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Pemberton JG, Tenkova T, Felgner P, Zimmerberg J, Balla T, Heuser J. Defining the EM-signature of successful cell-transfection. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.03.07.583927. [PMID: 38496608 PMCID: PMC10942431 DOI: 10.1101/2024.03.07.583927] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/19/2024]
Abstract
In this report, we describe the architecture of Lipofectamine 2000 and 3000 transfection- reagents, as they appear inside of transfected cells, using classical transmission electron microscopy (EM). We also demonstrate that they provoke consistent structural changes after they have entered cells, changes that not only provide new insights into the mechanism of action of these particular transfection-reagents, but also provide a convenient and robust method for identifying by EM which cells in any culture have been successfully transfected. This also provides clues to the mechanism(s) of their toxic effects, when they are applied in excess. We demonstrate that after being bulk-endocytosed by cells, the cationic spheroids of Lipofectamine remain intact throughout the entire time of culturing, but escape from their endosomes and penetrate directly into the cytoplasm of the cell. In so doing, they provoke a stereotypical recruitment and rearrangement of endoplasmic reticulum (ER), and they ultimately end up escaping into the cytoplasm and forming unique 'inclusion-bodies.' Once free in the cytoplasm, they also invariably develop dense and uniform coatings of cytoplasmic ribosomes on their surfaces, and finally, they become surrounded by 'annulate' lamellae' of the ER. In the end, these annulate-lamellar enclosures become the ultrastructural 'signatures' of these inclusion-bodies, and serve to positively and definitively identify all cells that have been effectively transfected. Importantly, these new EM-observations define several new and unique properties of these classical Lipofectamines, and allow them to be discriminated from other lipoidal or particulate transfection-reagents, which we find do not physically break out of endosomes or end up in inclusion bodies, and in fact, provoke absolutely none of these 'signature' cytoplasmic reactions.
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Zhang Z, Zhao Y, Meng X, Zhao D, Zhang D, Wang L, Liu C. A Simple Zn2+ Complex-Based Composite System for Efficient Gene Delivery. PLoS One 2016; 11:e0158766. [PMID: 27433798 PMCID: PMC4951035 DOI: 10.1371/journal.pone.0158766] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2015] [Accepted: 06/21/2016] [Indexed: 11/19/2022] Open
Abstract
Metal complexes might become a new type of promising gene delivery systems because of their low cytotoxicity, structural diversity, controllable aqua- and lipo-solubility, and appropriate density and distribution of positive charges. In this study, Zn2+ complexes (1-10) formed with a series of ligands contained benzimidazole(bzim)were prepared and characterized. They were observed to have different affinities for DNA, dependent on their numbers of positive charges, bzim groups, and coordination structures around Zn2+. The binding induced DNA to condensate into spherical nanoparticles with ~ 50 nm in diameter. The cell transfection efficiency of the DNA nanoparticles was poor, although they were low toxic. The sequential addition of the cell-penetrating peptide (CPP) TAT(48-60) and polyethylene glycol (PEG) resulted in the large DNA condensates (~ 100 nm in diameter) and the increased cellular uptake. The clathrin-mediated endocytosis was found to be a key cellular uptake pathway of the nanoparticles formed with or without TAT(48-60) or/and PEG. The DNA nanoparticles with TAT(48-60) and PEG was found to have the cell transfection efficiency up to 20% of the commercial carrier Lipofect. These results indicated that a simple Zn2+-bzim complex-based composite system can be developed for efficient and low toxic gene delivery through the combination with PEG and CPPs such as TAT.
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Affiliation(s)
- Zhe Zhang
- Key Laboratory of Pesticide and Chemical Biology, Ministry of Education and School of Chemistry, Central China Normal University, Wuhan, 430079, China
| | - Yanjie Zhao
- Key Laboratory of Pesticide and Chemical Biology, Ministry of Education and School of Chemistry, Central China Normal University, Wuhan, 430079, China
| | - Xianggao Meng
- Key Laboratory of Pesticide and Chemical Biology, Ministry of Education and School of Chemistry, Central China Normal University, Wuhan, 430079, China
| | - Dan Zhao
- Key Laboratory of Pesticide and Chemical Biology, Ministry of Education and School of Chemistry, Central China Normal University, Wuhan, 430079, China
| | - Dan Zhang
- Key Laboratory of Pesticide and Chemical Biology, Ministry of Education and School of Chemistry, Central China Normal University, Wuhan, 430079, China
| | - Li Wang
- Key Laboratory of Pesticide and Chemical Biology, Ministry of Education and School of Chemistry, Central China Normal University, Wuhan, 430079, China
- * E-mail: (CL); (LW)
| | - Changlin Liu
- Key Laboratory of Pesticide and Chemical Biology, Ministry of Education and School of Chemistry, Central China Normal University, Wuhan, 430079, China
- * E-mail: (CL); (LW)
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Kumar K, Vulugundam G, Kondaiah P, Bhattacharya S. Co-liposomes of redox-active alkyl-ferrocene modified low MW branched PEI and DOPE for efficacious gene delivery in serum. J Mater Chem B 2015; 3:2318-2330. [DOI: 10.1039/c4tb01771d] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Ferrocenylated lipopolymers based on low molecular weight, branched polyethylenimine (BPEI 800 Da) for redox controlled gene delivery.
