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Zhao C, Cui X, Yu X, Ning X, Yu H, Li J, Yang B, Pan Y, Jiang L. Molecular evolution and functional diversification of metal tolerance protein families in cereals plants and function of maize MTP protein. Int J Biol Macromol 2024; 274:133071. [PMID: 38871096 DOI: 10.1016/j.ijbiomac.2024.133071] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 05/24/2024] [Accepted: 06/08/2024] [Indexed: 06/15/2024]
Abstract
Plants employ metal tolerance proteins (MTPs) to confer tolerance by sequestering excess ions into vacuoles. MTPs belong to the cation diffusion facilitator (CDF) family, which facilitates the transport of divalent transition metal cations. In this study, we conducted a comprehensive analysis of the MTP gene families across 21 plant species, including maize (Zea mays). A total of 247 MTP genes were identified within these plant genomes and categorized into distinct subgroups, namely Zn-CDF, Mn-CDF, and Fe/Zn-CDF, based on phylogenetic analyses. This investigation encompassed the characterization of genomic distribution, gene structures, cis-regulatory elements, collinearity relationships, and gene ontology functions associated with MTPs. Transcriptomic analyses unveiled stress-specific expression patterns of MTP genes under various abiotic stresses. Moreover, quantitative RT-PCR assays were employed to assess maize MTP gene responses to diverse heavy metal stress conditions. Functional validation of metal tolerance roles was achieved through heterologous expression in yeast. This integrated evolutionary scrutiny of MTP families in cereals furnishes a valuable framework for the elucidation of MTP functions in subsequent studies. Notably, the prioritized MTP gene ZmMTP6 emerged as a positive regulator of plant Cd tolerance, thereby offering a pivotal genetic asset for the development of Cd-tolerant crops, particularly maize cultivars.
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Affiliation(s)
- Chao Zhao
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China; Beidahuang Kenfeng Seed Co., Ltd, Harbin 150000, Heilongjiang Province, PR China.
| | - Xueyu Cui
- Key Laboratory of Beibu Gulf Environment Change and Resources Utilization of Ministry of Education, Nanning Normal University, Nanning 530001, Guangxi Zhuang Autonomous Region Province, PR China
| | - Xiaoming Yu
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China.
| | - Xilin Ning
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China
| | - Haiyan Yu
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China
| | - Jianming Li
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China
| | - Baiming Yang
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China.
| | - Yexing Pan
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China.
| | - Long Jiang
- College of Agronomy, Jilin Agricultural Science and Technology University, Jilin 132101, Jilin Province, PR China.
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Ding Z, Yao K, Yao Y, Pan X, Luo L, Li L, Wang C, Liao W. Characterization of the GGP gene family in potato (Solanum tuberosum L.) and Pepper (Capsicum annuum L.) and its expression analysis under hormonal and abiotic stresses. Sci Rep 2024; 14:15329. [PMID: 38961199 PMCID: PMC11222470 DOI: 10.1038/s41598-024-66337-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Accepted: 07/01/2024] [Indexed: 07/05/2024] Open
Abstract
GDP-L-galactose phosphorylase (GGP) is a key rate-limiting enzyme in plant ascorbic acid synthesis, which plays an important role in plant growth and development as well as stress response. However, the presence of GGP and its function in potato and pepper are not known. In this study, we first identified two GGP genes in each potato and pepper genomes using a genome-wide search approach. We then analyzed their physicochemical properties, conserved domains, protein structures and phylogenetic relationships. Phylogenetic tree analysis revealed that members of the potato and pepper GGP gene families are related to eggplant (Solanum melongena L.), Arabidopsis (Arabidopsis thaliana L.), tobacco (Nicotiana tabacum L.) and tomato (Solanum lycopersicum L.), with tomato being the most closely related. The promoter sequences mainly contain homeopathic elements such as light-responsive, hormone-responsive and stress-responsive, with light-responsive elements being the most abundant. By analyzing the structure of the genes, it was found that there is no transmembrane structure or signal peptide in the GGP gene family of potatoes and peppers, and that all of its members are hydrophilic proteins. The expression profiles of different tissues show that StGGP1 has the highest expression levels in leaves, StGGP2 has the highest expression levels in stamens, and CaGGPs have the highest expression levels in the early stages of fruit development (Dev1). It was found that StGGPs and CaGGPs genes showed different response to phytohormones and abiotic stresses. Abscisic acid (ABA) treatment induced the most significant change in the expression of StGGPs, while the expression of CaGGPs showed the most pronounced change under methyl jasmonate (MeJA) treatment. StGGPs responded mainly to dark treatment, whereas CaGGPs responded mainly to NaCl stress. These results provide an important basis for a detailed study about the functions of GGP homologous genes in potato and pepper in response to abiotic stresses.
