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Branska B, Koppova K, Husakova M, Patakova P. Application of fed-batch strategy to fully eliminate the negative effect of lignocellulose-derived inhibitors in ABE fermentation. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2024; 17:87. [PMID: 38915101 PMCID: PMC11197323 DOI: 10.1186/s13068-024-02520-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Accepted: 05/16/2024] [Indexed: 06/26/2024]
Abstract
BACKGROUND Inhibitors that are released from lignocellulose biomass during its treatment represent one of the major bottlenecks hindering its massive utilization in the biotechnological production of chemicals. This study demonstrates that negative effect of inhibitors can be mitigated by proper feeding strategy. Both, crude undetoxified lignocellulose hydrolysate and complex medium supplemented with corresponding inhibitors were tested in acetone-butanol-ethanol (ABE) fermentation using Clostridium beijerinckii NRRL B-598 as the producer strain. RESULTS First, it was found that the sensitivity of C. beijerinckii to inhibitors varied with different growth stages, being the most significant during the early acidogenic phase and less pronounced during late acidogenesis and early solventogenesis. Thus, a fed-batch regime with three feeding schemes was tested for toxic hydrolysate (no growth in batch mode was observed). The best results were obtained when the feeding of an otherwise toxic hydrolysate was initiated close to the metabolic switch, resulting in stable and high ABE production. Complete utilization of glucose, and up to 88% of xylose, were obtained. The most abundant inhibitors present in the alkaline wheat straw hydrolysate were ferulic and coumaric acids; both phenolic acids were efficiently detoxified by the intrinsic metabolic activity of clostridia during the early stages of cultivation as well as during the feeding period, thus preventing their accumulation. Finally, the best feeding strategy was verified using a TYA culture medium supplemented with both inhibitors, resulting in 500% increase in butanol titer over control batch cultivation in which inhibitors were added prior to inoculation. CONCLUSION Properly timed sequential feeding effectively prevented acid-crash and enabled utilization of otherwise toxic substrate. This study unequivocally demonstrates that an appropriate biotechnological process control strategy can fully eliminate the negative effects of lignocellulose-derived inhibitors.
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Affiliation(s)
- Barbora Branska
- Department of Biotechnology, University of Chemistry and Technology Prague, Technická 5, 16628, Prague, Czech Republic.
| | - Kamila Koppova
- Department of Biotechnology, University of Chemistry and Technology Prague, Technická 5, 16628, Prague, Czech Republic
| | - Marketa Husakova
- Department of Biotechnology, University of Chemistry and Technology Prague, Technická 5, 16628, Prague, Czech Republic
| | - Petra Patakova
- Department of Biotechnology, University of Chemistry and Technology Prague, Technická 5, 16628, Prague, Czech Republic
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Wang B, Zhou X, Liu W, Liu MH, Mo D, Wu QF, Wang YJ, Zhang MM, Chen L, Yuan S, Zhou B, Li X, Lu D. Construction of Clostridium tyrobutyricum strain and ionic membrane technology combination pattern for refinery final molasses recovery and butyric acid production. Front Microbiol 2023; 14:1065953. [PMID: 36825085 PMCID: PMC9941566 DOI: 10.3389/fmicb.2023.1065953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 01/20/2023] [Indexed: 02/10/2023] Open
Abstract
Introduction Clostridium tyrobutyricum has considerable prospect in the production of organic acids. Globally, refinery final molasses is rich in sugar and reported to have high levels of accumulation and high emission costs, recognized as an excellent substrate for C. tyrobutyricum fermentation, but there is no suitable method available at present. Methods In this study, an acid-base treatment combined with a new green membrane treatment technology - a dynamic ion-exchange membrane -was used to pretreat refinery final molasses, so that it could be used for C. tyrobutyricum to produce butyric acid. A high-performance liquid chromatography method was established to determine the conversion of a large amount of sucrose into fermentable sugars (71.88 g/L glucose and 38.06 g/L fructose) in the treated refinery final molasses. The process of sequential filtration with 3, 1, and 0.45 μm-pore diameter dynamic ion-exchange membranes could remove impurities, pigments, and harmful substances from the refinery final molasses, and retain the fermentable sugar. Results and discussion This means that refinery final molasses from the sugar industry could be utilized as a high-value by-product and used for the growth of C. tyrobutyricum, with industrial feasibility and economic competitiveness. Using the treated refinery final molasses as a carbon source, C. tyrobutyricum was screened by the method of adaptive evolution. The strain with butyric acid yielded 52.54 g/L, and the yield of the six carbon sugar was increased from 0.240 to 0.478 g/g. The results showed that combination of C. tyrobutyricum and ionic membrane technology broke through the bottleneck of its utilization of refinery final molasses. This study provided an innovative idea for the C. tyrobutyricum fermentation to produce butyric acid.
