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Li Y, Shi X, Chen Y, Luo S, Qin Z, Chen S, Wu Y, Yu F. Quantitative proteomic analysis of the mechanism of Cd toxicity in Enterobacter sp. FM-1: Comparison of different growth stages. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 336:122513. [PMID: 37673320 DOI: 10.1016/j.envpol.2023.122513] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2023] [Revised: 07/31/2023] [Accepted: 09/04/2023] [Indexed: 09/08/2023]
Abstract
Enterobacter sp. are widely used in bioremediation, but the mechanism of Cadmium (Cd) toxicity in Enterobacter sp. has been poorly studied. In the present study, we determined the tolerance of Enterobacter sp. FM-1 to Cd by analyzing the physiological and biochemical responses of FM-1 induced under Cd stress. Differentially expressed proteins (DEPs) under exposure to different Cd environments were analyzed by 4D-label-free proteomics to provide a comprehensive understanding of Cd toxicity in FM-1. The greatest total number of DEPs, 1148, was found in the High concentration vs. Control comparison group at 10 h. When protein expression was compared after different incubation times, FM-1 showed the highest Cd tolerance at 48 h. Additionally, with an increasing incubation time, different comparison groups gradually began to show similar growth patterns, which was reflected in the GO enrichment analysis. Notably, only 815 proteins were identified in the High concentration vs. Control group, and KEGG enrichment analysis revealed that these proteins were significantly enriched in the pyruvate metabolism, oxidative phosphorylation, peroxisome, glyoxylate and dicarboxylate metabolism, and citrate cycle pathways. These results suggested that an increased incubation time allows FM-1 adapt and survive in an environment with Cd toxicity, and protein expression significantly increased in response to oxidative stress in a Cd-contaminated environment during the pre-growth period. This study provides new perspectives on bacterial participation in bioremediation and expands our understanding of the mechanism of bacterial resistance under Cd exposure.
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Affiliation(s)
- Yi Li
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, 541004, Guilin, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China
| | - Xinwei Shi
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China
| | - Yuyuan Chen
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China
| | - Shiyu Luo
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China
| | - Zhongkai Qin
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China
| | - Shuairen Chen
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China
| | - Yamei Wu
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China
| | - Fangming Yu
- Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection (Guangxi Normal University), Ministry of Education, China; Guangxi Key Laboratory of Landscape Resources Conservation and Sustainable Utilization in Lijiang River Basin, Guangxi Normal University, 541004, Guilin, China; College of Environment and Resources, Guangxi Normal University, 541004, Guilin, China.
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Cuypers A, Vanbuel I, Iven V, Kunnen K, Vandionant S, Huybrechts M, Hendrix S. Cadmium-induced oxidative stress responses and acclimation in plants require fine-tuning of redox biology at subcellular level. Free Radic Biol Med 2023; 199:81-96. [PMID: 36775109 DOI: 10.1016/j.freeradbiomed.2023.02.010] [Citation(s) in RCA: 17] [Impact Index Per Article: 17.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/29/2022] [Revised: 01/31/2023] [Accepted: 02/08/2023] [Indexed: 02/12/2023]
Abstract
Cadmium (Cd) is one of the most toxic compounds released into our environment and is harmful to human health, urging the need to remediate Cd-polluted soils. To this end, it is important to increase our insight into the molecular mechanisms underlying Cd stress responses in plants, ultimately leading to acclimation, and to develop novel strategies for economic validation of these soils. Albeit its non-redox-active nature, Cd causes a cellular oxidative challenge, which is a crucial determinant in the onset of diverse signalling cascades required for long-term acclimation and survival of Cd-exposed plants. Although it is well known that Cd affects reactive oxygen species (ROS) production and scavenging, the contribution of individual organelles to Cd-induced oxidative stress responses is less well studied. Here, we provide an overview of the current information on Cd-induced organellar responses with special attention to redox biology. We propose that an integration of organellar ROS signals with other signalling pathways is essential to finetune plant acclimation to Cd stress.
