1
|
Ghini V, Meoni G, Vignoli A, Di Cesare F, Tenori L, Turano P, Luchinat C. Fingerprinting and profiling in metabolomics of biosamples. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY 2023; 138-139:105-135. [PMID: 38065666 DOI: 10.1016/j.pnmrs.2023.10.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Revised: 10/13/2023] [Accepted: 10/15/2023] [Indexed: 12/18/2023]
Abstract
This review focuses on metabolomics from an NMR point of view. It attempts to cover the broad scope of metabolomics and describes the NMR experiments that are most suitable for each sample type. It is addressed not only to NMR specialists, but to all researchers who wish to approach metabolomics with a clear idea of what they wish to achieve but not necessarily with a deep knowledge of NMR. For this reason, some technical parts may seem a bit naïve to the experts. The review starts by describing standard metabolomics procedures, which imply the use of a dedicated 600 MHz instrument and of four properly standardized 1D experiments. Standardization is a must if one wants to directly compare NMR results obtained in different labs. A brief mention is also made of standardized pre-analytical procedures, which are even more essential. Attention is paid to the distinction between fingerprinting and profiling, and the advantages and disadvantages of fingerprinting are clarified. This aspect is often not fully appreciated. Then profiling, and the associated problems of signal assignment and quantitation, are discussed. We also describe less conventional approaches, such as the use of different magnetic fields, the use of signal enhancement techniques to increase sensitivity, and the potential of field-shuttling NMR. A few examples of biomedical applications are also given, again with the focus on NMR techniques that are most suitable to achieve each particular goal, including a description of the most common heteronuclear experiments. Finally, the growing applications of metabolomics to foodstuffs are described.
Collapse
Affiliation(s)
- Veronica Ghini
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Gaia Meoni
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Alessia Vignoli
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Francesca Di Cesare
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy
| | - Leonardo Tenori
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy; Consorzio Interuniversitario Risonanze Magnetiche Metallo Proteine (CIRMMP), Sesto Fiorentino, Italy
| | - Paola Turano
- Magnetic Resonance Center (CERM), University of Florence, Sesto Fiorentino, Italy; Department of Chemistry "Ugo Schiff", University of Florence, Sesto Fiorentino, Italy; Consorzio Interuniversitario Risonanze Magnetiche Metallo Proteine (CIRMMP), Sesto Fiorentino, Italy.
| | - Claudio Luchinat
- Consorzio Interuniversitario Risonanze Magnetiche Metallo Proteine (CIRMMP), Sesto Fiorentino, Italy; Giotto Biotech S.r.l., Sesto Fiorentino, Italy.
| |
Collapse
|
2
|
Zhang X, Zhao J, Wang C, Zhu L, Pan X, Liu Y, Li J, Guo X, Chen D. Measurement of sucrose in beverages using a blood glucose meter with cascade-catalysis enzyme particle. Food Chem 2023; 398:133951. [DOI: 10.1016/j.foodchem.2022.133951] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/07/2021] [Revised: 08/08/2022] [Accepted: 08/12/2022] [Indexed: 11/29/2022]
|
3
|
Lara-Cruz GA, Jaramillo-Botero A. Molecular Level Sucrose Quantification: A Critical Review. SENSORS (BASEL, SWITZERLAND) 2022; 22:9511. [PMID: 36502213 PMCID: PMC9740140 DOI: 10.3390/s22239511] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/01/2022] [Revised: 11/29/2022] [Accepted: 12/02/2022] [Indexed: 06/17/2023]
Abstract
Sucrose is a primary metabolite in plants, a source of energy, a source of carbon atoms for growth and development, and a regulator of biochemical processes. Most of the traditional analytical chemistry methods for sucrose quantification in plants require sample treatment (with consequent tissue destruction) and complex facilities, that do not allow real-time sucrose quantification at ultra-low concentrations (nM to pM range) under in vivo conditions, limiting our understanding of sucrose roles in plant physiology across different plant tissues and cellular compartments. Some of the above-mentioned problems may be circumvented with the use of bio-compatible ligands for molecular recognition of sucrose. Nevertheless, problems such as the signal-noise ratio, stability, and selectivity are some of the main challenges limiting the use of molecular recognition methods for the in vivo quantification of sucrose. In this review, we provide a critical analysis of the existing analytical chemistry tools, biosensors, and synthetic ligands, for sucrose quantification and discuss the most promising paths to improve upon its limits of detection. Our goal is to highlight the criteria design need for real-time, in vivo, highly sensitive and selective sucrose sensing capabilities to enable further our understanding of living organisms, the development of new plant breeding strategies for increased crop productivity and sustainability, and ultimately to contribute to the overarching need for food security.