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Affiliation(s)
- Krishan Kumar
- Department of Organic Chemistry
- Indian Institute of Science
- Bangalore
- India
| | | | - Paturu Kondaiah
- Department of Molecular Reproduction Development and Genetics
- Indian Institute of Science
- Bangalore
- India
| | - Santanu Bhattacharya
- Department of Organic Chemistry
- Indian Institute of Science
- Bangalore
- India
- Chemical Biology Unit
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Vulugundam G, Kumar K, Kondaiah P, Bhattacharya S. Efficacious redox-responsive gene delivery in serum by ferrocenylated monomeric and dimeric cationic cholesterols. Org Biomol Chem 2015; 13:4310-20. [DOI: 10.1039/c4ob02513j] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Abstract
New redox-active monomeric and dimeric ferrocenylated cationic cholesterols for gene transfection.
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Affiliation(s)
| | - Krishan Kumar
- Department of Organic Chemistry
- Indian Institute of Science
- Bangalore
- India
| | - Paturu Kondaiah
- Department of Molecular Reproduction Development and Genetics
- Indian Institute of Science
- Bangalore
- India
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Green MD, Foster AA, Greco CT, Roy R, Lehr RM, Epps TH, Sullivan MO. Catch and Release: Photocleavable Cationic Diblock Copolymers as a Potential Platform for Nucleic Acid Delivery. Polym Chem 2014; 5:10.1039/C4PY00638K. [PMID: 25090637 PMCID: PMC4115287 DOI: 10.1039/c4py00638k] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
Binding interactions between DNA and cationic carriers must be sufficiently strong to prevent nuclease-mediated degradation, yet weak enough to permit transcription. We demonstrate cationic diblock copolymers containing PEG and o-nitrobenzyl moieties that facilitated tailorable DNA complexation and light-activated release. This design unlocks a new approach to advance non-viral gene packaging.
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Affiliation(s)
- Matthew D. Green
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19716, USA. Fax: +1 302 831 1048; Tel: +1 302 831 8072
| | - Abbygail A. Foster
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19716, USA. Fax: +1 302 831 1048; Tel: +1 302 831 8072
| | - Chad T. Greco
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19716, USA. Fax: +1 302 831 1048; Tel: +1 302 831 8072
| | - Raghunath Roy
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19716, USA. Fax: +1 302 831 1048; Tel: +1 302 831 8072
| | - Rachel M. Lehr
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19716, USA. Fax: +1 302 831 1048; Tel: +1 302 831 8072
| | - Thomas H. Epps
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19716, USA. Fax: +1 302 831 1048; Tel: +1 302 831 8072
| | - Millicent O. Sullivan
- Department of Chemical and Biomolecular Engineering, University of Delaware, Newark, DE 19716, USA. Fax: +1 302 831 1048; Tel: +1 302 831 8072
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Muller JPE, Aytar BS, Kondo Y, Lynn DM, Abbott NL. Influence of the Phase State of Self-Assembling Redox Mediators on their Electrochemical Activity. AIChE J 2014; 60:1381-1392. [PMID: 24882870 DOI: 10.1002/aic.14402] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/23/2022]
Abstract
Self-assembling redox mediators have the potential to be broadly useful in a range of interfacial electrochemical contexts because the oxidation state and state of assembly of the mediator are closely coupled. In this paper, we report an investigation of the self-assembly of single- and double-tailed ferrocenyl amphiphiles (FTMA and BFDMA, respectively) at the surfaces of Pt electrodes and the impact of the dynamic assembled state of the amphiphiles on their rate of oxidation. We conclude that frozen aggregates of BFDMA adsorb to the surfaces of the Pt electrodes, and that slow dynamics of reorganization BFDMA within these aggregates limits the rate of electrooxidation of BFDMA. In contrast, FTMA, while forming assemblies on the surfaces of Pt electrodes, is characterized by fast reorganization dynamics and a corresponding rate of oxidation that is an order of magnitude greater than BFDMA.
