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Bisker C, Taylor G, Carney H, Orr CH, Javan GT, Ralebitso-Senior TK. Comparative soil bacterial metabarcoding after aboveground vs. subsurface decomposition of Mus musculus. Sci Rep 2024; 14:31179. [PMID: 39732855 DOI: 10.1038/s41598-024-82437-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2023] [Accepted: 12/05/2024] [Indexed: 12/30/2024] Open
Abstract
Outdoor microcosms, metabarcoding with next-generation sequencing of the 16S rRNA bacterial gene, total body score (TBS) and physicochemical analyses were used to monitor Mus musculus decomposition aboveground (A) and in the subsurface (S), and compared to soil-only controls (C). As determined by MaAsLin2 analysis, significant shifts in bacterial communities at 30 cm depths within the A, S and C treatments distinguished control from experimental soils, and between aboveground and subsurface deposition, demonstrating the potential for gravesoil discrimination during the first 90 days. For example, Dokdonella (p = 0.0002), Edaphobaculum (p = 0.0004) and Lacibacter (p = 0.0034) recorded significant shifts relative to sampling time. Furthermore, Massilia (p = 0.0005), Mycobacterium (p = 0.0006) and Sandaracinus (p = 0.0007) increased in abundance for the aboveground mice treatments. This was confirmed with ANOSIM where p = 0.0082 showed statistically significant difference between the aboveground and subsurface deposition. TBS and physicochemical analyses suggested that nutrient release into the soils occurred during active decay and skin rapture on days 7-13 in the subsurface and days 13-20 aboveground, with a particular increase in soil potassium concentration on day 15. Significant differences in soil temperatures resulted between A and S vs. C microcosms, aligning with atmospheric temperature changes. In summary, complementary application of metabarcoding, total body score, exogenous and physicochemical methods for postmortem interval estimation and clandestine grave location highlighted the feasibility of using temperature records downloaded from meteorological stations and portable X-ray fluorescence as indicators for various phases of decomposition.
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Affiliation(s)
- Chawki Bisker
- National Institute of Criminalistics and Criminology, Bouchaoui, Algiers, Algeria
- School of Health and Life Sciences, Teesside University, Middlesbrough, UK
| | - Gillian Taylor
- School of Health and Life Sciences, Teesside University, Middlesbrough, UK
- National Horizons Centre, Darlington, UK
| | - Helen Carney
- School of Health and Life Sciences, Teesside University, Middlesbrough, UK
- National Horizons Centre, Darlington, UK
| | - Caroline H Orr
- School of Health and Life Sciences, Teesside University, Middlesbrough, UK
- National Horizons Centre, Darlington, UK
| | - Gulnaz T Javan
- Department of Physical Sciences and Forensic Science Programs, Alabama State University, Montgomery, AL, USA
| | - Theresia Komang Ralebitso-Senior
- School of Health and Life Sciences, Teesside University, Middlesbrough, UK.
- School of Pharmacy and Biomolecular Science, Liverpool John Moores University, Liverpool, UK.
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Caballero-Moreno L, Luna A, Legaz I. Lipidomes in Cadaveric Decomposition and Determination of the Postmortem Interval: A Systematic Review. Int J Mol Sci 2024; 25:984. [PMID: 38256058 PMCID: PMC10816357 DOI: 10.3390/ijms25020984] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2023] [Revised: 01/02/2024] [Accepted: 01/09/2024] [Indexed: 01/24/2024] Open
Abstract
Lipids are a large group of natural compounds, together with proteins and carbohydrates, and are essential for various processes in the body. After death, the organism's tissues undergo a series of reactions that generate changes in some molecules, including lipids. This means that determining the lipid change profile can be beneficial in estimating the postmortem interval (PMI). These changes can also help determine burial sites and advance the localization of graves. The aim was to explore and analyze the decomposition process of corpses, focusing on the transformation of lipids, especially triglycerides (TGs) and fatty acids (FAs), and the possible application of these compounds as markers to estimate PMI and detect burial sites. A systematic review of 24 scientific articles from the last 23 years (2000-2023) was conducted. The results show that membrane glycerophospholipids (such as phosphatidylcholine and phosphatidylglycerol, among others) are the most studied, and the most promising results are obtained, with decreasing patterns as PMI varies. Fatty acids (FAs) are also identified as potential biomarkers owing to the variations in their postmortem concentration. An increase in saturated fatty acids (SFAs), such as stearic acid and palmitic acid, and a decrease in unsaturated fatty acids (UFAs), such as oleic acid and linoleic acid, were observed. The importance of intrinsic and extrinsic factors in decomposition is also observed. Finally, as for the burial sites, the presence of fatty acids and some sterols in burial areas of animal and human remains can be verified. In conclusion, glycerophospholipids and fatty acids are good markers for estimating PMI. It has been observed that there are still no equations for estimating the PMI that can be applied to forensic practice, as intrinsic and extrinsic factors are seen to play a vital role in the decomposition process. As for determining burial sites, the importance of soil and textile samples has been demonstrated, showing a direct relationship between saturated fatty acids, hydroxy fatty acids, and some sterols with decomposing remains.
