Microbial selenate detoxification linked to elemental sulfur oxidation: Independent and synergic pathways

Unveiling the vital role of soil microorganisms in selenium cycling: a review

Selenium (Se) is a vital trace element integral to numerous biological processes in both plants and animals, with significant impacts on soil health and ecosystem stability. This review explores how soil microorganisms facilitate Se transformations through reduction, oxidation, methylation, and demethylation processes, thereby influencing the bioavailability and ecological functions of Se. The microbial reduction of Se compounds, particularly the conversion of selenate and selenite to elemental Se nanoparticles (SeNPs), enhances Se assimilation by plants and impacts soil productivity. Key microbial taxa, including bacteria such as Pseudomonas and Bacillus, exhibit diverse mechanisms for Se reduction and play a substantial role in the global Se cycle. Understanding these microbial processes is essential for advancing soil management practices and improving ecosystem health. This review underscores the intricate interactions between Se and soil microorganisms, emphasizing their significance in maintaining ecological balance and promoting sustainable agricultural practices.

Cellulosimicrobium sp. Strain L1: A Study on the Optimization of the Conditions and Performance of a Combined Biological Trickling Filter for Hydrogen Sulfide Degradation

Sulfide is a toxic and hazardous substance in the agricultural environment, which can cause damage to humans and livestock when exposed to large amounts of air. In this study, we performed one-factor optimization of the culture conditions and culture fractions of the Cellulosimicrobium sp. strain L1 and combined it with a biological trickling filter cell for the degradation of hydrogen sulfide for 24 consecutive days. The degradation effect of strain L1 and the biological trickling filter (BTF) on hydrogen sulfide was investigated, and the changes in intermediate products in the degradation process were briefly analyzed. The results showed that strain L1 had the highest conversion efficiency when incubated with 3 g/L sucrose as the carbon source and 1 g/L NH4Cl as the nitrogen source at a temperature of 35 °C, an initial pH of 5, and a NaCl concentration of 1%. The concentration of thiosulfate increased and then decreased during the degradation process, and the concentration of sulfate increased continuously. When strain L1 was applied to the biological trickling filter, it could degrade 359.53 mg/m3 of H2S. This study provides a deeper understanding of sulfide degradation in biological trickling filters and helps promote the development of desulfurization technology and the treatment of malodorous gasses produced by the accumulation of large quantities of livestock manure.

Selenite selectively kills lung fibroblasts to treat bleomycin-induced pulmonary fibrosis

BACKGROUND

Interstitial lung disease (ILD) treatment is a critical unmet need. Selenium is an essential trace element for human life and an antioxidant that activates glutathione, but the gap between its necessity and its toxicity is small and requires special attention. Whether selenium can be used in the treatment of ILD remains unclear.

METHODS

We investigated the prophylactic and therapeutic effects of selenite, a selenium derivative, in ILD using a murine model of bleomycin-induced idiopathic pulmonary fibrosis (IPF). We further elucidated the underlying mechanism using in vitro cell models and examined their relevance in human tissue specimens. The therapeutic effect of selenite in bleomycin-administered mice was assessed by respiratory function and histochemical changes. Selenite-induced apoptosis and reactive oxygen species (ROS) production in murine lung fibroblasts were measured.

RESULTS

Selenite, administered 1 day (inflammation phase) or 8 days (fibrotic phase) after bleomycin, prevented and treated deterioration of lung function and pulmonary fibrosis in mice. Mechanistically, selenite inhibited the proliferation and induced apoptosis of murine lung fibroblasts after bleomycin treatment both in vitro and in vivo. In addition, selenite upregulated glutathione reductase (GR) and thioredoxin reductase (TrxR) in murine lung fibroblasts, but not in lung epithelial cells, upon bleomycin treatment. GR and TrxR inhibition eliminates the therapeutic effects of selenite. Furthermore, we found that GR and TrxR were upregulated in the human lung fibroblasts of IPF patient samples.

CONCLUSIONS

Selenite induces ROS production and apoptosis in murine lung fibroblasts through GR and TrxR upregulation, thereby providing a therapeutic effect in bleomycin-induced IPF.