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Affiliation(s)
- John P. E. Muller
- Dept. of Chemical and Biological Engineering; University of Wisconsin-Madison; Madison WI 53706
| | - Burcu S. Aytar
- Dept. of Chemical and Biological Engineering; University of Wisconsin-Madison; Madison WI 53706
| | - Yukishige Kondo
- Dept. of Industrial Chemistry; Tokyo University of Science; Tokyo Japan
| | - David M. Lynn
- Dept. of Chemical and Biological Engineering; University of Wisconsin-Madison; Madison WI 53706
| | - Nicholas L. Abbott
- Dept. of Chemical and Biological Engineering; University of Wisconsin-Madison; Madison WI 53706
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Hata S, Takahashi H, Takahashi Y, Kondo Y. Control of Dual Stimuli-Responsive Vesicle Formation in Aqueous Solutions of Single-Tailed Ferrocenyl Surfactant by Varying pH and Redox Conditions. J Oleo Sci 2014; 63:239-48. [DOI: 10.5650/jos.ess13164] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
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Aytar BS, Muller JPE, Kondo Y, Abbott NL, Lynn DM. Spatial control of cell transfection using soluble or solid-phase redox agents and a redox-active ferrocenyl lipid. ACS APPLIED MATERIALS & INTERFACES 2013; 5:8283-8288. [PMID: 23965341 PMCID: PMC3789068 DOI: 10.1021/am402594z] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
We report principles for active, user-defined control over the locations and timing with which DNA is expressed in cells. Our approach exploits unique properties of a ferrocenyl cationic lipid that is inactive when oxidized, but active when chemically reduced. We show that methods that exert spatial control over the administration of reducing agents can lead to local activation of lipoplexes and spatial control over gene expression. The versatility of this approach is demonstrated using both soluble and solid-phase reducing agents. These methods provide control over cell transfection, including methods for remote activation and the patterning of expression using solid-phase redox agents, that are difficult to achieve using conventional lipoplexes.
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Affiliation(s)
- Burcu S Aytar
- Department of Chemical and Biological Engineering, 1415 Engineering Drive, and §Department of Chemistry, 1101 University Avenue, University of Wisconsin-Madison , Madison, Wisconsin 53706, United States
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Aytar BS, Muller JPE, Kondo Y, Talmon Y, Abbott NL, Lynn DM. Redox-based control of the transformation and activation of siRNA complexes in extracellular environments using ferrocenyl lipids. J Am Chem Soc 2013; 135:9111-20. [PMID: 23701636 DOI: 10.1021/ja403546b] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
We report physical characterization and biological evaluation of complexes of small interfering RNA (siRNA) formed using a cationic lipid [bis(11-ferrocenylundecyl)dimethylammonium bromide (BFDMA)] containing redox-active ferrocenyl groups at the end of each hydrophobic tail. We demonstrate that control over the redox state of BFDMA can be used to influence key physical properties and control the activities of lipoplexes formed using siRNA-based constructs. Specifically, lipoplexes of siRNA and reduced BFDMA lead to high levels of sequence-specific gene silencing in cells, but lipoplexes formed using oxidized BFDMA do not. Lipoplexes of oxidized BFDMA can be activated in situ to induce high levels of silencing by addition of a chemical reducing agent, demonstrating a basis for external control over the activation/delivery of siRNA in cellular environments. Differences in activity arise from the inability of oxidized BFDMA to promote efficient internalization of siRNA; these differences also correlated to significant differences in the nanostructures of these lipoplexes (determined by cryo-TEM) and their ζ potentials as a function of oxidation state. These results are considered in view of recent studies characterizing the nanostructures, properties, and behaviors of lipoplexes formed using BFDMA and macromolecular plasmid DNA. We find that several key structural features and aspects of redox control observed for lipoplexes of plasmid DNA are maintained in complexes formed using smaller and more rigid siRNA. The ability to transform BFDMA in complex media presents opportunities to exert control over the nanostructures and behaviors of siRNA lipoplexes in ways not possible using conventional lipids. The approaches reported here could thus prove useful in both fundamental and applied contexts.
