1
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Yuan C, Jin WT, Zhou ZH. Comparisons of bond valences and distances for CO- and N 2-bound clusters of FeMo-cofactors. NEW J CHEM 2022. [DOI: 10.1039/d2nj00754a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
By comparisons of N2 and isoelectronic substrate CO bound FeMo-cofactors (FeMo-cos) in nitrogenases, we have used a classical bond valence method to calculate the oxidation states of the iron and molybdenum atoms in FeMo-cos.
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Affiliation(s)
- Chang Yuan
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China
| | - Wan-Ting Jin
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China
| | - Zhao-Hui Zhou
- State Key Laboratory of Physical Chemistry of Solid Surfaces, Department of Chemistry, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, P. R. China
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2
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Gretarsdottir JM, Jonsdottir S, Lewis W, Hambley TW, Suman SG. Water-Soluble α-Amino Acid Complexes of Molybdenum as Potential Antidotes for Cyanide Poisoning: Synthesis and Catalytic Studies of Threonine, Methionine, Serine, and Leucine Complexes. Inorg Chem 2020; 59:18190-18204. [PMID: 33249838 DOI: 10.1021/acs.inorgchem.0c02672] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Abstract
Water-soluble complexes are desirable for the aqueous detoxification of cyanide. Molybdenum complexes with α-amino acid and disulfide ligands with the formula K[(L)Mo2O2(μ-S)2(S2)] (L = leu (1), met (2), thr (3), and ser (4)) were synthesized in a reaction of [(DMF)3MoO(μ-S)2(S2)] with deprotonated α-amino acids; leu, met, thr, and ser are the carboxylate anions of l-leucine, l-methionine, l-threonine, and l-serine, respectively. Potassium salts of α-amino acids (leu (1a), met (2a), thr (3a), and ser (4a)) were prepared as precursors for complexes 1-4, respectively, by employing a nonaqueous synthesis route. The ligand exchange reaction of [Mo2O2(μ-S)2(DMF)6](I)2 with deprotonated α-amino acids afforded bis-α-amino acid complexes, [(L)2Mo2O2(μ-S)2] (6-8). A tris-α-amino acid complex, [(leu)2Mo2O2(μ-S)2(μ-leu + H)] (5; leu + H is the carboxylate anion of l-leucine with the amine protonated), formed in the reaction with leucine. 5 crystallized from methanol with a third weakly bonded leucine as a bridging bidentate carboxylate. An adduct of 8 with SCN- coordinated, 9, crystallized and was structurally characterized. Complexes 1-4 are air stable and highly water-soluble chiral molecules. Cytotoxicity studies in the A549 cell line gave IC50 values that range from 80 to 400 μM. Cyclic voltammetry traces of 1-8 show solvent-dependent irreversible electrochemical behavior. Complexes 1-4 demonstrated the ability to catalyze the reaction of thiosulfate and cyanide in vitro to exhaustively transform cyanide to thiocyanate in less than 1 h.
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Affiliation(s)
| | | | - William Lewis
- School of Chemistry, The University of Sydney, Sydney, NSW 2006, Australia
| | - Trevor W Hambley
- School of Chemistry, The University of Sydney, Sydney, NSW 2006, Australia
| | - Sigridur G Suman
- Science Institute, University of Iceland, Dunhagi 3, 107 Reykjavik, Iceland
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3
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Assignment of protonated R-homocitrate in extracted FeMo-cofactor of nitrogenase via vibrational circular dichroism spectroscopies. Commun Chem 2020; 3:145. [PMID: 34337161 PMCID: PMC8323615 DOI: 10.1038/s42004-020-00392-z] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023] Open
Abstract
Protonation of FeMo-cofactor is important for the process of substrate hydrogenation. Its structure has been clarified as Δ-Mo*Fe7S9C(R-homocit*)(cys)(Hhis) for the efforts of nearly 30 years, while it remains controversial whether FeMo-cofactor is protonated or deprotonated with chelated ≡C-O(H) homocitrate. We have used protonated molybdenum(V) lactates 1 and its enantiomer as model compounds for R-homocitrate in FeMo-cofactor of nitrogenase. Vibrational circular dichroism (VCD) spectrum of 1 at 1051 cm-1 is attributed to ≡C-OH vibration, and molybdenum(VI) R-lactate at 1086 cm-1 is assigned as ≡C-O α-alkoxy vibration. These vibrations set up labels for the protonation state of coordinated α-hydroxycarboxylates. The characteristic VCD band of NMF-extracted FeMo-cofactor is assigned to ν(C-OH), which is based on the comparison of molybdenum(VI) R-homocitrate. Density Functional Theory calculations are in consistent with these assignments. To the best of our knowledge, this is the first time that protonated R-homocitrate in FeMo-cofactor is confirmed by VCD spectra.
