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Cheng X, Guo L, Wang H, Gu J, Yang Y, Kirillova MV, Kirillov AM. Coordination Polymers from Biphenyl-Dicarboxylate Linkers: Synthesis, Structural Diversity, Interpenetration, and Catalytic Properties. Inorg Chem 2022; 61:12577-12590. [PMID: 35920738 PMCID: PMC9775469 DOI: 10.1021/acs.inorgchem.2c01488] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
The present work explores two biphenyl-dicarboxylate linkers, 3,3'-dihydroxy-(1,1'-biphenyl)-4,4'-dicarboxylic (H4L1) and 4,4'-dihydroxy-(1,1'-biphenyl)-3,3'-dicarboxylic (H4L2) acids, in hydrothermal generation of nine new compounds formulated as [Co2(μ2-H2L1)2(phen)2(H2O)4] (1), [Mn2(μ4-H2L1)2(phen)2]n·4nH2O (2), [Zn(μ2-H2L1)(2,2'-bipy)(H2O)]n (3), [Cd(μ2-H2L1) (2,2'-bipy)(H2O)]n (4), [Mn2(μ2-H2L1)(μ4-H2L1)(μ2-4,4'-bipy)2]n·4nH2O (5), [Zn(μ2-H2L1)(μ2-4,4'-bipy)]n (6), [Zn(μ2-H2L2)(phen)]n (7), [Cd(μ3-H2L2)(phen)]n (8), and [Cu(μ2-H2L2) (μ2-4,4'-bipy)(H2O)]n (9). These coordination polymers (CPs) were generated by reacting a metal(II) chloride, a H4L1 or H4L2 linker, and a crystallization mediator such as 2,2'-bipy (2,2'-bipyridine), 4,4'-bipy (4,4'-bipyridine), or phen (1,10-phenanthroline). The structural types of 1-9 range from molecular dimers (1) to one-dimensional (3, 4, 7) and two-dimensional (8, 9) CPs as well as three-dimensional metal-organic frameworks (2, 5, 6). Their structural, topological, and interpenetration features were underlined, including an identification of unique two- and fivefold 3D + 3D interpenetrated nets in 5 and 6. Phase purity, thermal and luminescence behavior, as well as catalytic activity of the synthesized products were investigated. Particularly, a Zn(II)-based CP 3 acts as an effective and recyclable heterogeneous catalyst for Henry reaction between a model substrate (4-nitrobenzaldehyde) and nitroethane to give β-nitro alcohol products. For this reaction, various parameters were optimized, followed by the investigation of the substrate scope. By reporting nine new compounds and their structural traits and functional properties, the present work further outspreads a family of CPs constructed from the biphenyl-dicarboxylate H4L1 and H4L2 linkers.
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Affiliation(s)
- Xiaoyan Cheng
- State
Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous
Metal Chemistry and Resources Utilization of Gansu Province, College
of Chemistry and Chemical Engineering, Lanzhou
University, Lanzhou 730000, People’s Republic
of China
| | - Lirong Guo
- State
Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous
Metal Chemistry and Resources Utilization of Gansu Province, College
of Chemistry and Chemical Engineering, Lanzhou
University, Lanzhou 730000, People’s Republic
of China,
| | - Hongyu Wang
- State
Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous
Metal Chemistry and Resources Utilization of Gansu Province, College
of Chemistry and Chemical Engineering, Lanzhou
University, Lanzhou 730000, People’s Republic
of China
| | - Jinzhong Gu
- State
Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous
Metal Chemistry and Resources Utilization of Gansu Province, College
of Chemistry and Chemical Engineering, Lanzhou
University, Lanzhou 730000, People’s Republic
of China,. Phone: +86-931-8915196
| | - Ying Yang
- State
Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous
Metal Chemistry and Resources Utilization of Gansu Province, College
of Chemistry and Chemical Engineering, Lanzhou
University, Lanzhou 730000, People’s Republic
of China
| | - Marina V. Kirillova
- Centro
de Química Estrutural, Institute of Molecular Sciences, Departamento
de Engenharia Química, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, Lisbon 1049-001, Portugal
| | - Alexander M. Kirillov
- Centro
de Química Estrutural, Institute of Molecular Sciences, Departamento
de Engenharia Química, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, Lisbon 1049-001, Portugal,. Phone: +351-218419396
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Soldin Ž, Kukovec BM, Debač T, Đaković M, Popović Z. Anion-assisted supramolecular assemblies of zinc(II) complexes with isonicotinamide. Heliyon 2022; 8:e09943. [PMID: 35880001 PMCID: PMC9307440 DOI: 10.1016/j.heliyon.2022.e09943] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Revised: 05/06/2022] [Accepted: 07/08/2022] [Indexed: 11/18/2022] Open
Abstract
