Electrochemical and spectroscopic insights into the mechanisms of bidirectional microbe-electrode electron transfer in Geobacter soli biofilms

Chlorophyll a acts as a natural photosensitizer to drive nitrate reduction in nonphotosynthetic microorganisms

With the death and decomposition of widely distributed photosynthetic organisms, free natural pigments are often detected in surface water, sediment and soil. Whether free pigments can act as photosensitizers to drive biophotoelectrochemical metabolism in nonphotosynthetic microorganisms has not been reported. In this work, we provide direct evidence for the photoelectrophic relationship between extracellular chlorophyll a (Chl a) and nonphotosynthetic microorganisms. The results show that 10 μg of Chl a can produce significant photoelectrons (∼0.34 A/cm2) upon irradiation to drive nitrate reduction in Shewanella oneidensis. Chl a undergoes structural changes during the photoelectric process, thus the ability of Chl a to generate a photocurrent decreases gradually with increasing illumination time. These changes are greater in the presence of microorganisms than in the absence of microorganisms. Photoelectron transport from Chl a to S. oneidensis occurs through a direct pathway involving the cytochromes MtrA, MtrB, MtrC and CymA but not through an indirect pathway involving riboflavin. These findings reveal a novel photoelectrotrophic linkage between natural photosynthetic pigments and nonphototrophic microorganisms, which has important implications for the biogeochemical cycle of nitrogen in various natural environments where Chl a is distributed.

Towards rapid formation of electroactive biofilm: insights from thermodynamics and electric field manipulation

Electroactive biofilm (EAB) has garnered significant attention due to its effectiveness in pollutant remediation, electricity generation, and chemical synthesis. However, achieving precise control over the rapid formation of EAB presents challenges for the practical implementation of bioelectrochemical technology. In this study, we investigated the regulation of EAB formation by manipulating applied electric potential. We developed a modified XDLVO model for the applied electric field and quantitatively assessed the feasibility of existing rapid formation strategies for EAB. Our results revealed that electrostatic (EL) force significantly influenced EAB formation in the presence of the applied electric field, with the potential difference between the electrode and the microbial solution being the primary determinant of EL force. Compared to -0.2 V and 0 V vs.Ag/AgCl, EAB exhibited the highest electrochemical performance at 0.2 V vs.Ag/AgCl, with a maximum current density of 6.044 ± 0.10 A/m2, surpassing that at -0.2 V vs.Ag/AgCl and 0 V vs.Ag/AgCl by 1.73 times and 1.31 times, respectively. Furthermore, EAB demonstrated the highest biomass accumulation, measuring a thickness of 25 ± 2 μm at 0.2 V vs. Ag/AgCl, representing increases of 1.67 and 1.25 times compared to -0.2 V vs.Ag/AgCl and 0 V vs.Ag/AgCl, respectively. The strong electrostatic attraction under the anodic potential promoted the formation of a monolayer of biofilm. Additionally, the hydrophilicity and hydrophobicity of the biofilm were altered following inversion culture. The Lewis acid-base (AB) attraction offset the electrostatic repulsion caused by negative charges, it is beneficial for the formation of biofilms. This study, for the first time, elucidated the difference in the formation of cathode and anode biofilm from a thermodynamic perspective in the context of electric field introduction, laying the theoretical foundation for the directional regulation of the rapid formation of typical electroactive biofilms.

Biological Self-Assembled Transmembrane Electron Conduits for High-Efficiency Ammonia Production in Microbial Electrosynthesis

Usually, CymA is irreplaceable as the electron transport hub in Shewanella oneidensis MR-1 bidirectional electron transfer. In this work, biologically self-assembled FeS nanoparticles construct an artificial electron transfer route and implement electron transfer from extracellular into periplasmic space without CymA involvement, which present similar properties to type IV pili. Bacteria are wired up into a network, and more electron transfer conduits are activated by self-assembled transmembrane FeS nanoparticles (electron conduits), thereby substantially enhancing the ammonia production. In this study, we achieved an average NH4+-N production rate of 391.8 μg·h-1·L reactor-1 with the selectivity of 98.0% and cathode efficiency of 65.4%. Additionally, the amide group in the protein-like substances located in the outer membrane was first found to be able to transfer electrons from extracellular into intracellular with c-type cytochromes. Our work provides a new viewpoint that contributes to a better understanding of the interconnections between semiconductor materials and bacteria and inspires the exploration of new electron transfer chain components.

Bidirectional extracellular electron transfer pathways of Geobacter sulfurreducens biofilms: Molecular insights into extracellular polymeric substances

The basis for bioelectrochemical technology is the capability of electroactive bacteria (EAB) to perform bidirectional extracellular electron transfer (EET) with electrodes, i.e. outward- and inward-EET. Extracellular polymeric substances (EPS) surrounding EAB are the necessary media for EET, but the biochemical and molecular analysis of EPS of Geobacter biofilms on electrode surface is largely lacked. This study constructed Geobacter sulfurreducens-biofilms performing bidirectional EET to explore the bidirectional EET mechanisms through EPS characterization using electrochemical, spectroscopic fingerprinting and proteomic techniques. Results showed that the inward-EET required extracellular redox proteins with lower formal potentials relative to outward-EET. Comparing to the EPS extracted from anodic biofilm (A-EPS), the EPS extracted from cathodic biofilm (C-EPS) exhibited a lower redox activity, mainly due to a decrease of protein/polysaccharide ratio and α-helix content of proteins. Furthermore, less cytochromes and more tyrosine- and tryptophan-protein like substances were detected in C-EPS than in A-EPS, indicating a diminished role of cytochromes and a possible role of other redox proteins in inward-EET. Proteomic analysis identified a variety of redox proteins including cytochrome, iron-sulfur clusters-containing protein, flavoprotein and hydrogenase in EPS, which might serve as an extracellular redox network for bidirectional EET. Those redox proteins that were significantly stimulated in A-EPS and C-EPS might be essential for outward- and inward-EET and warranted further research. This work sheds light on the mechanism of bidirectional EET of G. sulfurreducens biofilms and has implications in improving the performance of bioelectrochemical technology.