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4
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Deng L, Dong X, An DL, Weng WZ, Zhou ZH. Gas Adsorption of Mixed-Valence Trinuclear Oxothiomolybdenum Glycolates. Inorg Chem 2020; 59:4874-4881. [DOI: 10.1021/acs.inorgchem.0c00118] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Affiliation(s)
- Lan Deng
- State Key Laboratory for Physical Chemistry of Solid Surfaces and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Xing Dong
- State Key Laboratory for Physical Chemistry of Solid Surfaces and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Dong-Li An
- State Key Laboratory for Physical Chemistry of Solid Surfaces and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Wei-Zheng Weng
- State Key Laboratory for Physical Chemistry of Solid Surfaces and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
| | - Zhao-Hui Zhou
- State Key Laboratory for Physical Chemistry of Solid Surfaces and College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China
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5
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Wang SY, Dai JW, Chen HB, Zhou ZH. 2,2′-Bipyridine or 1,10-phenanthroline chelated oxomolybdenum(V) complexes with glycolate, lactate and malate in acidic media. Inorganica Chim Acta 2019. [DOI: 10.1016/j.ica.2019.03.013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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6
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Jin WT, Wang H, Wang SY, Dapper CH, Li X, Newton WE, Zhou ZH, Cramer SP. Preliminary Assignment of Protonated and Deprotonated Homocitrates in Extracted FeMo-Cofactors by Comparisons with Molybdenum(IV) Lactates and Oxidovanadium Glycolates. Inorg Chem 2019; 58:2523-2532. [PMID: 30726074 DOI: 10.1021/acs.inorgchem.8b03108] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
A similar pair of protonated and deprotonated mononuclear oxidovanadium glycolates [VO(Hglyc)(phen)(H2O)]Cl·2H2O (1) and [VO(glyc)(bpy)(H2O)] (2) and a mixed-(de)protonated oxidovanadium triglycolate (NH4)2[VO(Hglyc)2(glyc)]·H2O (3) were isolated and examined. The ≡C-O(H) (≡C-OH or ≡C-O) groups coordinated to vanadium were spectroscopically and structurally identified. The glycolate in 1 features a bidentate chelation through protonated α-hydroxy and α-carboxy groups, whereas the glycolate in 2 coordinates through deprotonated α-alkoxy and α-carboxy groups. The glycolates in 3 coordinate to vanadium through α-alkoxy or α-hydroxy and α-carboxy groups and thus have both protonated ≡C-OH and deprotonated ≡C-O bonds simultaneously. Structural investigations revealed that the longer protonated V-Oα-hydroxy bonds [2.234(2) Å and 2.244(2) Å] in 1 and 3 are close to those of FeV-cofactor (FeV-co) 2.17 Å1 (FeMo-co 2.17 Å2), while deprotonated V-Oα-alkoxy bonds [2, 1.930(2); 3, 1.927(2) Å] were obviously shorter. This shows a similar elongated trend as the Mo-O distances in the previously reported deprotonated vs protonated molybdenum lactates (Wang, S. Y. et al. Dalton Trans. 2018, 47, 7412-7421) and these vanadium and molybdenum complexes have the same local V/Mo-homocitrate structures as those of FeV/Mo-cos of nitrogenases. The IR spectra of these oxidovanadium and the previously synthesized molybdenum complexes including different substituted ≡C-O(H) model compounds show red-shifts for ≡C-OH vs ≡C-O alternation, which further assign the two IR bands of extracted FeMo-co at 1084 and 1031 cm-1 to ≡C-O and ≡C-OH vibrations, respectively. Although the structural data or IR spectra for some of the previously synthesized Mo/V complexes and extracted FeMo-co were measured earlier, this is the first time that the ≡C-O(H) coordinated peaks are assigned. The overall structural and IR results well suggest the coexistence of homocitrates coordinated with α-alkoxy (deprotonated) and α-hydroxy (protonated) groups in the extracted FeMo-co.
