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Bellich B, Cacioppo M, De Zorzi R, Rizzo R, Brady JW, Cescutti P. Interactions of biofilm polysaccharides produced by human infective bacteria with molecules of the quorum sensing system. A microscopy and NMR study. Int J Biol Macromol 2024; 281:136222. [PMID: 39362422 DOI: 10.1016/j.ijbiomac.2024.136222] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2024] [Revised: 09/20/2024] [Accepted: 09/30/2024] [Indexed: 10/05/2024]
Abstract
Biofilms are the most common lifestyle adopted by bacterial communities where cells live embedded in a self-produced hydrated matrix. Although polysaccharides are considered essential for matrix architecture, their possible functional roles are still rather unexplored. The primary structure of polysaccharides produced by Klebsiella pneumoniae and species of the Burkholderia cepacia Complex revealed a composition rich in rhamnose. The methyl group on carbon 6 of rhamnose units lowers the polymer hydrophilicity and can form low polarity regions on the polysaccharide chains. These regions promote chain-chain interactions that contribute to the biofilm matrix stability, but may also act as binding sites for low-polarity molecules, aiding their mobility through the hydrated matrix. In particular, quorum sensing system components crucial for the biofilm life cycle often display poor solubility in water. Therefore, cis-11-methyl-2-dodecenoic acid and L-homoserine-lactones were investigated by NMR spectroscopy for their possible interaction with polysaccharides. In addition, the macromolecular morphology of the polysaccharides was assessed using atomic force and electron microscopies to define the role of Rha residues on the three-dimensional conformation of the polymer. NMR data revealed that quorum sensing components interact with Rhamnose-rich polysaccharides, and the extent of interaction depends on the specific primary structure of each polysaccharide.
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Affiliation(s)
- Barbara Bellich
- Advanced Translational Diagnostics Laboratory, Institute for Maternal and Child Health-IRCCS "Burlo Garofolo", Via dell'Istria 65/1, 34137 Trieste, Italy
| | - Michele Cacioppo
- Department of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - Rita De Zorzi
- Department of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - Roberto Rizzo
- Department of Life Sciences, Bld C11 University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - John W Brady
- Food Science Department, Cornell University, 101A Stocking Hall, Ithaca, NY 14853, USA
| | - Paola Cescutti
- Department of Life Sciences, Bld C11 University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy.
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Cacioppo M, De Zorzi R, Syrgiannis Z, Bellich B, Bertoncin P, Jou IA, Brady JW, Rizzo R, Cescutti P. Microscopy and modelling investigations on the morphology of the biofilm exopolysaccharide produced by Burkholderia multivorans strain C1576. Int J Biol Macromol 2023; 253:127294. [PMID: 37813217 PMCID: PMC10872726 DOI: 10.1016/j.ijbiomac.2023.127294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 09/26/2023] [Accepted: 10/05/2023] [Indexed: 10/11/2023]
Abstract
Bacteria form very often biofilms where they embed in a self-synthesized matrix exhibiting a gel-like appearance. Matrices offer several advantages, including defence against external threats and the easiness of intercellular communication. In infections, biofilm formation enhances bacteria resistance against antimicrobials, causing serious clinical problems for patients' treatments. Biofilm matrices are composed of proteins, extracellular DNA, and polysaccharides, the latter being the major responsible for matrix architecture. The repeating unit of the biofilm polysaccharide synthesized by Burkholderia multivorans strain C1576 contains two mannoses and two sequentially linked rhamnoses, one of them 50 % methylated on C-3. Rhamnose, a 6-deoxysugar, has lower polarity than other common monosaccharides and its methylation further reduces polarity. This suggests a possible role of this polysaccharide in the biofilm matrix; in fact, computer modelling and atomic force microscopy studies evidenced intra- and inter-molecular non-polar interactions both within polysaccharides and with aliphatic molecules. In this paper, the polysaccharide three-dimensional morphology was investigated using atomic force microscopy in both solid and solution states. Independent evidence of the polymer conformation was obtained by transmission electron microscopy which confirmed the formation of globular compact structures. Finally, data from computer dynamic simulations were used to model the three-dimensional structure.
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Affiliation(s)
- Michele Cacioppo
- Department of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - Rita De Zorzi
- Department of Chemical and Pharmaceutical Sciences, INSTM UdR Trieste, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - Zois Syrgiannis
- Simpson Querrey Institute, Northwestern University, Chicago, IL 60611, USA; Department of Chemistry, Northwestern University, Evanston, IL 60208, USA
| | - Barbara Bellich
- Department of Life Sciences, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - Paolo Bertoncin
- Department of Life Sciences, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - Ining A Jou
- Food Science Department, Cornell University, 101A Stocking Hall, Ithaca, NY 14853, USA
| | - John W Brady
- Food Science Department, Cornell University, 101A Stocking Hall, Ithaca, NY 14853, USA
| | - Roberto Rizzo
- Department of Life Sciences, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy
| | - Paola Cescutti
- Department of Life Sciences, University of Trieste, Via Licio Giorgieri 1, 34127 Trieste, Italy.