Application of dissimilatory iron-reducing bacteria for the remediation of soil and water polluted with chlorinated organic compounds: Progress, mechanisms, and directions

Chlorinated organic compounds are widely used as solvents, but they are pollutants that can have adverse effects on the environment and human health. Dissimilatory iron-reducing bacteria (DIRB) such as Shewanella and Geobacter have been applied to treat a wide range of halogenated organic compounds due to their specific biological properties. Until now, there has been no systematic review on the mechanisms of direct or indirect degradation of halogenated organic compounds by DIRB. This work summarizes the discussion of DIRB's ability to enhance the dechlorination of reaction systems through different pathways, both biological and biochemical. For biological dechlorination, some DIRB have self-dechlorination capabilities that directly dechlorinate by hydrolysis. Adjustment of dechlorination genes through genetic engineering can improve the dechlorination capabilities of DIRB. DIRB can also adjust the capacity for the microbial community to dechlorinate and provide nutrients to enhance the expression of dechlorination genes in other bacteria. In biochemical dechlorination, DIRB bioconverts Fe(III) to Fe(II), which is capable of dichlorination. On this basis, the DIRB-driven Fenton reaction can efficiently degrade chlorinated organics by continuously maintaining anoxic conditions to generate Fe(II) and oxic conditions to generate H2O2. DIRB can drive microbial fuel cells due to their electroactivity and have a good dechlorination capacity at low levels of energy consumption. The contribution of DIRB to the removal of pesticides, antibiotics and POPs is summarized. Then the DIRB electron transfer mechanism is discussed, which is core to their ability to dechlorinate. Finally, the prospect of future work on the removal of chlorine-containing organic pollutants by DIRB is presented, and the main challenges and further research directions are suggested.

Enhancing biocathode denitrification performance with nano-Fe3O4 under polarity period reversal

The presence of excessive concentrations of nitrate poses a threat to both the environment and human health, and the bioelectrochemical systems (BESs) are attractive green technologies for nitrate removal. However, the denitrification efficiency in the BESs is still limited by slow biofilm formation and nitrate removal. In this work, we demonstrate the efficacy of novel combination of magnetite nanoparticles (nano-Fe3O4) with the anode-cathode polarity period reversal (PPR-Fe3O4) for improving the performance of BESs. After only two-week cultivation, the highest cathodic current density (7.71 ± 1.01 A m-2) and NO3--N removal rate (8.19 ± 0.97 g m-2 d-1) reported to date were obtained in the PPR-Fe3O4 process (i.e., polarity period reversal with nano-Fe3O4 added) at applied working voltage of -0.2 and -0.5 V (vs Ag/AgCl) under bioanodic and biocathodic conditions, respectively. Compared with the polarity reversal once only process, the PPR process (i.e., polarity period reversal in the absence of nano-Fe3O4) enhanced bioelectroactivity through increasing biofilm biomass and altering microbial community structure. Nano-Fe3O4 could enhance extracellular electron transfer as a result of promoting the formation of extracellular polymers containing Fe3O4 and reducing charge transfer resistance of bioelectrodes. This work develops a novel biocathode denitrification strategy to achieve efficient nitrate removal after rapid cultivation.

Enhancing sludge methanogenesis with changed micro-environment of anaerobic microorganisms by Fenton iron mud

Conductive materials have been demonstrated to enhance sludge methanogenesis, but few researches have concentrated on the interaction among conductive materials, microorganisms and their immediate living environment. In this study, Fenton iron mud with a high abundance of Fe(III) was recycled and applied in anaerobic reactors to promote anaerobic digestion (AD) process. The results show that the primary content of extracellular polymeric substances (EPS) such as polysaccharides and proteins increased significantly, possibly promoting microbial aggregation. Furthermore, with the increment of redox mediators including humic substances in EPS and Fe(III) introduced by Fenton iron mud, the direct interspecies electron transfer (DIET) between methanogens and interacting bacteria could be accelerated, which enhanced the rate of methanogenesis in anaerobic digestion (35.21 ± 4.53% increase compared to the control). The further analysis of the anaerobic microbial community confirmed the fact that Fenton iron mud enriched functional microorganisms, such as the abundance of CO2-reducing (e.g. Chloroflexi) and Fe(III)-reducing bacteria (e.g., Tepidimicrobium), thereby expediting the electron transfer reaction in the AD process via microbial DIET and dissimilatory iron reduction (DIR). This work will make it possible for using the recycled hazardous material - Fenton iron mud to improve the performance of anaerobic granular sludge during methanogenesis.

Degradation and solid-liquid distribution of antibiotics in microbial electrolysis cells treating sewage sludge: Effects of temperature and applied voltage

The microbial electrolysis cell (MEC) is a promising technology for antibiotic removal in sewage sludge. Temperature and voltage are key operating factors, but information about their effects on antibiotic degradation in MECs is still limited. Therefore, the effects of the temperature and applied voltage on the degradation and solid-liquid distribution of antibiotics in MECs treating sewage sludge were investigated. The results showed that the thermophilic (55 °C) MEC (T-MEC) at 0.8 V achieved the highest total antibiotic removal efficiency of 58.7 % due to the increase in bioelectrochemical activity for anodes and microbial activity in suspended sludge. The solid-liquid migration of antibiotics was facilitated, which had a significant positive correlation with antibiotic removal. Biodegradation was the rate-limiting step for the removal of fluoroquinolones, which had the highest levels in sludge. Geobacter and Thermincola were dominant bacteria in the anode biofilms of mesophilic (37 °C) MECs (M-MECs) and T-MECs, respectively.