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Affiliation(s)
| | | | - Isabel Legaz
- Department of Legal and Forensic Medicine, Biomedical Research Institute of Murcia (IMIB), Regional Campus of International Excellence “Campus Mare Nostrum”, Faculty of Medicine, University of Murcia (UMU), El Palmar, 30120 Murcia, Spain; (L.C.-M.); (A.L.)
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3
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Berezowski V, Moffat I, Seckiner D, Crebert I, Ellis J, Mallett X. The suitability of using domestic pigs (Sus spp.) as human proxies in the geophysical detection of clandestine graves. J Forensic Sci 2024; 69:316-328. [PMID: 37904624 DOI: 10.1111/1556-4029.15419] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2023] [Revised: 10/19/2023] [Accepted: 10/19/2023] [Indexed: 11/01/2023]
Abstract
Research in many forensic science fields commonly uses domestic pigs (Sus spp.) as proxies for human remains, due to their physiological and anatomical similarities, as well as being more readily available. Unfortunately, previous research, especially that which compares the decompositional process, has shown that pigs are not appropriate proxies for humans. To date, there has not been any published research that specifically addresses whether domestic pigs are adequate human proxies for the geophysical detection of clandestine graves. As such, the aim of this paper was to compare the geophysical responses of pig cadavers and human donor graves, in order to determine if pigs can indeed be used as adequate human proxies. To accomplish this, ground penetrating radar (GPR) and electrical resistivity tomography (ERT) responses on single and multiple pig cadaver graves were compared to single and multiple human donor graves, all of which are in known locations within the same geological environment. The results showed that under field conditions, both GPR and ERT were successful at observing human and pig burials, with no obvious differences between the detected geophysical responses. The results also showed that there were no differences in the geophysical responses of those who were clothed and unclothed. The similarity of the responses may reflect that the geophysical techniques can detect graves despite what their contents are. The study implications suggest that experimental studies in other soil and climate conditions can be easily replicated, benefiting law enforcement with missing persons cases.
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Affiliation(s)
- Victoria Berezowski
- School of Law and Justice, University of Newcastle, New South Wales, Australia
| | - Ian Moffat
- Archaeology, Flinders University, South Australia, Australia
| | - Dilan Seckiner
- School of Biomedical Sciences, University of New South Wales, Sydney, Australia
| | - Isabella Crebert
- School of Law and Justice, University of Newcastle, New South Wales, Australia
| | - Justin Ellis
- School of Law and Justice, University of Newcastle, New South Wales, Australia
| | - Xanthé Mallett
- School of Law and Justice, University of Newcastle, New South Wales, Australia
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Sousa Queirós S, von der Lühe B, Silva-Bessa A, Machado Brito-da-Costa A, Morais Caldas I, Dawson L, Madureira-Carvalho Á. Lipidic compounds found in soils surrounding human decomposing bodies and its use in forensic investigations – a narrative review. Sci Justice 2023; 63:303-312. [PMID: 37169455 DOI: 10.1016/j.scijus.2023.02.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/17/2022] [Revised: 01/31/2023] [Accepted: 02/13/2023] [Indexed: 02/18/2023]
Abstract
Following decomposition of a human body, a variety of decomposition products, such as lipids, are released into the surrounding environment, e.g. soils. The long-lasting preservation in soils and their high diagnostic potential have been neglected in forensic research. Furthermore, little is known about the preservation, chemical transformation, or degradation of those human derived lipids in soils. To date, several studies identified various lipids such as long-chain free fatty acids and steroids in soils that contained decomposition fluids. Those lipids are preserved in soils over time and could serve as markers of human decomposition in forensic investigations, e.g. for estimating the post-mortem interval or identifying the burial location of a human body. Therefore, this review focuses on the current literature regarding fatty acid and steroid that have been detected in soils and associated with human body decomposition. After a short introduction about human decomposition processes, this review summarises fatty acid and steroid analysis applied in current case studies and studies related to taphonomic research. This review provides an overview of the available studies that have used fatty acids and steroids as identifiers of human decomposition fluid in soils in a forensic context and discusses the potential for developing this innovative field of research with direct application in a forensic context.