Five zinc(II) coordination compounds, [ZnCl2(isn)2] (1), [ZnBr2(isn)2] (2), [Zn(NO3)2(H2O)(isn)2] (3), [Zn(CH3COO)2(isn)]2 (4) and [Zn(isn)4(H2O)2](ClO4)2 (5) (isn = isonicotinamide), were prepared by the reactions of the isonicotinamide (pyridine-4-carboxamide, isn) and corresponding zinc(II) salts. Their crystal structures were determined by the single-crystal X-ray diffraction method. The coordination environment of zinc(II) is tetrahedral in the compounds containing small halide anions (chloride, bromide), 1 and 2. An expansion of the zinc(II) coordination environment to the octahedral is observed in the presence of the monodentate and bridging nitrate ions in 3. The coordination environments of both zinc(II) ions in dimeric acetate complex 4 is also enlarged in the comparison with 1 and 2, one zinc(II) ion being octahedrally coordinated and the other being pentacoordinated. The zinc(II) ion in 5 also reaches higher coordination environment (octahedral), which is enabled by binding of additional water molecules, since the perchlorate ion is uncoordinated. The supramolecular amide-amide homosynthon R 2 2 ( 8 ) is preserved in the presence of halide, nitrate and acetate ions (1-4), but it is completely disrupted in the crystal packing of 5 due to the presence of the bulky perchlorate anion. Spectroscopic analysis of compounds 1-5 was performed by IR spectroscopy in the solid state and by 13C NMR spectroscopy in the DMSO solutions. The NMR data support a complete decomposition of 3 in the DMSO solution, but 1, 2, 4 and 5 remain unchanged in the solution. Thermal properties of the coordination compounds were also investigated by TGA and DSC methods.
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Affiliation(s)
- Željka Soldin
- Division of General and Inorganic Chemistry, Department of Chemistry, Faculty of Science, University of Zagreb, Horvatovac 102a, HR-10000 Zagreb, Croatia
- Corresponding author.
| | - Boris-Marko Kukovec
- Department of Physical Chemistry, Faculty of Chemistry and Technology, University of Split, Ruđera Boškovića 35, HR-21000 Split, Croatia
- Corresponding author.
| | - Tamara Debač
- Elementary School Ferdinandovac, Dravska 66, HR-48356 Ferdinandovac, Croatia
- Elementary School Đurđevac, Ulica Đure Basaričeka 5D, HR-48350 Đurđevac, Croatia
| | - Marijana Đaković
- Division of General and Inorganic Chemistry, Department of Chemistry, Faculty of Science, University of Zagreb, Horvatovac 102a, HR-10000 Zagreb, Croatia
| | - Zora Popović
- Division of General and Inorganic Chemistry, Department of Chemistry, Faculty of Science, University of Zagreb, Horvatovac 102a, HR-10000 Zagreb, Croatia
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3
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Viola, Muhammad N, Khan IN, Ali Z, Ibrahim M, Shujah S, Ali S, Ikram M, Rehman S, Khan GS, Wadood A, Noor A, Schulzke C. Synthesis, characterization, antioxidant, antileishmanial, anticancer, DNA and theoretical SARS-CoV-2 interaction studies of copper(II) carboxylate complexes. J Mol Struct 2022; 1253:132308. [PMID: 34980930 PMCID: PMC8716173 DOI: 10.1016/j.molstruc.2021.132308] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2021] [Revised: 12/10/2021] [Accepted: 12/28/2021] [Indexed: 12/16/2022]
Abstract
Copper(II) carboxylate complexes [Cu2(OOCR)4L2] (1) and [Cu2(OOCR`)4OCO(R`)CuL2]n (2), where L = 2-methyl pyridine, R = 2-chlorophenyl acetate and R` = 2-fluorophenyl acetate were synthesized and characterized by FT-IR spectroscopy and single crystal X-ray analysis. Complex 1 exhibits the typical paddlewheel array of a dinuclear copper(II) complex with carboxylate ligands. In complex 2, this scaffold is further extended into a polymeric arrangement based on alternate paddlewheel and square planar moieties with distinct coordination spheres. The complexes showed better 2,2-diphenyl-1-picrylhydrazyl (DPPH) and hydroxyl radical scavenging activities and have been found to be more potent antileishmanial agents than their corresponding free ligand acid species. UV-Vis absorption titrations revealed good DNA binding abilities {Kb = 9.8 × 104 M-1 (1) and 9.9 × 104 M-1 (2)} implying partial intercalation of the complexes into DNA base pairs along with groove binding. The complexes displayed in vitro cytotoxic activity against malignant glioma U-87 (MG U87) cell lines. Computational docking studies further support complex-DNA binding by intercalation. Molecular docking investigations revealed probable interactions of the complexes with spike protein, the nucleocapsid protein of SARS-CoV-2 and with the angiotensin converting enzyme of human cells.
