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Cha BK, Lee KH, Lee Y, Kim K. Optimization Method to Predict Optimal Noise Reduction Parameters for the Non-Local Means Algorithm Based on the Scintillator Thickness in Radiography. SENSORS (BASEL, SWITZERLAND) 2023; 23:9803. [PMID: 38139649 PMCID: PMC10747373 DOI: 10.3390/s23249803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2023] [Revised: 12/09/2023] [Accepted: 12/12/2023] [Indexed: 12/24/2023]
Abstract
The resulting image obtained from an X-ray imaging system depends significantly on the characteristics of the detector. In particular, when an X-ray image is acquired by thinning the detector, a relatively large amount of noise inevitably occurs. In addition, when a thick detector is used to reduce noise in X-ray images, blurring increases and the ability to distinguish target areas deteriorates. In this study, we aimed to derive the optimal X-ray image quality by deriving the optimal noise reduction parameters based on the non-local means (NLM) algorithm. The detectors used were of two thicknesses (96 and 140 μm), and images were acquired based on the IEC 62220-1-1:2015 RQA-5 protocol. The optimal parameters were derived by calculating the edge preservation index and signal-to-noise ratio according to the sigma value of the NLM algorithm. As a result, a sigma value of the optimized NLM algorithm (0.01) was derived, and this algorithm was applied to a relatively thin X-ray detector system to obtain appropriate noise level and spatial resolution data. The no-reference-based blind/referenceless image spatial quality evaluator value, which analyzes the overall image quality, was best when using the proposed method. In conclusion, we propose an optimized NLM algorithm based on a new method that can overcome the noise amplification problem in thin X-ray detector systems and is expected to be applied in various photon imaging fields in the future.
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Affiliation(s)
- Bo Kyung Cha
- Precision Medical Device Research Center, Korea Electrotechnology Research Institute (KERI), 111 Hanggaul-ro, Sangnok-gu, Ansan-si 15588, Republic of Korea; (B.K.C.); (K.-H.L.)
| | - Kyeong-Hee Lee
- Precision Medical Device Research Center, Korea Electrotechnology Research Institute (KERI), 111 Hanggaul-ro, Sangnok-gu, Ansan-si 15588, Republic of Korea; (B.K.C.); (K.-H.L.)
| | - Youngjin Lee
- Department of Radiological Science, Gachon University, 191 Hambangmoe-ro, Yeonsu-gu, Incheon 21936, Republic of Korea
| | - Kyuseok Kim
- Department of Biomedical Engineering, Eulji University, 553 Sanseong-daero, Sujeong-gu, Seongnam-si 13135, Republic of Korea
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Zheng Y, Frame E, Caravaca J, Gullberg GT, Vetter K, Seo Y. A generalization of the maximum likelihood expectation maximization (MLEM) method: Masked-MLEM. Phys Med Biol 2023; 68:10.1088/1361-6560/ad0900. [PMID: 37918026 PMCID: PMC10819675 DOI: 10.1088/1361-6560/ad0900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2023] [Accepted: 11/02/2023] [Indexed: 11/04/2023]
Abstract
Objective.In our previous work on image reconstruction for single-layer collimatorless scintigraphy, we developed the min-min weighted robust least squares (WRLS) optimization algorithm to address the challenge of reconstructing images when both the system matrix and the projection data are uncertain. Whereas the WRLS algorithm has been successful in two-dimensional (2D) reconstruction, expanding it to three-dimensional (3D) reconstruction is difficult since the WRLS optimization problem is neither smooth nor strongly-convex. To overcome these difficulties and achieve robust image reconstruction in the presence of system uncertainties and projection noise, we propose a generalized iterative method based on the maximum likelihood expectation maximization (MLEM) algorithm, hereinafter referred to as the Masked-MLEM algorithm.Approach.In the Masked-MLEM algorithm, only selected subsets ('masks') from the system matrix and the projection contribute to the image update to satisfy the constraints imposed by the system uncertainties. We validate the Masked-MLEM algorithm and compare it to the standard MLEM algorithm using experimental data obtained from both collimated and uncollimated imaging instruments, including parallel-hole collimated SPECT, 2D collimatorless scintigraphy, and 3D collimatorless tomography. Additionally, we conduct comprehensive Monte Carlo simulations for 3D collimatorless tomography to further validate the effectiveness of the Masked-MLEM algorithm in handling different levels of system uncertainties.Main results.The Masked-MLEM and standard MLEM reconstructions are similar in cases with negligible system uncertainties, whereas the Masked-MLEM algorithm outperforms the standard MLEM algorithm when the system matrix is an approximation. Importantly, the Masked-MLEM algorithm ensures reliable image reconstruction across varying levels of system uncertainties.Significance.With a good choice of system uncertainty and without requiring accurate knowledge of the actual system matrix, the Masked-MLEM algorithm yields more robust image reconstruction than the standard MLEM algorithm, effectively reducing the likelihood of erroneously reconstructing higher activities in regions without radioactive sources.
