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Meng Z, Wang J, Lin L, Wu C. Sensitivity analysis with iterative outlier detection for systematic reviews and meta-analyses. Stat Med 2024; 43:1549-1563. [PMID: 38318993 PMCID: PMC10947935 DOI: 10.1002/sim.10008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2022] [Revised: 10/03/2023] [Accepted: 12/21/2023] [Indexed: 02/07/2024]
Abstract
Meta-analysis is a widely used tool for synthesizing results from multiple studies. The collected studies are deemed heterogeneous when they do not share a common underlying effect size; thus, the factors attributable to the heterogeneity need to be carefully considered. A critical problem in meta-analyses and systematic reviews is that outlying studies are frequently included, which can lead to invalid conclusions and affect the robustness of decision-making. Outliers may be caused by several factors such as study selection criteria, low study quality, small-study effects, and so on. Although outlier detection is well-studied in the statistical community, limited attention has been paid to meta-analysis. The conventional outlier detection method in meta-analysis is based on a leave-one-study-out procedure. However, when calculating a potentially outlying study's deviation, other outliers could substantially impact its result. This article proposes an iterative method to detect potential outliers, which reduces such an impact that could confound the detection. Furthermore, we adopt bagging to provide valid inference for sensitivity analyses of excluding outliers. Based on simulation studies, the proposed iterative method yields smaller bias and heterogeneity after performing a sensitivity analysis to remove the identified outliers. It also provides higher accuracy on outlier detection. Two case studies are used to illustrate the proposed method's real-world performance.
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Affiliation(s)
- Zhuo Meng
- Department of Statistics, College of Arts and Sciences, Florida State University, Tallahassee, FL, U.S.A
| | - Jingshen Wang
- Division of Biostatistics, School of Public Health, University of California, Berkeley, Berkeley, CA, U.S.A
| | - Lifeng Lin
- Department of Epidemiology and Biostatistics, Mel and Enid Zuckerman College of Public Health, The University of Arizona, Tucson, AZ, U.S.A
| | - Chong Wu
- Department of Biostatistics, The University of Texas MD Anderson Cancer Center, Houston, TX, U.S.A
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Brignardello-Petersen R, Guyatt GH, Mustafa RA, Chu DK, Hultcrantz M, Schünemann HJ, Tomlinson G. GRADE guidelines 33: Addressing imprecision in a network meta-analysis. J Clin Epidemiol 2021; 139:49-56. [PMID: 34293434 DOI: 10.1016/j.jclinepi.2021.07.011] [Citation(s) in RCA: 42] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2020] [Revised: 06/11/2021] [Accepted: 07/15/2021] [Indexed: 12/25/2022]
Abstract
OBJECTIVE This article describes GRADE guidance for assessing imprecision when rating the certainty of the evidence from network meta-analysis. STUDY DESIGN AND SETTING A project group within the GRADE working group conducted iterative discussions, computer simulations, and presentations at GRADE working group meetings to produce and obtain approval for this guidance. RESULTS When addressing imprecision of a network estimate, reviewers should consider the 95% confidence or credible interval, and the optimal information size. If the 95% confidence or credible interval crosses a pre-specified threshold, reviewers should rate down the certainty of the evidence. If the 95% confidence interval does not cross any pre-specfied threshold, reviewers should consider the optimal information size. Because addressing the optimal information size may be challenging, reviewers can use the effect size to decide if any calculations are necessary. When the size of the effect is modest or the optimal information size is met, reviewers should not rate down for imprecision. CONCLUSION Reviewers should use this guidance when to appropriately address imprecision in the context of the assessment of certainty of evidence from network meta-analysis.
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Affiliation(s)
- Romina Brignardello-Petersen
- Department of Health Research Methods, Evidence and Impact, McMaster University, Hamilton, Ontario, L8S 4L8, Canada.
| | - Gordon H Guyatt
- Department of Health Research Methods, Evidence and Impact, McMaster University, Hamilton, Ontario, L8S 4L8, Canada
| | - Reem A Mustafa
- Department of Health Research Methods, Evidence and Impact, McMaster University, Hamilton, Ontario, L8S 4L8, Canada; Department of Internal Medicine, Division of Nephrology and Hypertension, University of Kansas Medical Center, Kansas City, KS 66160, United States
| | - Derek K Chu
- Department of Health Research Methods, Evidence and Impact, McMaster University, Hamilton, Ontario, L8S 4L8, Canada
| | - Monica Hultcrantz
- Swedish Agency on Health Technology Assessment and Assessment of Social Services (SBU), Stockholm, Sweden
| | - Holger J Schünemann
- Department of Health Research Methods, Evidence and Impact, McMaster University, Hamilton, Ontario, L8S 4L8, Canada; Department of Medicine & Institut für Evidence in Medicine, Medical Center & Faculty of Medicine, University of Freiburg, Freiburg, 79110, Germany
| | - George Tomlinson
- Department of Medicine, University Health Network, Toronto, Ontario, M5G 2C4, Canada
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Thompson T, Dias S, Poulter D, Weldon S, Marsh L, Rossato C, Shin JI, Firth J, Veronese N, Dragioti E, Stubbs B, Solmi M, Maher CG, Cipriani A, Ioannidis JPA. Efficacy and acceptability of pharmacological and non-pharmacological interventions for non-specific chronic low back pain: a protocol for a systematic review and network meta-analysis. Syst Rev 2020; 9:130. [PMID: 32503666 PMCID: PMC7275431 DOI: 10.1186/s13643-020-01398-3] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Accepted: 05/25/2020] [Indexed: 12/15/2022] Open
Abstract