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Affiliation(s)
- Viola
- Department of Chemistry, Abdul Wali Khan University, Mardan, Pakistan
| | - Niaz Muhammad
- Department of Chemistry, Abdul Wali Khan University, Mardan, Pakistan,Corresponding author
| | - Ishaq N. Khan
- Institute of Basic Medical Sciences Khyber Medical University, Peshawar 25100, Pakistan
| | - Zafar Ali
- Department of Chemistry, Abdul Wali Khan University, Mardan, Pakistan
| | - Mohammad Ibrahim
- Department of Chemistry, Abdul Wali Khan University, Mardan, Pakistan
| | - Shaukat Shujah
- Department of Chemistry, Kohat University of Science and Technology, Kohat, Pakistan
| | - Saqib Ali
- Department of Chemistry, Quaid-I-Azam University Islamabad, 45320, Pakistan
| | - Muhammad Ikram
- Department of Chemistry, Abdul Wali Khan University, Mardan, Pakistan
| | - Sadia Rehman
- Department of Chemistry, Abdul Wali Khan University, Mardan, Pakistan
| | - Gul Shahzada Khan
- Department of Chemistry, College of Science, University of Bahrain, Sakhir 32038, Bahrain
| | - Abdul Wadood
- Department of Biochemistry, Abdul Wali Khan University, Mardan Pakistan
| | - Awal Noor
- Department of Basic Sciences, Preparatory Year Deanship, King Faisal University, Al-Hassa 31982, Saudi Arabia
| | - Carola Schulzke
- Institut für Biochemie, Universität Greifswald, Felix-Hausdorff-Straße 4, Greifswald 17489, Germany
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Chisca D, Croitor L, Coropceanu EB, Fonari MS. Four Cu(II) coordination polymers with biocompatible isonicotinamide and picolinate ligands in interplay with anionic and neutral linkers. INORG CHEM COMMUN 2021. [DOI: 10.1016/j.inoche.2021.108864] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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Luo S, Xiao W, Sun X, Zheng P. Regulation mechanism of the solvent coligands on the magnetic properties of azido-Cu(II) complexes by mixed carboxylate/alkanols ligands: A theoretical exploration. Polyhedron 2021. [DOI: 10.1016/j.poly.2021.115312] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Sánchez-Férez F, Calvet T, Font-Bardia M, Pons J. Cu(II) coordination polymers with 4,4′-bipyridine. Synthesis and crystal structures. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2021.130219] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
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Gu JZ, Wan SM, Dou W, Kirillova MV, Kirillov AM. Coordination polymers from an unexplored biphenyl-tricarboxylate linker: hydrothermal synthesis, structural traits and catalytic cyanosilylation. Inorg Chem Front 2021. [DOI: 10.1039/d0qi01230k] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
3,2′,4′-Biphenyl-tricarboxylic acid (H3bta) was used as a versatile linker for preparing a new series of metal(ii) (Zn, Ni, and Cd) coordination polymers and complexes with notable structural, luminescence and catalytic features.