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Affiliation(s)
- Ann Cuypers
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, B-3590, Diepenbeek, Belgium.
| | - Isabeau Vanbuel
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, B-3590, Diepenbeek, Belgium
| | - Verena Iven
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, B-3590, Diepenbeek, Belgium
| | - Kris Kunnen
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, B-3590, Diepenbeek, Belgium
| | - Stéphanie Vandionant
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, B-3590, Diepenbeek, Belgium
| | - Michiel Huybrechts
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, B-3590, Diepenbeek, Belgium
| | - Sophie Hendrix
- Environmental Biology, Centre for Environmental Sciences, Hasselt University, B-3590, Diepenbeek, Belgium
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Salbitani G, Maresca V, Cianciullo P, Bossa R, Carfagna S, Basile A. Non-Protein Thiol Compounds and Antioxidant Responses Involved in Bryophyte Heavy-Metal Tolerance. Int J Mol Sci 2023; 24:5302. [PMID: 36982378 PMCID: PMC10049163 DOI: 10.3390/ijms24065302] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 02/23/2023] [Accepted: 03/04/2023] [Indexed: 03/12/2023] Open
Abstract
Heavy-metal pollution represents a problem which has been widely discussed in recent years. The biological effects of heavy metals have been studied in both animals and plants, ranging from oxidative stress to genotoxicity. Plants, above all metal-tolerant species, have evolved a wide spectrum of strategies to counteract exposure to toxic metal concentrations. Among these strategies, the chelation and vacuolar sequestration of heavy metals are, after cell-wall immobilization, the first line of defence that prevent heavy metals from interacting with cell components. Furthermore, bryophytes activate a series of antioxidant non-enzymatic and enzymatic responses to counteract the effects of heavy metal in the cellular compartments. In this review, the role of non-protein thiol compounds and antioxidant molecules in bryophytes will be discussed.
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Affiliation(s)
| | | | | | | | | | - Adriana Basile
- Department of Biology, University of Naples Federico II, 80138 Naples, Italy
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Finger-Teixeira A, Ishii-Iwamoto EL, Marchiosi R, Coelho ÉMP, Constantin RP, Dos Santos WD, Soares AR, Ferrarese-Filho O. Cadmium uncouples mitochondrial oxidative phosphorylation and induces oxidative cellular stress in soybean roots. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2021; 28:67711-67723. [PMID: 34263402 DOI: 10.1007/s11356-021-15368-2] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Accepted: 07/05/2021] [Indexed: 06/13/2023]
Abstract
Cadmium (Cd) inhibits soybean root growth, but its exact mode of action is still not completely understood. We evaluated the effects of Cd on growth, mitochondrial respiration, lipid peroxidation, total phenols, glutathione, and activities of lipoxygenase (LOX), superoxide dismutase (SOD), and catalase (CAT) in soybean roots. In primary roots, Cd stimulated KCN-insensitive respiration and KCN-SHAM-insensitive respiration, indicating the involvement of the alternative oxidase (AOX) pathway, while it decreased KCN-sensitive respiration, suggesting an inhibition of the cytochrome oxidase pathway (COX). In isolated mitochondria, Cd uncoupled the oxidative phosphorylation since it decreased state III respiration (coupled respiration) and ADP/O and respiratory control ratios, while it increased state IV respiration (depletion of exogenously added ADP). The uncoupling effect increased extramitochondrial LOX activity, lipid peroxidation, and oxidized and reduced glutathione, which induced an antioxidant response with enhanced SOD and CAT activities. In brief, our findings reveal that Cd acts as an uncoupler of the mitochondrial oxidative phosphorylation in soybean roots, disturbing cellular respiration and inducing oxidative cellular stress.