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Affiliation(s)
- Bing Wang
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China,College of Food and Bioengineering, Henan University of Science and Technology, Luoyang, Henan, China
| | - Xiang Zhou
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China,University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China,*Correspondence: Xiang Zhou, ,
| | - Wei Liu
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong, China
| | - Mei-Han Liu
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China,College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Dan Mo
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China,University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China
| | - Qing-Feng Wu
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China
| | - Ya-Juan Wang
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China,University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China
| | - Miao-Miao Zhang
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China
| | - Lei Chen
- College of Food and Bioengineering, Henan University of Science and Technology, Luoyang, Henan, China
| | - Shan Yuan
- CAS Key Laboratory of Bio-Based Materials, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, Shandong, China
| | - Bo Zhou
- College of Food Science and Engineering, Central South University of Forestry and Technology, Changsha, China
| | - Xin Li
- College of Food and Bioengineering, Henan University of Science and Technology, Luoyang, Henan, China,Xin Li,
| | - Dong Lu
- Institute of Modern Physics, Chinese Academy of Sciences, Lanzhou, China,University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China,Gansu Key Laboratory of Microbial Resources Exploitation and Application, Lanzhou, China,Dong Lu,
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Yang Z, Leero DD, Yin C, Yang L, Zhu L, Zhu Z, Jiang L. Clostridium as microbial cell factory to enable the sustainable utilization of three generations of feedstocks. BIORESOURCE TECHNOLOGY 2022; 361:127656. [PMID: 35872277 DOI: 10.1016/j.biortech.2022.127656] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/17/2022] [Revised: 07/15/2022] [Accepted: 07/16/2022] [Indexed: 06/15/2023]
Abstract
The sustainable production of chemicals and biofuels from non-fossil carbon sources is considered key to reducing greenhouse gas (GHG) emissions. Clostridium sp. can convert various substrates, including the 1st-generation (biomass crops), the 2nd-generation (lignocellulosic biomass), and the 3rd-generation (C1 gases) feedstocks, into high-value products, which makes Clostridia attractive for biorefinery applications. However, the complexity of lignocellulosic catabolism and C1 gas utilization make it difficult to construct efficient production routes. Accordingly, this review highlights the advances in the development of three generations of feedstocks with Clostridia as cell factories. At the same time, more attention was given to using agro-industrial wastes (lignocelluloses and C1 gases) as the feedstocks, for which metabolic and process engineering efforts were comprehensively analyzed. In addition, the challenges of using agro-industrial wastes are also discussed. Lastly, several new synthetic biology tools and regulatory strategies are emphasized as promising technologies to be developed to address the aforementioned challenges in Clostridia and realize the efficient utilization of agro-industrial wastes.
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Affiliation(s)
- Zhihan Yang
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, China
| | - Donald Delano Leero
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, China
| | - Chengtai Yin
- College of Overseas Education, Nanjing Tech University, Nanjing 211816, China
| | - Lei Yang
- College of Biotechnology and Pharmaceutical Engineering, Nanjing Tech University, Nanjing 211816, China
| | - Liying Zhu
- College of Chemical and Molecular Engineering, Nanjing Tech University, Nanjing 211816, China
| | - Zhengming Zhu
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, China
| | - Ling Jiang
- College of Food Science and Light Industry, Nanjing Tech University, Nanjing 211816, China; State Key Laboratory of Materials-Oriented Chemical Engineering, Nanjing Tech University, Nanjing 211816, China.
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Zhao T, Tashiro Y, Sonomoto K. Smart fermentation engineering for butanol production: designed biomass and consolidated bioprocessing systems. Appl Microbiol Biotechnol 2019; 103:9359-9371. [PMID: 31720773 DOI: 10.1007/s00253-019-10198-2] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2019] [Revised: 10/08/2019] [Accepted: 10/15/2019] [Indexed: 12/18/2022]
Abstract
There is a renewed interest in acetone-butanol-ethanol (ABE) fermentation from renewable substrates for the sustainable and environment-friendly production of biofuel and platform chemicals. However, the ABE fermentation is associated with several challenges due to the presence of heterogeneous components in the renewable substrates and the intrinsic characteristics of ABE fermentation process. Hence, there is a need to select optimal substrates and modify their characteristics suitable for the ABE fermentation process or microbial strain. This "designed biomass" can be used to establish the consolidated bioprocessing systems. As there are very few reports on designed biomass, the main objectives of this review are to summarize the main challenges associated with ABE fermentation from renewable substrates and to introduce feasible strategies for designing the substrates through pretreatment and hydrolysis technologies as well as through the establishment of consolidated bioprocessing systems. This review offers new insights on improving the efficiency of ABE fermentation from designed renewable substrates.