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Affiliation(s)
- Wan-Ting Jin
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering , Xiamen University , Xiamen 361005 , China
| | - Hongxin Wang
- Department of Chemistry , University of California , Davis , California 95616 , United States.,Physical Biosciences Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
| | - Si-Yuan Wang
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering , Xiamen University , Xiamen 361005 , China
| | - Christie H Dapper
- Department of Biochemistry , Virginia Polytechnic Institute and State University , Blacksburg , Virginia 24061 , United States
| | - Xing Li
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering , Xiamen University , Xiamen 361005 , China
| | - William E Newton
- Department of Biochemistry , Virginia Polytechnic Institute and State University , Blacksburg , Virginia 24061 , United States
| | - Zhao-Hui Zhou
- State Key Laboratory of Physical Chemistry of Solid Surfaces, College of Chemistry and Chemical Engineering , Xiamen University , Xiamen 361005 , China
| | - Stephen P Cramer
- Department of Chemistry , University of California , Davis , California 95616 , United States.,Physical Biosciences Division , Lawrence Berkeley National Laboratory , Berkeley , California 94720 , United States
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7
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Wang SY, Zhou ZH. Molybdenum imidazole citrate and bipyridine homocitrate in different oxidation states – balance between coordinated α-hydroxy and α-alkoxy groups. RSC Adv 2019; 9:519-528. [PMID: 35521591 PMCID: PMC9059298 DOI: 10.1039/c8ra09134j] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2018] [Accepted: 12/11/2018] [Indexed: 01/28/2023] Open
Abstract
Oxo and thiomolybdenum(iv/vi) imidazole hydrocitrates K2{MoIV3O4(im)3[MoVIO3(Hcit)]2}·3im·4H2O (1), (Him)2{MoIV3SO3(im)3[MoVIO3(Hcit)]2}·im·6H2O (2), molybdenum(v) bipyridine homocitrate trans-[(MoVO)2O(H2homocit)2(bpy)2]·4H2O (3) and molybdenum(vi) citrate (Et4N)[MoVIO2Cl(H2cit)]·H2O (4) (H4cit = citric acid, H4homocit = homocitric acid, im = imidazole and bpy = 2,2′-bipyridine) with different oxidation states were prepared. 1 and 2 are the coupling products of [MoVIO3(Hcit)]3− anions and incomplete cubane units [MoIV3O4]4+ ([MoIV3SO3]4+) with monodentate imidazoles, respectively, where tridentate citrates coordinate with α-hydroxy, α-carboxy and β-carboxy groups, forming pentanuclear skeleton structures. The molybdenum atoms in 1 and 2 show unusual +4 and +6 valences based on charge balances, theoretical bond valence calculations and Mo XPS spectrum. The coordinated citrates in 1 and 2 are protonated with α-hydroxy groups, while 3 and 4 with higher oxidation states of +5 and +6 are deprotonated with α-alkoxy group even under strong acidic condition, respectively. This shows the relationship between the oxidation state and protonation of the α-alkoxy group in citrate or homocitrate, which is related to the protonation state of homocitrate in FeMo-cofactor of nitrogenase. The homocitrate in 3 chelates to molybdenum(v) with bidentate α-alkoxy and monodentate α-carboxy groups. Molybdenum(vi) citrate 4 is only protonated with coordinated and uncoordinated β-carboxy groups. The solution behaviours of 1 and 2 are discussed based on 1H and 13C NMR spectroscopies and cyclic voltammograms, showing no decomposition of the species. Oxo and thiomolybdenum(iv/vi) citrates, molybdenum(v) homocitrate and molybdenum(vi) citrate were obtained, showing the influence of coordinated α-hydroxy and α-alkoxy groups with different oxidation states.![]()
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Affiliation(s)
- Si-Yuan Wang
- State Key Laboratory for Physical Chemistry of Solid Surfaces
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Zhao-Hui Zhou
- State Key Laboratory for Physical Chemistry of Solid Surfaces
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
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8
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Canaj AB, Kakaroni FΕ, Collet A, Milios CJ. α-Amino acids: Natural and artificial building blocks for discrete polymetallic clusters. Polyhedron 2018. [DOI: 10.1016/j.poly.2018.05.005] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/12/2023]
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9
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Wang SY, Jin WT, Chen HB, Zhou ZH. Comparison of hydroxycarboxylato imidazole molybdenum(iv) complexes and nitrogenase protein structures: indirect evidence for the protonation of homocitrato FeMo-cofactors. Dalton Trans 2018; 47:7412-7421. [DOI: 10.1039/c8dt00278a] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Glycolato and lactato imidazole molybdenum(iv) complexes are used for structural comparison with FeMo-cofactors of MoFe-protein structures.