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Affiliation(s)
- Aline Finger-Teixeira
- Laboratory of Plant Biochemistry, Department of Biochemistry, University of Maringá, Maringá, PR, 87020-900, Brazil
| | - Emy Luiza Ishii-Iwamoto
- Laboratory of Biological Oxidations, Department of Biochemistry, University of Maringá, Maringá, PR, 87020-900, Brazil
| | - Rogério Marchiosi
- Laboratory of Plant Biochemistry, Department of Biochemistry, University of Maringá, Maringá, PR, 87020-900, Brazil
| | - Érica Marusa Pergo Coelho
- Laboratory of Biochemistry, Department of Agronomic Sciences, University of Maringá, Umuarama, PR, 87500-000, Brazil
| | - Rodrigo Polimeni Constantin
- Laboratory of Biological Oxidations, Department of Biochemistry, University of Maringá, Maringá, PR, 87020-900, Brazil
| | - Wanderley Dantas Dos Santos
- Laboratory of Plant Biochemistry, Department of Biochemistry, University of Maringá, Maringá, PR, 87020-900, Brazil
| | - Anderson Ricardo Soares
- Laboratory of Plant Biochemistry, Department of Biochemistry, University of Maringá, Maringá, PR, 87020-900, Brazil
| | - Osvaldo Ferrarese-Filho
- Laboratory of Plant Biochemistry, Department of Biochemistry, University of Maringá, Maringá, PR, 87020-900, Brazil.
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Kováčik J. Basic physiology and biochemistry in environmental/experimental plant studies: How to quantify and interpret metabolites correctly. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 286:117192. [PMID: 34020219 DOI: 10.1016/j.envpol.2021.117192] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/12/2021] [Revised: 04/12/2021] [Accepted: 04/18/2021] [Indexed: 06/12/2023]
Abstract
As a reviewer of ca. 50 manuscripts per year submitted to various journals, I often come across questionable metabolic data (both over- or under-estimated) mainly in the journals from the section of Environmental Sciences of Web of Science. Though the trends of visibly incorrect metabolite values may be informative (changes in response to applied treatments or environmental factors), absolute values must be precise enough to allow inter-specific comparison and eventual subsequent calculations. Technical correctness of quantification and calculation of such data is therefore often questionable. One problem arises when calculating metabolites concentration (often nmol or μmol/g of biomass) and another problem is the impact of altered water content on metabolite level (then trend per gram of fresh or dry biomass will differ). Recent discrepancies I found when searching for the literature prompted me to write this technical note aimed at focusing attention of researchers on these problems. I exclude any conflict of interest when discussing the quoted published studies. I strongly urge interested researchers to verify the correctness of metabolite quantification (extraction, dilution/calculation and alternative methods) and also to study similar literature for comparison in order to prevent the spread of incorrect data in the scientific literature.
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Affiliation(s)
- Jozef Kováčik
- Department of Biology, University of Trnava, Priemyselná 4, 918 43, Trnava, Slovak Republic.
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Bellini E, Betti C, Sanità di Toppi L. Responses to Cadmium in Early-Diverging Streptophytes (Charophytes and Bryophytes): Current Views and Potential Applications. PLANTS (BASEL, SWITZERLAND) 2021; 10:770. [PMID: 33919852 PMCID: PMC8070800 DOI: 10.3390/plants10040770] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/02/2021] [Revised: 04/08/2021] [Accepted: 04/09/2021] [Indexed: 11/16/2022]
Abstract
Several transition metals are essential for plant growth and development, as they are involved in various fundamental metabolic functions. By contrast, cadmium (Cd) is a metal that can prove extremely toxic for plants and other organisms in a dose-dependent manner. Charophytes and bryophytes are early-diverging streptophytes widely employed for biomonitoring purposes, as they are able to cope with high concentrations of toxic metal(loid)s without showing any apparent heavy damage. In this review, we will deal with different mechanisms that charophytes and bryophytes have evolved to respond to Cd at a cellular level. Particular attention will be addressed to strategies involving Cd vacuolar sequestration and cell wall immobilization, focusing on specific mechanisms that help achieve detoxification. Understanding the effects of metal(loid) pollution and accumulation on the morpho-physiological traits of charophytes and bryophytes can be in fact fundamental for optimizing their use as phytomonitors and/or phytoremediators.
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Affiliation(s)
- Erika Bellini
- Department of Biology, University of Pisa, 56126 Pisa, Italy; (E.B.); (L.S.d.T.)
| | - Camilla Betti
- Department of Medicine, University of Perugia, 06132 Perugia, Italy
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