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Song Q, Zhao F, Hou L, Miao M. Cellular interactions and evolutionary origins of endosymbiotic relationships with ciliates. THE ISME JOURNAL 2024; 18:wrae117. [PMID: 38916437 PMCID: PMC11253213 DOI: 10.1093/ismejo/wrae117] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2024] [Revised: 05/26/2024] [Accepted: 06/21/2024] [Indexed: 06/26/2024]
Abstract
As unicellular predators, ciliates engage in close associations with diverse microbes, laying the foundation for the establishment of endosymbiosis. Originally heterotrophic, ciliates demonstrate the ability to acquire phototrophy by phagocytizing unicellular algae or by sequestering algal plastids. This adaptation enables them to gain photosynthate and develop resistance to unfavorable environmental conditions. The integration of acquired phototrophy with intrinsic phagotrophy results in a trophic mode known as mixotrophy. Additionally, ciliates can harbor thousands of bacteria in various intracellular regions, including the cytoplasm and nucleus, exhibiting species specificity. Under prolonged and specific selective pressure within hosts, bacterial endosymbionts evolve unique lifestyles and undergo particular reductions in metabolic activities. Investigating the research advancements in various endosymbiotic cases within ciliates will contribute to elucidate patterns in cellular interaction and unravel the evolutionary origins of complex traits.
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Affiliation(s)
- Qi Song
- Medical School, University of Chinese Academy of Sciences, No. 1 Yanqihu East Road, Huairou District, Beijing 100049, China
| | - Fangqing Zhao
- Medical School, University of Chinese Academy of Sciences, No. 1 Yanqihu East Road, Huairou District, Beijing 100049, China
- Institute of Zoology, Chinese Academy of Sciences, 1 Beichen West Road, Chaoyang District, Beijing 100101, China
- Key Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, No. 1 Xiangshan Road, Hangzhou 310024, China
| | - Lina Hou
- Medical School, University of Chinese Academy of Sciences, No. 1 Yanqihu East Road, Huairou District, Beijing 100049, China
| | - Miao Miao
- Medical School, University of Chinese Academy of Sciences, No. 1 Yanqihu East Road, Huairou District, Beijing 100049, China
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Drumm K, Norlin A, Kim M, Altenburger A, Juel Hansen P. Physiological Responses of Mesodinium major to Irradiance, Prey Concentration and Prey Starvation. J Eukaryot Microbiol 2021; 68:e12854. [PMID: 33866638 DOI: 10.1111/jeu.12854] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2021] [Accepted: 03/31/2021] [Indexed: 11/30/2022]
Abstract
Ciliates within the Mesodinium rubrum/Mesodinium major species complex harbor chloroplasts and other cell organelles from specific cryptophyte species. Mesodinium major was recently described, and new studies indicate that blooms of M. major are just as common as blooms of M. rubrum. Despite this, the physiology of M. major has never been studied and compared to M. rubrum. In this study, growth, food uptake, chlorophyll a and photosynthesis were measured at six different irradiances, when fed the cryptophyte, Teleaulax amphioxeia. The results show that the light compensation point for growth of M. major was significantly higher than for M. rubrum. Inorganic carbon uptake via photosynthesis contributed by far most of total carbon uptake at most irradiances, similar to M. rubrum. Mesodinium major cells contain ~four times as many chloroplast as M. rubrum leading to up to ~four times higher rates of photosynthesis. The responses of M. major to prey starvation and refeeding were also studied. Mesodinium major was well adapted to prey starvation, and 51 d without prey did not lead to mortality. Mesodinium major quickly recovered from prey starvation when refed, due to high ingestion rates of > 150 prey/predator/d.
