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Bolibok P, Roszek K, Wiśniewski M. Chemical and Biochemical Approach to Make a Perfect Biocatalytic System on Carbonaceous Matrices. Methods Enzymol 2018; 609:221-245. [PMID: 30244791 DOI: 10.1016/bs.mie.2018.05.015] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Enzymatic processes are widely used in food industry, pharmacy, cosmetic and household chemistry, and medicine. However, the common and efficient application of the biological catalysts is limited by a number of factors that influence enzymes activity. One of the most frequent methods to improve the biocatalysts' properties is immobilization. This chapter presents a recent overview of our attempts to obtain the perfect biocatalytic system. The experimental approach, proposed in this chapter, includes the critical points like: the choice of adequate immobilization method, most suitable carrier, determination of enzyme kinetic parameters, stability, and toxicity of obtained systems. As carbon materials including graphene-derived materials offer unique properties and a plenty of different modifications, these parameters seem to be of decisive importance to understand chemistry of complex systems. Consideration of all the mentioned requirements lead us to the conclusion that graphene oxide could be the best candidate for support in perfect biocatalytic systems.
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Affiliation(s)
- Paulina Bolibok
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Katarzyna Roszek
- Department of Biochemistry, Faculty of Biology and Environmental Protection, Nicolaus Copernicus University in Toruń, Toruń, Poland
| | - Marek Wiśniewski
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Toruń, Poland.
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Rodriguez-Quijada C, Sánchez-Purrà M, de Puig H, Hamad-Schifferli K. Physical Properties of Biomolecules at the Nanomaterial Interface. J Phys Chem B 2018; 122:2827-2840. [DOI: 10.1021/acs.jpcb.8b00168] [Citation(s) in RCA: 45] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
| | - Maria Sánchez-Purrà
- Department of Engineering, University of Massachusetts, Boston, Massachusetts 02125, United States
| | - Helena de Puig
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
| | - Kimberly Hamad-Schifferli
- Department of Engineering, University of Massachusetts, Boston, Massachusetts 02125, United States
- Department of Mechanical Engineering, Massachusetts Institute of Technology, Cambridge, Massachusetts 02139, United States
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Bolibok P, Wiśniewski M, Roszek K, Terzyk AP. Controlling enzymatic activity by immobilization on graphene oxide. THE SCIENCE OF NATURE - NATURWISSENSCHAFTEN 2017; 104:36. [PMID: 28361348 PMCID: PMC5374183 DOI: 10.1007/s00114-017-1459-3] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/23/2016] [Revised: 03/19/2017] [Accepted: 03/22/2017] [Indexed: 12/27/2022]
Abstract
In this study, graphene oxide (GO) has been applied as a matrix for enzyme immobilization. The protein adsorption capacity of GO is much higher than of other large surface area carbonaceous materials. Its structure and physicochemical properties are reported beneficial also for enzymatic activity modifications. The experimental proof was done here that GO-based biocatalytic systems with immobilized catalase are modifiable in terms of catalyzed reaction kinetic constants. It was found that activity and stability of catalase, considered here as model enzyme, closely depend on enzyme/GO ratio. The changes in kinetic parameters can be related to secondary structure alterations. The correlation between enzyme/GO ratio and kinetic and structure parameters is reported for the first time and enables the conscious control of biocatalytic processes and their extended applications. The biological activity of obtained biocatalytic systems was confirmed in vitro by the use of functional test. The addition of immobilized catalase improved the cells' viability after they were exposed to hydrogen peroxide and tert-butyl-hydroperoxide used as source of reactive oxygen species.
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Affiliation(s)
- Paulina Bolibok
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland
| | - Marek Wiśniewski
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland.