Collapse
Affiliation(s)
| | - Andres Jaramillo-Botero
- Omicas Alliance, Pontificia Universidad Javeriana, Cali 760031, Colombia
- Chemistry and Chemical Engineering, California Institute of Technology, Pasadena, CA 91125, USA
| |
Collapse
|
4
|
Xie Q, Gong L, Huang F, Cao M, Liu Y, Yuan H, Li B, Jian Y, Peng C, Zhou S, Chu Y, Wang W. A Rapid and Accurate 1HNMR Method for the Identification and Quantification of Major Constituents in Qishen Yiqi Dripping Pills. J AOAC Int 2021; 104:506-514. [PMID: 33349848 DOI: 10.1093/jaoacint/qsaa130] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Revised: 08/03/2020] [Accepted: 09/10/2020] [Indexed: 12/30/2022]
Abstract
BACKGROUND Qishen Yiqi dripping pills (QSYQ), composed of four herbal medicines-Salvia miltiorrhiza, Astragalus membranaceus, Panax notoginseng, and Dalbergiaodorifera-are widely used to treat ischemic cerebrovascular and hemorrhagic cerebrovascular conditions. OBJECTIVE In this study, a rapid and accurate proton NMR (1HNMR) spectroscopy method was established to control the quality of QSYQ and ensure their clinical efficacy. METHOD Firstly, different types of metabolites were identified based on the proton signal peaks of chemical shifts, coupling constants, and related information provided through two-dimensional NMR spectroscopy. Secondly, a quantitative 1HNMR method was established for the simultaneous determination of major constituents in QSYQ samples. In addition, an HPLC method was performed to verify the results obtained by the quantitative proton NMR (qHNMR) method. RESULTS In the present study, 26 metabolites were identified in the 1HNMR spectra of QSYQ. In addition, a rapid and accruate qHNMR method was established for the simultaneous determination of protocatechualdehyde, rosmarinic acid, danshensu, calycosin-7-O-β-D-glucoside, and ononin in ten batches of QSYQ samples for the first time. Moreover, the proposed qHNMR method and HPLC method were compared using Bland-Altman and plots Passing-Bablok regression, indicating no significant differences and a strong correlation between the two analytical methods. CONCLUSIONS This method is an important tool for the identification and quantification of major constituents in QSYQ. HIGHLIGHTS Compared with traditional HPLC, the established qHNMR method has the advantages of simple sample preparation, short analysis time, and non-destructive analysis.
Collapse
Affiliation(s)
- Qingling Xie
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Limin Gong
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Feibing Huang
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Mengru Cao
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Yongbei Liu
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Hanwen Yuan
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Bin Li
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Yuqing Jian
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Caiyun Peng
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| | - Shuiping Zhou
- Tasly Holding Group Co., Ltd, Tasly Academy, Tianjin, P. R. China, 300410
| | - Yang Chu
- Tasly Holding Group Co., Ltd, Tasly Academy, Tianjin, P. R. China, 300410.,Tasly Pharmaceutical Group Co., Ltd, State Key Laboratory of Core Technology in Innovation Chinese Medicine, Tianjin, P. R. China, 300410
| | - Wei Wang
- Hunan University of Chinese Medicine, School of Pharmacy, Academician Atta-ur-Rahman Belt and Road Traditional Medicine Research Center, TCM and Ethnomedicine Innovation & Development International Laboratory, Changsha, Hunan, P. R. China, 4108208
| |
Collapse
|
5
|
Yu P, Li Q, Feng Y, Chen Y, Ma S, Ding X. Quantitative Analysis of Flavonoids in Glycyrrhiza uralensis Fisch by 1H-qNMR. JOURNAL OF ANALYTICAL METHODS IN CHEMISTRY 2021; 2021:6655572. [PMID: 33532111 PMCID: PMC7834775 DOI: 10.1155/2021/6655572] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Revised: 12/19/2020] [Accepted: 01/08/2021] [Indexed: 06/12/2023]
Abstract
OBJECTIVE To establish a method for simultaneous determination of liquiritin, liquiritigenin, and isoliquiritinin glycyrrhizin using hydrogen nuclear magnetic resonance quantitative technology (1H-qNMR). Methodology. Deuterated dimethyl sulfoxide was used as the solvent, and dichloromethane was used as the internal standard. The probe temperature was 298.0 K, the pulse sequence was Zg30, the number of scans was 16, and relaxation delay (D1) was 10 s. Quantitative characteristic signal peaks were δ 4.891∼4.878 ppm, δ 8.187∼8.172 ppm, and δ 6.790∼6.776 ppm for liquiritin, isoliquiritin, and liquiritigenin, respectively. RESULTS The experimental result showed that the content of flavonoids in Licorice, from Chifeng, Inner Mongolia, was the highest. CONCLUSION In this study, a new method for determination of three flavonoids in Licorice using 1H-qNMR was established. This experimental method has the advantages of accuracy, efficiency, and economy. It lays a foundation for the study on the determination of flavonoids content in licorice by proton nuclear magnetic resonance spectroscopy.
