Detoxification of ionic liquids using glutathione, cysteine, and NADH: Toxicity evaluation by Tetrahymena pyriformis

Sirt5-mediated lysine desuccinylation regulates oxidative stress adaptation in Magnaporthe oryzae during host intracellular infection

Plant pathogenic fungi elaborate numerous detoxification strategies to suppress host reactive oxygen species (ROS), but their coordination is not well-understood. Here, we show that Sirt5-mediated protein desuccinylation in Magnaporthe oryzae is central to host ROS detoxification. SIRT5 encodes a desuccinylase important for virulence via adaptation to host oxidative stress. Quantitative proteomics analysis identified a large number of succinylated proteins targeted by Sirt5, most of which were mitochondrial proteins involved in oxidative phosphorylation, TCA cycle, and fatty acid oxidation. Deletion of SIRT5 resulted in hypersuccinylation of detoxification-related enzymes, and significant reduction in NADPH : NADP+ and GSH : GSSG ratios, disrupting redox balance and impeding invasive growth. Sirt5 desuccinylated thioredoxin Trx2 and glutathione peroxidase Hyr1 to activate their enzyme activity, likely by affecting proper folding. Altogether, this work demonstrates the importance of Sirt5-mediated desuccinylation in controlling fungal process required for detoxifying host ROS during M. oryzae infection.

Mechanisms of the novel pesticide sodium dodecyl benzene sulfonate in the mitigation of protozoan ciliated pathogens during microalgal cultivation

Protozoan ciliates represent a common biological contaminant during microalgae cultivation, which will lead to a decline in microalgae productivity. This study investigated the effectiveness of sodium dodecyl benzene sulfonate (SDBS) in controlling ciliate populations within microalgae cultures. SDBS concentrations of 160 mg/L and 100 mg/L were found to effectively manage the representative species of ciliates contamination by Euplotes vannus and Uronema marinum during the cultivation of Synechococcus and Chlorella, and the growth vitality of microalgae has been restored. Additionally, SDBS at these concentrations reduced oxidative stress resistance and induced membrane damage to remove biological pollutants by modulating enzyme activity, affecting lipid, energy, amino acid metabolism pathways, and processes such as translation and protein folding. This research provides insights into the mechanisms through which SDBS effectively combats protozoan ciliates during the microalgal cultivation. This contributes to reduce biological pollution, ensure the overall productivity and healthy and sustainable management of microalgae ecosystems.

A gold-silver bimetallic nanocluster-based fluorescent probe for cysteine detection in milk and apple

Noble metal nanoclusters have attracted much attention due to their excellent optical properties. In the present work, a silver-doped gold-based bimetallic nanoclusters (Au/Ag NCs) were reasonably designed and prepared through a one-pot method by using 5-mercapto-1-tetrazolea-acetic acid sodium salt (MTAS) as a protector and capping agent. In comparison with the monometallic nanoclusters, Ag-doped metallic nanoclusters show better performance. The particle size of the MTAS-Au/Ag NCs is slightly larger than that of the undoped Au NCs by about 1.86 ± 0.5 nm, and the MTAS-Au/Ag NCs exhibit an emission peak at 635 nm with a quantum yield (QY) of 3.05%. The presence of cysteine (Cys) induces efficient quenching of the photoluminescence of the obtained Au/Ag NCs, achieving the sensitive detection of Cys with a detection limit of 16 nM. The fluorescence quenching rate of the nano fluorescent probe has a linear relationship with the cysteine concentration. Under the best detection conditions, the linear range for Cys detection with MTAS-Au/Ag NCs as a probe is 0.05-25.0 μM. Moreover, this probe has been successfully applied to the analysis of Cys in milk and apples, and a satisfactory recovery rate has been obtained, indicating the effectiveness and reliability of the sensor system for the detection of actual samples.

