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Taggart EL, Wolff EJ, Yanar P, Blobe JP, Shugrue CR. Development of an oxazole-based cleavable linker for peptides. Bioorg Med Chem 2024; 102:117663. [PMID: 38457910 DOI: 10.1016/j.bmc.2024.117663] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2023] [Revised: 02/06/2024] [Accepted: 02/29/2024] [Indexed: 03/10/2024]
Abstract
We report the development of a new oxazole-based cleavable linker to release peptides from attached cargo. Oxazoles are stable to most reaction conditions, yet they can be rapidly cleaved in the presence of single-electron oxidants like cerium ammonium nitrate (CAN). An oxazole linker could be synthesized and attached to peptides through standard solid-phase peptide coupling reactions. Cleavage of these peptide-oxazole conjugates is demonstrated on a broad scope of peptides containing various natural and unnatural amino acids. These results represent the first example of a peptide-based linker that is cleaved through single-electron oxidation. The oxazole is also demonstrated to be a suitable linker for both the release of a peptide from a conjugated small molecule and the orthogonal release of cargo from a peptide containing multiple cleavable linkers. Oxazole linkers could serve as a promising tool for peptide screening platforms such as peptide-encoded libraries.
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Affiliation(s)
- Elizabeth L Taggart
- Department of Chemistry, University of Richmond, Gottwald Science Center B-100 138 UR Drive University of Richmond, VA 23173, United States
| | - Evan J Wolff
- Department of Chemistry, University of Richmond, Gottwald Science Center B-100 138 UR Drive University of Richmond, VA 23173, United States
| | - Pamira Yanar
- Department of Chemistry, University of Richmond, Gottwald Science Center B-100 138 UR Drive University of Richmond, VA 23173, United States
| | - John P Blobe
- Department of Chemistry, University of Richmond, Gottwald Science Center B-100 138 UR Drive University of Richmond, VA 23173, United States
| | - Christopher R Shugrue
- Department of Chemistry, University of Richmond, Gottwald Science Center B-100 138 UR Drive University of Richmond, VA 23173, United States.
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2
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Kim SH, Son GH, Seok JY, Chun SK, Yun H, Jang J, Suh YG, Kim K, Jung JW, Chung S. Identification of a novel class of cortisol biosynthesis inhibitors and its implications in a therapeutic strategy for hypercortisolism. Life Sci 2023; 325:121744. [PMID: 37127185 DOI: 10.1016/j.lfs.2023.121744] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 04/21/2023] [Accepted: 04/24/2023] [Indexed: 05/03/2023]
Abstract
AIMS Dysregulation of adrenocortical steroid (corticosteroids) biosynthesis leads to pathological conditions such as Cushing's syndrome. Although several classes of steroid biosynthesis inhibitors have been developed to treat cortisol overproduction, limitations such as insufficient efficacy, adverse effects, and/or tolerability still remain. The present study aimed to develop a new class of small molecules that inhibit cortisol production, and investigated their putative modes of action. MAIN METHODS We screened an in-house chemical library with drug-like chemical scaffolds using human adrenocortical NCI-H295R cells. We then evaluated and validated the effects of the selected compounds at multiple regulatory steps of the adrenal steroidogenic pathway. Finally, genome-wide RNA expression analysis coupled with gene enrichment analysis was conducted to infer possible action mechanisms. KEY FINDINGS A subset of benzimidazolylurea derivatives, including a representative compound (designated as CJ28), inhibited both basal and stimulated production of cortisol and related intermediate steroids. CJ28 attenuated the mRNA expression of multiple genes involved in steroidogenesis and cholesterol biosynthesis. Furthermore, CJ28 significantly attenuated de novo cholesterol biosynthesis, which contributed to its suppression of cortisol production. SIGNIFICANCE We identified a novel chemical scaffold that exerts inhibitory effects on cortisol and cholesterol biosynthesis via coordinated transcriptional silencing of gene expression networks. Our findings also reveal an additional adrenal-directed pharmacological strategy for hypercortisolism involving a combination of inhibitors targeting steroidogenesis and de novo cholesterol biosynthesis.