Collapse
Affiliation(s)
- Ping Yu
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Qian Li
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Yanmei Feng
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Yuying Chen
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Sinan Ma
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Xiaoqin Ding
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| |
Collapse
|
6
|
Hassaine R, El Haci IA, Dergal F, Boukennna L, Khoukh A, Negadi S, Taibi N, Bachari K, Choukchou-Braham N. Hemisynthesis of coumarin derivatives from Ammodaucus leucotrichus oil extract: organobase-catalyzed reaction, analytical study by diffusion-ordered spectroscopy NMR and differential scanning calorimetry. Nat Prod Res 2020; 36:2284-2291. [PMID: 33183085 DOI: 10.1080/14786419.2020.1828408] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
This paper presents an in-depth chemical and analytical study of a natural substance extracted from Ammodaucus leucotrichus Coss. & Dur and its derivatives after hemisynthesis. The analysis was performed using Diffusion-Ordered Spectroscopy (NMR DOSY) and Differential Scanning Calorimetry (DSC) as general methods. The results show an interesting chemical reactivity towards coumarin-derived bisnucleophiles (4-hydroxycoumarin and triacetic acid lactone), and products obtained by hemisynthesis of pyrano[4,3-b]pyrane derivatives following Knoevenagel condensation and Michael's addition on this natural substance with the use of 4-pyrolidinopyridine organobase as catalyst.
Collapse
Affiliation(s)
- Ridha Hassaine
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques CRAPC, Tipaza, Algérie.,Laboratoire de Catalyse et Synthèse en Chimie Organique, Faculté des Sciences, Université de Tlemcen, Tlemcen, Algérie
| | - Imad Abdelhamid El Haci
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques CRAPC, Tipaza, Algérie.,Laboratoire de Produits Naturels, Département de Biologie, Faculté SNV-STU, Université Aboubekr Belkaid, Tlemcen, Algérie
| | - Fayçal Dergal
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques CRAPC, Tipaza, Algérie.,Laboratoire de Catalyse et Synthèse en Chimie Organique, Faculté des Sciences, Université de Tlemcen, Tlemcen, Algérie
| | - Leϊla Boukennna
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques CRAPC, Tipaza, Algérie.,Laboratoire de chimie organique appliquée, Faculté des Chimie, USTHB, Alger, Algérie
| | | | - Sofiane Negadi
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques CRAPC, Tipaza, Algérie.,Laboratoire de Catalyse et Synthèse en Chimie Organique, Faculté des Sciences, Université de Tlemcen, Tlemcen, Algérie
| | - Nadia Taibi
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques CRAPC, Tipaza, Algérie.,Laboratoire de Recherche sur Les Zones Arides (LRZA), Faculté des Sciences Biologiques (FSB), Université des Sciences et de La Technologie Houari Boumediene (USTHB), Bab Ezzouar, Algérie
| | - Khaldoun Bachari
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques CRAPC, Tipaza, Algérie
| | - Noureddine Choukchou-Braham
- Laboratoire de Catalyse et Synthèse en Chimie Organique, Faculté des Sciences, Université de Tlemcen, Tlemcen, Algérie
| |
Collapse
|
7
|
Saito N, Komatsu T, Suematsu T, Miyamoto T, Ihara T. Unique Usage of a Classical Selective Homodecoupling Sequence for High-Resolution Quantitative 1H NMR. Anal Chem 2020; 92:13652-13655. [PMID: 32985865 DOI: 10.1021/acs.analchem.0c03154] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
Classical selective homodecoupling was used in a 1H NMR purity assay to improve accuracy by overcoming spectral overlaps due to 1H-1H spin coupling. Dummy irradiation at a specific frequency was used in addition to irradiation at a 1H resonance of the analyte to avoid irradiation bias. The method was validated in a 1H NMR purity assay of high-purity diethyl phthalate (National Metrology Institute of Japan Certified Reference Material (NMIJ CRM), purity: 99.98%). The obtained purity value biases were 0.27% or less. The utility of the method was demonstrated in another 1H NMR purity assay of dipropyl phthalate (NMIJ CRM, purity: 98.41%), which contained a tiny amount of the structurally similar compound methyl propyl phthalate as an impurity. An accurate assay was achieved with the method, giving a purity of 98.39%, whereas the conventional method gave a purity 99.13%.