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Affiliation(s)
- Kirstine Drumm
- Department of Biology, University of Copenhagen, Helsingør, 3000, Denmark
- Department of Bioscience, University of Aarhus, Roskilde, 4000, Denmark
| | - Andreas Norlin
- Department of Biology, University of Copenhagen, Helsingør, 3000, Denmark
- School of Earth and Environmental Sciences, Cardiff University, Cardiff, CF10 3AT, United Kingdom
| | - Miran Kim
- Department of Biology, University of Copenhagen, Helsingør, 3000, Denmark
- Honam National Institute of Biological Resources, Gohadoan-gil, Mokpo-si, Jeollanam-do, 58762, Korea
| | - Andreas Altenburger
- The Arctic University Museum of Norway, UiT - the Arctic University of Norway, Tromsø, 9037, Norway
| | - Per Juel Hansen
- Department of Biology, University of Copenhagen, Helsingør, 3000, Denmark
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Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum. THE ISME JOURNAL 2021; 15:1056-1072. [PMID: 33230263 PMCID: PMC8115319 DOI: 10.1038/s41396-020-00830-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/14/2020] [Revised: 10/28/2020] [Accepted: 11/02/2020] [Indexed: 01/29/2023]
Abstract
The marine ciliate Mesodinium rubrum is famous for its ability to acquire and exploit chloroplasts and other cell organelles from some cryptophyte algal species. We sequenced genomes and transcriptomes of free-swimming Teleaulax amphioxeia, as well as well-fed and starved M. rubrum in order to understand cellular processes upon sequestration under different prey and light conditions. From its prey, the ciliate acquires the ability to photosynthesize as well as the potential to metabolize several essential compounds including lysine, glycan, and vitamins that elucidate its specific prey dependency. M. rubrum does not express photosynthesis-related genes itself, but elicits considerable transcriptional control of the acquired cryptophyte organelles. This control is limited as light-dependent transcriptional changes found in free-swimming T. amphioxeia got lost after sequestration. We found strong transcriptional rewiring of the cryptophyte nucleus upon sequestration, where 35% of the T. amphioxeia genes were significantly differentially expressed within well-fed M. rubrum. Qualitatively, 68% of all genes expressed within well-fed M. rubrum originated from T. amphioxeia. Quantitatively, these genes contributed up to 48% to the global transcriptome in well-fed M. rubrum and down to 11% in starved M. rubrum. This tertiary endosymbiosis system functions for several weeks, when deprived of prey. After this point in time, the ciliate dies if not supplied with fresh prey cells. M. rubrum represents one evolutionary way of acquiring photosystems from its algal prey, and might represent a step on the evolutionary way towards a permanent tertiary endosymbiosis.
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Morrissey KL, Çavaş L, Willems A, De Clerck O. Disentangling the Influence of Environment, Host Specificity and Thallus Differentiation on Bacterial Communities in Siphonous Green Seaweeds. Front Microbiol 2019; 10:717. [PMID: 31024496 PMCID: PMC6460459 DOI: 10.3389/fmicb.2019.00717] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2018] [Accepted: 03/21/2019] [Indexed: 12/14/2022] Open
Abstract
Siphonous green seaweeds, such as Caulerpa, are among the most morphologically complex algae with differentiated algal structures (morphological niches). Caulerpa is also host to a rich diversity of bacterial endo- and epibionts. The degree to which these bacterial communities are species-, or even niche-specific remains largely unknown. To address this, we investigated the diversity of bacteria associated to different morphological niches of both native and invasive species of Caulerpa from different geographic locations along the Turkish coastline of the Aegean sea. Associated bacteria were identified using the 16S rDNA marker gene for three morphological niches, such as the endobiome, epibiome, and rhizobiome. Bacterial community structure was explored and deterministic factors behind bacterial variation were investigated. Of the total variation, only 21.5% could be explained. Pronounced differences in bacterial community composition were observed and variation was partly explained by a combination of host species, biogeography and nutrient levels. The majority of the explained bacterial variation within the algal holobiont was attributed to the micro-environments established by distinct morphological niches. This study further supports the hypothesis that the bacterial assembly is largely stochastic in nature and bacterial community structure is most likely linked to functional genes rather than taxonomy.