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Affiliation(s)
- Yifan Zheng
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA
- Department of Nuclear Engineering, University of California, Berkeley, CA 94720, USA
| | - Emily Frame
- Department of Nuclear Engineering, University of California, Berkeley, CA 94720, USA
| | - Javier Caravaca
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA
| | - Grant T. Gullberg
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA
| | - Kai Vetter
- Department of Nuclear Engineering, University of California, Berkeley, CA 94720, USA
- Applied Nuclear Physics Group, Lawrence Berkeley National Laboratory, Berkeley, CA 94502, USA
| | - Youngho Seo
- Department of Radiology and Biomedical Imaging, University of California, San Francisco, CA 94143, USA
- Department of Nuclear Engineering, University of California, Berkeley, CA 94720, USA
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Li L, Sun W, Guo C, Guo H, Lili L, Yu P. Mathematical model and nanoindentation properties of the claws of Cyrtotrachelus buqueti Guer (Coleoptera: Curculionidae). IET Nanobiotechnol 2022; 16:211-224. [PMID: 35619241 PMCID: PMC9353863 DOI: 10.1049/nbt2.12089] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2022] [Revised: 04/26/2022] [Accepted: 05/04/2022] [Indexed: 11/19/2022] Open
Abstract
Scanning electron microscopy (SEM) was used to observe the macroscopic, microscopic, and cross‐sectional structures of the claws of Cyrtotrachelus buqueti Guer (Coleoptera: Curculionidae), and a mathematical model of a claw was used to investigate the structure–function relationships. To improve the quality of the SEM images, a non‐local means (NLM) algorithm and an improved NLM algorithm were applied. After comparison and analysis of five classical edge‐detection algorithms, the boundaries of the structural features of the claw were extracted based on a B‐spline wavelet algorithm, and the results showed that the variable curvature of the beetle claw enhances its adhesion force and improves its strength. Adhesion models of the claw were established, and the mechanical properties of its biomaterials were measured using nanoindentation. Considering that the presence of water can affect the hardness and Young's modulus, both ‘dry’ and ‘wet’ samples were examined. For the dry samples, the hardness and Young's modulus were 0.197 ± 0.074 GPa and 1.105 ± 0.197 GPa, respectively, whereas the respective values for the wet samples were both lower at 0.071 ± 0.030 GPa and 0.693 ± 0.163 GPa. This study provides data that can inform the design of climbing robots.