Collapse
Affiliation(s)
- Naoki Saito
- National Metrology Institute of Japan, National Institute of Advanced Industrial Science and Technology, 1-1-1 Umezono, Tsukuba, Ibaraki 305-8563, Japan
| | - Takanori Komatsu
- JEOL RESONANCE Inc., 3-1-2 Musashino, Akishima, Tokyo 196-8558, Japan
| | - Takako Suematsu
- JEOL RESONANCE Inc., 3-1-2 Musashino, Akishima, Tokyo 196-8558, Japan
| | - Tetsuo Miyamoto
- JEOL RESONANCE Inc., 3-1-2 Musashino, Akishima, Tokyo 196-8558, Japan
| | - Toshihide Ihara
- National Metrology Institute of Japan, National Institute of Advanced Industrial Science and Technology, 1-1-1 Umezono, Tsukuba, Ibaraki 305-8563, Japan
| |
Collapse
|
8
|
Bak J, Miyazaki Y, Nakano H, Matsui T. Ligand-aided 1H Nuclear Magnetic Resonance Spectroscopy for Non-destructive Estimation of Sulfate Content in Sulfated Saccharides. ANAL SCI 2020; 36:1269-1274. [PMID: 32565527 DOI: 10.2116/analsci.20p163] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Sulfated saccharides exhibit diverse physiological activities, but a lack of any convenient assay hinders their evaluation. Herein, an assay for the analysis of sulfated saccharides is described using 1H nuclear magnetic resonance (NMR) spectroscopy by employing ligands that can form ionic complexes with the sulfate groups. Based on the change in the chemical shift (Δδ) of the ligands by sulfated mono- to tetrasaccharide, imidazole was found to be a good ligand, showing the maximum Δδ; neutral saccharides do not show any change in the δ value. A marked and constant downfield δ value observed was changed dramatically at a molar ratio of >1:1 (imidazole:sulfated saccharides), allowing a sulfate content estimation based on the concentration of imidazole at the Δδ inflection point. By the proposed ligand-aided 1H NMR assay, the sulfate content of natural sulfated polysaccharide, fucoidan, was non-destructively estimated to be 2.1 mmol/g-fucoidan.
Collapse
Affiliation(s)
- Juneha Bak
- Division of Bioresources and Biosciences, Faculty of Agriculture, Graduate School of Kyushu University
| | - Yoshiyuki Miyazaki
- Division of Bioresources and Biosciences, Faculty of Agriculture, Graduate School of Kyushu University.,NPO Research Institute of Fucoidan
| | | | - Toshiro Matsui
- Division of Bioresources and Biosciences, Faculty of Agriculture, Graduate School of Kyushu University
| |
Collapse
|
9
|
Cao R, Liu X, Liu Y, Zhai X, Cao T, Wang A, Qiu J. Applications of nuclear magnetic resonance spectroscopy to the evaluation of complex food constituents. Food Chem 2020; 342:128258. [PMID: 33508899 DOI: 10.1016/j.foodchem.2020.128258] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2020] [Revised: 09/10/2020] [Accepted: 09/27/2020] [Indexed: 11/18/2022]
Abstract
Due to a number of unparalleled advantages such as fastness, accuracy, intactness, nuclear magnetic resonance spectroscopy (NMR) has fulfilled a significant role in determining structures and dynamics of various physical, chemical and biological systems in the field of food analysis. This study introduced the principle of NMR, key NMR techniques such as 1H NMR, DOSY, NOESY, HSQC, etc., and the knowledge of NMR applications on the evaluation of complex food system, especially the interactions of food components. The reviewed research work provides sufficient evidence that NMR spectroscopy has been an invaluable tool and will play an increasingly important role in specific technical support for food assessment. In addition, NMR combined with various other technologies could give a complete picture of the mechanism of the performance of functional food compounds, which are vital for human health and influence the intrinsic food properties during processing, storage and transportation at the molecular level.
Collapse
Affiliation(s)
- Ruge Cao
- Beijing Advanced Innovation Center for Food Nutrition and Human Health, Beijing Technology and Business University, Beijing, China; State Key Laboratory of Food Nutrition and Safety, College of Food Science and Engineering, Tianjin University of Science and Technology, Tianjin 300457, China.
| | - Xinru Liu
- State Key Laboratory of Food Nutrition and Safety, College of Food Science and Engineering, Tianjin University of Science and Technology, Tianjin 300457, China
| | - Yuqian Liu
- State Key Laboratory of Food Nutrition and Safety, College of Food Science and Engineering, Tianjin University of Science and Technology, Tianjin 300457, China
| | - Xuqing Zhai
- State Key Laboratory of Food Nutrition and Safety, College of Food Science and Engineering, Tianjin University of Science and Technology, Tianjin 300457, China
| | - Tianya Cao
- Institute of Food Science and Technology, Henan Agricultural University, Zhengzhou 450000, China
| | - Aili Wang
- Key laboratory of Coarse Cereal Processing (Ministry of Agriculture and Rural Affairs), College of Pharmacy and Biological Engineering, Chengdu University, Chengdu 610106, China
| | - Ju Qiu
- Institute of Food and Nutrition Development, Ministry of Agriculture, Haidian, Beijing 100081, China.
