Cr(VI) reduction by a potent novel alkaliphilic halotolerant strain Pseudochrobactrum saccharolyticum LY10

Improving key gene expression and di-n-butyl phthalate (DBP) degrading ability in a novel Pseudochrobactrum sp. XF203 by ribosome engineering

Di-n-butyl phthalate (DBP) is one of the important phthalates detected commonly in soils and crops, posing serious threat to human health. Pseudochrobactrum sp. XF203 (XF203), a new strain related with DBP biodegradation, was first identified from a natural habitat lacking human disturbance. Genomic analysis coupled with gene expression comparison assay revealed this strain harbors the key aromatic ring-cleaving gene catE203 (encoding catechol 2,3-dioxygenase/C23O) involved DBP biodegradation. Following intermediates identification and enzymatic analysis also indicated a C23O dependent DBP lysis pathway in XF203. The gene directed ribosome engineering was operated and to generate a desirable mutant strain XF203R with highest catE203 gene expression level and strong DBP degrading ability. The X203R removed DBP in soil jointly by reassembling bacterial community. These results demonstrate a great value of XF203R for the practical DBP bioremediation application, highlighting the important role of the key gene-directed ribosome engineering in mining multi-pollutants degrading bacteria from natural habitats where various functional genes are well conserved.

Anaerobic oxidation of methane coupled to reductive immobilization of hexavalent chromium by "Candidatus Methanoperedens"

The anaerobic oxidation of methane (AOM) carried out by anaerobic methanotrophic archaea (ANME) plays an important role in mitigating methane emissions from aqueous environments and has applications in bioremediation and wastewater treatment. Previous studies showed that AOM could be coupled to chromate reduction. However, the specific responsible microorganisms and the biochemical mechanisms are unclear. Herein, we showed that a consortium dominated by ANME "Candidatus Methanoperedens" was able to couple AOM to the reduction of Cr(VI) to Cr(III) at a stoichiometry close to the theoretical ratio. Quantitative distribution analysis of Cr(III) products suggested Cr(VI) was predominantly reduced via the extracellular respiratory pathways. Further Cr(III)-targeted fluorescent visualization combined with single-cell electron microscopic imaging suggested that Cr(VI) was reduced by "Ca. Methanoperedens" independently. Biochemical mechanism investigation via proteomic analysis showed proteins for nitrate reduction under nitrate-reducing conditions were significantly downregulated in Cr(VI)-reducing incubation. Instead, many multiheme cytochrome c (MHCs) were among the most upregulated proteins during the Cr(VI) reduction process, suggesting MHC-governed pathways for extracellular Cr(VI) reduction. The significant upregulation of a formate-dependent nitrite reductase during Cr(VI) reduction indicated its potential contribution to the small proportion of Cr(VI) reduction inside cells.

"Phylogenomic insights into brucellaceae: The Pseudochrobactrum algeriensis case"

The genus Pseudochrobactrum encompasses free-living bacteria phylogenetically close to Ochrobactrum opportunistic pathogens and to Brucella, facultative intracellular parasites causing brucellosis, a worldwide-extended and grave zoonosis. Recently, Pseudochrobactrum strains were isolated from Brucella natural hosts on Brucella selective media, potentially causing diagnostic confusions. Strikingly, P. algeriensis was isolated from cattle lymph nodes, organs that are inimical to bacteria. Here, we analyse P. algeriensis potential virulence factors in comparison with Ochrobactrum and Brucella. Consistent with genomic analyses, Western-Blot analyses confirmed that P. algeriensis lacks the ability to synthesize the N-formylperosamine O-polysaccharide characteristic of the lipopolysaccharide (LPS) of smooth Brucella core species. However, unlike other Pseudochrobactrum but similar to some early diverging brucellae, P. algeriensis carries genes potentially synthetizing a rhamnose-based O-polysaccharide LPS. Lipid A analysis by MALDI-TOF demonstrated that P. algeriensis LPS bears a lipid A with a reduced pathogen-associated molecular pattern, a trait shared with Ochrobactrum and Brucella that is essential to generate a highly stable outer membrane and to delay immune activation. Also, although not able to multiply intracellularly in macrophages, the analysis of P. algeriensis cell lipid envelope revealed the presence of large amounts of cationic aminolipids, which may account for the extremely high resistance of P. algeriensis to bactericidal peptides and could favor colonization of mucosae and transient survival in Brucella hosts. However, two traits critical in Brucella pathogenicity are either significantly different (T4SS [VirB]) or absent (erythritol catabolic pathway) in P. algeriensis. This work shows that, while diverging in other characteristics, lipidic envelope features relevant in Brucella pathogenicity are conserved in Brucellaceae. The constant presence of these features strongly suggests that reinforcement of the envelope integrity as an adaptive advantage in soil was maintained in Brucella because of the similarity of some environmental challenges, such as the action of cationic peptide antibiotics and host defense peptides. This information adds knowledge about the evolution of Brucellaceae, and also underlines the taxonomical differences of the three genera compared.

A kinetic modelling approach to explore mechanism of Cr(VI) detoxification by a novel strain Pseudochrobactrum saccharolyticum NBRI-CRB 13 using response surface methodology

A novel Pseudochrobactrum saccharolyticum strain NBRI-CRB 13, isolated from tannery sludge, was studied to grow up to 500 mgL-1 of Cr(VI) and showed Cr(VI) detoxification by reducing > 90% of Cr(VI) at different concentrations 25, 50 and 100 mgL-1. Kinetic studies showed that first-order models were fitted (R2 = 0.998) to the time-dependent Cr(VI) reduction with degradation rate constant (k) (1.03-0.429 h-1). Cr(VI) detoxification was primarily related to the extracellular fraction of microbial cells, which showed a maximum extracellular reductase enzyme activity led to 94.6% reduction of Cr(VI). Moreover, the strain showed maximum extracellular polymeric substances (EPS) production at 100 mgL-1 Cr(VI), which is presumably the reason for Cr(VI) removal as EPS serves as the metal binding site for Cr(VI) ions. Further, an optimization study using Box-Behnken design was conducted considering parameters viz., pH, temperature, and initial concentration of Cr(VI). The maximum percent reduction of Cr(VI) was obtained at pH 6.5, temperature 30 °C with 62.5 mgL-1Cr(VI) concentration. Further, the Cr(VI) reduction and adsorption ability of strain P. saccharolyticum NBRI-CRB13 were confirmed by SEM-EDS, FTIR, and XRD analyses. FTIR analysis confirmed the presence of functional groups (-OH, -COOH, -PO4) on bacterial cell walls, which were more likely to interact with positively charged chromium ions. The study elucidated the reduction of Cr(VI) by the novel bacterium within 24 h using the response surface methodology approach and advocated its application in real-time situations.