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Tong CY, Lim SL, Chua MX, Derek CJC. Uncovering the role of algal organic matter biocoating on Navicula incerta cell deposition and biofilm formation. Bioengineered 2023; 14:2252213. [PMID: 37695682 PMCID: PMC10496527 DOI: 10.1080/21655979.2023.2252213] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Revised: 05/23/2023] [Accepted: 06/01/2023] [Indexed: 09/13/2023] Open
Abstract
Spontaneous natural biofilm concentrates microalgal biomass on solid supports. However, the biofilm is frequently susceptible to exfoliation upon nutrient deficiency, particularly found in aged biofilm. Therefore, this study highlights a novel biofilm cultivation technique by pre-depositing the algal organic matters from marine diatom, Navicula incerta onto microporous polyvinylidene fluoride membrane to further strengthen the biofilm developed. Due to the improvement in membrane surface roughness and hydrophobicity, cells adhered most abundantly to soluble extrapolymeric substances-coated (sEPS) (76× 106± 16× 106 cells m-2), followed by bounded EPS-coated (57.67× 106± 0.33× 106 cells m-2), internally organic matter (IOM)-coated (39.00× 106± 5.19× 106 cells m-2), and pristine control the least (6.22× 106± 0.77× 106 cells m-2) at 24th h. Surprisingly, only bEPS-coated membrane demonstrated an increase in cell adhesion toward the end of the experiment at 72 h. The application of the bio-coating has successfully increased the rate of cell attachment by at least 45.3% upon inoculation and achieved as high as 89.9% faster attachment at 72 hours compared to the pristine control group. Soluble polysaccharides and proteins might be carried along by the cells adhering onto membranes hence resulting in a built up of EPS hydrophobicity (>70% in average on bio-coated membranes) over time as compared with pristine (control) that only recorded an average of approximately 50% hydrophobicity. Interestingly, cells grown on bio-coated membranes accumulated more internally bounded polysaccharides, though bio-coating had no discernible impact on the production of both externally and internally bounded protein. The collective findings of this study reveal the physiological alterations of microalgal biofilms cultured on bio-coated membranes.
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Affiliation(s)
- C. Y. Tong
- School of Chemical Engineering, Engineering Campus, Universiti Sains Malaysia, Nibong Tebal, Penang, Malaysia
| | - Siew Li Lim
- School of Chemical Engineering, Engineering Campus, Universiti Sains Malaysia, Nibong Tebal, Penang, Malaysia
| | - Mei Xia Chua
- School of Chemical Engineering, Engineering Campus, Universiti Sains Malaysia, Nibong Tebal, Penang, Malaysia
| | - C. J. C. Derek
- School of Chemical Engineering, Engineering Campus, Universiti Sains Malaysia, Nibong Tebal, Penang, Malaysia
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Wang S, Wang G, Yan P, Chen Y, Fang F, Guo J. Non-filamentous sludge bulking induced by exopolysaccharide variation in structure and properties during aerobic granulation. THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 876:162786. [PMID: 36907402 DOI: 10.1016/j.scitotenv.2023.162786] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2022] [Revised: 02/13/2023] [Accepted: 03/06/2023] [Indexed: 06/18/2023]
Abstract
The forming mechanism of non-filamentous sludge bulking during aerobic granulation were investigated basing on three feeding strategies (R1 direct aeration after fast feeding, R2 anaerobic stirring after fast feeding and R3 anaerobic plug-flow slow feeding). Results showed that strong selection stress (shortening settling time) led to a sharp flocs washout and the subsequent increase of food to microorganisms (F/M) in R1 and R3 reactors, but not found in R2 due to the different strategies of feeding modes. With the increase of F/M, zeta potential and hydrophobicity of sludge surfaces significantly decreased and thus leading to an enhanced repulsive force and energy barriers for sludge aggregation. Particularly, when F/M exceeded 1.2 kgCOD/(kgMLSS·d), non-filamentous sludge bulking was ultimately triggered in R1 and R3. Further analysis showed that massive extracellular exopolysaccharide (PS) accumulated on the surfaces of non-filamentous bulking sludge due to the increased abundance of the microorganisms related to PS secretion during sludge bulking. In addition, significantly increased intracellular second messenger (c-di-GMP), a key substance regulating PS biosynthesis, was confirmed via its concentration determination as well as microbial function prediction analysis, which played a critical role in sludge bulking. Combing with the systematic detection from surface plasmon resonance system, rheometer and size-exclusion chromatography-multiangle laser light detection-refractive index system, higher molecular weight, compact conformation, higher viscosity and higher hydrophilicity was determined in sludge bulking PS relative to PS extracted from non-filamentous bulking sludge. Clearly, the changes of PS (content, structures and properties) driven by c-di-GMP are the dominant mechanism for the formation of non-filamentous sludge bulking during aerobic granulation. This work could provide theoretical support for successful start-up and application of aerobic granular sludge technology.