Employing conductive carrier for establishing spontaneous microbial galvanic cell and accelerating denitrification

It is well-known that metal corrosion is accelerated by formation of galvanic cell. In this study, we reported the acceleration of denitrification by using conductive carrier through formation of microbial galvanic cell (MGC). Electrically conductive graphite plate (GP) was used as biofilm carrier and compared with the non-conductive polypropylene (PP) plate carrier. Cyclic voltametric analyses showed that biofilms with bidirectional electron transfer functions of bioelectrochemical denitrification (BEDN) and acetate oxidation could be enriched spontaneously onto the GP carrier, hinting the establishment of MGC. Further analysis using differential pulse voltammetry revealed that the redox mediator related to extracellular electron transfer was detected in both media of the GP and PP carrier. Microbial community analysis showed that the biofilms in both GP and PP carrier had identical microbial composition but varied in abundance. The genus of Comamonas, Pseudomonas, Paracoccus and Thauera were the dominance of electroactive denitrifiers responsible for BEDN in both the GP and PP carrier. The GP carrier had a 75.9% higher abundant enrichment of electroactive denitrifiers than the PP carrier. Denitrification performance analyses showed that the GP carrier had a denitrification rate constant (k_DN) of 1.25 and 2.66 h^-1 at 15 °C and 30 °C, respectively, which was nearly 76.1% and 92.7% higher than the non-conductive PP carrier with corresponding values of about 0.71 and 1.38 h^-1. Further, the result of conductive carrier accelerating denitrification was confirmed in scaled-up denitrification bioreactors with volume of 104 L using brush-like biofilm carriers. The acceleration of denitrification was attributed to the spontaneously established MGC, which promoted the direct and mediated electron transfer of the electroactive denitrifiers grown onto the conductive carriers and speeded up the BEDN. The result of this study demonstrated that the BEDN could be integrated to traditional biological denitrification system to accelerate denitrification in the form of MGC by simply employment of conductive carrier.

Extracellular electron uptake for CO2 fixation by Rhodopseudomonas palustris during electro-cultivation in darkness

As a vital part of the global carbon cycle, photosynthesis helps in fixing CO₂ to produce diverse biomass. However, over-reliance on optical density results in inadequate photosynthesis under limited light sources. The coupling of extracellular respiration and photosynthetic chain via the quinone pool provides a possibility for electrically driven photosynthesis in darkness, which is not well understood. In this study, CO₂ fixation of photosynthetic bacteria Rhodopseudomonas palustris was enhanced in the dark via extracellular electron uptake from the electrode at -0.4 V. The copy number of R. palustris increased by 35 folds during 28 days of operation, accompanied by the increase of ATP content, NADH/NAD⁺, and NADPH/NADP⁺ of cells. Especially, the activity of Rubisco, the key enzyme of the Calvin cycle, increased by 28 % during electro-cultivation. Accordingly, the electrochemical activity of R. palustris was found to increase, which might be attributed to the structural modification of protein-like substances due to the enhanced proton-coupled electron transfer (PCET) process in electro-cultivation, which was further confirmed by in situ Fourier transform infrared spectroscopy and kinetic isotope effect tests. This study indicated that extracellular respiration could be electrostimulated via PCET to maintain photosynthesis in R. palustris in the dark.

Biochar facilitates ferrihydrite reduction by Shewanella oneidensis MR-1 through stimulating the secretion of extracellular polymeric substances

Biochar can mediate extracellular electron transfer (EET) of Shewanella oneidensis MR-1 and subsequently facilitate dissimilatory reduction of iron(III) minerals. Previous studies mainly focused on the interaction of biochar and membrane cytochrome complexes to reveal the mediating mechanisms between biochar and S. oneidensis MR-1. However, the influence of biochar on the production and activity of extracellular polymeric substances (EPS) has long been neglected, despite the fact that EPS are commonly exudated by S. oneidensis MR-1 and can participate in a variety of electron transfer processes due to their redox activity. Here, we performed a series of microbial ferrihydrite reduction experiments in combination with electrochemical voltametric and impedance analyses to investigate the role of biochar in the formation and transformation of cell EPS during EET. Results showed that the added biochar not only functioned as an electron shuttle facilitating electron transfer, but also induced the secretion of five times more EPS by S. oneidensis MR-1, leading to a 1.4-fold faster ferrihydrite reduction in comparison with biochar-free setups. We further extracted the secreted EPS and found that the proportion of redox-active exoproteins was significantly (p < 0.05) increased in the EPS and resulted in a higher electron exchange capacity in secreted EPS. Such increased exoprotein content also induced a higher ratio of exoprotein to exopolysaccharide, which largely dropped diffusion and electron transfer impedance of EPS to 1.1 and 18 Ω, respectively, and accelerated the EET and thus the ferrihydrite reduction. Overall, our findings revealed the interactions between biochar and EPS matrices, which could potentially play a critical role in EET processes in both environmental or biotechnological systems.

Autotrophic nitrate reduction to ammonium via reverse electron transfer in Geobacter dominated biofilm

Geobacter dominated electroactive biofilms (EABs) have been demonstrated to perform bidirectional extracellular electron transfer (EET) in bioelectrochemical systems, but it is largely unknown when nitrate is the electron acceptor at the cathode. If reverse EET occurs on biocathode, this EAB has to perform dissimilatory nitrate reduction to ammonia (DNRA) rather than denitrification according to genomes. Here, we have proven the feasibility of reverse bioelectron transfer in EAB, achieving a DNRA efficiency up to 93 ± 3% and high Faraday efficiency of 74 ± 1%. Constant current was found to be more effective than constant potential to maintain Geobacter on the cathode, which highly determines this electrotrophic respiration. The prevalent DNRA at constant current surpassed denitrification, demonstrated by the reverse tendencies of DNRA (nrfA) and denitrification (nirS and nirK) gene transcription. Metatranscriptomics further revealed the possible electron uptake mechanisms by which the outer membrane (OmcZ and OmcB) and periplasmic cytochromes (PpcB and PpcD) may be involved. These findings extend our understanding of the bidirectional electron transfer and advance the applications of EABs.

Moisture migration driven by the electric field causes the directional differentiation of compost maturity

Electric field-assisted aerobic composting (EAC) has been recently believed as a novel and effective process for the resource utilization of organic solid waste. However, the effect of electric field in composting process needs to be further clarified. Herein, moisture migration and compost maturity along electric-field-direction (from anode to cathode) in EAC was first to be explored. It was found that moisture content and compost maturity changed regularly from anode to cathode. At the end of composting, the moisture content of S3 (cathodic zone) was 30% and 62% higher than that of S2 (middle zone) and S1 (anodic zone), respectively. The germination index (a key parameter for compost maturity) in S3 (138.92%) was significantly higher than that of S2 (104.98%) and S1 (84.45%). However, temperatures in S3 were lower than that of S1 and S2, indicating the moisture content played a more important role than temperature for compost maturity in EAC. Furthermore, the microbial activities in S3 were also higher than that of S1 and S2, supporting the trend of compost maturity. This pioneering study demonstrates the electric field can drive moisture gradient migration to control the directional differentiation of compost maturity, showing a great application potential in aerobic composting.