BACKGROUND Despite the enormous financial and humanistic burden of chronic low back pain (CLBP), there is little consensus on what constitutes the best treatment options from a multitude of competing interventions. The objective of this network meta-analysis (NMA) is to determine the relative efficacy and acceptability of primary care treatments for non-specific CLBP, with the overarching aim of providing a comprehensive evidence base for informing treatment decisions. METHODS We will perform a systematic search to identify randomised controlled trials of interventions endorsed in primary care guidelines for the treatment of non-specific CLBP in adults. Information sources searched will include major bibliographic databases (MEDLINE, Embase, CENTRAL, CINAHL, PsycINFO and LILACS) and clinical trial registries. Our primary outcomes will be patient-reported pain ratings and treatment acceptability (all-cause discontinuation), and secondary outcomes will be functional ability, quality of life and patient/physician ratings of overall improvement. A hierarchical Bayesian class-based NMA will be performed to determine the relative effects of different classes of pharmacological (NSAIDs, opioids, paracetamol, anti-depressants, muscle relaxants) and non-pharmacological (exercise, patient education, manual therapies, psychological therapy, multidisciplinary approaches, massage, acupuncture, mindfulness) interventions and individual treatments within a class (e.g. NSAIDs: diclofenac, ibuprofen, naproxen). We will conduct risk of bias assessments and threshold analysis to assess the robustness of the findings to potential bias. We will compute the effect of different interventions relative to placebo/no treatment for both short- and long-term efficacy and acceptability. DISCUSSION While many factors are important in selecting an appropriate intervention for an individual patient, evidence for the analgesic effects and acceptability of a treatment are key factors in guiding this selection. Thus, this NMA will provide an important source of evidence to inform treatment decisions and future clinical guidelines. SYSTEMATIC REVIEW REGISTRATION PROSPERO registry number: CRD42019138115.
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Affiliation(s)
- Trevor Thompson
- School of Human Sciences, University of Greenwich, Park Row, London, SE10 9LS, UK.
| | - Sofia Dias
- Centre for Reviews and Dissemination, University of York, York, UK
| | - Damian Poulter
- School of Human Sciences, University of Greenwich, Park Row, London, SE10 9LS, UK
| | - Sharon Weldon
- School of Health Sciences, University of Greenwich, London, SE9 2UG, UK.,Barts Health NHS Trust, The Royal London Hospital, Whitechapel Rd, Whitechapel, E1 1BB, UK
| | - Lucy Marsh
- School of Human Sciences, University of Greenwich, Park Row, London, SE10 9LS, UK
| | - Claire Rossato
- School of Human Sciences, University of Greenwich, Park Row, London, SE10 9LS, UK
| | - Jae Il Shin
- Department of Pediatrics, Yonsei University College of Medicine, Seoul, Republic of Korea
| | - Joseph Firth
- NICM Health Research Institute, Western Sydney University, Sydney, Australia.,Division of Psychology and Mental Health, University of Manchester, Manchester, UK
| | - Nicola Veronese
- National Research Council, Neuroscience Institute, Aging Branch, Padova, Italy
| | - Elena Dragioti
- Pain and Rehabilitation Centre and Department of Health, Medicine and Caring Sciences, Linköping University, Linköping, Sweden
| | - Brendon Stubbs
- King's College London and South London and Maudsley NHS Foundation Trust, London, UK
| | - Marco Solmi
- Neurosciences Department, University of Padua, Padua, Italy
| | | | - Andrea Cipriani
- Department of Psychiatry, University of Oxford, Oxford, UK.,Oxford Health NHS Foundation Trust, Warneford Hospital, Oxford, OX3 8AX, UK
| | - John P A Ioannidis
- Meta-Research Innovation Center at Stanford (METRICS) and Departments of Medicine, Health Research and Policy, Biomedical Science and Statistics, Stanford University, Stanford, CA, USA
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Lin L. Graphical augmentations to sample-size-based funnel plot in meta-analysis. Res Synth Methods 2019; 10:376-388. [PMID: 30664834 DOI: 10.1002/jrsm.1340] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2018] [Revised: 01/08/2019] [Accepted: 01/15/2019] [Indexed: 12/14/2022]
Abstract
Assessing publication bias is a critical procedure in meta-analyses for rating the synthesized overall evidence. Because statistical tests for publication bias are usually not powerful and only give P values that inform either the presence or absence of the bias, examining the asymmetry of funnel plots has been popular to investigate potentially missing studies and the direction of the bias. Most funnel plots present treatment effects against their standard errors, and the contours depicting studies' significance levels have been used in the plots to distinguish publication bias from other factors (such as heterogeneity and subgroup effects) that may cause the plots' asymmetry. However, treatment effects and their standard errors are frequently associated even if no publication bias exists (eg, both variables depend on the four data cells in a 2 × 2 table for the odds ratio), so standard-error-based funnel plots may lead to false positive conclusions when such association may not be negligible. In addition, the missingness of studies may relate to their sample sizes besides P values (which are partly determined by standard errors); studies with more samples are more likely published. Therefore, funnel plots based on sample sizes can be an alternative tool. However, the contours for standard-error-based funnel plots cannot be directly applied to sample-size-based ones. This article introduces contours for sample-size-based funnel plots of various effect sizes, which may help meta-analysts properly interpret such plots' asymmetry. We provide five examples to illustrate the use of the proposed contours.
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Affiliation(s)
- Lifeng Lin
- Department of Statistics, Florida State University, Tallahassee, Florida
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