A Dual-Mode NADH Biosensor Based on Gold Nanostars Decorated CoFe2 Metal-Organic Frameworks to Reveal Dynamics of Cell Metabolism

Nicotinamide adenine dinucleotide (NADH) is central to metabolism and implicated in various diseases. Herein, nanohybrids of gold nanostars and metal-organic frameworks are devised and demonstrated as a dual-mode NADH sensor, for which colorimetric detection is enabled by its peroxidase-like nanozyme property and Raman detection is realized by its surface-enhanced Raman scattering property with the detection limit as low as 28 pM. More importantly, this probe enables real-time SERS monitoring in living cells, providing a unique tool to investigate dynamic cellular processes involving NADH. Our experiments reveal that metabolism dynamics is accelerated by glucose and is much higher in cancerous cells. The SERS results can also be verified by the colorimetric detection. This sensor provides a new potential to detect biomarkers and their dynamics in situ.

Responses of soil fertility and microbiomes of atrazine contaminated soil to remediation by hydrochar and persulfate

Peroxydisulfate (PDS) is widely used in field-scale remediation of organically polluted soil, yet PDS is detrimental to the soil microbiome. In this work, sludge-derived hydrochar was used to alleviate the oxidative damage of PDS to the soil ecosystem and simultaneously improve atrazine (ATZ) degradation. Response surfaces showed that ATZ degradation was enhanced with an increased dosage of PDS (regression slope of 24.09) and hydrochar (regression slope of 4.19). In contrast, bacterial abundance was negatively related to PDS dosage but positively to hydrochar dosage. At the optimum dosage of PDS (2.21% dry weight of soil) and hydrochar (5% dry weight of soil), ATZ degradation reached 95.31%, and bacterial abundance recovered to 7.72 log gene copy number g^-1 soil (versus 8.44 in raw soil). Hydrochar alleviated the negative impacts of PDS on soil fertility such as urease activity. High PDS dosages (3% dry weight of soil) facilitated the proliferation of Halomonas, while moderate dosages (1.5% dry weight of soil) stimulated Alicyclobacillus. Hydrochar facilitated the growth of functional genera like Comamonas, Cloacibacterium, and Terrabacter. ATZ degradation pathway was positively correlated with Bacillus and nitrogen metabolism pathway. Hydrochar mediated intracellular reactive oxidative species scavenger reactions in catalase activity, allowing microbial survival under harsh oxidative conditions due to PDS addition.

Light-absorption and fluorescence fingerprinting characteristics of water and methanol soluble organic compounds in PM2.5 in cold regions of Northeast China

High-performance liquid chromatography-size exclusion chromatography and excitation-emission matrix (EEM) fluorescence spectroscopy were used to analyze the seasonal variations and potential sources of molecular weight (MW) separated light-absorbing chromophores and fluorophores of water-soluble organic compounds (WSOC) and methanol-soluble organic compounds (MSOC) in PM_2.5 in cold areas of northern China. The results showed that the light-absorbing organics in MSOC had larger weight-average MW (M_w) (3.19 kDa) and number-average MW (M_n) (1.13 kDa) compared with WSOC (M_w: 1.41 kDa, M_n: 0.692 kDa). The light-absorption of organics showed a trend of winter>spring>autumn>summer and increased on air pollution days. Three fluorescent components including humic-like, protein-like, and terrestrial humic-like components in WSOC were extracted by parallel factor analysis (PARAFAC). Fluorophores in WSOC were dominated by humic-like and terrestrial humic-like components (67.7%). Three fluorescent components extracted from MSOC were low oxidation humic-like, polycyclic aromatic hydrocarbon (PAH)-like, and protein-like components respectively. It is worth noting that compared with WSOC, MSOC may have a higher human health risk due to the presence of PAH-like components. The combination of PARAFAC and self-organizing map had the potential to identify potential sources of fluorophores. It provided a new perspective for comprehensively exploring the characteristics of fluorophores in aerosols. This study provided a reference for further understanding the chemical composition and optical properties of organic aerosols in the cold regions of northern China.