The anode is more beneficial to the advanced treatment of wastewater containing antibiotics by three-dimensional electro-biofilm reactor: Degradation, mechanism and optimization

The three-dimensional electrode biological aerated filter (3DE-BAF) has the potential to overcome inherent limitations of conventional electrochemical and biofilm methods. Electrochemical means could enhance the performance and sustainability of biofilm technologies and stimulate the spread of new applications in (waste) water treatment. This paper describes the construction and performance of 3DE-BAF in the treatment of simulated wastewater represented by tetracycline (TC). This is followed by a discussion of electrode performance, the electron transport mechanism and the electrode's effect on the biological community of 3D-EBAF. Given the gap between experimental studies and practical applications, the enlarged anode 3DE-BAF named 3DEAE-BAF reactor was applied with good results to duck farm wastewater. This study could provide guidance as to developing new methods to construct a highly stable 3DE-BAF. The paper concludes that improved 3DE-BAF technology is promising for advanced treatment of livestock wastewater containing antibiotics.

Electrotrophy: Other microbial species, iron, and electrodes as electron donors for microbial respirations

Electrotrophy, the growth of microbes on extracellular electron donors, drives important biogeochemical cycles and has practical applications. Studies of Fe(II)-based electrotrophy have provided foundational cytochrome-based mechanistic models for electron transport into cells. Direct electron uptake from other microbial species, Fe(0), or cathodes is of intense interest due to its potential roles in the production and anaerobic oxidation of methane, corrosion, and bioelectrochemical technologies. Other cells or Fe(0) can serve as the sole electron donor supporting the growth of several Geobacter and methanogen strains that are unable to use H₂ as an electron donor, providing strong evidence for electrotrophy. Additional evidence for electrotrophy in Geobacter strains and Methanosarcina acetivorans is a requirement for outer-surface c-type cytochromes. However, in most instances claims for electrotrophy in anaerobes are based on indirect inference and the possibility that H₂ is actually the electron donor supporting growth has not been rigorously excluded.

Pushing the methodological envelope in understanding the photo/electrosynthetic materials-microorganism interface

Biohybrid photo/electrosynthetic systems synergize microbial metabolic pathways and inorganic materials to generate the fuels and chemicals to power our society. They aim to combine the strengths of product selectivity from biological cells and efficient charge generation and light absorption of inorganic materials. However crucial mechanistic questions still remain. In this review we address significant knowledge gaps that must be closed and recent efforts to do so to push biohybrid systems closer to applicability. In particular, we focus on noteworthy advances that have recently been made in applying state-of-the-art analytical spectroscopic, electrochemical, and microelectronic techniques to help pinpoint key complexities of the microbe-materials interface. We discuss the basic function of these techniques, how they have been translated over to study biohybrid systems, and which key insights and implications have been extracted. Finally, we delve into the key advances necessary for the design of next generation biohybrid energy conversion systems.

Biochar boosts dark fermentative H2 production from sugarcane bagasse by selective enrichment/colonization of functional bacteria and enhancing extracellular electron transfer

The influence of biochar (BC) on anerobic digestion (AD) of organic wastes have been widely studied. However, the effect of BC on rate-limiting step during AD of lignocellulosic waste, i.e. the hydrolysis and acidogenesis step, is rarely studied and the underlying mechanisms have not been investigated. In this study, the benefits of BC with respect to dark fermentative hydrogen production were explored in a fermentation system by a heat-shocked consortium from sewage sludge (SS) with pretreated sugarcane bagasse (PSCB) as carbon source. The results showed that biochar boosted biohydrogen production by 317.1% through stimulating bacterial growth, improving critical enzymatic activities, manipulating the ratio of NADH/NAD⁺ and enhancing electron transfer efficiency of fermentation system. Furthermore, cellulolytic Lachnospiraceae was efficiently enriched and electroactive bacteria were selectively colonized and the ecological niche was formed on the surface of biochar. Synergistic effect between functional bacteria and extracellular electron transfer (EET) in electroactive bacteria were assumed to be established and maintained by biochar amendment. This study shed light on the underlying mechanisms of improved performance of biohydrogen production from lignocellulosic waste during mesophilic dark fermentation by BC supplementation.

Augmentation of chloramphenicol degradation by Geobacter-based biocatalysis and electric field

Electroactive microorganisms and electrochemical technologies have been separately used for environmental remediation such as antibiotics removal, yet the efficiency of coupling these two methods for chlorinated antibiotics removal is poorly known. Here we tested the synergy of Geobacter sulfurreducens PCA, an electroactive bacteria, and an electrical field, on chloramphenicol removal. Removal is increased two-fold by increasing the temperature from 30°C to 37°C. The cyclic voltammograms and chronoamperometry tests demonstrated that G. sulfurreducens PCA catalyzed chloramphenicol chemical reduction with electrode as excusive electron donor. A critical voltage, -0.6 to -0.5 V vs. Ag/AgCl, was discovered for chloramphenicol degradation with an increase of removal rate about 2.62-folds, from 31.06% to 81.41%. Combined removal with both G. sulfurreducens PCA and an electrical field increased the apparent rate constant and reached 82.77% removal at -0.5 V. Specially, the combined removal at -0.5 V even presented more robust removal efficiency compared to -0.6 V (78.64%) without G. sulfurreducens PCA. Mass spectrometry of degradation products indicates the reduction of nitro into amine groups, and dechlorination into less toxic compounds. Overall, combined biocatalysis and an electrical field is a promising method to remove antibiotics from polluted environments.