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Collins S, Stuart B, Ueland M. The use of lipids from textiles as soft-tissue biomarkers of human decomposition. Forensic Sci Int 2023; 343:111547. [PMID: 36608407 DOI: 10.1016/j.forsciint.2022.111547] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2022] [Revised: 10/13/2022] [Accepted: 12/22/2022] [Indexed: 12/25/2022]
Abstract
The ability to determine the post-mortem interval (PMI) in complex death investigations involving human remains, is a vital task faced by law enforcement. Establishing the PMI in a case can significantly aid in the reconstruction of forensically relevant events surrounding that death. However, due to the complexities surrounding the decomposition of human remains, the determination of the PMI still remains a challenge in some cases. Thus, the identification of biomarkers of human decomposition are an emerging, and essential, area of research. Previous studies have also demonstrated great success in the use of textiles as a host to indirectly capture decomposition by-products. This study reports the successful adaptation and optimisation of an analytical chemical workflow for the targeted analysis of lipids from textiles associated with decomposing human remains using gas-chromatography (GC) coupled with tandem mass spectrometry (MS/MS). This study discusses novel information regarding the complex challenges of matrix effects observed with decomposition samples. In addition, the first lipid profiles obtained from textiles associated with two decomposing human donors from the Australian Facility for Taphonomic Experimental Research (AFTER) using GC-MS/MS are presented.
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Affiliation(s)
- Sharni Collins
- Centre for Forensic Science, University of Technology Sydney, 15 Broadway, Ultimo, NSW 2007, Australia
| | - Barbara Stuart
- Centre for Forensic Science, University of Technology Sydney, 15 Broadway, Ultimo, NSW 2007, Australia
| | - Maiken Ueland
- Centre for Forensic Science, University of Technology Sydney, 15 Broadway, Ultimo, NSW 2007, Australia.
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Seckiner D, Ebert L, Mallett X, Berry R, Green H, Franckenberg S, Berezowski T, Crebert I, Thali M, Sieberth T. A technical protocol for 3D observation and documentation of human decomposition. AUST J FORENSIC SCI 2022. [DOI: 10.1080/00450618.2022.2146189] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Affiliation(s)
- Dilan Seckiner
- 3D Center Zurich, Institute of Forensic Medicine, University of Zurich, Zurich, Switzerland
- Centre for Forensic Science, University of Technology, Sydney, Australia
| | - Lars Ebert
- 3D Center Zurich, Institute of Forensic Medicine, University of Zurich, Zurich, Switzerland
| | - Xanthé Mallett
- Newcastle Law School, University of Newcastle, Australia
- Honorary Associate in the Faculty of Science, University of Technology Sydney, Sydney Australia
| | - Rachel Berry
- School of Biomedical Sciences, University of New South Wales, Sydney, Australia
| | - Hayley Green
- School of Science, Western Sydney University, Sydney, Australia
| | - Sabine Franckenberg
- 3D Center Zurich, Institute of Forensic Medicine, University of Zurich, Zurich, Switzerland
- Institute of Diagnostic and Interventional Radiology, University Hospital Zurich, Switzerland
| | | | | | - Michael Thali
- 3D Center Zurich, Institute of Forensic Medicine, University of Zurich, Zurich, Switzerland
| | - Till Sieberth
- 3D Center Zurich, Institute of Forensic Medicine, University of Zurich, Zurich, Switzerland
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Collins S, Maestrini L, Ueland M, Stuart B. A preliminary investigation to determine the suitability of pigs as human analogues for post-mortem lipid analysis. TALANTA OPEN 2022. [DOI: 10.1016/j.talo.2022.100100] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
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Collins S, Stuart B, Ueland M. Anatomical location dependence of human decomposition products in clothing. AUST J FORENSIC SCI 2021. [DOI: 10.1080/00450618.2021.1981443] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Sharni Collins
- Centre for Forensic Science, University of Technology Sydney, Ultimo, NSW, Australia
| | - Barbara Stuart
- Centre for Forensic Science, University of Technology Sydney, Ultimo, NSW, Australia
| | - Maiken Ueland
