [Accepted: 07/23/2023] [Indexed: 09/14/2023]
5
Das P, Chandra T, Negi A, Jaiswal S, Iquebal MA, Rai A, Kumar D. A comprehensive review on genomic resources in medicinally and industrially important major spices for future breeding programs: Status, utility and challenges. Curr Res Food Sci 2023;7:100579. [PMID: 37701635 PMCID: PMC10494321 DOI: 10.1016/j.crfs.2023.100579] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2023] [Revised: 08/21/2023] [Accepted: 08/26/2023] [Indexed: 09/14/2023]  Open
6
Li J, Van de Peer Y, Li Z. Inference of Ancient Polyploidy Using Transcriptome Data. Methods Mol Biol 2023;2545:47-76. [PMID: 36720807 DOI: 10.1007/978-1-0716-2561-3_3] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/02/2023]
7
Yue J, Chen Q, Wang Y, Zhang L, Ye C, Wang X, Cao S, Lin Y, Huang W, Xian H, Qin H, Wang Y, Zhang S, Wu Y, Wang S, Yue Y, Liu Y. Telomere-to-telomere and gap-free reference genome assembly of the kiwifruit Actinidia chinensis. HORTICULTURE RESEARCH 2023;10:uhac264. [PMID: 36778189 PMCID: PMC9909506 DOI: 10.1093/hr/uhac264] [Citation(s) in RCA: 37] [Impact Index Per Article: 37.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2022] [Accepted: 11/21/2022] [Indexed: 05/19/2023]
8
Shi Z, Zhao W, Li Z, Kang D, Ai P, Ding H, Wang Z. Development and validation of SSR markers related to flower color based on full-length transcriptome sequencing in Chrysanthemum. Sci Rep 2022;12:22310. [PMID: 36566291 PMCID: PMC9789954 DOI: 10.1038/s41598-022-26664-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2022] [Accepted: 12/19/2022] [Indexed: 12/25/2022]  Open
9
Samadi N, Naghavi MR, Moratalla-López N, Alonso GL, Shokrpour M. Morphological, molecular and phytochemical variations induced by colchicine and EMS chemical mutagens in Crocus sativus L. FOOD CHEMISTRY: MOLECULAR SCIENCES 2022;4:100086. [PMID: 35415695 PMCID: PMC8991884 DOI: 10.1016/j.fochms.2022.100086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/21/2021] [Revised: 01/24/2022] [Accepted: 02/11/2022] [Indexed: 11/19/2022]
10
Husaini AM, Haq SAU, Jiménez AJL. Understanding saffron biology using omics- and bioinformatics tools: stepping towards a better Crocus phenome. Mol Biol Rep 2022;49:5325-5340. [PMID: 35106686 PMCID: PMC8807023 DOI: 10.1007/s11033-021-07053-x] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Accepted: 12/06/2021] [Indexed: 12/13/2022]
11
Xu L, Cao M, Wang Q, Xu J, Liu C, Ullah N, Li J, Hou Z, Liang Z, Zhou W, Liu A. Insights into the plateau adaptation of Salvia castanea by comparative genomic and WGCNA analyses. J Adv Res 2022;42:221-235. [PMID: 36089521 PMCID: PMC9788944 DOI: 10.1016/j.jare.2022.02.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2021] [Revised: 01/30/2022] [Accepted: 02/10/2022] [Indexed: 12/27/2022]  Open
12
Liu X, Gong X, Liu Y, Liu J, Zhang H, Qiao S, Li G, Tang M. Application of High-Throughput Sequencing on the Chinese Herbal Medicine for the Data-Mining of the Bioactive Compounds. FRONTIERS IN PLANT SCIENCE 2022;13:900035. [PMID: 35909744 PMCID: PMC9331165 DOI: 10.3389/fpls.2022.900035] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Accepted: 06/10/2022] [Indexed: 05/11/2023]
13
The Relation between Drying Conditions and the Development of Volatile Compounds in Saffron (Crocus sativus). Molecules 2021;26:molecules26226954. [PMID: 34834046 PMCID: PMC8621395 DOI: 10.3390/molecules26226954] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2021] [Revised: 11/09/2021] [Accepted: 11/16/2021] [Indexed: 11/17/2022]  Open
14
Wang L, Lei T, Han G, Yue J, Zhang X, Yang Q, Ruan H, Gu C, Zhang Q, Qian T, Zhang N, Qian W, Wang Q, Pang X, Shu Y, Gao L, Wang Y. The chromosome-scale reference genome of Rubus chingii Hu provides insight into the biosynthetic pathway of hydrolyzable tannins. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021;107:1466-1477. [PMID: 34174125 DOI: 10.1111/tpj.15394] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2021] [Revised: 06/05/2021] [Accepted: 06/21/2021] [Indexed: 05/09/2023]
15
The Beneficial Effects of Saffron Extract on Potential Oxidative Stress in Cardiovascular Diseases. OXIDATIVE MEDICINE AND CELLULAR LONGEVITY 2021;2021:6699821. [PMID: 33542784 PMCID: PMC7840270 DOI: 10.1155/2021/6699821] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/26/2020] [Revised: 12/22/2020] [Accepted: 01/07/2021] [Indexed: 12/18/2022]
16
Chen J, Zhou G, Dong Y, Qian X, Li J, Xu X, Huang H, Xu L, Li L. Screening of Key Proteins Affecting Floral Initiation of Saffron Under Cold Stress Using iTRAQ-Based Proteomics. FRONTIERS IN PLANT SCIENCE 2021;12:644934. [PMID: 34046047 PMCID: PMC8144468 DOI: 10.3389/fpls.2021.644934] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Accepted: 03/30/2021] [Indexed: 05/17/2023]
17
Sun L, Xin F, Alper HS. Bio-synthesis of food additives and colorants-a growing trend in future food. Biotechnol Adv 2021;47:107694. [PMID: 33388370 DOI: 10.1016/j.biotechadv.2020.107694] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2020] [Revised: 12/24/2020] [Accepted: 12/27/2020] [Indexed: 02/07/2023]
18
Zhao D, Luan Y, Xia X, Shi W, Tang Y, Tao J. Lignin provides mechanical support to herbaceous peony (Paeonia lactiflora Pall.) stems. HORTICULTURE RESEARCH 2020;7:213. [PMID: 33372177 PMCID: PMC7769982 DOI: 10.1038/s41438-020-00451-5] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2020] [Revised: 11/19/2020] [Accepted: 11/20/2020] [Indexed: 05/23/2023]
19
Liu T, Yu S, Xu Z, Tan J, Wang B, Liu YG, Zhu Q. Prospects and progress on crocin biosynthetic pathway and metabolic engineering. Comput Struct Biotechnol J 2020;18:3278-3286. [PMID: 33209212 PMCID: PMC7653203 DOI: 10.1016/j.csbj.2020.10.019] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 10/15/2020] [Accepted: 10/17/2020] [Indexed: 12/22/2022]  Open
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