Microbial Electrochemical Oxidation of Anaerobic Digestion Effluent From Treating HTC Process Water

Hydrothermal carbonization (HTC) is a promising technology for chemical and material synthesis. However, HTC produces not only valuable solid coal-materials but also yields process water (PW) with high chemical oxygen demand (COD) that requires extensive treatment. Anaerobic digestion (AD) has been used for initial treatment of HTC-PW, but the AD effluent is still high in COD and particles. Here, we show that microbial electrochemical technologies (MET) can be applied for COD removal from AD effluent of HTC-PW. Bioelectrochemical systems (BES) treating different shares of AD effluent from HTC-PW exhibited similar trends for current production. Thereby, maximum current densities of 0.24 mA cm−2 and COD removal of 65.4 ± 4.4% were reached (n = 3). Microbial community analysis showed that the genus Geobacter dominated anode biofilm and liquid phase of all reactors indicating its central role for COD oxidation and current generation.

Oxygen-reducing bidirectional microbial electrodes designed in real domestic wastewater

Microbial electrodes were designed in domestic wastewaters to catalyse the oxidation of organic matter (anode) and the reduction of oxygen (cathode) alternately. The successive aeration phases (cathode) enhanced the anodic efficiency, resulting in current densities of up to 6.4 Am^-2 without the addition of any substrate. Using nitrogen during the anodic phases affected the microbial populations and the electrodes showed a lower ability to subsequently turn to O₂ reduction than the microbial anodes formed in open-to-air conditions did. No strong difference was observed between internal and external biofilm, both of which showed a very large variety of taxa in terms of abundance as well as variance. They comprised a mix of aerobic and anaerobic species, many of which have already been identified separately in bioelectrochemical systems. Such a large diversity, which had not been observed in aerobic bidirectional bioelectrodes so far, can explain the efficiency and robustness observed here.

Extracellular polymeric substances trigger an increase in redox mediators for enhanced sludge methanogenesis

Artificial redox mediators can be employed to improve the electron transfer efficiency during sludge methanogenesis, whereas these artificial redox mediators have possible deficiencies, such as high cost and non-biodegradability. For large-scale commercial applications, more cost-effective and environmentally friendly alternatives should be developed. Herein, the potential of extracellular polymeric substances (EPS) as natural redox mediators to improve methanogenesis was investigated. Compared to the control test without EPS addition, the methane (CH₄) production yield was increased by 83.5 ± 2.4% with an EPS dosage of 0.50 g/L and the lag phase duration was shortened by 45.6 ± 7.0%, along with the enhanced sludge dewaterability. Spectroelectrochemical measurements implied that EPS addition notably changed the intensities of different redox-active groups, which decreased the charge transfer resistance and enhanced the extracellular electron transfer efficiency. These redox-active groups were mainly from the solubilization and hydrolysis of sludge protein due to increased protease activities, thereby leading to a higher acetate concentration during the acidification step. Further investigation showed that EPS addition also improved the activities of both acetotrophic and hydrogenotrophic methanogens, as indicated by a higher abundance of alpha subunit of methyl coenzyme M reductase (mcrA) genes, enhancing CH₄ production. This work provides an innovative strategy for improving sludge anaerobic digestion with efficient additives.

Microfluidic Microbial Bioelectrochemical Systems: An Integrated Investigation Platform for a More Fundamental Understanding of Electroactive Bacterial Biofilms

It is the ambition of many researchers to finally be able to close in on the fundamental, coupled phenomena that occur during the formation and expression of electrocatalytic activity in electroactive biofilms. It is because of this desire to understand that bioelectrochemical systems (BESs) have been miniaturized into microBES by taking advantage of the worldwide development of microfluidics. Microfluidics tools applied to bioelectrochemistry permit even more fundamental studies of interactions and coupled phenomena occurring at the microscale, thanks, in particular, to the concomitant combination of electroanalysis, spectroscopic analytical techniques and real-time microscopy that is now possible. The analytical microsystem is therefore much better suited to the monitoring, not only of electroactive biofilm formation but also of the expression and disentangling of extracellular electron transfer (EET) catalytic mechanisms. This article reviews the details of the configurations of microfluidic BESs designed for selected objectives and their microfabrication techniques. Because the aim is to manipulate microvolumes and due to the high modularity of the experimental systems, the interfacial conditions between electrodes and electrolytes are perfectly controlled in terms of physicochemistry (pH, nutrients, chemical effectors, etc.) and hydrodynamics (shear, material transport, etc.). Most of the theoretical advances have been obtained thanks to work carried out using models of electroactive bacteria monocultures, mainly to simplify biological investigation systems. However, a huge virgin field of investigation still remains to be explored by taking advantage of the capacities of microfluidic BESs regarding the complexity and interactions of mixed electroactive biofilms.

Ammonia oxidation and denitrification in a bio-anode single-chambered microbial electrolysis cell

In this study, anodic ammonia oxidation and denitrification were performed in single-chamber bioelectrochemical systems at a wide range of anodic potentials (-400 to +400 mV) versus Ag/AgCl. The low coulombic efficiencies (~30.84%) in reactors were mainly due to electrons being transferred to atmospheric oxygen through the electrode and reversal of the electrode. The removal efficiencies of acetate, ammonia, and total nitrogen were 100%, 100%, and 40.44% at +200 mV and 100%, 100%, and 50.24% at -200 mV, respectively. The nitrogen-removal mechanisms were nitrogen respiration/nitrate reduction at +200 mV and denitrification at -200 mV, and ammonia oxidation occurred by coupling with sulfate-reducing at -300 and -400 mV. Thauera, Comamonas, Alicycliphilus, Nitrosomonas, Desulforhabdus, Dethiosulfatibacter, and Desulfomicrobium were the dominant genera at the anode which participated in the nitrification/denitrification or sulfate-reducing processes. In summary, ammonia oxidation and denitrification could be coupled with carbon-removal or sulfur-reduction using a bio-anode with a suitable anodic potential.