- Centre for Forensic Science, University of Technology Sydney, Ultimo, NSW, Australia
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La Nasa J, Modugno F, Degano I. Liquid chromatography and mass spectrometry for the analysis of acylglycerols in art and archeology. MASS SPECTROMETRY REVIEWS 2021; 40:381-407. [PMID: 32643188 DOI: 10.1002/mas.21644] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2019] [Revised: 05/29/2020] [Accepted: 06/22/2020] [Indexed: 06/11/2023]
Abstract
Lipid characterization in art and archeology, together with the study of lipid degradation processes, is an important research area in heritage science. Lipid-based materials have been used as food since ancient times, but also employed as illuminants and as ingredients in cosmetic, ritual, and pharmaceutical preparations. Both animal and plant lipids have also been processed to produce materials used in art and crafts, such as paint binders, varnishes, waterproofing agents, and coatings. Identifying the origin of the lipid materials is challenging when they are found in association with artistic historical objects. This is due to the inherent complex composition of lipids, their widespread occurrence, and the chemical alterations induced by ageing. The most common approach for lipid characterization in heritage objects entails profiling fatty acids by gas chromatography/mass spectrometry after saponification or transesterification. New developments in high-performance liquid chromatography coupled with mass spectrometry (HPLC-MS) for the characterization of acylglycerols, together with more efficient sample treatments, have fostered the introduction of liquid chromatography for characterizing the lipid profile in heritage objects. This review reports the latest developments and applications of HPLC-MS for the characterization of lipid materials in the field of heritage science. We describe the various approaches for sample pretreatment and highlight the advantages and limitations of HPLC-MS in the analysis of paint and archeological samples. © 2020 John Wiley & Sons Ltd.
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Affiliation(s)
- Jacopo La Nasa
- Department of Chemistry and Industrial Chemistry, University of Pisa, Via Giuseppe Moruzzi 13, Pisa, 56124, Italy
| | - Francesca Modugno
- Department of Chemistry and Industrial Chemistry, University of Pisa, Via Giuseppe Moruzzi 13, Pisa, 56124, Italy
| | - Ilaria Degano
- Department of Chemistry and Industrial Chemistry, University of Pisa, Via Giuseppe Moruzzi 13, Pisa, 56124, Italy
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Aitkenhead-Peterson JA, Fancher JP, Alexander MB, Hamilton MD, Bytheway JA, Wescott DJ. Estimating postmortem interval for human cadavers in a sub-tropical climate using UV-Vis-near-infrared Spectroscopy. J Forensic Sci 2020; 66:190-201. [PMID: 32976653 DOI: 10.1111/1556-4029.14579] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Revised: 08/27/2020] [Accepted: 08/31/2020] [Indexed: 11/30/2022]
Abstract
Estimating postmortem interval (PMI) of surface found skeletal remains is challenging. This novel study used UV-Vis-NIR spectroscopy to scan soil collected from cadaver decomposition islands (CDIs) ranging from 15- to 963-d postmortem and control soils. A decomposition product spectra model (DPS model) was constructed by deducting the control soil spectra from the CDI soil spectra for the estimation of postmortem indices: PMI (d), ADD4 , ADD10 , and ADD20 . The DPS model (n = 55) was calibrated and subjected to a full cross-validation. Calibration R2 and RPD for the DPS model ranged from 0.97 to 0.99 and from 6.1 to 9.9, respectively, for the four postmortem interval indices. Validation R2 and RPD for the DPS model ranged from 0.73 to 0.80 and from 1.9 to 2.2, respectively. The DPS model estimated postmortem intervals for three test CDIs in a clay soil under perennial grassland (test set 1; n = 3) and six CDIs in a sandy soil under a loblolly pine forest (test set 2; n = 6). Test set 1 had PMI prediction ranges from -69 to -117 days, -796 to +832 ADD4 , +552 to +2672 ADD10 , and -478 to -20 ADD20 of observed PMI. Test set 2 PMI prediction ranged from -198 to -65 days, -9923 to +2629 ADD4 , -6724 to +1321 ADD10 , and -2850 to +540 ADD20 of observed PMI. Test set 2 had poor predictions for two CDIs, for all measures of postmortem indices resulting in discussion of sampling depth, effect of body mass index (BMI), and scavenging.