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Affiliation(s)
| | - Levent Çavaş
- Department of Chemistry, Biochemistry Division, Faculty of Science, Dokuz Eylül University, İzmir, Turkey
| | - Anne Willems
- Laboratory of Microbiology, Department of Biochemistry and Microbiology, Ghent University, Ghent, Belgium
| | - Olivier De Clerck
- Department of Biology, Phycology Research Group, Ghent University, Ghent, Belgium
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Herfort L, Maxey K, Voorhees I, Simon HM, Grobler K, Peterson TD, Zuber P. Use of Highly Specific Molecular Markers Reveals Positive Correlation between Abundances of
Mesodinium
cf.
major
and Its Preferred Prey,
Teleaulax amphioxeia,
During Red Water Blooms in the Columbia River Estuary. J Eukaryot Microbiol 2017; 64:740-755. [DOI: 10.1111/jeu.12407] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Revised: 02/22/2017] [Accepted: 02/23/2017] [Indexed: 11/29/2022]
Affiliation(s)
- Lydie Herfort
- NSF Science & Technology Center for Coastal Margin Observation & Prediction (CMOP) and Institute of Environmental Health Oregon Health & Science University 3181 S.W. Sam Jackson Park Road Portland Oregon 97239 USA
| | - Katie Maxey
- NSF Science & Technology Center for Coastal Margin Observation & Prediction (CMOP) and Institute of Environmental Health Oregon Health & Science University 3181 S.W. Sam Jackson Park Road Portland Oregon 97239 USA
| | - Ian Voorhees
- NSF Science & Technology Center for Coastal Margin Observation & Prediction (CMOP) and Institute of Environmental Health Oregon Health & Science University 3181 S.W. Sam Jackson Park Road Portland Oregon 97239 USA
| | - Holly M. Simon
- NSF Science & Technology Center for Coastal Margin Observation & Prediction (CMOP) and Institute of Environmental Health Oregon Health & Science University 3181 S.W. Sam Jackson Park Road Portland Oregon 97239 USA
| | - Kolette Grobler
- Ministry of Fisheries and Marine Resources (MFMR) Lüderitz PO Box 394 Shark Island Namibia
| | - Tawnya D. Peterson
- NSF Science & Technology Center for Coastal Margin Observation & Prediction (CMOP) and Institute of Environmental Health Oregon Health & Science University 3181 S.W. Sam Jackson Park Road Portland Oregon 97239 USA
| | - Peter Zuber
- NSF Science & Technology Center for Coastal Margin Observation & Prediction (CMOP) and Institute of Environmental Health Oregon Health & Science University 3181 S.W. Sam Jackson Park Road Portland Oregon 97239 USA
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Kim M, Drumm K, Daugbjerg N, Hansen PJ. Dynamics of Sequestered Cryptophyte Nuclei in Mesodinium rubrum during Starvation and Refeeding. Front Microbiol 2017; 8:423. [PMID: 28377747 PMCID: PMC5359308 DOI: 10.3389/fmicb.2017.00423] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2016] [Accepted: 02/28/2017] [Indexed: 11/24/2022] Open
Abstract
The marine mixotrophic ciliate Mesodinium rubrum is known to acquire chloroplasts, mitochondria, nucleomorphs, and nucleus from its cryptophyte prey, particularly from species in the genera, Geminigera and Teleaulax. The sequestered prey nucleus and chloroplasts are considered to support photosynthesis of M. rubrum. In addition, recent studies have shown enlargement of the retained prey nucleus in starved M. rubrum and have inferred that enlargement results from the fusion of ingested prey nuclei. Thus far, however, little is known about the mechanism underlying the enlargement of the prey nucleus in M. rubrum. Here, we conducted starvation and refeeding studies to monitor the fate of prey nuclei acquired by M. rubrum when feeding on Teleaulax amphioxeia and to explore the influence of the retained prey nucleus on photosynthesis of M. rubrum. Results indicate that enlargement of the prey nucleus does not result from fusion of nuclei. Furthermore, the enlarged prey nucleus does not appear to divide during cell division of M. rubrum. The presence of a prey nucleus significantly affected photosynthetic performance of M. rubrum, while the number of retained chloroplasts had little influence on rate of carbon fixation. We interpret results within the context of a model that considers the dynamics of ingested prey nuclei during division of M. rubrum.
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Affiliation(s)
- Miran Kim
- Marine Biological Section, Department of Biology, University of Copenhagen Helsingør, Denmark
| | - Kirstine Drumm
- Marine Biological Section, Department of Biology, University of Copenhagen Helsingør, Denmark
| | - Niels Daugbjerg
- Marine Biological Section, Department of Biology, University of Copenhagen Copenhagen, Denmark
| | - Per J Hansen
- Marine Biological Section, Department of Biology, University of Copenhagen Helsingør, Denmark
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