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Affiliation(s)
- Shuai Wang
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China; College of Environmental Sciences and Engineering, Peking University, Beijing 100871, China
| | - Gonglei Wang
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Peng Yan
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Youpeng Chen
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Fang Fang
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China.
| | - Jinsong Guo
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
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Jou IA, Yoo AS, Dionne EV, Brady JW. Potential of mean force conformational energy maps for disaccharide linkages of the Burkholderia multivorans exopolysaccharide C1576 in aqueous solution. Carbohydr Res 2023; 524:108741. [PMID: 36716692 PMCID: PMC9974804 DOI: 10.1016/j.carres.2023.108741] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 12/30/2022] [Accepted: 01/09/2023] [Indexed: 01/19/2023]
Abstract
Potential of Mean Force Ramachandran energy maps in aqueous solution have been prepared for all of the glycosidic linkages found in the C1576 exopolysaccharide from the biofilms of the bacterial species Burkholderia multivorans, a member of the Burkholderia cepacian complex that was isolated from a cystic fibrosis patient. C1576 is a rhamnomannan with a tetrasaccharide repeat unit. In general, for the four linkage types in this polymer, hydration did not produce dramatic changes in the Ramachandran energy surfaces, with the 3-methyl-α-d-rhamnopyranose-(1→3)-α-d-rhamnopyranose case exhibiting the greatest hydration change, with the global minimum energy conformation shifting by more than 80° in ψ. However, hydration did reduce the rigidity of all the linkages, increasing the overall flexibility of this polysaccharide.
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Affiliation(s)
- Ining A Jou
- Department of Food Science, Cornell University, Ithaca, NY, 14853, USA
| | - Andrew S Yoo
- Department of Food Science, Cornell University, Ithaca, NY, 14853, USA
| | - Elyssa V Dionne
- Department of Food Science, Cornell University, Ithaca, NY, 14853, USA
| | - John W Brady
- Department of Food Science, Cornell University, Ithaca, NY, 14853, USA.
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Chemical Structures and Antioxidant Activities of Polysaccharides from Carthamus tinctorius L. Polymers (Basel) 2022; 14:polym14173510. [PMID: 36080585 PMCID: PMC9460231 DOI: 10.3390/polym14173510] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 08/18/2022] [Accepted: 08/22/2022] [Indexed: 01/30/2023] Open
Abstract
Two polysaccharides from Carthamus tinctorius L. (CTLP-1 and CTLP-2) were purified, and their structures were analyzed by physical and chemical testing. CTLP-1 had a mass of 5900 Da that was composed of arabinose, glucose, and galactose with a mass molar ratio of 6.7:4.2:1. The backbone of CTLP-1 was →1)-α-GalAp-(1→4)-α-Arap-(1→2)-α-Glup-(4→. CTLP-2 had a mass of 8200 Da that was composed of arabinose, glucose, and galactose with a mass molar ratio of 16.76:4.28:1. The backbone of CTLP-2 was →1)-α-Galp-(2,6 →1)-α-Arap-(4,6 →1)-α-Glup-(3→. Both of them exhibited a high reducing power, hydroxyl radical scavenging activity, DPPH radical scavenging activity and ABTS radical scavenging activity, moderate Fe2+ chelating activity and superoxide anion scavenging activity, implying that they might be potential antioxidants.
