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Hautavoine H, Arnaud J, Balzeau A, Mounier A. Quantifying hominin morphological diversity at the end of the middle Pleistocene: Implications for the origin of Homo sapiens. AMERICAN JOURNAL OF BIOLOGICAL ANTHROPOLOGY 2024; 184:e24915. [PMID: 38444398 DOI: 10.1002/ajpa.24915] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Revised: 12/25/2023] [Accepted: 01/28/2024] [Indexed: 03/07/2024]
Abstract
OBJECTIVES The Middle Pleistocene (MP) saw the emergence of new species of hominins: Homo sapiens in Africa, H. neanderthalensis, and possibly Denisovans in Eurasia, whose most recent common ancestor is thought to have lived in Africa around 600 ka ago. However, hominin remains from this period present a wide range of morphological variation making it difficult to securely determine their taxonomic attribution and their phylogenetic position within the Homo genus. This study proposes to reconsider the phenetic relationships between MP hominin fossils in order to clarify evolutionary trends and contacts between the populations they represent. MATERIALS AND METHODS We used a Geometric Morphometrics approach to quantify the morphological variation of the calvarium of controversial MP specimens from Africa and Eurasia by using a comparative sample that can be divided into 5 groups: H. ergaster, H. erectus, H. neanderthalensis, and H. sapiens, as well as individuals from current modern human populations. We performed a Generalized Procrustes Analysis, a Principal Component Analysis, and Multinomial Principal Component Logistic Regressions to determine the phenetic affinities of the controversial Middle Pleistocene specimens with the other groups. RESULTS MP African and Eurasian specimens represent several populations, some of which show strong affinities with H. neanderthalensis in Europe or H. sapiens in Africa, others presenting multiple affinities. DISCUSSION These MP populations might have contributed to the emergence of these two species in different proportions. This study proposes a new framework for the human evolutionary history during the MP.
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Affiliation(s)
- Hugo Hautavoine
- PaléoFED, Histoire Naturelle de l'Homme Préhistorique (HNHP, UMR 7194), MNHN/CNRS/UPVD, Paris, France
| | - Julie Arnaud
- PaléoFED, Histoire Naturelle de l'Homme Préhistorique (HNHP, UMR 7194), MNHN/CNRS/UPVD, Paris, France
- Dipartimento di Studi Umanistici, Università degli Studi di Ferrara, Ferrara, Italy
| | - Antoine Balzeau
- PaléoFED, Histoire Naturelle de l'Homme Préhistorique (HNHP, UMR 7194), MNHN/CNRS/UPVD, Paris, France
- Département de Zoologie Africaine, Musée Royal de l'Afrique Centrale, Tervuren, Belgium
| | - Aurélien Mounier
- PaléoFED, Histoire Naturelle de l'Homme Préhistorique (HNHP, UMR 7194), MNHN/CNRS/UPVD, Paris, France
- Turkana Basin Institute, Nairobi, Kenya
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Zhang Y, Urciuoli A, Zanolli C, Kullmer O, Wu X. Three-dimensional geometric morphometric analysis of the bony labyrinth of Xujiayao 6. J Hum Evol 2024; 189:103514. [PMID: 38547737 DOI: 10.1016/j.jhevol.2024.103514] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2023] [Revised: 02/17/2024] [Accepted: 02/17/2024] [Indexed: 04/08/2024]
Affiliation(s)
- Yameng Zhang
- Joint International Research Laboratory of Environmental and Social Archaeology, Shandong University, Qingdao, 266237, China; Institute of Cultural Heritage, Shandong University, Qingdao, 266237, China
| | - Alessandro Urciuoli
- Universitat Autònoma de Barcelona, Campus de la UAB, 08193 Cerdanyola del Vallès, Barcelona, Spain; Institut Català de Paleontologia Miquel Crusafont (ICP-CERCA), Universitat Autònoma de Barcelona, Edifici ICTA-ICP, c/ Columnes s/n, 08193 Cerdanyola del Vallès, Barcelona, Spain; Division of Palaeoanthropology, Senckenberg Research Institute and Natural History Museum Frankfurt, Senckenberganlage 25, 60325, Frankfurt am Main, Germany; Universidad de Alcalá, Cátedra de Otoacústica Evolutiva y Paleoantropología (HM Hospitales-UAH), Departamento de Ciencias de la Vida, 28871, Alcalá de Henares, Madrid, Spain.
| | - Clément Zanolli
- Univ. Bordeaux, CNRS, MCC, PACEA, UMR 5199, F-33600, Pessac, France
| | - Ottmar Kullmer
- Division of Palaeoanthropology, Senckenberg Research Institute and Natural History Museum Frankfurt, Senckenberganlage 25, 60325, Frankfurt am Main, Germany; Department of Paleobiology and Environment, Institute of Ecology, Evolution, and Diversity, Goethe University, Max-von-Laue-Str. 13, 60438 Frankfurt, Germany
| | - Xiujie Wu
- Key Laboratory of Vertebrate Evolution and Human Origins, Institute of Vertebrate Paleontology and Paleoanthropology, Chinese Academy of Sciences, Beijing, China.