Coupling of selenate reduction and pyrrhotite oxidation by indigenous microbial consortium in natural aquifer

Pyrrhotite is ubiquitously found in natural environment and involved in diverse (bio)processes. However, the pyrrhotite-driven bioreduction of toxic selenate [Se(VI)] remains largely unknown. This study demonstrates that Se(VI) is successfully bioreduced under anaerobic condition with the participation of pyrrhotite for the first time. Completely removal of Se(VI) was achieved at initial concentration of 10 mg/L Se(VI) and 0.56 mL/min flow rate in continuous column experiment with indigenous microbial consortium and pyrrhotite. Variation in hydrochemistry and hydrodynamics affected Se(VI) removal performance. Se(VI) was reduced to insoluble Se(0) while elements in pyrrhotite were oxidized to Fe(III) and SO₄^2-. Breakthrough study indicated that biotic activity contributed 81.4 ± 1.07% to Se(VI) transformation. Microbial community analysis suggested that chemoautotrophic genera (e.g., Thiobacillus) could realize pyrrhotite oxidation and Se(VI) reduction independently, while heterotrophic genera (e.g., Bacillus, Pseudomonas) contributed to Se(VI) detoxification by utilizing metabolic intermediates generated through Fe(II) and S(-II) oxidation, which were further verified by pure culture tests. Metagenomic and qPCR analyses indicated genes encoding enzymes for Se(VI) reduction (e.g., serA, napA and srdBAC), S oxidation (e.g., soxB) and Fe oxidation (e.g., mtrA) were upregulated. The elevated electron transporters (e.g., nicotinamide adenine dinucleotide, cytochrome c) promoted electron transfer from pyrrhotite to Se(VI). This study gains insights into Se biogeochemistry under the effect of Fe(II)-bearing minerals and provides a sustainable strategy for Se(VI) bioremediation in natural aquifer.

Concurrent reductive decontamination of chromium (VI) and uranium (VI) in groundwater by Fe(0)-based autotrophic bioprocess

The co-presence of chromium (VI) [Cr(VI)] and uranium (VI) [U(VI)] is widely found in groundwater, imposing severe risks on human health. Although zerovalent iron [Fe(0)] supports superb performance for bioreduction of Cr(VI) and U(VI) individually, the biogeochemical process involving their concurrent removal with Fe(0) as electron donor remains unexplored. In the 6-d batch study, 86.1% ± 0.7% of Cr(VI) was preferentially eliminated, while 78.4% ± 0.5% of U(VI) removal was achieved simultaneously. Efficient removal of Cr(VI) (100%) and U(VI) (51.2% ∼ 100%) was also obtained in a continuous 160-d column experiment. As a result, Cr(VI) and U(VI) were reduced to less mobile Cr(III) and insoluble U(IV), respectively. 16 S rRNA sequencing was performed to investigate the dynamics of microbial community. Delftia, Acinetobacter, Pseudomonas and Desulfomicrobium were the major contributors mediating the bioreduction process. The initial Cr(VI) and hydraulic retention time (HRT) incurred pronounced effects on community diversity, which in turn altered the reactor's performance. The enrichment of Cr(VI) resistance (chrA), U(VI) reduction (dsrA) and Fe(II) oxidation (mtrA) genes were observed by reverse transcription qPCR. Cytochrome c, glutathione and NADH as well as VFAs and gas metabolites also involved in the bioprocess. This study demonstrated a promising approach for removing the combined contaminants of Cr(VI) and U(VI) in groundwater.

Pivotal biological processes and proteins for selenite reduction and methylation in Ganoderma lucidum

Microbial transformations, especially the reduction and methylation of Se oxyanion, have gained significance in recent years as effective detoxification methods. Ganoderma lucidum is a typical Se enrichment resource that can reduce selenite to elemental Se and volatile Se metabolites under high selenite conditions. However, the detailed biological processes and reduction mechanisms are unclear. In this study, G. lucidum reduced selenite to elemental Se and further aggregated it into Se nanoparticles with a diameter of < 200 nm, simultaneously accompanied by the production of pungent, odorous, and volatile methyl-selenium metabolites. Tandem mass tag-based quantitative proteomic analysis revealed thioredoxin 1, thioredoxin reductase (NADPH), glutathione reductase, 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase, and cystathionine gamma-lyase as proteins involved in selenite reduction and methylation. Furthermore, the high expression of proteins associated with cell structures that prompted cell lysis may have facilitated Se release. The upregulation of proteins involved in the defense reactions was also detected, reflecting their roles in the self-defense mechanism. This study provides novel insights into the vital role of G. lucidum in mediating Se transformation in the biogeochemical Se cycle and contributes to the application of fungi in Se bioremediation.