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Affiliation(s)
- Zhiqi Ding
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China
| | - Kangding Yao
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China
| | - Yandong Yao
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China
| | - Xuejuan Pan
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China
| | - Lizhen Luo
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China
| | - Long Li
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China
| | - Chunlei Wang
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China
| | - Weibiao Liao
- College of Horticulture, Gansu Agricultural University, Lanzhou, 730070, People's Republic of China.
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Baldet P, Mori K, Decros G, Beauvoit B, Colombié S, Prigent S, Pétriacq P, Gibon Y. Multi-regulated GDP-l-galactose phosphorylase calls the tune in ascorbate biosynthesis. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:2631-2643. [PMID: 38349339 PMCID: PMC11066804 DOI: 10.1093/jxb/erae032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/06/2023] [Accepted: 02/12/2024] [Indexed: 05/04/2024]
Abstract
Ascorbate is involved in numerous vital processes, in particular in response to abiotic but also biotic stresses whose frequency and amplitude increase with climate change. Ascorbate levels vary greatly depending on species, tissues, or stages of development, but also in response to stress. Since its discovery, the ascorbate biosynthetic pathway has been intensely studied and it appears that GDP-l-galactose phosphorylase (GGP) is the enzyme with the greatest role in the control of ascorbate biosynthesis. Like other enzymes of this pathway, its expression is induced by various environmental and also developmental factors. Although mRNAs encoding it are among the most abundant in the transcriptome, the protein is only present in very small quantities. In fact, GGP translation is repressed by a negative feedback mechanism involving a small open reading frame located upstream of the coding sequence (uORF). Moreover, its activity is inhibited by a PAS/LOV type photoreceptor, the action of which is counteracted by blue light. Consequently, this multi-level regulation of GGP would allow fine control of ascorbate synthesis. Indeed, experiments varying the expression of GGP have shown that it plays a central role in response to stress. This new understanding will be useful for developing varieties adapted to future environmental conditions.
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Affiliation(s)
- Pierre Baldet
- Université de Bordeaux, INRAE, UMR1332 BFP, 33882 Villenave d’Ornon, France
| | - Kentaro Mori
- Université de Bordeaux, INRAE, UMR1332 BFP, 33882 Villenave d’Ornon, France
| | - Guillaume Decros
- Max Planck-Institute of Plant Molecular Biology, Potsdam-Golm, Germany
| | - Bertrand Beauvoit
- Université de Bordeaux, INRAE, UMR1332 BFP, 33882 Villenave d’Ornon, France
| | - Sophie Colombié
- Université de Bordeaux, INRAE, UMR1332 BFP, 33882 Villenave d’Ornon, France
| | - Sylvain Prigent
- Université de Bordeaux, INRAE, UMR1332 BFP, 33882 Villenave d’Ornon, France
- Bordeaux Metabolome, MetaboHUB, PHENOME-EMPHASIS, 33140 Villenave d’Ornon, France
| | - Pierre Pétriacq
- Université de Bordeaux, INRAE, UMR1332 BFP, 33882 Villenave d’Ornon, France
- Bordeaux Metabolome, MetaboHUB, PHENOME-EMPHASIS, 33140 Villenave d’Ornon, France
| | - Yves Gibon
- Université de Bordeaux, INRAE, UMR1332 BFP, 33882 Villenave d’Ornon, France
- Bordeaux Metabolome, MetaboHUB, PHENOME-EMPHASIS, 33140 Villenave d’Ornon, France
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Yang C, Li H, Liang H, Huang B, Sun Y, Yang W, Wu Y, Cui Y, Hai J, Dong Z. Stereoselectivity of paclobutrazol enantiomers to oxidative stress in wheat. Chirality 2024; 36:e23638. [PMID: 38384151 DOI: 10.1002/chir.23638] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 12/11/2023] [Accepted: 12/19/2023] [Indexed: 02/23/2024]
Abstract
Chiral pesticides have the special chiral structures, so enantioselective biological effects are usually observed in living organisms. Current study used paclobutrazol as a case study and explored the enantioselective degradation and oxidative stress effect on wheat. The results demonstrated that the degradation of R-paclobutrazol was faster than S-paclobutrazol significantly and improved the content of MDA and O2 - in wheat plants, which proved that the R-paclobutrazol induced oxidative damage in wheat, showing selective biological effects, and S-paclobutrazol was friendly to wheat. This study provided a theoretical basis for the selective activity of chiral pesticides and the development of chiral pesticide monomers.