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Larena M, McKenna J, Sanchez-Quinto F, Bernhardsson C, Ebeo C, Reyes R, Casel O, Huang JY, Hagada KP, Guilay D, Reyes J, Allian FP, Mori V, Azarcon LS, Manera A, Terando C, Jamero L, Sireg G, Manginsay-Tremedal R, Labos MS, Vilar RD, Latiph A, Saway RL, Marte E, Magbanua P, Morales A, Java I, Reveche R, Barrios B, Burton E, Salon JC, Kels MJT, Albano A, Cruz-Angeles RB, Molanida E, Granehäll L, Vicente M, Edlund H, Loo JH, Trejaut J, Ho SYW, Reid L, Lambeck K, Malmström H, Schlebusch C, Endicott P, Jakobsson M. Philippine Ayta possess the highest level of Denisovan ancestry in the world. Curr Biol 2021; 31:4219-4230.e10. [PMID: 34388371 PMCID: PMC8596304 DOI: 10.1016/j.cub.2021.07.022] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2021] [Revised: 05/04/2021] [Accepted: 07/12/2021] [Indexed: 12/30/2022]
Abstract
Multiple lines of evidence show that modern humans interbred with archaic Denisovans. Here, we report an account of shared demographic history between Australasians and Denisovans distinctively in Island Southeast Asia. Our analyses are based on ∼2.3 million genotypes from 118 ethnic groups of the Philippines, including 25 diverse self-identified Negrito populations, along with high-coverage genomes of Australopapuans and Ayta Magbukon Negritos. We show that Ayta Magbukon possess the highest level of Denisovan ancestry in the world-∼30%-40% greater than that of Australians and Papuans-consistent with an independent admixture event into Negritos from Denisovans. Together with the recently described Homo luzonensis, we suggest that there were multiple archaic species that inhabited the Philippines prior to the arrival of modern humans and that these archaic groups may have been genetically related. Altogether, our findings unveil a complex intertwined history of modern and archaic humans in the Asia-Pacific region, where distinct Islander Denisovan populations differentially admixed with incoming Australasians across multiple locations and at various points in time.
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Affiliation(s)
- Maximilian Larena
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden.
| | - James McKenna
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden
| | - Federico Sanchez-Quinto
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden; Instituto Nacional de Medicina Genómica (INMEGEN), Mexico City 14610, Mexico
| | - Carolina Bernhardsson
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden
| | - Carlo Ebeo
- National Committee on Cultural Education, National Commission for Culture and the Arts, Intramuros, Manila, Philippines; National Museum of the Philippines, Padre Burgos Avenue, Rizal Park, Ermita, Manila, Philippines
| | - Rebecca Reyes
- Ayta Magbukon Cultural Bearer, Ayta Magbukon Indigenous Cultural Community, Abucay, Bataan, Philippines; National Commission on Indigenous Peoples, Philippines
| | - Ophelia Casel
- Mindanao Doctors Hospital and Cancer Center, Kabacan, Cotabato, Philippines
| | - Jin-Yuan Huang
- Molecular Anthropology and Transfusion Medicine Research Laboratory, Mackay Memorial Hospital, Taipei City 10449, Taiwan
| | - Kim Pullupul Hagada
- National Commission on Indigenous Peoples, Philippines; Young Indigenous Peoples Empowered to Act in Community Engagement, Diffun, Quirino
| | - Dennis Guilay
- Balangao Indigenous Cultural Community, Paracelis, Mountain Province, Cordillera Administrative Region, Philippines
| | - Jennelyn Reyes
- Department of Education - Bataan Division, Bataan, Philippines
| | - Fatima Pir Allian
- Nisa Ul Haqq fi Bangsamoro, Zamboanga City, Bangsamoro Autonomous Region in Muslim Mindanao, Philippines; Tarbilang Foundation, Inc., Bongao, Tawi-Tawi, Bangsamoro Autonomous Region in Muslim Mindanao, Philippines
| | - Virgilio Mori
- Tarbilang Foundation, Inc., Bongao, Tawi-Tawi, Bangsamoro Autonomous Region in Muslim Mindanao, Philippines
| | - Lahaina Sue Azarcon
- Center for Language and Culture, Quirino State University, Barangay Andres Bonifacio, Diffun, Quirino, Philippines
| | - Alma Manera
- Center for Language and Culture, Cagayan State University - Andrews Campus, Caritan Highway, Tuguegarao, Cagayan, Philippines
| | - Celito Terando
- Tagakaulo Indigenous Cultural Community, Malungon, Sarangani, Philippines; Sulong Tribu Program, Provincial Government of Sarangani, Glan, Sarangani, Philippines
| | - Lucio Jamero
- Ayta Magbukon Cultural Bearer, Ayta Magbukon Indigenous Cultural Community, Abucay, Bataan, Philippines
| | - Gauden Sireg