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Affiliation(s)
- Jin-Zhong Gu
- State Key Laboratory of Applied Organic Chemistry
- Key Laboratory of Nonferrous Metal Chemistry and Resources Utilization of Gansu Province
- College of Chemistry and Chemical Engineering
- Lanzhou University
- Lanzhou 730000
| | - Shi-Mao Wan
- State Key Laboratory of Applied Organic Chemistry
- Key Laboratory of Nonferrous Metal Chemistry and Resources Utilization of Gansu Province
- College of Chemistry and Chemical Engineering
- Lanzhou University
- Lanzhou 730000
| | - Wei Dou
- State Key Laboratory of Applied Organic Chemistry
- Key Laboratory of Nonferrous Metal Chemistry and Resources Utilization of Gansu Province
- College of Chemistry and Chemical Engineering
- Lanzhou University
- Lanzhou 730000
| | - Marina V. Kirillova
- Centro de Química Estrutural and Departamento de Engenharia Química
- Instituto Superior Técnico
- Universidade de Lisboa
- 1049-001 Lisbon
- Portugal
| | - Alexander M. Kirillov
- Centro de Química Estrutural and Departamento de Engenharia Química
- Instituto Superior Técnico
- Universidade de Lisboa
- 1049-001 Lisbon
- Portugal
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Jozefíková F, Perontsis S, Šimunková M, Barbieriková Z, Švorc L, Valko M, Psomas G, Moncol’ J. Novel copper(ii) complexes with fenamates and isonicotinamide: structure and properties, and interactions with DNA and serum albumin. NEW J CHEM 2020. [DOI: 10.1039/d0nj02007a] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]
Abstract
Reactions of non-steroidal anti-inflammatory drugs tolfenamic, meclofenamic, mefenamic, clonixic and niflumic acids with isonicotinamide and copper(ii) acetate resulted in the formation of five novel mixed-ligand Cu(ii) coordination compounds.
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Affiliation(s)
- Flóra Jozefíková
- Department of Inorganic Chemistry
- Faculty of Chemical and Food Technology
- Slovak University of Technology
- Bratislava
- Slovakia
| | - Spyros Perontsis
- Department of General and Inorganic Chemistry
- Faculty of Chemistry
- Aristotle University of Thessaloniki
- GR-54124 Thessaloniki
- Greece
| | - Miriama Šimunková
- Department of Physical Chemistry
- Faculty of Chemical and Food Technology
- Slovak University of Technology
- Bratislava
- Slovakia
| | - Zuzana Barbieriková
- Department of Physical Chemistry
- Faculty of Chemical and Food Technology
- Slovak University of Technology
- Bratislava
- Slovakia
| | - L’ubomír Švorc
- Department of Analytical Chemistry
- Faculty of Chemical and Food Technology
- Slovak University of Technology
- Bratislava
- Slovakia
| | - Marian Valko
- Department of Physical Chemistry
- Faculty of Chemical and Food Technology
- Slovak University of Technology
- Bratislava
- Slovakia
| | - George Psomas
- Department of General and Inorganic Chemistry
- Faculty of Chemistry
- Aristotle University of Thessaloniki
- GR-54124 Thessaloniki
- Greece
| | - Ján Moncol’
- Department of Inorganic Chemistry
- Faculty of Chemical and Food Technology
- Slovak University of Technology
- Bratislava
- Slovakia
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9
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Gu JZ, Wan SM, Kirillova MV, Kirillov AM. H-Bonded and metal(ii)-organic architectures assembled from an unexplored aromatic tricarboxylic acid: structural variety and functional properties. Dalton Trans 2020; 49:7197-7209. [PMID: 32418999 DOI: 10.1039/d0dt01261k] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
This study reports the application of an aromatic tricarboxylic acid, 2,5-di(4-carboxylphenyl)nicotinic acid (H3dcna) as a versatile and unexplored organic building block for assembling a new series of metal(ii) (M = Co, Ni, Zn, Fe, and Mn) complexes and coordination polymers, namely [M(Hdcna)(phen)2(H2O)]·H2O (M = Co (1), Ni (2)), [Zn(μ-Hdcna)(phen)]n (3), [Co(μ-Hdcna)(bipy)(H2O)2]n·nH2O (4), [Zn2(μ-Hdcna)2(bipy)2(H2O)4]·6H2O (5), [Zn(μ3-Hdcna)(H2biim)]n (6), [Ni2(Hdcna)2(μ-bpb)(bpb)2(H2O)4] (7), [Fe(μ4-Hdcna)(μ-H2O)]n·nH2O (8), and [Mn3(μ5-dcna)2(bipy)2(H2O)2]n·2nH2O (9). Such a diversity of products was hydrothermally prepared from the corresponding metal(ii) salts, H3dcna as a principal multifunctional