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Affiliation(s)
- Soo Hyun Kim
- Department of Brain and Cognitive Sciences, Scranton College, Ewha Womans University, Seoul 03760, Republic of Korea
| | - Gi Hoon Son
- Department of Biomedical Sciences and Department of Legal Medicine, College of Medicine, Korea University, Seoul 02841, Republic of Korea
| | - Joo Young Seok
- College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu 41566, Republic of Korea
| | - Sung Kook Chun
- Department of Biological Chemistry, University of California, Irvine, CA 92697, USA
| | - Hwayoung Yun
- College of Pharmacy, Pusan National University, Busan 46241, Republic of Korea
| | - Jaebong Jang
- College of Pharmacy, Korea University, Sejong 30019, Republic of Korea
| | - Young-Ger Suh
- College of Pharmacy, CHA University, Pocheon 11160, Republic of Korea
| | - Kyungjin Kim
- Department of Brain Sciences, Daegu-Gyeongbuk Institute of Science & Technology (DGIST), Daegu 42988, Republic of Korea
| | - Jong-Wha Jung
- College of Pharmacy, Research Institute of Pharmaceutical Sciences, Kyungpook National University, Daegu 41566, Republic of Korea.
| | - Sooyoung Chung
- Department of Brain and Cognitive Sciences, Scranton College, Ewha Womans University, Seoul 03760, Republic of Korea.
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3
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Bystrov DM, Ananyev IV, Fershtat LL, Makhova NN. Direct Synthesis of N-(1,2,5-Oxadiazolyl)hydrazones through a Diazotization/Reduction/Condensation Cascade. J Org Chem 2020; 85:15466-15475. [PMID: 33185453 DOI: 10.1021/acs.joc.0c02243] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
A straightforward synthesis of a series of previously unknown N-(1,2,5-oxadiazolyl)hydrazones through the diazotization/reduction/condensation cascade of amino-1,2,5-oxadiazoles was accomplished. The described protocol was suitable for a wide array of target hydrazones, which were prepared in good to high yields under smooth reaction conditions with very good functional group tolerance. Importantly, the presented approach unveils a direct route to in situ generation of previously inaccessible (1,2,5-oxadiazolyl)hydrazines. In addition, a first example of the ionic structure incorporating a protonated hydrazone motif linked to the 1,2,5-oxadiazole 2-oxide subunit was synthesized, indicating the stability of prepared compounds toward acid-promoted hydrolysis. Overall, this method provides a direct access to the isosteric analogues of drug candidates for treatment of various neglected diseases, thus enabling their potential application in medicinal chemistry and drug design.
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Affiliation(s)
- Dmitry M Bystrov
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prosp., 47, Moscow 119991, Russia
| | - Ivan V Ananyev
- A. N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, Vavilova Str., 28, Moscow 119991, Russia.,Plekhanov Russian University of Economics, Stremyanny Per. 36, Moscow 117997, Russia
| | - Leonid L Fershtat
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prosp., 47, Moscow 119991, Russia
| | - Nina N Makhova
- N. D. Zelinsky Institute of Organic Chemistry, Russian Academy of Sciences, Leninsky Prosp., 47, Moscow 119991, Russia
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4
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Miller CW, Johnson EC, Sausa RC, Orlicki JA, Sabatini JJ. A Safer Synthesis of the Explosive Precursors 4-Aminofurazan-3-Carboxylic Acid and its Ethyl Ester Derivative. Org Process Res Dev 2020. [DOI: 10.1021/acs.oprd.0c00068] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Christopher W. Miller
- Energetics Synthesis & Formulation Branch, CCDC U.S. Army Research Laboratory, Aberdeen Proving Ground, Maryland 21005, United States
| | - Eric C. Johnson
- Energetics Synthesis & Formulation Branch, CCDC U.S. Army Research Laboratory, Aberdeen Proving Ground, Maryland 21005, United States
| | - Rosario C. Sausa
- Detonation Sciences & Modeling Branch, CCDC U.S. Army Research Laboratory, Aberdeen Proving Ground, Maryland 21005, United States
| | - Joshua A. Orlicki
- Polymers Branch, CCDC U.S. Army Research Laboratory, Aberdeen Proving Ground, Maryland 21005, United States
| | - Jesse J. Sabatini
- Energetics Synthesis & Formulation Branch, CCDC U.S. Army Research Laboratory, Aberdeen Proving Ground, Maryland 21005, United States
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5
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Safyanova IS, Bondar OA, Pavlishchuk AV, Omelchenko IV, Iskenderov TS, Kalibabchuk VA. Crystal structure of poly[(μ 3-4-amino-1,2,5-oxa-diazole-3-hydroxamato)thallium(I)]. Acta Crystallogr E Crystallogr Commun 2020; 76:328-331. [PMID: 32148870 PMCID: PMC7057383 DOI: 10.1107/s2056989020001577] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2019] [Accepted: 02/04/2020] [Indexed: 11/24/2022]
Abstract
The title compound represents the thallium(I) salt of a substituted 1,2,5-oxa-diazole, [Tl(C3H3N4O3)] n , with amino- and hydroxamate groups in the 4- and 3- positions of the oxa-diazole ring, respectively. In the crystal, the deprotonated hydroxamate group represents an inter-mediate between the keto/enol tautomers and forms a five-membered chelate ring with the thallium(I) cation. The coordination sphere of the cation is augmented to a distorted disphenoid by two monodentately binding O atoms from two adjacent anions, leading to the formation of zigzag chains extending parallel to the b axis. The cohesion within the chains is supported by π-π stacking [centroid-centroid distance = 3.746 (3) Å] and inter-molecular N-H⋯N hydrogen bonds.