- INVEST-TECH R&D Center, Plaska St. 32-34, 87-100, Toruń, Poland.
| | - Katarzyna Roszek
- Department of Biochemistry, Faculty of Biology and Environment Protection, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland
| | - Artur P Terzyk
- Faculty of Chemistry, Physicochemistry of Carbon Materials Research Group, Nicolaus Copernicus University in Toruń, Gagarin St. 7, 87-100, Toruń, Poland
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Mazurenko I, Monsalve K, Rouhana J, Parent P, Laffon C, Goff AL, Szunerits S, Boukherroub R, Giudici-Orticoni MT, Mano N, Lojou E. How the Intricate Interactions between Carbon Nanotubes and Two Bilirubin Oxidases Control Direct and Mediated O2 Reduction. ACS APPLIED MATERIALS & INTERFACES 2016; 8:23074-23085. [PMID: 27533778 DOI: 10.1021/acsami.6b07355] [Citation(s) in RCA: 60] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
Due to the lack of a valid approach in the design of electrochemical interfaces modified with enzymes for efficient catalysis, many oxidoreductases are still not addressed by electrochemistry. We report in this work an in-depth study of the interactions between two different bilirubin oxidases, (from the fungus Myrothecium verrucaria and from the bacterium Bacillus pumilus), catalysts of oxygen reduction, and carbon nanotubes bearing various surface charges (pristine, carboxylic-, and pyrene-methylamine-functionalized). The surface charges and dipole moment of the enzymes as well as the surface state of the nanomaterials are characterized as a function of pH. An original electrochemical approach allows determination of the best interface for direct or mediated electron transfer processes as a function of enzyme, nanomaterial type, and adsorption conditions. We correlate these experimental results to theoric voltammetric curves. Such an integrative study suggests strategies for designing efficient bioelectrochemical interfaces toward the elaboration of biodevices such as enzymatic fuel cells for sustainable electricity production.
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Affiliation(s)
- Ievgen Mazurenko
- Aix Marseille Univ, CNRS , BIP, Bioénergétique et Ingénierie des Protéines UMR7281, 31 chemin Joseph Aiguier 13402 Marseille Cedex 20, France
| | - Karen Monsalve
- Aix Marseille Univ, CNRS , BIP, Bioénergétique et Ingénierie des Protéines UMR7281, 31 chemin Joseph Aiguier 13402 Marseille Cedex 20, France
| | - Jad Rouhana
- Centre de Recherche Paul Pascal, UPR 8641, CNRS, Bordeaux University , 33600 Pessac, France
| | - Philippe Parent
- Aix Marseille Université, CNRS , CINaM UMR 7325, 13288 Marseille, France
| | - Carine Laffon
- Aix Marseille Université, CNRS , CINaM UMR 7325, 13288 Marseille, France
| | - Alan Le Goff
- Université Grenoble Alpes , DCM UMR 5250, 38000 Grenoble, France
| | - Sabine Szunerits
- Institute of Electronics, Microelectronics and Nanotechnology (IEMN, UMR CNRS 8520) , , Université Lille 1, Cité Scientifique Avenue Poincaré-BP60069, 59652 Villeneuve d'Ascq, France
| | - Rabah Boukherroub
- Institute of Electronics, Microelectronics and Nanotechnology (IEMN, UMR CNRS 8520) , , Université Lille 1, Cité Scientifique Avenue Poincaré-BP60069, 59652 Villeneuve d'Ascq, France
| | - Marie-Thérèse Giudici-Orticoni
- Aix Marseille Univ, CNRS , BIP, Bioénergétique et Ingénierie des Protéines UMR7281, 31 chemin Joseph Aiguier 13402 Marseille Cedex 20, France
| | - Nicolas Mano
- Centre de Recherche Paul Pascal, UPR 8641, CNRS, Bordeaux University , 33600 Pessac, France
| | - Elisabeth Lojou
- Aix Marseille Univ, CNRS , BIP, Bioénergétique et Ingénierie des Protéines UMR7281, 31 chemin Joseph Aiguier 13402 Marseille Cedex 20, France
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Celebanska A, Opallo M. Layer-by-Layer Gold-Ceramic Nanoparticulate Electrodes for Electrocatalysis. ChemElectroChem 2016. [DOI: 10.1002/celc.201600288] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Anna Celebanska
- Institute of Physical Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
| | - Marcin Opallo
- Institute of Physical Chemistry; Polish Academy of Sciences; Kasprzaka 44/52 01-224 Warsaw Poland
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Salehniya H, Amiri M, Mansoori Y. Positively charged carbon nanoparticulate/sodium dodecyl sulphate bilayer electrode for extraction and voltammetric determination of ciprofloxacin in real samples. RSC Adv 2016. [DOI: 10.1039/c6ra03170f] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022] Open
Abstract
The modified electrode was prepared using a layer-by-layer method with functionalized CNPs and SDS. The ability of modified electrode to adsorb ciprofloxacin was investigated. Ciprofloxacin was analyzed in real samples.