ligand, and N-donor mediators of crystallization (1,10-phenanthroline, phen; 2,2'-bipyridine, bipy; 2,2'-biimidazole, H2biim; or 1,4-bis(pyrid-4-yl)benzene, bpb). The obtained products 1-9 were fully characterized by standard methods (elemental analysis, FTIR, TGA, PXRD) and the structures were established by single-crystal X-ray diffraction. These vary from the discrete monomers (1, 2) and dimers (5, 7) to the 1D (3, 4, 6) and 2D (8, 9) coordination polymers (CPs). Structural and topological characteristics of hydrogen-bonded or metal-organic architectures in 1-9 were highlighted, revealing that their structural multiplicity depends on the type of metal(ii) source and crystallization mediator. Thermal stability as well as luminescent, magnetic, or catalytic properties were explored for selected compounds. In particular, the zinc(ii) derivatives 3, 5, and 6 were applied as efficient heterogeneous catalysts for the cyanosilylation of aldehydes with trimethylsilyl cyanide at room temperature. The catalytic reactions were optimized by tuning the different reaction parameters (solvent composition, time, catalyst loading) and the substrate scope was also explored. Compound 5 revealed superior catalytic activity leading to up to 75% product yields, while maintaining its original performance upon recycling for at least four reaction cycles. Finally, the obtained herein products represent the unique examples of coordination compounds derived from H3dcna, thus opening up the use of this multifunctional tricarboxylic acid for generating complexes and coordination polymers with interesting structures and functional properties.
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Affiliation(s)
- Jin-Zhong Gu
- State Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous Metal Chemistry and Resources Utilization of Gansu Province, College of Chemistry and Chemical Engineering, Lanzhou University, Lanzhou 730000, People's Republic of China.
| | - Shi-Mao Wan
- State Key Laboratory of Applied Organic Chemistry, Key Laboratory of Nonferrous Metal Chemistry and Resources Utilization of Gansu Province, College of Chemistry and Chemical Engineering, Lanzhou University, Lanzhou 730000, People's Republic of China.
| | - Marina V Kirillova
- Centro de Química Estrutural and Departamento de Engenharia Química, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisbon, Portugal.
| | - Alexander M Kirillov
- Centro de Química Estrutural and Departamento de Engenharia Química, Instituto Superior Técnico, Universidade de Lisboa, Av. Rovisco Pais, 1049-001 Lisbon, Portugal. and Research Institute of Chemistry, Peoples' Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya st., Moscow, 117198, Russian Federation
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Isonicotinamide-Based Compounds: From Cocrystal to Polymer. Molecules 2019; 24:molecules24224169. [PMID: 31744252 PMCID: PMC6891728 DOI: 10.3390/molecules24224169] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2019] [Revised: 11/14/2019] [Accepted: 11/15/2019] [Indexed: 11/16/2022] Open
Abstract
The reaction between [Cu(μ-OAc)(μ-Pip)(MeOH)]2 (1) (OAc = acetate; Pip = 1,3-benzodioxole-5-carboxylate) and isonicotinamide (Isn) in MeOH as solvent yielded two mixture pairs of three compounds: {(HPip)2(Isn) (2), [Cu(Pip)2(Isn)2] (3)} and {(3), {[Cu3(Pip)2(OAc)2(μ-Isn)2(Isn)2(μ-OCH3)2(MeOH)2]·2MeOH}n (4)}. Modifying the reaction conditions (t, T, molar ratio), 2 and 3 have been successfully isolated, whereas 3 and 4 had to be mechanically separated. The recrystallization of 3 in pentanol yielded single crystals of compound [Cu(Pip)2(Isn)2]·C5H11OH (3a). The X-ray crystal structure of 2, 3a, and 4 has been elucidated showing a cocrystal, a monomer, and an unusual coordination polymer, respectively. The Pip ligand exhibited a chelate (3a) or a monodentate (4) coordination mode, but the Isonicotinamide (Isn) ligand is the one that promoted the arrangement of different structures and also mainly directs the formation of the 2D and 3D supramolecular assemblies. All the structures have been analyzed by Hirshfeld surface. In addition, the energy frameworks and lattice energy values of 2 and 3a have been calculated.
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