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Affiliation(s)
- Inna S. Safyanova
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, Kyiv, 01601, Ukraine
| | - Oksana A. Bondar
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, Kyiv, 01601, Ukraine
| | - Anna V. Pavlishchuk
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, Kyiv, 01601, Ukraine
| | - Iryna V. Omelchenko
- SSI "Institute for Single Crystals", National Academy of Sciences of Ukraine, Nauky ave. 60, 61001 Kharkiv, Ukraine
| | - Turganbay S. Iskenderov
- Department of Chemistry, National Taras Shevchenko University of Kyiv, Volodymyrska Street 64, Kyiv, 01601, Ukraine
| | - Valentina A. Kalibabchuk
- Department of General Chemistry, O.O. Bohomolets National Medical University, Shevchenko Blvd. 13, 01601 Kyiv, Ukraine
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6
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Neel AJ, Zhao R. Mild Synthesis of Substituted 1,2,5-Oxadiazoles Using 1,1'-Carbonyldiimidazole as a Dehydrating Agent. Org Lett 2018; 20:2024-2027. [PMID: 29553273 DOI: 10.1021/acs.orglett.8b00568] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
1,1'-Carbonyldiimidazole was found to induce the formation of a variety of 3,4-disubstituted 1,2,5-oxadiazoles (furazans) from the corresponding bisoximes at ambient temperature. This method enables these inherently energetic compounds to be prepared at temperatures well below their decomposition points and with improved functional group compatibility relative to prior methods. Conditions were developed that allowed for the first high-yielding synthesis of chlorofurazans from their amino counterparts, enabling the mild synthetic manipulation of these heterocycles.
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Affiliation(s)
- Andrew J Neel
- Department of Process Research and Development , Merck & Co., Inc. , Rahway , New Jersey 07065 , United States
| | - Ralph Zhao
- Department of Process Research and Development , Merck & Co., Inc. , Rahway , New Jersey 07065 , United States
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7
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Roslan II, Ng KH, Gondal MA, Basheer C, Dastageer MA, Jaenicke S, Chuah GK. Visible Light-Mediated Coupling of Thioureas and 1,3-Dicarbonyls: Towards a Leaving Group-Free Synthesis of Aminothiazoles. Adv Synth Catal 2018. [DOI: 10.1002/adsc.201701565] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Irwan Iskandar Roslan
- Department of Chemistry; National University of Singapore; 3 Science Drive 3 Singapore 117543
| | - Kian-Hong Ng
- Department of Chemistry; National University of Singapore; 3 Science Drive 3 Singapore 117543
| | - Mohammed Ashraf Gondal
- Physics Department; King Fahd University of Petroleum & Minerals; Dhahran 31261 Saudi Arabia
| | - Chanbasha Basheer
- Chemistry Department; King Fahd University of Petroleum & Minerals; Dhahran 31261 Saudi Arabia
| | - Mohamed A. Dastageer
- Physics Department; King Fahd University of Petroleum & Minerals; Dhahran 31261 Saudi Arabia
| | - Stephan Jaenicke
- Department of Chemistry; National University of Singapore; 3 Science Drive 3 Singapore 117543
| | - Gaik-Khuan Chuah
- Department of Chemistry; National University of Singapore; 3 Science Drive 3 Singapore 117543
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