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Affiliation(s)
- Chao Yang
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Hao Li
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Huajun Liang
- Maanshan Agricultural and Rural Bureau, Xianyang, Shaanxi Province, People's Republic of China
| | - Bo Huang
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Yitao Sun
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Wenlong Yang
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Yilun Wu
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Youhe Cui
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Jiangbo Hai
- College of Agronomy, Northwest A&F University, Xianyang, Shaanxi Province, People's Republic of China
| | - Zhoujia Dong
- Qinghai Tongren City Agriculture and Animal Husbandry Comprehensive Service Center, Xianyang, Shaanxi Province, People's Republic of China
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Su J, Li M, Yang H, Shu H, Yu K, Cao H, Xu G, Wang M, Zhu Y, Zhu Y, Ma C, Shao J. Enrichment of grape berries and tomato fruit with health-promoting tartaric acid by expression of the Vitis vinifera transketolase VvTK2 gene. Int J Biol Macromol 2024; 257:128734. [PMID: 38086429 DOI: 10.1016/j.ijbiomac.2023.128734] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2023] [Revised: 12/07/2023] [Accepted: 12/08/2023] [Indexed: 01/27/2024]
Abstract
Tartaric acid (TA) is a major non-fermentable plant soluble acid that abundantly occur in grapes and wines, imparting low pH and tart flavour to berries thereby regulating numerous quality attributes of wine, such as flavour, microbial stability, and aging potential. Evaluation of acidity in mature fruits of 21 wine grape (Vitis vinifera) varieties revealed significant variation between 'Beichun' and 'Gewürztraminer', which was correlated with TA content. RNA-seq analysis of fruits from the two cultivars at different developmental stages revealed that a transketolase gene, VvTK2, was significantly dominantly expressed in the high TA phenotype 'Beichun' variety. Subcellular localization assay showed that VvTK2 protein was located in the chloroplast. Virus-induced VvTK2 gene silencing significantly decreased the expression of 2-keto-L-gulonic acid reductase (Vv2-KGR) as well as L-idonate dehydrogenase (VvL-IdnDH3) and inhibited TA accumulation, while its transient over-expression in grape showed the opposite results. Heterologous VvTK2 over-expression in tomato demonstrated its obvious capacity to induce TA synthesis. Overall, these results highlights a novel role of VvTK2 in modulating TA biosynthesis, which could be an excellent strategy for future genetic improvement of grape flavour.
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Affiliation(s)
- Jing Su
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Menghan Li
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Huanqi Yang
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Helin Shu
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Kunmiao Yu
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Huiling Cao
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Gezhe Xu
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Minghui Wang
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Yifan Zhu
- College of Plant protection, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Yingan Zhu
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China
| | - Chunhua Ma
- College of Landscape and Horticulture, Yunnan Agricultural University, Kunming 650201, Yunnan, China.
| | - Jianhui Shao
- College of Plant protection, Yunnan Agricultural University, Kunming 650201, Yunnan, China.
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Mishra S, Sharma A, Srivastava AK. Ascorbic acid: a metabolite switch for designing stress-smart crops. Crit Rev Biotechnol 2024:1-17. [PMID: 38163756 DOI: 10.1080/07388551.2023.2286428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 11/02/2023] [Indexed: 01/03/2024]
Abstract
Plant growth and productivity are continually being challenged by a diverse array of abiotic stresses, including: water scarcity, extreme temperatures, heavy metal exposure, and soil salinity. A common theme in these stresses is the overproduction of reactive oxygen species (ROS), which disrupts cellular redox homeostasis causing oxidative damage. Ascorbic acid (AsA), commonly known as vitamin C, is an essential nutrient for humans, and also plays a crucial role in the plant kingdom. AsA is synthesized by plants through the d-mannose/l-galactose pathway that functions as a powerful antioxidant and protects plant cells from ROS generated during photosynthesis. AsA controls several key physiological processes, including: photosynthesis, respiration, and carbohydrate metabolism, either by acting as a co-factor for metabolic enzymes or by regulating cellular redox-status. AsA's multi-functionality uniquely positions it to integrate and recalibrate redox-responsive transcriptional/metabolic circuits and essential biological processes, in accordance to developmental and environmental cues. In recognition of this, we present a systematic overview of current evidence highlighting AsA as a central metabolite-switch in plants. Further, a comprehensive overview of genetic manipulation of genes involved in AsA metabolism has been provided along with the bottlenecks and future research directions, that could serve as a framework for designing "stress-smart" crops in future.