Growth-dependent cr(VI) reduction by Alteromonas sp. ORB2 under haloalkaline conditions: toxicity, removal mechanism and effect of heavy metals

Bacterial reduction of hexavalent chromium (VI) to chromium (III) is a sustainable bioremediation approach. However, the Cr(VI) containing wastewaters are often characterized with complex conditions such as high salt, alkaline pH and heavy metals which severely impact the growth and Cr(VI) reduction potential of microorganisms. This study investigated Cr(VI) reduction under complex haloalkaline conditions by an Alteromonas sp. ORB2 isolated from aerobic granular sludge cultivated from the seawater-microbiome. Optimum growth of Alteromonas sp. ORB2 was observed under haloalkaline conditions at 3.5-9.5% NaCl and pH 7-11. The bacterial growth in normal culture conditions (3.5% NaCl; pH 7.6) was not inhibited by 100 mg/l Cr(VI)/ As(V)/ Pb(II), 50 mg/l Cu(II) or 5 mg/l Cd(II). Near complete reduction of 100 mg/l Cr(VI) was achieved within 24 h at 3.5-7.5% NaCl and pH 8-11. Cr(VI) reduction by Alteromonas sp. ORB2 was not inhibited by 100 mg/L As(V), 100 mg/L Pb(II), 50 mg/L Cu(II) or 5 mg/L Cd(II). The bacterial cells grew in the medium with 100 mg/l Cr(VI) contained lower esterase activity and higher reactive oxygen species levels indicating toxicity and oxidative stress. In-spite of toxicity, the cells grew and reduced 100 mg/l Cr(VI) completely within 24 h. Cr(VI) removal from the medium was driven by bacterial reduction to Cr(III) which remained in the complex medium. Cr(VI) reduction was strongly linked to aerobic growth of Alteromonas sp. The Cr(VI) reductase activity of cytosolic protein fraction was pronounced by supplementing with NADPH in vitro assays. This study demonstrated a growth-dependent aerobic Cr(VI) reduction by Alteromonas sp. ORB2 under complex haloalkaline conditions akin to wastewaters.

Molasses-based in situ bio-sequestration of Cr(VI) in groundwater under flow condition

The in situ biosequestration of Cr(VI) in groundwater with molasses as the carbon source was studied based on column experiments and model simulation in this study. Compared with biological reduction, molasses-based chemical reduction did not cause significant Cr(VI) removal at molasses concentration as high as 1.14 g L-1. The molasses at a concentration as low as 0.57 g L-1 could support biofilm-based Cr(VI) sequestration under flow conditions and showed better sequestration performances than D-glucose and emulsified vegetable oil (8 g L-1). The existence of molasses (1.14 g L-1) decreased the pH of the effluent from 7.5 to 6.3 and the oxidation-reduction potential from 275 mV to 220 mV in the groundwater, which was responsible for reduction and thus the sequestration of Cr(VI). Advection-dispersion-reaction model well described the process of the Cr(VI) transport with biosequestration in the column (R2 ≥ 0.96). Owing to the Cr(VI) toxicity to the biofilms, the removal ratio decreased by 24% with a rise of Cr(VI) concentration from 8.6 to 43 mg L-1. The prolongation of hydraulic retention time could promote the performance of Cr(VI) biosequestration. The chemical form of Cr deposited as the product of bio-reduction was confirmed as Cr(OH)3·H2O and other complexes of Cr(III). Our work demonstrated the efficacy of molasses for in situ sequestration of Cr(VI) under the dynamic flow condition and provide some useful information for Cr-contaminated groundwater remediation.

A comprehensive review on chromium (Cr) contamination and Cr(VI)-resistant extremophiles in diverse extreme environments

Chromium (Cr) compounds are usually toxins and exist abundantly in two different forms, Cr(VI) and Cr(III), in nature. Their contamination in any environment is a major problem. Many extreme environments including cold climate, warm climate, acidic environment, basic/alkaline environment, hypersaline environment, radiation, drought, high pressure, and anaerobic conditions have accumulated elevated Cr contamination. These harsh physicochemical conditions associated with Cr(VI) contamination damage biological systems in various ways. However, several unique microorganisms belonging to phylogenetically distant taxa (bacteria, fungi, and microalgae) owing to different and very distinct physiological characteristics can withstand extremities of Cr(VI) in different physicochemical environments. These challenging situations offer great potential and extended proficiencies in extremophiles for environmental and biotechnological applications. On these issues, the present review draws attention to Cr(VI) contamination from diverse extreme environmental regions. The study gives a detailed account on the ecology and biogeography of Cr(VI)-resistant microorganisms in inhospitable environments, and their use for detoxifying Cr(VI) and other applications. The study also focuses on physiological, multi-omics, and genetic engineering approaches of Cr(VI)-resistant extremophiles.

One-step removal of hexavalent chromium in wide pH range using thiourea dioxide: the role of reactive species

One-step removal of hexavalent chromium in a wide pH range is of great significance. In this paper, a single thiourea dioxide (TD) and two-components thiourea dioxide/ethanolamine (MEA) were used as a green reducing agent for the efficient removal of Cr(vi), respectively. The reduction of Cr(vi) and the precipitation of Cr(iii) were carried out simultaneously under this reaction system. The experimental results proved that TD was activated by amine exchange reaction with MEA. In other words, MEA promoted the generation of an active isomeride of TD by changing the equilibrium position of the reversible reaction. After adding MEA, the removal rate of Cr(vi) and total Cr could reach industrial water discharge standards in a wide pH range of 8-12. The change of pH, reduction potential and the decomposition rate of TD were investigated in the reaction processes. Meanwhile, reductive and oxidative reactive species were produced simultaneously during this reaction process. Further, oxidative reactive species (O₂˙^- and ¹O₂) were beneficial for the decomplexation of Cr(iii) complexes and the formation of Cr(iii) precipitation. The experimental results also demonstrated that TD/MEA was effective in practical industrial wastewater. Hence this reaction system has a significant industrial application prospect.