Dual detection of biochemical oxygen demand and nitrate in water based on bidirectional Shewanella loihica electron transfer

This study for the first time proposed a method for simultaneously measuring BOD and nitrate in water using electrochemically active bacteria. Firstly, the bidirectional extracellular electron transfer (EET) capability of a model electricigen Shewanella loihica PV-4 was revealed. Then, based on the respective outward and inward EET, S. loihica PV-4 was utilized to detection BOD and nitrate. The results demonstrated a positive correlation between the outward EET and BOD (from 0 mg/L to 435 mg/L) while a negative correlation between the inward EET and nitrate (from 0 mg/L to 7 mg/L); both the relationships were well fitted by the combination of traditional linear model and Michaelis-Menten model (R²>0.96). Finally, a dual detection method for BOD and nitrate measurements was established based on the ano-cathodophilic capability of S. loihica PV-4 biofilm, and exhibited the characteristics of high accuracy (>80%) and fast analysis (<1h), suggesting a promising prospect in water monitoring.

Electrodes bioaugmentation promotes the removal of antibiotics from concentrated sludge in microbial electrolysis cells

Microbial electrolysis cells (MECs) had a potential to improve antibiotics removal from wastewater. However, research on antibiotics removal from concentrated sludge using MECs is still very limited. In this study, antibiotics removal and microbial responses in MECs treating concentrated sludge under different applied voltages (0.3 V-1.5 V) were investigated. Results showed that antibiotics removal efficiencies at 0.6 V and 1.0 V were 16.7%-26.6% higher than other applied voltages. The applied voltages had no obvious effects on the viability, activity and composition of microorganisms in the suspended sludge even up to 1.5 V. Bioelectrodes exhibited higher bioelectrocatalytic activity and denser microbial aggregation at 0.6 V and 1.0 V, under which higher antibiotics removal was also achieved. The enhanced removal of antibiotics at the optimal applied voltages was mainly contributed by the bioaugmentation of electrodes, but was irrelative with the electrochemical reaction and the microbial responses in suspended sludge.

Disparity of Cytochrome Utilization in Anodic and Cathodic Extracellular Electron Transfer Pathways of Geobacter sulfurreducens Biofilms

Extracellular electron transfer (EET) in microorganisms is prevalent in nature and has been utilized in functional bioelectrochemical systems. EET of Geobacter sulfurreducens has been extensively studied and has been revealed to be facilitated through c-type cytochromes, which mediate charge between the electrode and G. sulfurreducens in anodic mode. However, the EET pathway of cathodic conversion of fumarate to succinate is still under debate. Here, we apply a variety of analytical methods, including electrochemistry, UV-vis absorption and resonance Raman spectroscopy, quartz crystal microbalance with dissipation, and electron microscopy, to understand the involvement of cytochromes and other possible electron-mediating species in the switching between anodic and cathodic reaction modes. By switching the applied bias for a G. sulfurreducens biofilm coupled to investigating the quantity and function of cytochromes, as well as the emergence of Fe-containing particles on the cell membrane, we provide evidence of a diminished role of cytochromes in cathodic EET. This work sheds light on the mechanisms of G. sulfurreducens biofilm growth and suggests the possible existence of a nonheme, iron-involving EET process in cathodic mode.

Anode potentials regulate Geobacter biofilms: New insights from the composition and spatial structure of extracellular polymeric substances

The extracellular electron transfer (EET) efficiency in bioelectrochemical systems has been proven to be dependent on anode potentials. To explore the underlying mechanism, previous studies have mainly focused on EET conduit and bacterial biomass but rarely concerned with the role of extracellular polymeric substances (EPS) surrounding electroactive cells. In this study, the response of Geobacter biofilms to anode potentials was investigated with a special emphasis on the mechanistic role of EPS. The electrochemical activities and cell viabilities of Geobacter soli biofilms were simultaneously attenuated at 0.4 and 0.6 V compared to -0.2 and 0 V. It was found that the biofilms (especially the biofilm region closer to electrode surface) grown at -0.2 and 0 V produced relatively more extracellular redox-active proteins and less extracellular polysaccharides, which conferred higher electron accepting/donating capacities to EPS and consequently facilitated EET. Meanwhile, electrically nonconductive extracellular polysaccharide-dominated interior layers were formed in the biofilms grown at 0.4 and 0.6 V, which limited direct EET but might serve as physical barriers for protecting cells in these biofilms from the increasing stress by poised electrodes. These results demonstrated that the production of EPS under different anode potentials might be finely regulated by cells to keep balance between EET efficiency and cell-protection. This study provides a new insight to investigate the Geobacter biofilms coping with various environments, and is useful for optimizing electrochemical activity of anode biofilms.

Extracellular electron transfer modes and rate-limiting steps in denitrifying biocathodes

Denitrifying bioelectrochemical system provided an alternative technology for nitrogen removal, even power recovery from wastewater, and its nitrogen removal performance and intermediate accumulation were affected by the extracellular electron transfer modes and rate-limiting steps in denitrifying biocathodes. In the current study, the extracellular electron transfer modes and rate-limiting steps for nitrate reduction and nitrite reduction of denitrifying biocathode were investigated through cyclic voltammetry. When the cathode potential swept from 0.003 to - 0.897 V (vs. Ag/AgCl), denitrifiers were indispensable for electrochemical denitrification. Three peak potentials were found in the cyclic voltammogram of denitrifying biocathode, where E₁ (- 0.471 to - 0.465 V) and E₂ (- 0.412 to - 0.428 V) represented respectively nitrate reduction and nitrite oxidation while E₃ (- 0.822 to - 0.826 V) represented nitrite reduction. Nitrate reduction involved the direct electron transfer mode while nitrite reduction involved the mediated electron transfer mode. Intracellular catalytic reaction was the rate-limiting step for nitrate reduction, independent on the electrochemical activity of denitrifying biocathode and the nitrate supply. The nitrate supply posed an effect on the rate-limiting step for nitrite reduction. The mediator transfer was the rate-limiting step for nitrite reduction in the absence of nitrate. But both mediator transfer and intracellular catalytic reaction became the rate-limiting steps for nitrite reduction in the presence of sufficient nitrate.