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Affiliation(s)
- Shefali Mishra
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, India
| | - Ankush Sharma
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, India
- Homi Bhabha National Institute, Mumbai, India
| | - Ashish Kumar Srivastava
- Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Centre, Mumbai, India
- Homi Bhabha National Institute, Mumbai, India
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Jangra A, Chaturvedi S, Sihag S, Sharma G, Tiwari S, Chhokar V. Identification and functional characterization of a novel aldo-keto reductase from Aloe vera. PLANTA 2023; 258:107. [PMID: 37897513 DOI: 10.1007/s00425-023-04256-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2023] [Accepted: 09/29/2023] [Indexed: 10/30/2023]
Abstract
MAIN CONCLUSION The present investigation profoundly asserted the catalytic potential of plant-based aldo-ketoreductase, postulating its role in polyketide biosynthesis and providing new insights for tailored biosynthesis of vital plant polyketides for therapeutics. Plants hold great potential as a future source of innovative biocatalysts, expanding the possibilities within chemical reactions and generating a variety of benefits. The aldo-keto reductase (AKR) superfamily includes a huge collection of NAD(P)H-dependent oxidoreductases that carry out a variety of redox reactions essential for biosynthesis, detoxification, and intermediary metabolism. The present study involved the isolation, cloning, and purification of a novel aldo-ketoreductase (AvAKR) from the leaves of Aloe vera (Aloe barbadensis Miller) by heterologous gene expression in Escherichia coli based on the unigene sequences of putative ketoreductase and cDNA library screening by oligonucleotide hybridization. The in-silico structural analysis, phylogenetic relationship, and molecular modeling were outranged to approach the novelty of the sequence. Additionally, agroinfiltration of the candidate gene tagged with a green fluorescent protein (GFP) was employed for transient expression in the Nicotiana benthamiana to evaluate the sub-cellular localization of the candidate gene. The AvAKR preferred cytoplasmic localization and shared similarities with the known plant AKRs, keeping the majority of the conserved active-site residues in the AKR superfamily enzymes. The enzyme facilitated the NADPH-dependent reduction of various carbonyl substrates, including benzaldehyde and sugars, proclaiming a broad spectrum range. Our study successfully isolated and characterized a novel aldo-ketoreductase (AvAKR) from Aloe vera, highlighting its versatile NADPH-dependent carbonyl reduction proficiency therewith showcasing its potential as a versatile biocatalyst in diverse redox reactions.
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Affiliation(s)
- Alka Jangra
- Department of Bio and Nano Technology, Guru Jambheshwar University of Science and Technology, Hisar, Haryana, 125001, India
| | - Siddhant Chaturvedi
- Plant Tissue Culture and Genetic Engineering Lab, Department of Biotechnology, Ministry of Science and Technology (Government of India), National Agri-Food Biotechnology Institute (NABI), Sector 81, Knowledge City, S.A.S. Nagar, Mohali, Punjab, 140306, India
- Goswami Tulsidas Government Post Graduate College (Bundelkhand University, Jhansi), Karwi, Chitrakoot, Uttar Pradesh, 210205, India
| | - Sonia Sihag
- Department of Bio and Nano Technology, Guru Jambheshwar University of Science and Technology, Hisar, Haryana, 125001, India
| | - Garima Sharma
- Department of Bio and Nano Technology, Guru Jambheshwar University of Science and Technology, Hisar, Haryana, 125001, India
| | - Siddharth Tiwari
- Plant Tissue Culture and Genetic Engineering Lab, Department of Biotechnology, Ministry of Science and Technology (Government of India), National Agri-Food Biotechnology Institute (NABI), Sector 81, Knowledge City, S.A.S. Nagar, Mohali, Punjab, 140306, India
| | - Vinod Chhokar
- Department of Bio and Nano Technology, Guru Jambheshwar University of Science and Technology, Hisar, Haryana, 125001, India.
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