| |
Collapse
|
10
|
Cornejo A, Bimbela F, Moreira R, Hablich K, García-Yoldi Í, Maisterra M, Portugal A, Gandía LM, Martínez-Merino V. Production of Aromatic Compounds by Catalytic Depolymerization of Technical and Downstream Biorefinery Lignins. Biomolecules 2020; 10:E1338. [PMID: 32962141 PMCID: PMC7564559 DOI: 10.3390/biom10091338] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Revised: 08/19/2020] [Accepted: 09/11/2020] [Indexed: 11/16/2022] Open
Abstract
Lignocellulosic materials are promising alternatives to non-renewable fossil sources when producing aromatic compounds. Lignins from Populus salicaceae. Pinus radiata and Pinus pinaster from industrial wastes and biorefinery effluents were isolated and characterized. Lignin was depolymerized using homogenous (NaOH) and heterogeneous (Ni-, Cu- or Ni-Cu-hydrotalcites) base catalysis and catalytic hydrogenolysis using Ru/C. When homogeneous base catalyzed depolymerization (BCD) and Ru/C hydrogenolysis were combined on poplar lignin, the aromatics amount was ca. 11 wt.%. Monomer distributions changed depending on the feedstock and the reaction conditions. Aqueous NaOH produced cleavage of the alkyl side chain that was preserved when using modified hydrotalcite catalysts or Ru/C-catalyzed hydrogenolysis in ethanol. Depolymerization using hydrotalcite catalysts in ethanol produced monomers bearing carbonyl groups on the alkyl side chain. The analysis of the reaction mixtures was done by size exclusion chromatography (SEC) and diffusion ordered nuclear magnetic resonance spectroscopy (DOSY NMR). 31P NMR and heteronuclear single quantum coherence spectroscopy (HSQC) were also used in this study. The content in poly-(hydroxy)-aromatic ethers in the reaction mixtures decreased upon thermal treatments in ethanol. It was concluded that thermo-solvolysis is key in lignin depolymerization, and that the synergistic effect of Ni and Cu provided monomers with oxidized alkyl side chains.
Collapse
Affiliation(s)
- Alfonso Cornejo
- Institute for Advanced Materials and Mathematics (InaMat2) and Department of Sciences, Universidad Pública de Navarra, E31006 Pamplona, Spain; (K.H.); (Í.G.-Y.); (M.M.); (L.M.G.); (V.M.-M.)
| | - Fernando Bimbela
- Institute for Advanced Materials and Mathematics (InaMat2) and Department of Sciences, Universidad Pública de Navarra, E31006 Pamplona, Spain; (K.H.); (Í.G.-Y.); (M.M.); (L.M.G.); (V.M.-M.)
| | - Rui Moreira
- CIEPQPF, FCTUC, Department of Chemical Engineering, University of Coimbra, Rua Sílvio Lima, Pólo II—Pinhal de Marrocos, 3030-790 Coimbra, Portugal; (R.M.); (A.P.)
| | - Karina Hablich
- Institute for Advanced Materials and Mathematics (InaMat2) and Department of Sciences, Universidad Pública de Navarra, E31006 Pamplona, Spain; (K.H.); (Í.G.-Y.); (M.M.); (L.M.G.); (V.M.-M.)
| | - Íñigo García-Yoldi
- Institute for Advanced Materials and Mathematics (InaMat2) and Department of Sciences, Universidad Pública de Navarra, E31006 Pamplona, Spain; (K.H.); (Í.G.-Y.); (M.M.); (L.M.G.); (V.M.-M.)
| | - Maitane Maisterra
- Institute for Advanced Materials and Mathematics (InaMat2) and Department of Sciences, Universidad Pública de Navarra, E31006 Pamplona, Spain; (K.H.); (Í.G.-Y.); (M.M.); (L.M.G.); (V.M.-M.)
| | - António Portugal
- CIEPQPF, FCTUC, Department of Chemical Engineering, University of Coimbra, Rua Sílvio Lima, Pólo II—Pinhal de Marrocos, 3030-790 Coimbra, Portugal; (R.M.); (A.P.)
| | - Luis M. Gandía
- Institute for Advanced Materials and Mathematics (InaMat2) and Department of Sciences, Universidad Pública de Navarra, E31006 Pamplona, Spain; (K.H.); (Í.G.-Y.); (M.M.); (L.M.G.); (V.M.-M.)
| | - Víctor Martínez-Merino
- Institute for Advanced Materials and Mathematics (InaMat2) and Department of Sciences, Universidad Pública de Navarra, E31006 Pamplona, Spain; (K.H.); (Í.G.-Y.); (M.M.); (L.M.G.); (V.M.-M.)