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Affiliation(s)
- Haneie Salehniya
- Department of Chemistry
- University of Mohaghegh Ardabili
- Ardabil
- Iran
| | - Mandana Amiri
- Department of Chemistry
- University of Mohaghegh Ardabili
- Ardabil
- Iran
| | - Yaghoub Mansoori
- Department of Chemistry
- University of Mohaghegh Ardabili
- Ardabil
- Iran
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Celebanska A, Filipiak MS, Lesniewski A, Jubete E, Opallo M. Nanocarbon electrode prepared from oppositely charged nanoparticles and nanotubes for low-potential thiocholine oxidation. Electrochim Acta 2015. [DOI: 10.1016/j.electacta.2015.06.143] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
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9
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Celebanska A, Lesniewski A, Niedziolka-Jonsson J, Kominiak M, Nogala W, Wittstock G, Opallo M. Carbon Nanoparticulate Film Electrode Prepared by Electrophoretic Deposition. Electrochemical oxidation of Thiocholine and Topography Imaging with SECM Equipment in Dry Conditions. Electrochim Acta 2014. [DOI: 10.1016/j.electacta.2014.08.002] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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10
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de Poulpiquet A, Ciaccafava A, Lojou E. New trends in enzyme immobilization at nanostructured interfaces for efficient electrocatalysis in biofuel cells. Electrochim Acta 2014. [DOI: 10.1016/j.electacta.2013.07.133] [Citation(s) in RCA: 71] [Impact Index Per Article: 7.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
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11
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Lawrence K, Baker CL, James TD, Bull SD, Lawrence R, Mitchels JM, Opallo M, Arotiba OA, Ozoemena KI, Marken F. Functionalized Carbon Nanoparticles, Blacks and Soots as Electron-Transfer Building Blocks and Conduits. Chem Asian J 2014; 9:1226-41. [DOI: 10.1002/asia.201301657] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/13/2013] [Indexed: 11/05/2022]
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12
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Karczmarczyk A, Celebanska A, Nogala W, Sashuk V, Chernyaeva O, Opallo M. Electrocatalytic glucose oxidation at gold and gold-carbon nanoparticulate film prepared from oppositely charged nanoparticles. Electrochim Acta 2014. [DOI: 10.1016/j.electacta.2013.11.049] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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13
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Ciaurriz P, Bravo E, Hamad-Schifferli K. Effect of architecture on the activity of glucose oxidase/horseradish peroxidase/carbon nanoparticle conjugates. J Colloid Interface Sci 2014; 414:73-81. [DOI: 10.1016/j.jcis.2013.09.039] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2013] [Revised: 09/14/2013] [Accepted: 09/17/2013] [Indexed: 10/26/2022]
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Szot K, de Poulpiquet A, Ciaccafava A, Marques H, Jönsson-Niedziolka M, Niedziolka-Jönsson J, Marken F, Lojou E, Opallo M. Carbon nanoparticulate films as effective scaffolds for mediatorless bioelectrocatalytic hydrogen oxidation. Electrochim Acta 2013. [DOI: 10.1016/j.electacta.2013.08.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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15
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Szot K, Jönsson-Niedziolka M, Rozniecka E, Marken F, Opallo M. Direct electrochemistry of adsorbed proteins and bioelectrocatalysis at film electrode prepared from oppositely charged carbon nanoparticles. Electrochim Acta 2013. [DOI: 10.1016/j.electacta.2012.10.168] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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16
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Electrochemistry of bilirubin oxidase and its use in preparation of a low cost enzymatic biofuel cell based on a renewable composite binder chitosan. Electrochim Acta 2013. [DOI: 10.1016/j.electacta.2012.09.054] [Citation(s) in RCA: 31] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
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17
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Lawrence K, Nishimura T, Haffenden P, Mitchels JM, Sakurai K, Fossey JS, Bull SD, James TD, Marken F. Pyrene-anchored boronic acid receptors on carbon nanoparticle supports: fluxionality and pore effects. NEW J CHEM 2013. [DOI: 10.1039/c3nj00017f] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
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Flexer V, Brun N, Destribats M, Backov R, Mano N. A novel three-dimensional macrocellular carbonaceous biofuel cell. Phys Chem Chem Phys 2013; 15:6437-45. [DOI: 10.1039/c3cp50807b] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Xia F, Pan M, Mu S, Jones MD, Wolverson D, Marken F. Chitosan-Based Hydrothermal Nanocarbon: Core-Shell Characteristics and Composite Electrodes. ELECTROANAL 2012. [DOI: 10.1002/elan.201200224] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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21