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Affiliation(s)
- Longhai Li
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou, China
| | - Wei Sun
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou, China
| | - Ce Guo
- Institute of Bio-inspired Structure and Surface Engineering, College of Mechanical and Electrical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, China
| | - Huafeng Guo
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou, China
| | - Liu Lili
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou, China
| | - Ping Yu
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou, China
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Li L, Guo C, Xu S, Guo H, Yu P, Liu L, Tian J. Mathematical Model and microCT-Based Kinematic Analysis of the Rostrum Mouthparts in Cyrtotrachelus buqueti Guer (Coleoptera: Curculionidae). MICROSCOPY AND MICROANALYSIS : THE OFFICIAL JOURNAL OF MICROSCOPY SOCIETY OF AMERICA, MICROBEAM ANALYSIS SOCIETY, MICROSCOPICAL SOCIETY OF CANADA 2021; 27:860-877. [PMID: 33993901 DOI: 10.1017/s143192762100043x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
To uncover the chewing mechanism of Cyrtotrachelus buqueti Guer, a mathematical model was created and a kinematic analysis of its rostrum mouthparts was conducted for, to our knowledge, the first time. To reduce noise and improve the quality of scanning electron micrographs of the weevil's mouthparts, nonlocal means and integral nonlocal means algorithms were proposed. Additionally, based on a comparison and analysis of five classical edge detection algorithms, a multiscale edge detection algorithm based on the B-spline wavelet was used to obtain the boundaries of structural features. The least squares method was used to analyze the data of the mouthparts to fit the mathematical model and fitted curves were obtained using Gaussian equations. The results show that curvature and concave-convex variations of the weevil's mouthparts can highlight fluctuations in friction effects when it chews bamboo shoots, which is helpful in preventing debris from bamboo shoots or other debris from sticking to the mouthpart surfaces. Moreover, this paper highlights the utility of micro-computed tomography (microCT) for three-dimensional (3D) reconstruction and a flowchart is suggested. The reconstructed slices were 9.0 μm thick and an accurate 3D rendered model was obtained from a series of microCT slices. Finally, a real model of the rostrum mouthparts was analyzed using finite-element analysis. The results provide a biological template for the design of a novel bionic drilling mechanism.
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Affiliation(s)
- Longhai Li
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou221018, China
| | - Ce Guo
- Institute of Bio-inspired Structure and Surface Engineering, College of Mechanical and Electrical Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing210016, China
| | - Shun Xu
- Key Laboratory of Bionic Engineering (Ministry of Education, China), College of Biological and Agricultural Engineering, Jilin University, Changchun130025, China
| | - Huafeng Guo
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou221018, China
| | - Ping Yu
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou221018, China
| | - Lei Liu
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou221018, China
| | - Jing Tian
- School of Mechanical and Electrical Engineering, Xuzhou University of Technology, Xuzhou221018, China
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Hu D, Liu J, Lv T, Zhao Q, Zhang Y, Quan G, Feng J, Chen Y, Luo L. Hybrid-Domain Neural Network Processing for Sparse-View CT Reconstruction. IEEE TRANSACTIONS ON RADIATION AND PLASMA MEDICAL SCIENCES 2021. [DOI: 10.1109/trpms.2020.3011413] [Citation(s) in RCA: 16] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Zhang L, Zhao H, Ma W, Jiang J, Zhang L, Li J, Gao F, Zhou Z. Resolution and noise performance of sparse view X-ray CT reconstruction via Lp-norm regularization. Phys Med 2018; 52:72-80. [DOI: 10.1016/j.ejmp.2018.04.396] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/12/2018] [Revised: 03/28/2018] [Accepted: 04/25/2018] [Indexed: 10/28/2022] Open
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Shen C, Gonzalez Y, Chen L, Jiang SB, Jia X. Intelligent Parameter Tuning in Optimization-Based Iterative CT Reconstruction via Deep Reinforcement Learning. IEEE TRANSACTIONS ON MEDICAL IMAGING 2018; 37:1430-1439. [PMID: 29870371 PMCID: PMC5999035 DOI: 10.1109/tmi.2018.2823679] [Citation(s) in RCA: 44] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
Abstract
A number of image-processing problems can be formulated as optimization problems. The objective function typically contains several terms specifically designed for different purposes. Parameters in front of these terms are used to control the relative importance among them. It is of critical importance to adjust these parameters, as quality of the solution depends on their values. Tuning parameters are a relatively straight forward task for a human, as one can intuitively determine the direction of parameter adjustment based on the solution quality. Yet manual parameter tuning is not only tedious in many cases, but also becomes impractical when a number of parameters exist in a problem. Aiming at solving this problem, this paper proposes an approach that employs deep reinforcement learning to train a system that can automatically adjust parameters in a human-like manner. We demonstrate our idea in an example problem of optimization-based iterative computed tomography (CT) reconstruction with a pixel-wise total-variation regularization term. We set up a parameter-tuning policy network (PTPN), which maps a CT image patch to an output that specifies the direction and amplitude by which the parameter at the patch center is adjusted. We train the PTPN via an end-to-end reinforcement learning procedure. We demonstrate that under the guidance of the trained PTPN, reconstructed CT images attain quality similar or better than those reconstructed with manually tuned parameters.
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