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Affiliation(s)
| | - James P Fancher
- Department of Anthropology, Forensic Anthropology Center at Texas State, Texas State University, San Marcos, TX, USA
| | - Michael B Alexander
- Department of Soil and Crop Sciences, Texas A&M University, College Station, TX, USA
| | - Michelle D Hamilton
- Department of Anthropology, Forensic Anthropology Center at Texas State, Texas State University, San Marcos, TX, USA
| | - Joan A Bytheway
- Southeast Texas Applied Forensic Science facility, Sam Houston State University, Huntsville, TX, USA
| | - Daniel J Wescott
- Department of Anthropology, Forensic Anthropology Center at Texas State, Texas State University, San Marcos, TX, USA
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Soil chemical markers distinguishing human and pig decomposition islands: a preliminary study. Forensic Sci Med Pathol 2020; 16:605-612. [DOI: 10.1007/s12024-020-00297-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/03/2020] [Indexed: 10/23/2022]
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12
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Collins S, Stuart B, Ueland M. Monitoring human decomposition products collected in clothing: an infrared spectroscopy study. AUST J FORENSIC SCI 2019. [DOI: 10.1080/00450618.2019.1593504] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Sharni Collins
- Centre for Forensic Science, University of Technology Sydney, Ultimo, Australia
| | - Barbara Stuart
- Centre for Forensic Science, University of Technology Sydney, Ultimo, Australia
| | - Maiken Ueland
- Centre for Forensic Science, University of Technology Sydney, Ultimo, Australia
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Williams A, Rogers C, Cassella J. Why does the UK need a Human Taphonomy Facility? Forensic Sci Int 2019; 296:74-79. [DOI: 10.1016/j.forsciint.2019.01.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2018] [Revised: 08/16/2018] [Accepted: 01/11/2019] [Indexed: 10/27/2022]
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The validation of 'universal' PMI methods for the estimation of time since death in temperate Australian climates. Forensic Sci Int 2018; 291:158-166. [PMID: 30216841 DOI: 10.1016/j.forsciint.2018.08.022] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2018] [Revised: 08/09/2018] [Accepted: 08/20/2018] [Indexed: 11/20/2022]
Abstract
Forensic anthropologists have traditionally relied on their knowledge and experience of the decomposition stages to make an assessment of the time since death. However, recently new and empirical methods have been developed in various regions worldwide that propose to estimate the post-mortem interval (PMI) based on the observed decomposition changes alongside important taphonomic variables. Yet despite these methods being predominantly geographic specific, a number of methods have suggested they are effective universally and it is these 'universal' methods that have been inadequately test in Australia. The current study evaluated the accuracy of two of these methods in an Australian context, specifically the Greater Western Sydney region. The protocol developed by Megyesi et al. (2005) [1] was investigated because it is commonly cited in the literature and the PMI formula created by Vass (2011) [2] was also investigated because of its 'universal' claim. Between December 2014 and March 2016, two experimental trials were undertaken during the Australian summer seasons. Sixteen adult pig carcasses were left to decompose undisturbed on a soil surface common throughout the Western Sydney region and the Megyesi et al. (2005) [1] and Vass (2011) [2] methods were applied to the remains during this period. The results showed the Megyesi et al. (2005) [1] method overestimated the known PMI of remains, whereas the Vass (2011) [2] formula underestimated the time since death of the remains in these trials. The inaccuracy may be attributed to the constants which make up the variables in these formulas and they may not reflect the values of these variables in the Western Sydney region.
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