| |
Collapse
|
11
|
Yang L, Li Q, Feng Y, Qiu D. Simultaneous Determination of Three Coumarins in Angelica dahurica by 1H-qNMR Method: A Fast and Validated Method for Crude Drug Quality Control. JOURNAL OF ANALYTICAL METHODS IN CHEMISTRY 2020; 2020:8987560. [PMID: 32280555 PMCID: PMC7128064 DOI: 10.1155/2020/8987560] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/28/2019] [Revised: 11/05/2019] [Accepted: 12/24/2019] [Indexed: 05/09/2023]
Abstract
In this study, a quantitative 1H NMR method (1H-qNMR) for determining the contents of imperatorin, byakangelicin, and oxypeucedanin in A. dahurica in traditional Chinese medicine (TCM) has been established. Dried plant material was extracted exhaustively with methanol by an ultrasonication-assisted extraction method. The 1H-qNMR measurements were performed on a 600 -MHz spectrometer with hydroquinone as the internal standard reference in deuterated dimethyl sulfoxide (DMSO-d6) solvent. Quantification was carried out using the 1H resonance signals at 6.55 ppm for hydroquinone and 7.68, 7.38-7.39, and 6.38-6.39 ppm for imperatorin, byakangelicin, and oxypeucedanin, respectively. The linearity, limit of detection (LOD), limit of quantitation (LOQ), precision, reproducibility, stability, and recovery of the methodology were evaluated, and results were good. The newly developed method has been applied to determine the three coumarins in A. dahurica.
Collapse
Affiliation(s)
- Lan Yang
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Qian Li
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Yanmei Feng
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| | - Daiyu Qiu
- Gansu Provincial Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China
| |
Collapse
|
12
|
Arrabal-Campos FM, Aguilera-Sáez LM, Fernández I. Algebraic Reconstruction Technique for Diffusion NMR Experiments. Application to the Molecular Weight Prediction of Polymers. J Phys Chem A 2019; 123:943-950. [DOI: 10.1021/acs.jpca.8b08584] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Francisco M. Arrabal-Campos
- Department of Chemistry and Physics, Research Centre CIAIMBITAL, Universidad de Almería, Ctra. Sacramento, s/n, Almería, E-04120, Spain
| | - Luis M. Aguilera-Sáez
- Department of Chemistry and Physics, Research Centre CIAIMBITAL, Universidad de Almería, Ctra. Sacramento, s/n, Almería, E-04120, Spain
| | - Ignacio Fernández
- Department of Chemistry and Physics, Research Centre CIAIMBITAL, Universidad de Almería, Ctra. Sacramento, s/n, Almería, E-04120, Spain
| |
Collapse
|
13
|
Arrabal-Campos FM, Álvarez JD, García-Sancho A, Fernández I. Molecular weight prediction in polystyrene blends. Unprecedented use of a genetic algorithm in pulse field gradient spin echo (PGSE) NMR. SOFT MATTER 2017; 13:6620-6626. [PMID: 28920614 DOI: 10.1039/c7sm01569k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
A genetic algorithm that uses boxcar functions (diffGA) has been applied for the first time in PGSE NMR. It reconstructs accurate diffusion coefficients for all the components of the mixture, and therefore predicts correct weight-average molecular weights for all of them. The results reported herein complement those obtained with established methods such as ITAMeD, CONTIN and TRAIn algorithms, and provide a detailed solution picture. Its robustness and limits have been stretched in order to ascertain the minimum separation within diffusion coefficients or relative proportion between components. In addition, the new genetic algorithm has been also applied to a mixture of small molecules, providing excellent results at very low computational times.
Collapse
Affiliation(s)
- Francisco M Arrabal-Campos
- Department of Chemistry and Physics, Research Centre for Agricultural and Food Biotechnology (BITAL), University of Almería, Ctra. Sacramento, s/n, 04120, Almería, Spain.
| | | | | | | |
Collapse
|
14
|
Andjelković U, Šrajer Gajdošik M, Gašo-Sokač D, Martinović T, Josić D. Foodomics and Food Safety: Where We Are. Food Technol Biotechnol 2017; 55:290-307. [PMID: 29089845 PMCID: PMC5654429 DOI: 10.17113/ftb.55.03.17.5044] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2016] [Accepted: 05/31/2017] [Indexed: 12/21/2022] Open
Abstract
The power of foodomics as a discipline that is now broadly used for quality assurance of food products and adulteration identification, as well as for determining the safety of food, is presented. Concerning sample preparation and application, maintenance of highly sophisticated instruments for both high-performance and high-throughput techniques, and analysis and data interpretation, special attention has to be paid to the development of skilled analysts. The obtained data shall be integrated under a strong bioinformatics environment. Modern mass spectrometry is an extremely powerful analytical tool since it can provide direct qualitative and quantitative information about a molecule of interest from only a minute amount of sample. Quality of this information is influenced by the sample preparation procedure, the type of mass spectrometer used and the analyst's skills. Technical advances are bringing new instruments of increased sensitivity, resolution and speed to the market. Other methods presented here give additional information and can be used as complementary tools to mass spectrometry or for validation of obtained results. Genomics and transcriptomics, as well as affinity-based methods, still have a broad use in food analysis. Serious drawbacks of some of them, especially the affinity-based methods, are the cross-reactivity between similar molecules and the influence of complex food matrices. However, these techniques can be used for pre-screening in order to reduce the large number of samples. Great progress has been made in the application of bioinformatics in foodomics. These developments enabled processing of large amounts of generated data for both identification and quantification, and for corresponding modeling.