Bioreduction mechanisms of high-concentration hexavalent chromium using sulfur salts by photosynthetic bacteria

Eliminating "sulfur starvation" caused by competition for sulfate transporters between chromate and sulfate is crucial to enhance the content of sulfur-containing compounds and improve the tolerance and reduction capability of Cr(VI) in bacteria. In this study, the effects of sulfur salts on the Cr(VI) bioremediation and the possible mechanism were investigated in Rhodobacter sphaeroides SC01 by cell imaging, spectroscopy, and biochemical measurements. The results showed that, when the concentration of metabisulfite was 2.0 g L^-1, and the initial OD₆₀₀ was 0.33, the reduction rate of R. sphaeroides SC01 reached up to 91.3% for 500 mg L^-1 Cr(VI) exposure at 96 h. Moreover, thiosulfate and sulfite also markedly increased the concentration of reduced Cr(VI) in R. sphaeroides SC01. Furthermore, the characterization results revealed that -OH, -CONH, -COOH, -SO₃, -PO₃, and -S-S- played a major role in the adsorption of Cr, and Cr(III) reduced by bacteria was bioprecipitated in the production of Cr₂P₃S₉ and CrPS₄. In addition, R. sphaeroids SC01 combined with metabisulfite significantly increased the activity of glutathione peroxidase and the content of glutathione (GSH) and total sulfhydryl while decreasing reactive oxygen species (ROS) accumulation and cell death induced by Cr(VI) toxic. Overall, the results of this research revealed a highly efficient and reliable strategy for Cr(VI) removal by photosynthetic bacteria combined with sulfur salts in high-concentration Cr(VI)-contaminated wastewater.

Microbial Remediation: A Promising Tool for Reclamation of Contaminated Sites with Special Emphasis on Heavy Metal and Pesticide Pollution: A Review

Heavy metal and pesticide pollution have become an inevitable part of the modern industrialized environment that find their way into all ecosystems. Because of their persistent nature, recalcitrance, high toxicity and biological enrichment, metal and pesticide pollution has threatened the stability of the environment as well as the health of living beings. Due to the environmental persistence of heavy metals and pesticides, they get accumulated in the environs and consequently lead to food chain contamination. Therefore, remediation of heavy metals and pesticide contaminations needs to be addressed as a high priority. Various physico-chemical approaches have been employed for this purpose, but they have significant drawbacks such as high expenses, high labor, alteration in soil properties, disruption of native soil microflora and generation of toxic by-products. Researchers worldwide are focusing on bioremediation strategies to overcome this multifaceted problem, i.e., the removal, immobilization and detoxification of pesticides and heavy metals, in the most efficient and cost-effective ways. For a period of millions of evolutionary years, microorganisms have become resistant to intoxicants and have developed the capability to remediate heavy metal ions and pesticides, and as a result, they have helped in the restoration of the natural state of degraded environs with long term environmental benefits. Keeping in view the environmental and health concerns imposed by heavy metals and pesticides in our society, we aimed to present a generalized picture of the bioremediation capacity of microorganisms. We explore the use of bacteria, fungi, algae and genetically engineered microbes for the remediation of both metals and pesticides. This review summarizes the major detoxification pathways and bioremediation technologies; in addition to that, a brief account is given of molecular approaches such as systemic biology, gene editing and omics that have enhanced the bioremediation process and widened its microbiological techniques toward the remediation of heavy metals and pesticides.

Role of extracellular polymeric substances in the immobilization of hexavalent chromium by Shewanella putrefaciens CN32 unsaturated biofilms

Microbial remediation provides a promising avenue for the management and restoration of heavy metal-contaminated soils. Microorganisms in soils usually exist within unsaturated biofilms, however, their response to heavy metals is still limited compared to saturated biofilms. This work investigated the Cr(VI) immobilization by Shewanella putrefaciens CN32 unsaturated biofilms, and explored the underlying mechanisms of Cr(VI) complexation. Results reveal a dose-dependent toxicity of Cr(VI) to the growth of the unsaturated biofilms. During the early growth stage, the Cr(VI) addition stimulated more extracellular polymeric substances (EPS) production. In the meantime, the EPS were demonstrated to be the primary components for Cr(VI) immobilization, which accounted for more than 60% of the total adsorbed Cr(VI). The Fourier transform infrared spectra and X-ray photoelectron spectra corroborated that the binding sites for immobilizing Cr(VI) were hydroxyl, carboxyl, phosphoryl and amino functional groups of the proteins and polysaccharides in EPS. However, for the starved unsaturated biofilms, EPS were depleted and the EPS-bound Cr(VI) were released, which caused approximately 60% of the adsorbed Cr(VI) onto cell components and further aggravated the Cr(VI) stress to cells. This work extends our understanding about the Cr(VI) immobilization by unsaturated biofilms, and provides useful information for remediation of heavy metal-contaminated soils.

Bioreduction of hexavalent chromium by a novel haloalkaliphilic Salipaludibacillus agaradhaerens strain NRC-R isolated from hypersaline soda lakes

A novel Cr(VI)-resistant haloalkaliphilic bacterial strain NRC-R, identified as Salipaludibacillus agaradhaerens, was isolated from hypersaline soda lakes and characterized for its Cr(VI) bioreduction efficiency. Strain NRC-R grew well and effectively reduced Cr(VI) under a wide range of sodium chloride, pH, shaking velocity and temperature, showing maximum Cr(VI) reduction at 8% NaCl, pH 10, 150 rpm and 35 °C, respectively. Strain NRC-R was able to grow and reduce Cr(VI) effectively in the presence of different heavy metals and oxyanions (Pb²⁺, Zn²⁺, Co²⁺, Mn²⁺, Ni²⁺, Mo²⁺, HPO₄ ^-, NO₃ ^-, SO₄ ^2- and HCO₃ ^-). Furthermore, Fe³⁺ and Cu²⁺ significantly enhanced the Cr(VI) removal by about 1.5 fold. Strain NRC-R could reduce Cr(VI) using a variety of electron donors, exhibiting a maximum reduction in the presence of NADH and fructose. The bioremoval of Cr(VI) using strain NRC-R was due to direct enzymatic reduction and the chromate reductase activity was mainly detected in the bacterial cell membrane. Under the optimized conditions, strain NRC-R showed a remarkable Cr(VI) bioreduction with highest reduction rate of 240 uM/h. Cr(VI) concentrations of up to 3 mM (888.5 mg/L) and 4 mM (1177 mg/L) were completely reduced within 16 h and 32 h, respectively. TEM and SEM-EDX analyses confirmed the biosorption of chromium species into the cells. To the best of our knowledge, this is the first report about Cr(VI) reduction by S. agaradhaerens. In conclusion, S. agaradhaerens NRC-R was a highly efficient Cr(VI) reducing haloalkaliphilic bacterium that has a significant potential in the bioremediation of Cr(VI)-contaminated environments.