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Lawrence K, Watkins JD, James TD, Taylor JE, Bull SD, Nelson GW, Foord JS, Long YT, Marken F. Dioctylamine-Sulfonamide-Modified Carbon Nanoparticles as High Surface Area Substrates for Coenzyme Q10Lipid Electrochemistry. ELECTROANAL 2012. [DOI: 10.1002/elan.201200121] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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22
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Activation of laccase bioelectrocatalysis of O2 reduction to H2O by carbon nanoparticles. J Electroanal Chem (Lausanne) 2012. [DOI: 10.1016/j.jelechem.2011.12.012] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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23
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Xia F, Pan M, Mu S, Xiong Y, Edler KJ, Idini I, Jones MD, Tsang SC, Marken F. Hydrothermal core–shell carbon nanoparticle films: thinning the shell leads to dramatic pH response. Phys Chem Chem Phys 2012; 14:15860-5. [DOI: 10.1039/c2cp42659e] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
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Szot K, Lynch RP, Lesniewski A, Majewska E, Sirieix-Plenet J, Gaillon L, Opallo M. The effect of linker of electrodes prepared from sol–gel ionic liquid precursor and carbon nanoparticles on dioxygen electroreduction bioelectrocatalysis. Electrochim Acta 2011. [DOI: 10.1016/j.electacta.2011.03.139] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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Celebanska A, Lesniewski A, Paszewski M, Jonsson-Niedziolka M, Niedziolka-Jonsson J, Opallo M. Gold three dimensional film electrode prepared from oppositely charged nanoparticles. Electrochem commun 2011. [DOI: 10.1016/j.elecom.2011.08.051] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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26
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Recent Developments of Nanostructured Electrodes for Bioelectrocatalysis of Dioxygen Reduction. ACTA ACUST UNITED AC 2011. [DOI: 10.1155/2011/947637] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Abstract
The recent development of nanostructured electrodes for bioelectrocatalytic dioxygen reduction catalysed by two copper oxidoreductases, laccase and bilirubin oxidase, is reviewed. Carbon-based nanomaterials as carbon nanotubes or carbon nanoparticles are frequently used for electrode modification, whereas there are only few examples of biocathodes modified with metal or metal oxide nanoparticles. These nanomaterials are adsorbed on the electrode surface or embedded in multicomponent film. The nano-objects deposited act as electron shuttles between the enzyme and the electrode substrate providing favourable conditions for mediatorless bioelectrocatalysis.
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Mediatorless bioelectrocatalysis of dioxygen reduction at indium-doped tin oxide (ITO) and ITO nanoparticulate film electrodes. Electrochim Acta 2011. [DOI: 10.1016/j.electacta.2011.07.095] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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28
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Film electrode prepared from oppositely charged silicate submicroparticles and carbon nanoparticles for selective dopamine sensing. Biosens Bioelectron 2011; 26:4417-22. [DOI: 10.1016/j.bios.2011.04.054] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2011] [Revised: 04/27/2011] [Accepted: 04/28/2011] [Indexed: 11/15/2022]
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Szot K, Jönsson-Niedziolka M, Palys B, Niedziolka-Jönsson J. One-step electrodeposition of carbon–silicate sponge assisted by a three-phase junction for efficient bioelectrocatalysis. Electrochem commun 2011. [DOI: 10.1016/j.elecom.2011.03.011] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
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30
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Niedziolka-Jonsson J, Jonsson-Niedziolka M, Nogala W, Palys B. Electrosynthesis of thin sol–gel films at a three-phase junction. Electrochim Acta 2011. [DOI: 10.1016/j.electacta.2011.01.024] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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31
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Jönsson-Niedziolka M, Kaminska A, Opallo M. Pyrene-functionalised single-walled carbon nanotubes for mediatorless dioxygen bioelectrocatalysis. Electrochim Acta 2010. [DOI: 10.1016/j.electacta.2010.07.101] [Citation(s) in RCA: 50] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
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