Collapse
Affiliation(s)
- Uroš Andjelković
- Department of Biotechnology, University of Rijeka, Radmile Matejčić 2, HR-51000 Rijeka, Croatia
- Department of Chemistry, Institute of Chemistry, Technology and Metallurgy, University of Belgrade, Njegoševa 12, RS-11000 Belgrade, Serbia
| | - Martina Šrajer Gajdošik
- Department of Chemistry, J. J. Strossmayer University of Osijek, Cara Hadrijana 8/A, HR-31000 Osijek, Croatia
| | - Dajana Gašo-Sokač
- Faculty of Food Technology, J. J. Strossmayer University of Osijek, Franje Kuhača 20, HR-31000 Osijek, Croatia
| | - Tamara Martinović
- Department of Biotechnology, University of Rijeka, Radmile Matejčić 2, HR-51000 Rijeka, Croatia
| | - Djuro Josić
- Department of Biotechnology, University of Rijeka, Radmile Matejčić 2, HR-51000 Rijeka, Croatia
- Warren Alpert Medical School, Brown University, 222 Richmond St, Providence, RI 02903, USA
| |
Collapse
|
15
|
Fang Y, Yushmanov PV, Furó I. Assessing 2D electrophoretic mobility spectroscopy (2D MOSY) for analytical applications. MAGNETIC RESONANCE IN CHEMISTRY : MRC 2017; 55:584-588. [PMID: 27930812 PMCID: PMC5434926 DOI: 10.1002/mrc.4558] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2016] [Revised: 11/29/2016] [Accepted: 11/30/2016] [Indexed: 06/06/2023]
Abstract
Electrophoretic displacement of charged entity phase modulates the spectrum acquired in electrophoretic NMR experiments, and this modulation can be presented via 2D FT as 2D mobility spectroscopy (MOSY) spectra. We compare in various mixed solutions the chemical selectivity provided by 2D MOSY spectra with that provided by 2D diffusion-ordered spectroscopy (DOSY) spectra and demonstrate, under the conditions explored, a superior performance of the former method. 2D MOSY compares also favourably with closely related LC-NMR methods. The shape of 2D MOSY spectra in complex mixtures is strongly modulated by the pH of the sample, a feature that has potential for areas such as in drug discovery and metabolomics. Copyright © 2016 The Authors. Magnetic Resonance in Chemistry published by John Wiley & Sons Ltd.
Collapse
Affiliation(s)
- Yuan Fang
- Division of Applied Physical Chemistry, Department of ChemistryKTH Royal Institute of TechnologyTeknikringen 30SE‐10044StockholmSweden
| | | | - István Furó
- Division of Applied Physical Chemistry, Department of ChemistryKTH Royal Institute of TechnologyTeknikringen 30SE‐10044StockholmSweden
| |
Collapse
|
16
|
Cao R, Yang X, Strappe P, Blanchard C, Zhou Z. Natural products derived from tea on the solubility of hesperidin by LC-TOF/MS and NMR. INTERNATIONAL JOURNAL OF FOOD PROPERTIES 2017. [DOI: 10.1080/10942912.2017.1295258] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Ruge Cao
- Key Laboratory of Food Nutrition and Safety, Ministry of Education, Tianjin University of Science and Technology, Tianjin, China
| | - Xue Yang
- Key Laboratory of Food Nutrition and Safety, Ministry of Education, Tianjin University of Science and Technology, Tianjin, China
| | - Padraig Strappe
- ARC Industrial Transformation Training Centre for Functional Grains, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Chris Blanchard
- ARC Industrial Transformation Training Centre for Functional Grains, Charles Sturt University, Wagga Wagga, NSW, Australia
| | - Zhongkai Zhou
- Key Laboratory of Food Nutrition and Safety, Ministry of Education, Tianjin University of Science and Technology, Tianjin, China
- ARC Industrial Transformation Training Centre for Functional Grains, Charles Sturt University, Wagga Wagga, NSW, Australia
| |
Collapse
|
17
|
Pagès G, Gilard V, Martino R, Malet-Martino M. Pulsed-field gradient nuclear magnetic resonance measurements (PFG NMR) for diffusion ordered spectroscopy (DOSY) mapping. Analyst 2017; 142:3771-3796. [DOI: 10.1039/c7an01031a] [Citation(s) in RCA: 74] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
The advent of Diffusion Ordered SpectroscopY (DOSY) NMR has enabled diffusion coefficients to be routinely measured and used to characterize chemical systems in solution. Indeed, DOSY NMR allows the separation of the chemical entities present in multicomponent systems and provides information on their intermolecular interactions as well as on their size and shape.