SUPPLEMENTARY INFORMATION

The online version contains supplementary material available at 10.1007/s13205-021-03082-2.

Application of microbial immobilization technology for remediation of Cr(VI) contamination: A review

The discharge of chromium (Cr) contaminated wastewater is creating a serious threat to aquatic environment due to the rapid pace in agricultural and industrial activities. Particularly, the long-term exposure of Cr(VI) polluted wastewater to the environment is causing serious harm to human health. Therefore, the treatment of Cr(VI) contaminated wastewater is demanding widespread attention. Regarding this, the bioremediation is being considered as a reliable and feasible option to handle Cr(VI) contaminated wastewater because of having low technical investment and operating costs. However, certain factors such as loss of microorganisms, toxicity to microorganisms and uneven microbial growth cycle in the presence of high concentrations of Cr(VI) are hindering its commercial applications. Regarding this, microbial immobilization technology (MIT) is getting great research interest because it could overcome the shortcomings of bioremediation technology's poor tolerance against Cr. Therefore, this review is the first attempt to emphases recent research developments in the remediation of Cr(VI) contamination via MIT. Starting from the selection of immobilized carrier, the present review is designed to critically discuss the various microbial immobilizing methods i.e., adsorption, embedding, covalent binding and medium interception. Further, the mechanism of Cr(VI) removal by immobilized microorganism has also been explored, precisely. In addition, three kinds of microorganism immobilization devices have been critically examined. Finally, knowledge gaps/key challenges and future perspectives are also discussed that would be helpful for the experts in improving MIT for the remediation of Cr(VI) contamination.

Highly efficient and sustainable removal of Cr (VI) in aqueous solutions by photosynthetic bacteria supplemented with phosphor salts

Photosynthetic bacteria have flexible metabolisms and strong environmental adaptability, and require cheap, but plentiful, energy supplements, which all enable their use in Cr(VI)-remediation. In this study, the effects of culture conditions on the total Cr removal rate were investigated for a newly identified strain of Rhodobacter sphaeroides SC01. The subcellular distribution and Cr(VI) reduction ability of four different cellular fractions were evaluated by scanning electron microscopy and transmission electron microscopy. Experiments indicated that the optimal culture conditions for total Cr removal included a culture temperature of 35 °C, pH of 7.20, an NaCl concentration of 5 g L^-1, a light intensity of 4000 lx, and an initial cell concentration (OD₆₈₀) of 0.15. In addition, most Cr was found in the cell membrane in the form of Cr (III) after reduction, while cell membranes had the highest Cr(VI) reduction rate (99%) compared to other cellular components. In addition, the physical and chemical properties of SC01 cells were characterized by FTIR, XPS, and XRD analyses, confirming that Cr was successfully absorbed on bacterial cell surfaces. CrPO₄‧6H₂O and Cr₅(P₃O₁₀)₃ precipitates were particularly identified by XRD analysis. After screening supplementation with five phosphor salts, Cr(VI) reduction due to bioprecipitation was improved by the addition of Na₄P₂O₇ and (NaPO₃)₆ salts, with the Cr(VI)-reduction rate combined with Na₄P₂O₇ addition being 15% higher than that of the control. Thus, this study proposes a new Cr(VI)-removal strategy based on the combined use of photosynthetic bacteria and phosphor salts, which importantly increases its potential application in treating wastewater.

Performance and enhancement mechanism of corncob guiding chromium (VI) bioreduction

Chromium-contaminated groundwater has drawn extensive attention due to its high toxicity and wide application. Although bioremediation is considered to be an effective approach for Cr(VI) removal, a better method is still urgently needed. In this study, corncob-guided Cr(VI) reduction achieved the highest removal efficiency due to the highest amount of total carbon and available carbon emissions. After verifying the sustainability and operational feasibility of this approach, the broad-spectrum applicability of corncob to guide Cr(VI) bioreduction was further explored under various operating conditions. In addition, it suggested that the carrier effect, nutrient element release and electron shuttle effect were the main mechanisms enhancing the reduction process, with approximate contribution rates of 12.5%, 7.5% and 75%, respectively. Microbiological analysis demonstrated that the addition of solid-phase carbon sources increased the abundance of microbes related to carbon metabolism and promoted the expression of glycolytic metabolic pathway. Furthermore, the addition of corncob led to an elevation of expression level of the electron transport pathway, which is consistent with the function of the electron shuttle. This study provides theoretical and technical support for the practical application of corncob-mediated Cr(VI) bioreduction.

Practical application potential of microbial-phosphorus minerals-alginate immobilized particles on chromium(VI)-bioreduction

Due to the widespread use of chromium (Cr) across various industrial processes, the process of in-situ remediation of Cr-contaminated groundwater has received extensive attention. Previous studies of solid-phase phosphorus sources and microbial immobilization co-strengthening materials have demonstrated that their performance in continuous flow reactions is of great significance towards practical application of these technologies. It was suggested that Microbial-Phosphorus minerals-Alginate (MPA) immobilized particles showed superior performance (high Cr removal efficiency, low phosphorus surplus, and high environmental resistance) in comparisons of non-immobilization systems and different immobilization methods under continuous flow conditions. Microbial community analysis revealed significant differences between different systems as well as between variations in environmental factors, providing further support for the above conclusions. Synthetic wastewater (synthesized by actual groundwater) was also introduced to further verify the practical application potential of MPA immobilized particles. The results of this study provide a new insight and relevant bench scale data to support the enhancement of in-situ Cr(VI) bioremediation.