Extraction and characterization of stratified extracellular polymeric substances in Geobacter biofilms

Extracellular polymeric substances (EPS) play crucial roles in promoting biofilm formation and contribute to electrochemical activities of biofilms in bioelectrochemical systems (BES). In this study, three stratified EPS fractions were extracted from Geobacter biofilms using EDTA-, ultrasound- and heating-based protocols and characterized with chemical, spectral and electrochemical analyses. Results suggested that, for Geobacter biofilms, ultrasound-based extraction protocol was more effective in EPS yield (62.1-66.5 mg C/g dry cell) than EDTA method, and had less cell lysis than heating method. The extraction methods greatly affected the proteins composition in the extracted EPS, indicated by the varied ratios of tryptophan/tyrosine protein-like substances. Electrochemical measurements demonstrated a good correlation between protein concentration and extracellular electron transfer function for both tightly-bound EPS and total EPS. This is the first study to extract and characterize stratified EPS fractions from Geobacter biofilms, and helpful for better understanding the function of EPS in BESs predominated by Geobacter.

Novel Gas Diffusion Cloth Bioanodes for High-Performance Methane-Powered Microbial Fuel Cells

Microbial fuel cells (MFCs) are a promising technology that converts chemical energy into electricity. However, up to now only few MFCs have been powered by gas fuels, such as methane, and their limited performance is still challenged by the low solubility and bioavailability of gases. Here, we developed a gas diffusion cloth (GDC) anode to significantly enhance the performance of methane-powered MFCs. The GDC anode was constructed by simply coating waterproof GORE-TEX cloth with conductive carbon cloth in one step. After biofilm enrichment, the GDC anodes obtained a methane-dependent current up to 1130.2 mA m^-2, which was 165.2 times higher than conventional carbon cloth (CC) anodes. Moreover, MFCs equipped with GDC anodes generated a maximum power density of 419.5 mW m^-2. Illumina high-throughput sequencing revealed that the GDC anode biofilm was dominated mainly by Geobacter, in contrast with the most abundant Methanobacterium in planktonic cells. It is hypothesized that Methanobacterium reversed the methanogenesis process by transferring electrons to the anodes, and Geobacter generated electricity via the intermediates (e.g., acetate) of anaerobic methane oxidation. Overall, this work provides an effective route in preparing facile and cost-effective anodes for high-performance methane MFCs.

Bidirectional extracellular electron transfers of electrode-biofilm: Mechanism and application

The extracellular electron transfer (EET) between microorganisms and electrodes forms the basis for microbial electrochemical technology (MET), which recently have advanced as a flexible platform for applications in energy and environmental science. This review, for the first time, focuses on the electrode-biofilm capable of bidirectional EET, where the electrochemically active bacteria (EAB) can conduct both the outward EET (from EAB to electrodes) and the inward EET (from electrodes to EAB). Only few microorganisms are tested in pure culture with the capability of bidirectional EET, however, the mixed culture based bidirectional EET offers great prospects for biocathode enrichment, pollutant complete mineralization, biotemplated material development, pH stabilization, and bioelectronic device design. Future efforts are necessary to identify more EAB capable of the bidirectional EET, to balance the current density, to evaluate the effectiveness of polarity reversal for biocathode enrichment, and to boost the future research endeavors of such a novel function.

Graphite-assisted electro-fermentation methanogenesis: Spectroelectrochemical and microbial community analyses of cathode biofilms

The stimulatory effect of conductive particles on anaerobic digestion has been demonstrated in recent years. However, it is yet to be determined whether and how conductive particles affect methanogenesis via electro-fermentation (electro-fermentation methanogenesis). In this study, it was demonstrated, for the first time, that conductive graphite boosted the methane production yield by 54.3% and increased the maximum methane production rate by 72.2% during electro-fermentation methanogenesis. Graphite significantly affected the composition of cathode biofilms, with more live and large aggregates being observed. Spectroelectrochemical analyses further showed that the kinds and intensities of biocatalytic active sites and redox groups on the cathode biofilms increased during graphite-assisted electro-fermentation methanogenesis. Particularly, c-type cytochromes, humic acid-like substances, and humic substances improved the long-range electron transport to methanogens such as Methanobacterium and Methanosarcina. The results have implications for the improvement of electro-fermentation process and the use of conductive materials for biofuel recovery.

Bioelectricity generation using microalgal biomass as electron donor in a bio-anode microbial fuel cell

In this study, microalgal biomass waste (Chlorella regularis) was treated while simultaneously producing bioelectricity in a microbial fuel cell (MFC). Algal biomass was the sole electron donor and was enriched with easily biodegradable proteins (46%) and carbohydrates (22%). The generated power density was 0.86 W/m² and the columbic efficiency reached ∼61.5%.The power generation could be further increased to 1.07 W/m² by using a biomass waste concentration enhancement strategy with maximum chemical oxygen demand (COD) removal of ∼65.2%. Via direct comparison, the power generation and COD removal capability of the algal-fed MFC was close to that of the commercial acetate-fed MFC. The algae-fed MFC presented superior electrochemical characteristics that were attributed to the complicated composition of the biomass anolyte. It possessed a multiple anode respiring bacterial group and diverse microbial community. Hence, this study provides a new strategy for the utilization of microalgal biomass as a bioresource.

Response of enhanced sludge methanogenesis by red mud to temperature: Spectroscopic and electrochemical elucidation of endogenous redox mediators

Adding conductive materials can promote methanogenesis via facilitating electron exchange between syntrophic bacteria and methanogenic archaea. However, little is known about how temperature would interact with such an addition and thus affect the compositions and characteristics of endogenous redox mediators (ERMs). In particular, it is of strong interest to understand how the temperature variation would affect the improvement on methanogenesis induced by ERMs with conductive materials. Herein, we have investigated the response of sludge methanogenesis to temperature variation (from 15 to 35 °C) and spectroscopically detected the ERMs induced by conductive red mud. It was demonstrated that the increasing temperature enhanced the stimulating effect of conductive red mud on methane accumulation, and the methane production potential showed a linear relationship with redox parameters such as areal capacitance (C_a), free charges (R₂) and electron exchange capacity (EEC). 2DCOS spectra further indicated that ν_(C-O) and δ_(O-H) in humic acids, β-turn type III amide I ν_s(C=O) in Cytochrome c, and δ_(C-H) in amines and lipids became the main redox groups in ERMs at 35 °C with the addition of red mud. The model revealed that the contribution of ERMs to the CO₂ reduction to CH₄ increased from 35.2 ± 1.4% to 58.6 ± 1.5% when the temperature increased from 15 to 35 °C. Our finding that conductive materials stimulated the formation and electroactivity of ERMs with the increasing temperature during anaerobic digestion can have important implications for the improvement of engineered methanogenic processes.