- Subanen Indigenous Cultural Community, Lakewood, Zamboanga del Sur, Philippines; Dumendingan Arts Guild Inc., Pagadian City, Zamboanga del Sur, Philippines
| | | | - Maria Shiela Labos
- Ateneo Institute of Anthropology, Ateneo de Davao University, Roxas Avenue, 8016 Davao City, Philippines; Museo Dabawenyo, Andres Bonifacio Rotunda, Poblacion District, Davao City, Philippines
| | - Richard Dian Vilar
- Cultural Outreach Program, Kaliwat Performing Artists Collective, Gumamela St., Lanang, Davao City, Philippines; Culture, Heritage, and Arts Office, Local Government Unit of Butuan, Butuan City, Philippines
| | - Acram Latiph
- Institute for Peace and Development in Mindanao, Mindanao State University - Marawi Campus, Marawi City, Lanao del Sur, Bangsamoro Autonomous Region in Muslim Mindanao, Philippines
| | | | - Erwin Marte
- Legal Affairs Office, Indigenous People's Mandatory Representative - Sangguniang Panlalawigan, Bukidnon, Northern Mindanao, Philippines
| | - Pablito Magbanua
- National Commission on Indigenous Peoples, Philippines; Cuyonon Indigenous Cultural Community, Cuyo Island, Palawan, Philippines
| | - Amor Morales
- Surigaonon Heritage Center, Surigao City, Surigao del Norte, Philippines
| | - Ismael Java
- Kabankalan City Cultural and Tourism Foundation, Inc., Kabankalan City, Negros Occidental, Philippines; Cultural Research and Documentation, Negros Museum, Gatuslao St., Bacolod, Negros Occidental, Philippines
| | - Rudy Reveche
- Cultural Research and Documentation, Negros Museum, Gatuslao St., Bacolod, Negros Occidental, Philippines; Culture and Arts Program, Colegio San Agustin, BS Aquino Drive, Bacolod, Negros Occidental, Philippines
| | - Becky Barrios
- Panaghiusa Alang Sa Kaugalingnan Ug Kalingkawasan, Inc., Bunawan, Agusan del Sur, Philippines; Agusan Manobo Indigenous Cultural Community, La Paz, Agusan del Sur, Philippines
| | - Erlinda Burton
- Museo de Oro, Xavier University - Ateneo de Cagayan, Corrales Avenue, Cagayan de Oro City, Philippines
| | - Jesus Christopher Salon
- Museo de Oro, Xavier University - Ateneo de Cagayan, Corrales Avenue, Cagayan de Oro City, Philippines; City Museum of Cagayan de Oro, Fernandez St., Cagayan de Oro City, Philippines
| | - Ma Junaliah Tuazon Kels
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden
| | - Adrian Albano
- Kalanguya Indigenous Cultural Community, Tinoc, Ifugao, Cordillera Administrative Region, Philippines; Office of Tinoc Campus Administrator, Ifugao State University, Tinoc, Ifugao, Cordillera Administrative Region, Philippines
| | | | - Edison Molanida
- Heritage Office, National Commission for Culture and the Arts, Intramuros, Manila, Philippines; Office of the Executive Director, National Commission for Culture and the Arts, Intramuros, Manila, Philippines
| | - Lena Granehäll
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden
| | - Mário Vicente
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden
| | - Hanna Edlund
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden
| | - Jun-Hun Loo
- Molecular Anthropology and Transfusion Medicine Research Laboratory, Mackay Memorial Hospital, Taipei City 10449, Taiwan
| | - Jean Trejaut
- Molecular Anthropology and Transfusion Medicine Research Laboratory, Mackay Memorial Hospital, Taipei City 10449, Taiwan
| | - Simon Y W Ho
- School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, Australia
| | - Lawrence Reid
- Department of Linguistics, University of Hawai'i at Mānoa, Mānoa, HI, USA; National Museum of the Philippines, Padre Burgos Avenue, Rizal Park, Ermita, Manila, Philippines
| | - Kurt Lambeck
- Research School of Earth Sciences, The Australian National University, Canberra, ACT 0200, Australia
| | - Helena Malmström
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden; Palaeo-Research Institute, University of Johannesburg, PO Box 524, Auckland Park 2006, South Africa
| | - Carina Schlebusch
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden; Palaeo-Research Institute, University of Johannesburg, PO Box 524, Auckland Park 2006, South Africa; SciLifeLab, Stockholm and Uppsala, Sweden
| | - Phillip Endicott
- Department Hommes Natures Societies, Musée de l'Homme, 75016 Paris, Ile de France, France
| | - Mattias Jakobsson
- Human Evolution, Department of Organismal Biology, Uppsala University, Norbyvägen 18C, 752 36 Uppsala, Sweden; Palaeo-Research Institute, University of Johannesburg, PO Box 524, Auckland Park 2006, South Africa; SciLifeLab, Stockholm and Uppsala, Sweden.
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