Removal performance and mechanism of poly(N1,N1,N3,N3-tetraallylpropane-1,3-diaminium chloride) toward Cr(VI)

The adsorption characteristic and mechanism of poly(N¹,N¹,N³,N³-tetraallylpropane-1,3-diaminium chloride) (PTAPDAC) toward Cr(VI) ions were systematically investigated. Results showed that the removal efficiency of PTAPDAC toward Cr(VI) could reach above 98% at pH = 3-6. The equilibrium data of Cr(VI) adsorbed by PTAPDAC fitted the Langmuir model well, and the maximum sorption capacity deduced from the Langmuir model at 293 K was 273.17 mg g^-1. The adsorption of PTAPDAC toward Cr(VI) was rapid and reached equilibrium within 60 min, and the adsorption kinetic process was relevant to the pseudo-second-order kinetic model. Moreover, the activation energy E _a was calculated as -22.505 kJ mol^-1. The adsorption processes were spontaneous and exothermic driven by an increase in entropy, which involved electrostatic attraction, ion exchange, and redox reactions. The X-ray photoelectron spectroscopy analysis revealed that approximately 64.5% of Cr(VI) reduced to be Cr(III), and 24.29% of -C-NH⁺ deprotonated. The combination of reduced Cr(III) with tertiary amine groups resulted in a positively charged tertiary amine group, which further promoted Cr(VI) adsorption, thereby increasing the adsorption capacity of PTAPDAC toward Cr(VI). Therefore, PTAPDAC has a broad application prospect in removing Cr(VI) ions in wastewater.

Cr(VI) removal by Penicillium oxalicum SL2: Reduction with acidic metabolites and form transformation in the mycelium

Bioremediation of Cr(VI) contamination using microorganisms is a promising method for reducing its environmental risks. The objective of this study was to clarify Cr(VI) removal by Penicillium oxalicum SL2 in terms of indirect Cr(VI) reduction by metabolites, interaction sites, and form transformation of chromium. Strain SL2 could sequentially remove Cr(VI) in the bioreactor. Oxalic acid produced by the fungus contributed to Cr(VI) reduction. Scanning transmissiony X-ray microscop (STXM) analysis suggested strain SL2 could partly reduce Cr(VI) to Cr(III) in the cell. Amine, carboxyl, and phosphate groups were related to Cr(VI) removal. Chromium K-edge X-ray absorption near edge structure (XANES) analysis implied Cr(III)-Cys potentially acted as an intermediate for the formation of chromium oxalate complexes during the process of treatment. This study would support the application of strain SL2 in Cr(VI) bioremediation and expand knowledge on the interaction of chromium with fungus.

Coupling enhancement of Chromium(VI) bioreduction in groundwater by phosphorus minerals

Groundwater contaminated by hexavalent chromium (Cr(VI)) has posed severe threat to the environment and public health. Although heterotrophic bioremediation has been known as an efficient approach, little is explored on mineral nutrient source addition such as phosphorus minerals. In this study, the stabilization and sustainability of phosphorus minerals for providing phosphorus has been investigated, and the enhancement of Cr(VI) removal by mixed bacterial consortium coupled with phosphorus minerals was also observed and further verified, with 1.4-3.9 times K values (first-order) increase under different conditions. We demonstrated that the applied of phosphorus minerals facilitated the reduction of Cr(VI) and the removal of Cr(III), promoted the resistance of Cr(VI) and the generation of antioxidase, and engendered the evolution of microbial community structures and functional genes. These findings provide a new insight for enhancement of Cr(VI)-contaminated groundwater in-situ remediation.

Enhancement of Chromium (VI) Reduction in Microcosms Amended with Lactate or Yeast Extract: A Laboratory-Scale Study

A laboratory-scale study was carried out to evaluate the groundwater bioremediation potential of hexavalent chromium (Cr(VI)), taking into account the chromate pollution of an industrial site located in Southern Italy (Apulia Region). The reduction of Cr(VI) was studied on laboratory microcosms, set up in different experimental conditions, namely: ABIO (soil and water sterilized), BIO (soil and water not sterilized), LATT (with the addition of lactate), and YE (with the addition of yeast extract). Control test lines, set up by using sterilized matrices and amendments, were employed to assess the occurrence of the pollutant reduction via chemical processes. By combining molecular (microbial abundance, specific chromate reductase genes (ChR) and the Shewanella oinedensis bacterial strain) with chemical analyses of chromium (VI and III) in the matrices (water and soil) of each microcosm, it was possible to investigate the response of microbial populations to different experimental conditions, and therefore, to assess their bioremediation capability in promoting Cr(VI) reduction. The overall results achieved within this work evidenced the key role of amendments (lactate and yeast extract) in enhancing the biological reduction of hexavalent chromium in the contaminated aqueous phase of laboratory microcosms. The highest value of Cr(VI) removal (99.47%) was obtained in the YE amended microcosms at seven days.

Ca2+ and SO42- accelerate the reduction of Cr(VI) by Penicillium oxalicum SL2

Some ions in soils may affect the growth and metabolism of microorganisms and subsequently alter the remediation efficiency of Cr(VI). Here, the effects of different Ca²⁺ and SO₄^2- levels on the reduction of Cr(VI) by Penicillium oxalicum SL2 were investigated. The results showed that Cr(VI) reduction by P. oxalicum SL2 in potato dextrose liquid (PDL) medium was accelerated by the presence of exogenous Ca²⁺ and SO₄^2-. The Cr(VI) reduction rates were increased by 52.5% (200 mg L^-1 Ca²⁺ treated) and 55.9% (2000 mg L^-1 SO₄^2- treated), respectively. High concentration of Ca²⁺ in medium resulted in the production of calcium oxalate crystals, which was contributed to the adsorption of chromium. In addition, X-ray absorption near-edge spectroscopy (XANES) analysis showed that P. oxalicum SL2 could reduce the toxicity of Cr(VI) by synthesizing cysteine (Cys) and reduced glutathione (GSH). The decrease of thiol compounds (Cys and GSH) in P. oxalicum SL2 mycelia treated with SO₄^2- proved the alleviation of oxidative stress. In conclusion, exogenous Ca²⁺ could reduce the damage of Cr(VI) to P. oxalicum SL2 by maintaining the integrity of cell wall, and the addition of SO₄^2- alleviated the Cr(VI) toxicity to P. oxalicum SL2, thus accelerating the reduction of Cr(VI).