Accelerating the start-up of the cathodic biofilm by adding acyl-homoserine lactone signaling molecules

Electroactive biofilms (EABs) are essential for bioelectrochemical systems, however, the formation of cathodic EABs is more time-consuming than anodic EABs. This study aims to evaluate whether acyl-homoserine lactones (AHLs) could facilitate the start-up of cathodic Geobacter soli EABs. With AHL addition, the biomass, cell viability, and extracellular polymeric substance (EPS) abundance of cathode-associated G. soli EABs were increased. Likewise, redox activities of EPS and outermost proteins in the cathodic EABs were enhanced in the presence of AHLs, which consequently led to better start-up performance of biofilms. Compared to the control without AHLs, start-up lag periods were reduced by approximately 50%, electron uptakes were enhanced by 1.3-2.0 times, and denitrification rates were more than doubled with AHL addition in the start-up cycle, which were comparable to those of mature G. soli cathodic EABs. These findings open up an opportunity for accelerating the start-up of cathodic biofilms via AHLs.

Electron carriers increase electricity production in methane microbial fuel cells that reverse methanogenesis

BACKGROUND

We previously reversed methanogenesis in microbial fuel cells (MFCs) to produce electricity for the first time from methane by combining an engineered archaeal strain that produces methyl-coenzyme M reductase from unculturable anaerobic methanotrophs (to capture methane and secrete acetate) with Geobacter sulfurreducens (to produce electrons from the generated acetate) and methane-acclimated sludge (to provide electron shuttles).

RESULTS

Here, the power density in MFCs was increased 77-fold to 5216 mW/m² and the current density in MFCs was increased 73-fold to 7.3 A/m² by reducing the surface area of the cathode (to make reasonable comparisons to other MFCs), by changing the order the strains of the consortium were added to the anode compartment, and by adding additional electron carriers (e.g., humic acids and cytochrome C).

CONCLUSIONS

This power density and current density are comparable to the best for any MFC, including those with Shewanella and Geobacter spp. that utilize non-gaseous substrates. In addition, we demonstrate the methane MFC may be used to power a fan by storing the energy in a capacitor. Hence, MFCs that convert methane to electricity are limited by electron carriers.

Electro-Microbiology as a Promising Approach Towards Renewable Energy and Environmental Sustainability

Microbial electrochemical technologies provide sustainable wastewater treatment and energy production. Despite significant improvements in the power output of microbial fuel cells (MFCs), this technology is still far from practical applications. Extracting electrical energy and harvesting valuable products by electroactive bacteria (EAB) in bioelectrochemical systems (BESs) has emerged as an innovative approach to address energy and environmental challenges. Thus, maximizing power output and resource recovery is highly desirable for sustainable systems. Insights into the electrode-microbe interactions may help to optimize the performance of BESs for envisioned applications, and further validation by bioelectrochemical techniques is a prerequisite to completely understand the electro-microbiology. This review summarizes various extracellular electron transfer mechanisms involved in BESs. The significant role of characterization techniques in the advancement of the electro-microbiology field is discussed. Finally, diverse applications of BESs, such as resource recovery, and contributions to the pursuit of a more sustainable society are also highlighted.

Transcriptomic, Proteomic, and Bioelectrochemical Characterization of an Exoelectrogen Geobacter soli Grown With Different Electron Acceptors

The ability of Geobacter species to transfer electrons outside cells enables them to play an important role in biogeochemical and bioenergy processes. Our knowledge of the extracellular electron transfer (EET) process in the genus Geobacter is mainly from the study of G. sulfurreducens, and in order to fully investigate the EET mechanisms in the genus Geobacter, other Geobacter species should also be considered. This study focused on the EET of Geobacter soli GSS01, which exhibited a capability of reducing insoluble Fe(III) oxides and generating electrical current comparable with G. sulfurreducens PCA. Electrochemical characterization, including cyclic voltammetry, differential pulse voltammetry, and electrochemical in situ FTIR spectra, revealed that different redox proteins contributed to the electrochemical behaviors of G. soli and G. sulfurreducens. Based on comparative transcriptomic and proteomic analyses, OmcS was the most upregulated protein in both G. soli and G. sulfurreducens cells grown with insoluble Fe(III) oxides vs. soluble electron acceptor. However, the proteins including OmcE and PilA that were previously reported as being important for EET in G. sulfurreducens were downregulated or unchanged in G. soli cells grown with insoluble electron acceptors vs. soluble electron acceptor, and many proteins that were upregulated in G. soli cells grown with insoluble electron acceptors vs. soluble electron acceptor, such as OmcN, are not important for EET in G. sulfurreducens. We also identified 30 differentially expressed small RNAs (sRNAs) in G. soli cells grown with different acceptors. Taken together, these findings help to understand the versatile EET mechanisms that exist in the genus Geobacter and point to the possibility of sRNA in modulating EET gene expression.

Enhancing sludge methanogenesis with improved redox activity of extracellular polymeric substances by hematite in red mud

Different conductive materials have been employed to stimulate direct interspecies electron transfer (DIET) during methanogenesis, but few studies have been concerned with the interaction between conductive materials and extracellular polymeric substances (EPS) such as the effect on sludge aggregation and redox activity of EPS. This study aims to systematically investigate the role of red mud with 45.46 wt% hematite on methanogenesis during the anaerobic digestion of waste activated sludge. The results showed that the multivalent cations from hematite effectively promoted the formation of large and compact aggregates, which might contribute to the rapid direct electron exchange during the DIET process. Meanwhile, more redox-active mediators including c-type cytochromes (c-Cyts) and humic substances, particularly in tight-bound EPS (TB-EPS), and more redox-active metals such as Fe introduced by red mud could take part in the interspecies electron transfer process between syntrophic bacteria and methanogenic archaea, which also promoted methane production (35.52 ± 2.64% increase compared with the control). This study provided initial scientific evidence to comprehensively assess the role of conductive materials during methanogenesis, with important implications for the biogeochemical redox processes of conductive minerals in natural and engineered environments.