Vanadate Bio-Detoxification Driven by Pyrrhotite with Secondary Mineral Formation

Vanadium(V) is a redox-sensitive heavy-metal contaminant whose environmental mobility is strongly influenced by pyrrhotite, a widely distributed iron sulfide mineral. However, relatively little is known about microbially mediated vanadate [V(V)] reduction characteristics driven by pyrrhotite and concomitant mineral dynamics in this process. This study demonstrated efficient V(V) bioreduction during 210 d of operation, with a lifespan about 10 times longer than abiotic control, especially in a stable period when the V(V) removal efficiency reached 44.1 ± 13.8%. Pyrrhotite oxidation coupled to V(V) reduction could be achieved by an enriched single autotroph (e.g., Thiobacillus and Thermomonas) independently. Autotrophs (e.g., Sulfurifustis) gained energy from pyrrhotite oxidation to synthesize organic intermediates, which were utilized by the heterotrophic V(V) reducing bacteria such as Anaerolinea, Bacillus, and Pseudomonas to sustain V(V) reduction. V(V) was reduced to insoluble tetravalent V, while pyrrhotite oxidation mainly produced Fe(III) and SO₄^2-. Secondary minerals including mackinawite (FeS) and greigite (Fe₃S₄) were produced synchronously, resulting from further transformations of Fe(III) and SO₄^2- by sulfate reducing bacteria (e.g., Desulfatiglans) and magnetotactic bacteria (e.g., Nitrospira). This study provides new insights into the biogeochemical behavior of V under pyrrhotite effects and reveals the previously overlooked mineralogical dynamics in V(V) reduction bioprocesses driven by Fe(II)-bearing minerals.

Enhanced biological antimony removal from water by combining elemental sulfur autotrophic reduction and disproportionation

Antimony (Sb), a toxic metalloid, has serious negative effects on human health and its pollution has become a global environmental problem. Bio-reduction of Sb(V) is an effective Sb-removal approach. This work, for the first time, demonstrates the feasibility of autotrophic Sb(V) bio-reduction and removal coupled to anaerobic oxidation of elemental sulfur (S⁰). In the S⁰-based biological system, Sb(V) was reduced to Sb(III) via autotrophic bacteria by using S⁰ as electron donor. Meanwhile, S⁰ disproportionation reaction occurred under anaerobic condition, generating sulfide and SO₄^2- in the bio-systems. Subsequently, Sb(III) reacted with sulfide and formed Sb(III)-S precipitate, achieving an effective total Sb removal. The precipitate was identified as Sb₂S₃ by SEM-EDS, XPS, XRD and Raman spectrum analyses. In addition, it was found that co-existing nitrate inhibited the Sb removal, as nitrate is the favored electron acceptor over Sb(V). In contrast, the bio-reduction of co-existing SO₄^2- enhanced sulfide generation, followed by promoting Sb(V) reduction and precipitation. Illumina high-throughput sequencing analysis revealed that Metallibacterium, Citrobacter and Thiobacillus might be responsible for Sb(V) reduction and S⁰ disproportionation. This study provides a promising approach for the remediation of Sb(V)-contaminated water.

Efficient nitrogen removal from stormwater runoff by bioretention system: The construction of plant carbon source-based heterotrophic and sulfur autotrophic denitrification process

The plant carbon source and sulfur were selected as the denitrification electron donors and filled in the internal water storage zone (IWSZ) of bioretention system to establish excellent mixotrophic denitrification system, which was beneficial to waste recycling and showed very high nitrate nitrogen removal efficiency (approximately 94%). The ammonia nitrogen, total nitrogen, and chemical oxygen demand removal efficiencies could reach 79.41%, 85.89%, and 74.07%, respectively. Mechanism study revealed the synergistic degradation effect was existed between acetic acid released from plant carbon source and the generated sulfate, which improved the S/CH₃COOH mediated nitrate nitrogen removal reactions. Autotrophic denitrification occurred mainly in the upper layer of IWSZ, and the dominant bacteria were Thiobacillus. While in the lower layer, the dominant bacteria were mainly related to organic matter utilization and heterotrophic denitrification. The abundance of narG, nirK, nirS, and nosZ functional genes in the upper layer was significantly higher than the lower layers.

Nanozymes with reductase-like activities: antioxidant properties and electrochemical behavior

Nanozymes (NZs) as stable cost-effective mimics of natural enzymes may be promising catalysts in food and environmental biotechnology, biosensors, alternative energy and medicine. The majority of known NZs are mimetics of oxidoreductases, although there are only limited data regarding mimetics of reductases. In the present research, a number of metal-based NZs were synthesized via chemical methods and screened for their antioxidant ability in solution. The most effective reductase-like Zn/Cd/Cu NZ was characterized in detail. Its antioxidant properties in comparison with several food products and Trolox, as well as substrate specificity, size and composition were studied. Zn/Cd/Cu NZ was shown to mimic preferentially selenite reductase. The amperometric sensor was constructed possessing a high sensitivity (1700 A M-1 m-2) and a broad linear range (16-1000 μM) for selenite ions. The possibility to apply the fabricated sensor for selenite determination in commercial mineral water has been demonstrated.