Feasibility and mechanism of microbial-phosphorus minerals-alginate immobilized particles in bioreduction of hexavalent chromium and synchronous removal of trivalent chromium

Chromium(VI) contaminated groundwater has become an increasingly prominent problem due to its extensive application in industry. Based on the easy-loss defect of microbial in practical application and previous research on the coupling enhancement of Cr(VI) bioreduction by phosphorus minerals, Microbial-Phosphorus minerals-Alginate (MPA) immobilized particles were proposed and investigated in this study. The feasibility of MPA immobilized particles were proved, with the higher reduction efficiency, lower phosphorus surplus, significant 94% of total Cr reduction and 85% of intragranular fixation. These superiorities were also obtained at different pH and initial Cr(VI) concentration conditions. Furthermore, the mechanisms of the enhancement of MPA were investigated from microbial level (microbial biomass, antioxidase, gene expression and microbial community analysis) and physics level (adsorption kinetic and isotherm), where the speculation that the reduction mainly took place outside the particles was proposed. This research provides a new approach for the practical application of Cr(VI)-contaminated groundwater in-situ bioremediation.

Exploration on the bioreduction mechanism of Cr(Ⅵ) by a gram-positive bacterium: Pseudochrobactrum saccharolyticum W1

Bioremediation of chromium (Cr(Ⅵ)) contaminations has been widely reported, but the research on its removal mechanism is still scarce. Studies on Cr(Ⅵ) removal by strains affiliated to genus Pseudochobactrum revealed the Cr(Ⅵ) efficiency removal through the reduction of Cr(Ⅵ) to Cr(Ⅲ). However, the location of Cr(Ⅵ) reduction reaction and exact mechanism are still unspecified. In this work, a Gram-positive bacterial strain, Pseudochrobactrum saccharolyticum W1 (P. saccharolyticum W1) was isolated and tested to remove approximately 53.7% of Cr(Ⅵ) (initial concentration was 200 mg L^-1) from the MSM medium. Analysis of SEM-EDS and TEM-EDS indicated that chromium-containing particles precipitated both on the cell surface and in the cytoplasm. Batch experiments indicated that the heat-treated bacterial cells almost had no ability to remove Cr(Ⅵ) from solution, while the resting cells could remove 62.0% of Cr(Ⅵ) at the initial concentration of 10 mg L^-1. Additionally, at this concentration, 64.8% and 70.8% of Cr(Ⅵ) was reduced by cell envelope components and intracellular soluble substances after 6 h, respectively. These results suggested that the removal of Cr(Ⅵ) by P. saccharolyticum W1 was through direct reduction, which occurred on both cell envelop and cytoplasm. The results also showed that cytoplasm was the main site for Cr(Ⅵ) reduction compared to the cell envelop. Further analysis of FTIR and XPS verified that C-H, C-C, CO, C-OH and C-O-C groups of cells involved in correlation with chromium during Cr(Ⅵ) reduction. The study offered an insight into the Cr(VI) reduction mechanism of P. saccharolyticum W1.

Reduction of hexavalent chromium (VI) by indigenous alkaliphilic and halotolerant Microbacterium sp. M5: comparative studies under growth and nongrowth conditions

AIMS

To evaluate hexavalent chromium (Cr (VI)) reduction potential of indigenous isolate M5, under growing and nongrowing conditions.

METHODS AND RESULTS

Microbacterium sp. M5 was isolated from soil samples collected from a common effluent treatment plant, after enrichment of indigenous microbial diversity in the presence of 200 mg l^-1 of Cr (VI). The isolate achieved complete reduction of 400 mg l^-1 Cr (VI) supplement to Luria Bertani medium having initial pH of 9·0 after 48 h incubation. Furthermore, the reduction potential of resting and surfactant treated cell membrane compromised cells of M5 was evaluated. The control and biosurfactant treated cells achieved 22·71 ± 0·5% and 40·56 ± 0·5% reduction of 50 mg l^-1 Cr (VI) in Tris-HCl buffer, under resting cells conditions. To the best of our knowledge, this is the first report where cells with compromised cell membrane obtained after exposure to biosurfactant have been evaluated for Cr (VI) reduction.

CONCLUSION

The Cr (VI) reduction potential of Microbacterium sp. M5 could be effectively exploited for treatment of chromium-rich effluents, under nongrowing conditions.

SIGNIFICANCE AND IMPACT OF THE STUDY

The isolate M5 could be a potential inoculum for effluent treatment plants as it is able to support Cr (VI) reduction under wide range of pH, salinity and in the presence of different metal ions.

Cr(VI) reduction by an extracellular polymeric substance (EPS) produced from a strain of Pseudochrobactrum saccharolyticum

A better understanding of the Cr(VI) reduction position and mechanisms by a Cr(VI)-reducing strain is important for the bioremediation of Cr pollution in the environment. In the present study, we were interested in figuring out the role of extracellular polymeric substances (EPS) as the main area for Cr(VI) reduction in the newly reported strain of Pseudochrobactrum saccharolyticum LY10. We investigated the subcellular distribution and reduction capability of each cellular component as the main area of Cr(VI) reduction by scanning electron microscopy and soft X-ray spectromicroscopy. The results suggested that most of Cr was presented in the supernatants as Cr(III) after reduction. In the cells, Cr was mostly distributed in the EPS and cell wall, while the EPS had the maximum Cr(VI) reduction rate (81.5%) as compared with the cell wall (30.1%). Soft X-ray spectromicroscopy analysis indicated that Cr accumulated more in the EPS. Therefore, the results suggested that the EPS were the main area for Cr(VI) reduction in the bacteria of P. saccharolyticum LY10.

Both cell envelope and cytoplasm were the locations for chromium(VI) reduction by Bacillus sp. M6

Biotreatment is an effective way in remediation of chromium(VI) (Cr(VI)) contamination, but its mechanism and reaction sites are still not clear. Herein, Bacillus sp. M6 was used as a model bacterium in this study to investigate the removal mechanism of Cr(VI) in solution. The results showed that the removal of Cr(VI) was attributed to direct reduction by Bacillus sp. M6, and the reduction locations occurred both on the cell envelope and in the cytoplasm. Meanwhile, bioanalysis of Bacillus sp. M6 by SEM-EDS and TEM-EDS, indicated that Cr(III)-containing precipitates distributed both on the surface and in the cytoplasm of Bacillus sp. In addition, XPS analysis demonstrated that the chromium could be bound to cells by coordination with functional groups (C-based and O-based) on the bacterial surface. This work offers a new and deep insight into the mechanism of Cr(VI) reduction by Bacillus sp.