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Affiliation(s)
- Si-Yuan Wang
- State Key Laboratory for Physical Chemistry of Solid Surfaces
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Wan-Ting Jin
- State Key Laboratory for Physical Chemistry of Solid Surfaces
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Hong-Bin Chen
- State Key Laboratory for Physical Chemistry of Solid Surfaces
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
| | - Zhao-Hui Zhou
- State Key Laboratory for Physical Chemistry of Solid Surfaces
- College of Chemistry and Chemical Engineering
- Xiamen University
- Xiamen
- China
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10
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Abramov PA, Shmakova AA, Sokolov MN. Crystal structure of Na3[TaO8]·14H2O. J STRUCT CHEM+ 2017. [DOI: 10.1134/s0022476617040266] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
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11
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Rinn N, Berndt JP, Kreher A, Hrdina R, Reinmuth M, Schreiner PR, Dehnen S. Peptide-Functionalized Organotin Sulfide Clusters. Organometallics 2016. [DOI: 10.1021/acs.organomet.6b00561] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Affiliation(s)
- Niklas Rinn
- Department
of Chemistry and Wissenschaftliches Zentrum für Materialwissenschaften
(WZMW), Philipps-Universität Marburg, 35037 Marburg, Germany
| | - Jan-Philipp Berndt
- Institute
of Organic Chemistry, Justus-Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Annikka Kreher
- Department
of Chemistry and Wissenschaftliches Zentrum für Materialwissenschaften
(WZMW), Philipps-Universität Marburg, 35037 Marburg, Germany
| | - Radim Hrdina
- Institute
of Organic Chemistry, Justus-Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Matthias Reinmuth
- Department
of Chemistry and Wissenschaftliches Zentrum für Materialwissenschaften
(WZMW), Philipps-Universität Marburg, 35037 Marburg, Germany
| | - Peter R. Schreiner
- Institute
of Organic Chemistry, Justus-Liebig University, Heinrich-Buff-Ring 17, 35392 Giessen, Germany
| | - Stefanie Dehnen
- Department
of Chemistry and Wissenschaftliches Zentrum für Materialwissenschaften
(WZMW), Philipps-Universität Marburg, 35037 Marburg, Germany
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12
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Gushchin AL, Hernandez-Molina R, Anyushin AV, Gallyamov MR, Gonzalez-Platas J, Moroz NK, Sokolov MN. Synthesis, structure and NMR studies of trinuclear Mo 3S 4 clusters coordinated with dithiophosphate and chiral carboxylate ligands. NEW J CHEM 2016. [DOI: 10.1039/c6nj01303a] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
Introducing chirality into the Mo3S4 cluster has been achieved through coordination of (S)-mandelate and (S)-phenyllactate ligands affording new complexes as a pair of diastereoisomers, (PS) and (MS), represented in the scheme.
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Affiliation(s)
- Artem L. Gushchin
- Nikolaev Institute of Inorganic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
| | - Rita Hernandez-Molina
- Departamento de Química Inorgánica
- Facultad de Química
- Universidad de La Laguna
- Tenerife
- Spain
| | - Alexander V. Anyushin
- Nikolaev Institute of Inorganic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- 630090 Novosibirsk
- Russia
| | - Marsel R. Gallyamov
- Nikolaev Institute of Inorganic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- 630090 Novosibirsk
- Russia
| | - Javier Gonzalez-Platas
- Departamento de Física
- Servicio Integrado de Difracción de Rayos X
- Universidad de La Laguna
- Tenerife
- Spain
| | - Nikolay K. Moroz
- Nikolaev Institute of Inorganic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- 630090 Novosibirsk
- Russia
| | - Maxim N. Sokolov
- Nikolaev Institute of Inorganic Chemistry
- Siberian Branch of the Russian Academy of Sciences
- 630090 Novosibirsk
- Russia
- Novosibirsk State University
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13
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Pedrajas E, Sorribes I, Junge K, Beller M, Llusar R. A Mild and Chemoselective Reduction of Nitro and Azo Compounds Catalyzed by a Well-Defined Mo3S4Cluster Bearing Diamine Ligands. ChemCatChem 2015. [DOI: 10.1002/cctc.201500311] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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