Collapse
Affiliation(s)
- G. Pagès
- INRA
- AgroResonance – UR370 Qualité des Produits Animaux
- Saint Genès Champanelle
- France
| | - V. Gilard
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| | - R. Martino
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| | - M. Malet-Martino
- Groupe de RMN Biomédicale
- Laboratoire de Synthèse et Physicochimie de Molécules d'Intérêt Biologique
- UMR CNRS 5068
- Université de Toulouse
- 31062 Toulouse cedex 9
| |
Collapse
|
18
|
|
19
|
Evaluating the Reduced Hydrophobic Taste Sensor Response of Dipeptides by Theasinensin A by Using NMR and Quantum Mechanical Analyses. PLoS One 2016; 11:e0157315. [PMID: 27309380 PMCID: PMC4911063 DOI: 10.1371/journal.pone.0157315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2016] [Accepted: 05/29/2016] [Indexed: 11/22/2022] Open
Abstract
The current study demonstrated that theasinensin A (TSA) had a potential to form the complex with hydrophobic Trp-containing dipeptides, and to reduce their membrane potential by artificial-lipid membrane taste sensor. At a 1:3 molar ratio of the 6 Trp-containing dipeptides together with TSA, we observed a significant chemical shift of the protons of the dipeptides (Δδ) to a high magnetic field, when analyzed using 1H-nuclear-magnetic resonance (NMR) spectroscopy. The Δδ values were correlated with the hydrophobicity (log P) of the dipeptides and significant correlations were obtained (P = 0.022, R2 = 0.77); e.g., Trp-Leu with the highest log P value of 1.623 among the tested dipeptides showed the highest Δδ value of 0.105 ppm for the H7 proton of Trp-Leu, while less chemical shifts were observed in theasinensin B and epigallocatechin-3-O-gallate. Diffusion-ordered NMR spectroscopy revealed that the diffusion coefficient of 3 mM of Trp-Leu (7.6 × 10−11 m2/s) at a pulse field gradient in the range 0.05–0.3 T/m decreased in the presence of 3 mM TSA (6.6 × 10−11 m2/s), suggesting that Trp-Leu forms a complex with TSA. Quantum mechanical calculations and rotating frame nuclear Overhauser effect-NMR spectroscopy provided configuration information on the geometry of the complex that Trp-Leu formed with TSA (1:1 complex) with a ΔG energy of –8.7 kJ/mol. A sensor analysis using artificial-lipid membranes demonstrated that the changes in membrane potential of 1 mM Trp-Leu (21.8 ± 1.3 mV) and Leu-Trp (5.3 ± 0.9 mV) were significantly (P < 0.001) reduced by 1 mM TSA (Trp-Leu, 13.1 ± 2.4 mV; Leu-Trp, 3.5 ± 0.5 mV; TSA alone, 0.2 ± 0.01 mV), indicating the effective suppression of hydrophobicity of dipeptides by TSA-formed complex.
Collapse
|
20
|
Cherifi N, Khoukh A, Benaboura A, Billon L. Diffusion-ordered spectroscopy NMR DOSY: an all-in-one tool to simultaneously follow side reactions, livingness and molar masses of polymethylmethacrylate by nitroxide mediated polymerization. Polym Chem 2016. [DOI: 10.1039/c6py00927a] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
From diffusion coefficients measurement by NMR DOSY, weight average molar masses Mw, non-reversible termination or livingness of the PMMA chains were simultaneously followed.
Collapse
Affiliation(s)
- N. Cherifi
- Centre de Recherche Scientifique et Technique en Analyses Physico-Chimiques
- RP 42004 Tipaza
- Algeria
- Université des Sciences et Technique Houari Boumedienne
- Faculté de Chimie
| | - A. Khoukh
- Université de Pau et des Pays de l'Adour
- CNRS
- IPREM - Equipe de Physique et Chimie des Polymères
- UMR 5254
- Hélioparc
| | - A. Benaboura
- Université des Sciences et Technique Houari Boumedienne
- Faculté de Chimie
- Laboratoire de Synthèse Macromoleculaire et Thio-Organique Macromoléculaire
- 16111 Alger
- Algeria
| | - L. Billon
- Université de Pau et des Pays de l'Adour
- CNRS
- IPREM - Equipe de Physique et Chimie des Polymères
- UMR 5254
- Hélioparc
| |
Collapse
|
21
|
Trimigno A, Marincola FC, Dellarosa N, Picone G, Laghi L. Definition of food quality by NMR-based foodomics. Curr Opin Food Sci 2015. [DOI: 10.1016/j.cofs.2015.06.008] [Citation(s) in RCA: 53] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|
22
|
Cao R, Kobayashi Y, Nonaka A, Miyata Y, Tanaka K, Tanaka T, Matsui T. NMR Spectroscopic and Quantum Mechanical Analyses of Enhanced Solubilization of Hesperidin by Theasinensin A. Pharm Res 2015; 32:2301-9. [DOI: 10.1007/s11095-015-1621-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2014] [Accepted: 01/05/2015] [Indexed: 01/04/2023]
|