Intracellular versus extracellular accumulation of Hexavalent chromium reduction products by Geobacter sulfurreducens PCA

Hexavalent chromium (Cr(VI)) reduction by Geobacter sulfurreducens PCA was evaluated in batch experiments, and the form and amounts of intracellular and extra-cellular Cr(VI) reduction products were determined over time. The first-order Cr(VI) reduction rate per unit mass of cells was consistent for different initial cell concentrations, and approximately equal to (2.065 ± 0.389) x 10^-9 mL CFU^-1 h^-1. A portion of the reduced Cr(VI) products precipitated on Geobacter cell walls as Cr(III) and was bound via carboxylate functional groups, a portion accumulated inside Geobacter cells, and another portion existed as soluble Cr(III) or organo-Cr(III) released to solution. A mass balance analysis of total chromium in aqueous media, on cell walls, and inside cells was determined as a function of time, and with different initial cell concentrations. Mass balances were between 92% and 98%, and indicated Cr(VI) reduction products accumulate more on cell walls and inside cells with time and with increasing initial cell concentration, as opposed to particulates in aqueous solution. Reduced Cr(VI) products both in solution and on cell surfaces appear to form organo-Cr(III) complexes, and our results suggest that such complexes are more stable to reoxidation than aqueous Cr(III) or Cr(OH)₃. Chromium inside cells is also likely more stable to reoxidation, both because it can form organic complexes, and it is separated by the cell membrane from solution conditions. Hence, Cr(VI) reduction products in groundwater during bioremediation may become more stable against re-oxidation, and may pose a lower risk to human health, over time and with greater initial biomass densities.

Biological approaches to tackle heavy metal pollution: A survey of literature

Pollution by heavy metals has been identified as a global threat since the inception of industrial revolution. Heavy metal contamination induces serious health and environmental hazards due to its toxic nature. Remediation of heavy metals by conventional methods is uneconomical and generates a large quantity of secondary wastes. On the other hand, biological agents such as plants, microorganisms etc. offer easy and eco-friendly ways for metal removal; hence, considered as efficient and alternative tools for metal removal. Bioremediation involves adsorption, reduction or removal of contaminants from the environment through biological resources (both microorganisms and plants). The heavy metal remediation properties of microorganisms stem from their self defense mechanisms such as enzyme secretion, cellular morphological changes etc. These defence mechanisms comprise the active involvement of microbial enzymes such as oxidoreductases, oxygenases etc, which influence the rates of bioremediation. Further, immobilization techniques are improving the practice at industrial scales. This article summarizes the various strategies inherent in the biological sorption and remediation of heavy metals.

Characterization of Penicillium oxalicum SL2 isolated from indoor air and its application to the removal of hexavalent chromium

Removal of toxic Cr(VI) by microbial reduction is a promising approach to reducing its ecotoxicological impact. To develop bioremediation technologies, many studies have evaluated the application of microorganisms isolated from Cr(VI)-contaminated sites. Nonetheless, little attention has been given to microbes from the environments without a history of Cr(VI) contamination. In this study, we aimed to characterize the Cr(VI) tolerance and removal abilities of a filamentous fungus strain, SL2, isolated from indoor air. Based on phenotypic characterization and rDNA sequence analysis, SL2 was identified as Penicillium oxalicum, a species that has not been extensively studied regarding Cr(VI) tolerance and reduction abilities. SL2 showed high tolerance to Cr(VI) on solid and in liquid media, facilitating its application to Cr(VI)-contaminated environments. Growth curves of SL2 in the presence of 0, 100, 400, or 1000 mg/L Cr(VI) were well simulated by the modified Gompertz model. The relative maximal colony diameter and maximal growth rate decreased as Cr(VI) concentration increased, while the lag time increased. SL2 manifested remarkable efficacy of removing Cr(VI). Mass balance analysis indicated that SL2 removed Cr(VI) by reduction, and incorporated 0.79 mg of Cr per gram of dry biomass. In electroplating wastewater, the initial rate of Cr(VI) removal was affected by the initial contaminant concentration. In conclusion, P. oxalicum SL2 represents a promising new candidate for Cr(VI) removal. Our results significantly expand the knowledge on potential application of this microorganism.

Acetate biostimulation as an effective treatment for cleaning up alkaline soil highly contaminated with Cr(VI)

Stimulation of microbial reduction of Cr(VI) to the less toxic and less soluble Cr(III) through electron donor addition has been regarded as a promising approach for the remediation of chromium-contaminated soil and groundwater sites. However, each site presents different challenges; local physicochemical characteristics and indigenous microbial communities influence the effectiveness of the biostimulation processes. Here, we show microcosm assays stimulation of microbial reduction of Cr(VI) in highly alkaline and saline soil samples from a long-term contaminated site in Guanajuato, Mexico. Acetate was effective promoting anaerobic microbial reduction of 15 mM of Cr(VI) in 25 days accompanied by an increase in pH from 9 to 10. Our analyses showed the presence of Halomonas, Herbaspirillum, Nesterenkonia/Arthrobacter, and Bacillus species in the soil sample collected. Moreover, from biostimulated soil samples, it was possible to isolate Halomonas spp. strains able to grow at 32 mM of Cr(VI). Additionally, we found that polluted groundwater has bacterial species different to those found in soil samples with the ability to resist and reduce chromate using acetate and yeast extract as electron donors.

Evaluation of Cr(VI) reduction mechanism and removal by Cellulosimicrobium funkei strain AR8, a novel haloalkaliphilic bacterium

The present study, a novel haloalkaliphilic Cr(VI) tolerant bacterial strain, Cellulosimicrobium funkei AR8, was isolated and characterized for its high Cr(VI) reduction. In batch experiments, Cr(VI) reduction was evaluated under different parametric conditions which include different pH (5-9), temperature (25-45°C), NaCl (0-3%) and Cr(VI) concentrations (100-250μg/ml). Variations in the cell surface functional groups and morphology of the bacterial cells after Cr(VI) reduction were characterized by FT-IR and SEM-EDX. FT-IR analysis revealed that cell surface functional groups such as alkanes, amide and amines are involved in chromium biosorption and SEM-EDX results showed that biosorption and immobilization of chromium species on the cell surface. Bioconversion of Cr(VI) into Cr(III) by strain AR8 was confirmed by XRD and Raman spectroscopy analysis. Intracellular localization of reduced product (Cr(III)) was visualized by TEM analysis. Various instrumentation analysis verified that Cr(VI) removal mechanism of C. funkei AR8 strain was achieved by both extra and intracellular reducing machinery. Toxicity study revealed that the bacterially reduced product exerted less toxic effects on phenotypic, survival (91.31%), hatching (84.04%) and heart function (115±1.03 beats/min) of zebrafish (Danio rerio) embryos. Higher Cr(VI) reducing ability of the strain under haloalkaliphilic condition suggests the C. funkei AR8 as a novel and efficient strain for remediating Cr(VI) contaminated industrial effluents with high salinity and alkalinity.