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Affiliation(s)
- Burcu S Aytar
- Department of Chemical and Biological Engineering, University of Wisconsin-Madison, Madison, Wisconsin 53706, USA
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Aytar BS, Muller JPE, Golan S, Kondo Y, Talmon Y, Abbott NL, Lynn DM. Chemical oxidation of a redox-active, ferrocene-containing cationic lipid: influence on interactions with DNA and characterization in the context of cell transfection. J Colloid Interface Sci 2012; 387:56-64. [PMID: 22980739 DOI: 10.1016/j.jcis.2012.07.083] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2012] [Revised: 07/22/2012] [Accepted: 07/25/2012] [Indexed: 02/06/2023]
Abstract
We report an approach to the chemical oxidation of a ferrocene-containing cationic lipid [bis(11-ferrocenylundecyl)dimethylammonium bromide, BFDMA] that provides redox-based control over the delivery of DNA to cells. We demonstrate that BFDMA can be oxidized rapidly and quantitatively by treatment with Fe(III)sulfate. This chemical approach, while offering practical advantages compared to electrochemical methods used in past studies, was found to yield BFDMA/DNA lipoplexes that behave differently in the context of cell transfection from lipoplexes formed using electrochemically oxidized BFDMA. Specifically, while lipoplexes of the latter do not transfect cells efficiently, lipoplexes of chemically oxidized BFDMA promoted high levels of transgene expression (similar to levels promoted by reduced BFDMA). Characterization by SANS and cryo-TEM revealed lipoplexes of chemically and electrochemically oxidized BFDMA to both have amorphous nanostructures, but these lipoplexes differed significantly in size and zeta potential. Our results suggest that differences in zeta potential arise from the presence of residual Fe(2+) and Fe(3+) ions in samples of chemically oxidized BFDMA. Addition of the iron chelating agent EDTA to solutions of chemically oxidized BFDMA produced samples functionally similar to electrochemically oxidized BFDMA. These EDTA-treated samples could also be chemically reduced by treatment with ascorbic acid to produce samples of reduced BFDMA that do promote transfection. Our results demonstrate that entirely chemical approaches to oxidation and reduction can be used to achieve redox-based 'on/off' control of cell transfection similar to that achieved using electrochemical methods.
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Affiliation(s)
- Burcu S Aytar
- Department of Chemical and Biological Engineering, University of Wisconsin-Madison, 1415 Engineering Drive, Madison, WI 53706, United States
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Muller JPE, Aytar BS, Kondo Y, Lynn DM, Abbott NL. Incorporation of DOPE into Lipoplexes formed from a Ferrocenyl Lipid leads to Inverse Hexagonal Nanostructures that allow Redox-Based Control of Transfection in High Serum. SOFT MATTER 2012; 8:2608-2619. [PMID: 22707977 PMCID: PMC3374640 DOI: 10.1039/c2sm00047d] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
We report small angle X-ray and neutron scattering measurements that reveal that mixtures of the redox-active lipid bis(11-ferrocenylundecyl)dimethylammonium bromide (BFDMA) and dioleoylphosphatidylethanolamine (DOPE) spontaneously form lipoplexes with DNA that exhibit inverse hexagonal nanostructure (H(II) (c)). In contrast to lipoplexes of DNA and BFDMA only, which exhibit a multilamellar nanostructure (L(α) (c)) and limited ability to transfect cells in the presence of serum proteins, we measured lipoplexes of BFDMA and DOPE with the H(II) (c) nanostructure to survive incubation in serum and to expand significantly the range of media compositions (e.g., up to 80% serum) over which BFDMA can be used to transfect cells with high efficiency. Importantly, we also measured the oxidation state of the ferrocene within the BFDMA/DNA lipoplexes to have a substantial influence on the transfection efficiency of the lipoplexes in media containing serum. Specifically, whereas lipoplexes of reduced BFDMA and DOPE transfect cells with high efficiency, lipoplexes of oxidized BFDMA and DNA lead to low levels of transfection. Complementary measurements using SAXS reveal that the low transfection efficiency of the lipoplexes of oxidized BFDMA and DOPE correlates with the presence of weak Bragg peaks and thus low levels of H(II) (c) nanostructure in solution. Overall, these results provide support for our hypothesis that DOPE-induced formation of the H(II) (c) nanostructure of the BFDMA-containing lipoplexes underlies the high cell transfection efficiency measured in the presence of serum, and that the oxidation state of BFDMA within lipoplexes with DOPE substantially regulates the formation of the H(II) (c) nanostructure and thus the ability of the lipoplexes to transfect cells with DNA. More generally, the results presented in this paper suggest that lipoplexes formed from BFDMA and DOPE may offer the basis of approaches that permit active and external control of transfection of cells in the presence of high (physiologically relevant) levels of serum.
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Affiliation(s)
- John P. E. Muller
- Department of Chemical and Biological Engineering, University of Wisconsin-Madison, 1415 Engineering Drive, Madison, WI 53706, USA
| | - Burcu S. Aytar
- Department of Chemical and Biological Engineering, University of Wisconsin-Madison, 1415 Engineering Drive, Madison, WI 53706, USA
| | - Yukishige Kondo
- Department of Industrial Chemistry, Tokyo University of Science, Tokyo, Japan
| | - David M. Lynn
- Department of Chemical and Biological Engineering, University of Wisconsin-Madison, 1415 Engineering Drive, Madison, WI 53706, USA
| | - Nicholas L. Abbott
- Department of Chemical and Biological Engineering, University of Wisconsin-Madison, 1415 Engineering Drive, Madison, WI 53706, USA
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