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Affiliation(s)
- Tao Zhao
- Laboratory of Microbial Technology, Division of Systems Bioengineering, Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka, 819-0395, Japan.,Energy-rich Compounds Production by Photosynthetic Carbon Fixation Research Center, College of Life Science, Qingdao Agricultural University, No. 700 Changcheng Road, Chengyang District, Qingdao, 266109, China
| | - Yukihiro Tashiro
- Laboratory of Soil and Environmental Microbiology, Division of Systems Bioengineering, Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka, 819-0395, Japan.,Laboratory of Microbial Environmental Protection, Tropical Microbiology Unit, Center for International Education and Research of Agriculture, Faculty of Agriculture, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka, 819-0395, Japan
| | - Kenji Sonomoto
- Laboratory of Microbial Technology, Division of Systems Bioengineering, Department of Bioscience and Biotechnology, Faculty of Agriculture, Graduate School, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka, 819-0395, Japan.
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Luo H, Zheng P, Xie F, Yang R, Liu L, Han S, Zhao Y, Bilal M. Co-production of solvents and organic acids in butanol fermentation by Clostridium acetobutylicum in the presence of lignin-derived phenolics. RSC Adv 2019; 9:6919-6927. [PMID: 35518483 PMCID: PMC9061099 DOI: 10.1039/c9ra00325h] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Accepted: 02/21/2019] [Indexed: 12/16/2022] Open
Abstract
Co-production of solvents (butanol, acetone, and ethanol) and organic acids (butyrate and acetate) by Clostridium acetobutylicum using lignocellulosic biomass as a substrate could further enlarge the application scope of butanol fermentation. This is mainly because solvents and organic acids could be used for production of fine chemicals such as butyl butyrate, butyl oleate, etc. However, many phenolic fermentation inhibitors are formed during the pretreatment process because of lignin degradation. The present study investigated the effects of five typical lignin-derived phenolics on the biosynthesis of solvents and organic acids in C. acetobutylicum ATCC 824. Results obtained in 100 mL anaerobic bottles indicated that butanol concentration was enhanced from 10.29 g L−1 to 11.36 g L−1 by the addition of 0.1 g L−1 vanillin. Subsequently, a pH-control strategy was proposed in a 5 L anaerobic fermenter to alleviate the “acid crash” phenomenon and improve butanol fermentation performance, simultaneously. Notably, organic acid concentration was enhanced from 6.38 g L−1 (control) to a high level of 9.21–12.57 g L−1 with vanillin or/and vanillic acid addition (0.2 g L−1) under the pH-control strategy. Furthermore, the butyrate/butanol ratio reached the highest level of 0.80 g g−1 with vanillin/vanillic acid co-addition, and solvent concentration reached 13.85 g L−1, a comparable level to the control (13.69 g L−1). The effectiveness and robustness of the strategy for solvent and organic acid co-production was also verified under five typical phenolic environments. In conclusion, these results suggest that the proposed process strategy would potentially promote butanol fermentative products from renewable biomass. Lignin-derived phenolics enhance solvent and organic acid biosynthesis in butanol fermentation by Clostridium acetobutylicum ATCC 824.![]()
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Affiliation(s)
- Hongzhen Luo
- School of Life Science and Food Engineering
- Huaiyin Institute of Technology
- Huaian 223003
- China
| | - Panli Zheng
- School of Life Science and Food Engineering
- Huaiyin Institute of Technology
- Huaian 223003
- China
| | - Fang Xie
- School of Life Science and Food Engineering
- Huaiyin Institute of Technology
- Huaian 223003
- China
| | - Rongling Yang
- School of Life Science and Food Engineering
- Huaiyin Institute of Technology
- Huaian 223003
- China
| | - Lina Liu
- School of Life Science and Food Engineering
- Huaiyin Institute of Technology
- Huaian 223003
- China
| | - Shuo Han
- Department of Chemistry
- Missouri University of Science and Technology
- Rolla
- USA
| | - Yuping Zhao
- School of Life Science and Food Engineering
- Huaiyin Institute of Technology
- Huaian 223003
- China
| | - Muhammad Bilal
- School of Life Science and Food Engineering
- Huaiyin Institute of Technology
- Huaian 223003
- China
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