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Yang F, Qu J, Huang X, Chen Y, Yan P, Guo J, Fang F. Phosphorus deficiency leads to the loosening of activated sludge: The role of exopolysaccharides in aggregation. CHEMOSPHERE 2022; 290:133385. [PMID: 34942214 DOI: 10.1016/j.chemosphere.2021.133385] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/24/2021] [Revised: 11/12/2021] [Accepted: 12/18/2021] [Indexed: 06/14/2023]
Abstract
Whether phosphorus deficiency in influent will affect the aggregation and sedimentation of activated sludge needs to be further clarified. This paper systematically studied the structure, aggregation and settlement of activated sludge, and the composition, properties and chemical structure of extracellular polymers and microbial community structure of sludge under different influent phosphorus contents to determine the causes of sludge aggregation and structural deterioration. The results show that phosphorus deficiency in influent leads to a decrease in the aggregation capacity and a loose structure of activated sludge, and the reduction of hydrophobic interactions is the main factor of sludge aggregation and structural deterioration. The content, functional groups and protein secondary structure of extracellular protein were almost unchanged. An increase in the content and hydrophilicity of extracellular polysaccharide (PS) results in a decrease in sludge hydrophobicity. Under phosphorus deficiency, the changes in microbial species related to PS secretion were the reasons for the increase in PS content and hydrophilicity. The negative effects of PS content and hydrophilicity on sludge aggregation and structure are important findings of this work and are expected to be useful for better understanding the restoration of activated sludge performance in the treatment of phosphorus-deficient wastewater.
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Affiliation(s)
- Fan Yang
- College of Environment and Ecology, Chongqing University, Chongqing, 400045, China
| | - Jianwei Qu
- College of Environment and Ecology, Chongqing University, Chongqing, 400045, China
| | - Xiaoxiao Huang
- College of Environment and Ecology, Chongqing University, Chongqing, 400045, China
| | - Youpeng Chen
- College of Environment and Ecology, Chongqing University, Chongqing, 400045, China
| | - Peng Yan
- College of Environment and Ecology, Chongqing University, Chongqing, 400045, China
| | - Jinsong Guo
- College of Environment and Ecology, Chongqing University, Chongqing, 400045, China
| | - Fang Fang
- College of Environment and Ecology, Chongqing University, Chongqing, 400045, China.
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Wang S, Li H, Zhang A, Fang F, Chen Y, Yan P, Guo J, Ma T, Shen Y. Importance of exopolysaccharide branched chains in determining the aggregation ability of anammox sludge. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 734:139470. [PMID: 32464401 DOI: 10.1016/j.scitotenv.2020.139470] [Citation(s) in RCA: 16] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/10/2020] [Revised: 05/13/2020] [Accepted: 05/14/2020] [Indexed: 06/11/2023]
Abstract
The high aggregation ability of anammox granular sludge is an issue of wide concern; however, the mechanism needs to be further clarified. In this study, selective hydrolysis experiments were performed to determine the role of exopolysaccharide (PS) branched chains and proteins for the aggregation mechanism of anammox granular sludge. The results revealed that selective hydrolysis of proteins hardly affected the granular aggregation while the hydrolysis of PS branched chains led to a decrease in the sludge zeta potential by 17.3% (β-amylase group) and 24.1% (isoamylase group), a decrease of hydrophobicity by 11.6% (β-amylase group) and 17.7% (isoamylase group), an increase of surface free energy by 36.8% (β-amylase group) and 55.1% (isoamylase group) and the deterioration of the PS self-assembly ability. In addition, FTIR and XPS spectra analysis showed that the disruption of PS branched chains resulted in a higher proportion of hydrophilic and electronegative groups, which hindered bacterial aggregation, which was further confirmed by XDLVO theory. The key role of the PS chain structure in sludge aggregation is a critical finding of this work that provides helpful insights for the application of anammox process.
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Affiliation(s)
- Shuai Wang
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Hanxiang Li
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Aiyu Zhang
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Fang Fang
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China.
| | - Youpeng Chen
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Peng Yan
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Jinsong Guo
- College of Environment and Ecology, Chongqing University, Chongqing 400045, China
| | - Tengfei Ma
- National Base of International Science and Technology Cooperation for Intelligent Manufacturing Service, Chongqing Key Laboratory of Catalysis & New Environmental Materials, Chongqing Technology and Business University, Chongqing 400067, China; Chongqing South-to-Thais Environmental Protection Technology Research Institute Co., Ltd., Chongqing 400060, China
| | - Yu Shen
- National Base of International Science and Technology Cooperation for Intelligent Manufacturing Service, Chongqing Key Laboratory of Catalysis & New Environmental Materials, Chongqing Technology and Business University, Chongqing 400067, China; Chongqing South-to-Thais Environmental Protection Technology Research Institute Co., Ltd., Chongqing 400060, China.
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Jou IA, Caterino M, Schnupf U, Rizzo R, Cescutti P, Brady JW. Ramachandran conformational energy maps for disaccharide linkages found in Burkholderia multivorans biofilm polysaccharides. Int J Biol Macromol 2020; 143:501-509. [DOI: 10.1016/j.ijbiomac.2019.11.037] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2019] [Revised: 10/29/2019] [Accepted: 11/05/2019] [Indexed: 10/25/2022]
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