Characterization of Product and Potential Mechanism of Cr(VI) Reduction by Anaerobic Activated Sludge in a Sequencing Batch Reactor

Bioremediation of Cr(VI) and nitrate is considered as a promising and cost-effective alternative to chemical and physical methods. However, organo-Cr(III) complexes in effluent generally causes environmental concerns due to second-pollution. Here, Cr(VI) reduction and immobilization efficiencies of anaerobic activated sludge were investigated. Anaerobic activated sludge showed strong reduction ability of Cr(VI) and possessed a great potential of Cr(III) immobilization. Almost 100.0 mg l⁻¹ Cr(VI) could be completely reduced and immobilized by anaerobic activated sludge in a sequencing batch reactor in 24 h. And most generated Cr(III) was accumulated outside of sludge cells. Extracellular polymeric substances (EPS) could bind to Cr(VI) and form EPS-Cr(VI) interaction to reduce the toxic effect of Cr(VI) and promote the Cr(VI) reduction. Protein-like and humic-like substances were responsible for binding with Cr(VI), meanwhile the process was a thermodynamically favorable binding reaction. Then Cr(VI) was reduced to Cr(III) by membrane-associated chromate reductase of sludge. Eventually, the generated Cr(III) might exist as poly-nuclear Cr(III) complexes adhered to sludge surfaces.

Improvement of biological nitrogen removal with nitrate-dependent Fe(II) oxidation bacterium Aquabacterium parvum B6 in an up-flow bioreactor for wastewater treatment

Aquabacterium parvum strain B6 exhibited efficient nitrate-dependent Fe(II) oxidation ability using nitrate as an electron acceptor. A continuous up-flow bioreactor that included an aerobic and an anoxic section was constructed, and strain B6 was added to the bioreactor as inocula to explore the application of microbial nitrate-dependent Fe(II) oxidizing (NDFO) efficiency in wastewater treatment. The maximum NRE (anoxic section) and TNRE of 46.9% and 79.7%, respectively, could be obtained at a C/N ratio of 5.3:1 in the influent with HRT of 17. Meanwhile, the taxonomy composition of the reactor was assessed, as well. The NDFO metabolism of strain B6 could be expected because of its relatively dominant position in the anoxic section, whereas potential heterotrophic nitrification and aerobic denitrification developed into the prevailing status in the aerobic section after 50days of continuous operation.

Treatment of Alkaline Cr(VI)-Contaminated Leachate with an Alkaliphilic Metal-Reducing Bacterium

Chromium in its toxic Cr(VI) valence state is a common contaminant particularly associated with alkaline environments. A well-publicized case of this occurred in Glasgow, United Kingdom, where poorly controlled disposal of a cementitious industrial by-product, chromite ore processing residue (COPR), has resulted in extensive contamination by Cr(VI)-contaminated alkaline leachates. In the search for viable bioremediation treatments for Cr(VI), a variety of bacteria that are capable of reduction of the toxic and highly soluble Cr(VI) to the relatively nontoxic and less mobile Cr(III) oxidation state, predominantly under circumneutral pH conditions, have been isolated. Recently, however, alkaliphilic bacteria that have the potential to reduce Cr(VI) under alkaline conditions have been identified. This study focuses on the application of a metal-reducing bacterium to the remediation of alkaline Cr(VI)-contaminated leachates from COPR. This bacterium, belonging to the Halomonas genus, was found to exhibit growth concomitant to Cr(VI) reduction under alkaline conditions (pH 10). Bacterial cells were able to rapidly remove high concentrations of aqueous Cr(VI) (2.5 mM) under anaerobic conditions, up to a starting pH of 11. Cr(VI) reduction rates were controlled by pH, with slower removal observed at pH 11, compared to pH 10, while no removal was observed at pH 12. The reduction of aqueous Cr(VI) resulted in the precipitation of Cr(III) biominerals, which were characterized using transmission electron microscopy and energy-dispersive X-ray analysis (TEM-EDX) and X-ray photoelectron spectroscopy (XPS). The effectiveness of this haloalkaliphilic bacterium for Cr(VI) reduction at high pH suggests potential for its use as an in situ treatment of COPR and other alkaline Cr(VI)-contaminated environments.

Optimization of cultural conditions of Arthrobacter sp. Sphe3 for growth-associated chromate(VI) reduction in free and immobilized cell systems

The current study aimed to characterize Arthrobacter sp. Sphe3 ability to reduce Cr(VI) in suspended cell cultures as well as in immobilized form using Ca-alginate beads. Adaptation studies in the presence of 5 mg L(-1) Cr(VI) showed a significant increase in specific growth rate from 0.25 to 0.3 h(-1) and bioremoval percentage from 64% to 94% (p<0.05), whereas Arthrobacter sp. Sphe3 could tolerate up to 50 mg L(-1) Cr(VI). Optimization of culture conditions resulted in complete reduction of 45 mg L(-1) Cr(VI) at 30 °C, pH 8 and 10 g L(-1) of glucose. High glucose concentrations helped at reducing (80±2.4)% of initial 100 mg L(-1) Cr(VI), whereas the bacterial strain could tolerate 850 mg L(-1) Cr(VI). Cr(III) formation was first evidenced by the appearance of a green insoluble precipitate in the medium. Cell biomass was successfully immobilized in Ca-alginate beads that were evaluated for their stability. Cell release was sharply decreased when 4% Na-alginate was used under non-shaking conditions. Biotransformation efficiency was enhanced when 25-50 mg cells mL(-1) Na-alginate from the exponential growth phase were collected and co-encapsulated with either 1% glucose and 0.5% (NH4)2SO4, or 1% LB medium. Immobilized biocatalyst could be reused up to 6 continuous cycles in the presence of 10 mg L(-1) Cr(VI), but its performance was lowered at higher metal concentrations comparing with free cells that significantly maintained their reducing ability up to 300 mg L(-1) Cr(VI).