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For: Liu X, Wang S, Sendi L, Caulfield MJ. High-throughput imaging of bacterial colonies grown on filter plates with application to serum bactericidal assays. J Immunol Methods 2004;292:187-93. [PMID: 15350523 DOI: 10.1016/j.jim.2004.06.021] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/21/2004] [Revised: 06/23/2004] [Accepted: 06/29/2004] [Indexed: 11/27/2022]
Number Cited by Other Article(s)
1
Lu T, Howlader DR, Das S, Dietz ZK, Nagel AC, Whittier SK, Picking WD, Picking WL. The L-DBF vaccine cross protects mice against different Shigella serotypes after prior exposure to the pathogen. Microbiol Spectr 2023;11:e0006223. [PMID: 37787548 PMCID: PMC10714971 DOI: 10.1128/spectrum.00062-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/10/2023] [Accepted: 08/20/2023] [Indexed: 10/04/2023]  Open
2
Liu SJ, Huang PC, Liu XS, Lin JJ, Zou Z. A two-stage deep counting for bacterial colonies from multi-sources. Appl Soft Comput 2022. [DOI: 10.1016/j.asoc.2022.109706] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
3
Antibiotic combinations reduce Staphylococcus aureus clearance. Nature 2022;610:540-546. [PMID: 36198788 PMCID: PMC9533972 DOI: 10.1038/s41586-022-05260-5] [Citation(s) in RCA: 43] [Impact Index Per Article: 21.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2020] [Accepted: 08/22/2022] [Indexed: 12/17/2022]
4
Zhang J, Li C, Rahaman MM, Yao Y, Ma P, Zhang J, Zhao X, Jiang T, Grzegorzek M. A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements. ARCHIVES OF COMPUTATIONAL METHODS IN ENGINEERING : STATE OF THE ART REVIEWS 2022;30:639-673. [PMID: 36091717 PMCID: PMC9446599 DOI: 10.1007/s11831-022-09811-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2021] [Accepted: 08/22/2022] [Indexed: 05/25/2023]
5
Chorti P, Kazi AP, Wiederoder M, Christodouleas DC. High-Throughput Flow-Through Direct Immunoassays for Targeted Bacteria Detection. Anal Chem 2021;93:14586-14592. [PMID: 34714057 DOI: 10.1021/acs.analchem.1c02867] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
6
A comprehensive review of image analysis methods for microorganism counting: from classical image processing to deep learning approaches. Artif Intell Rev 2021;55:2875-2944. [PMID: 34602697 PMCID: PMC8478609 DOI: 10.1007/s10462-021-10082-4] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
7
Zhu G, Yan B, Xing M, Tian C. Automated counting of bacterial colonies on agar plates based on images captured at near-infrared light. J Microbiol Methods 2018;153:66-73. [PMID: 30195830 DOI: 10.1016/j.mimet.2018.09.004] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2018] [Revised: 08/25/2018] [Accepted: 09/05/2018] [Indexed: 10/28/2022]
8
Barta ML, Tachiyama S, Muthuramalingam M, Arizmendi O, Villanueva CE, Ramyar KX, Geisbrecht BV, Lovell S, Battaile KP, Picking WL, Picking WD. Using disruptive insertional mutagenesis to identify the in situ structure-function landscape of the Shigella translocator protein IpaB. Protein Sci 2018;27:1392-1406. [PMID: 29672980 DOI: 10.1002/pro.3428] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2018] [Revised: 04/12/2018] [Accepted: 04/16/2018] [Indexed: 11/11/2022]
9
Cordonnier C, Ljungman P, Juergens C, Maertens J, Selleslag D, Sundaraiyer V, Giardina PC, Clarke K, Gruber WC, Scott DA, Schmoele-Thoma B. Immunogenicity, safety, and tolerability of 13-valent pneumococcal conjugate vaccine followed by 23-valent pneumococcal polysaccharide vaccine in recipients of allogeneic hematopoietic stem cell transplant aged ≥2 years: an open-label study. Clin Infect Dis 2015;61:313-23. [PMID: 25870329 PMCID: PMC4503811 DOI: 10.1093/cid/civ287] [Citation(s) in RCA: 72] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/13/2014] [Accepted: 03/23/2015] [Indexed: 12/23/2022]  Open
10
Townsend K, Ladhani SN, Findlow H, Borrow R. Evaluation and validation of a serum bactericidal antibody assay for Haemophilus influenzae type b and the threshold of protection. Vaccine 2014;32:5650-6. [PMID: 25138290 DOI: 10.1016/j.vaccine.2014.08.010] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2014] [Revised: 07/10/2014] [Accepted: 08/06/2014] [Indexed: 11/30/2022]
11
13-Valent pneumococcal conjugate vaccine in older children and adolescents either previously immunized with or naïve to 7-valent pneumococcal conjugate vaccine. Pediatr Infect Dis J 2014;33:183-9. [PMID: 24136369 DOI: 10.1097/inf.0000000000000056] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
12
Decreased immune response to pneumococcal conjugate vaccine after 23-valent pneumococcal polysaccharide vaccine in children. Vaccine 2014;32:417-24. [DOI: 10.1016/j.vaccine.2013.11.029] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2013] [Revised: 09/17/2013] [Accepted: 11/06/2013] [Indexed: 11/20/2022]
13
Bae E, Ying D, Kramer D, Patsekin V, Rajwa B, Holdman C, Sturgis J, Davisson VJ, Robinson JP. Portable bacterial identification system based on elastic light scatter patterns. J Biol Eng 2012;6:12. [PMID: 22929757 PMCID: PMC3490744 DOI: 10.1186/1754-1611-6-12] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2012] [Accepted: 08/23/2012] [Indexed: 11/21/2022]  Open
14
Randomized, controlled trial of a 13-valent pneumococcal conjugate vaccine administered concomitantly with an influenza vaccine in healthy adults. CLINICAL AND VACCINE IMMUNOLOGY : CVI 2012;19:1296-303. [PMID: 22739693 DOI: 10.1128/cvi.00176-12] [Citation(s) in RCA: 55] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
15
Harris SL, Zhu D, Murphy E, McNeil LK, Wang X, Mayer LW, Harrison LH, Jansen KU, Anderson AS. Preclinical evidence for the potential of a bivalent fHBP vaccine to prevent Neisseria meningitidis Serogroup C Disease. HUMAN VACCINES 2011;7 Suppl:68-74. [PMID: 21245657 DOI: 10.4161/hv.7.0.14564] [Citation(s) in RCA: 40] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
16
Clarke ML, Burton RL, Hill AN, Litorja M, Nahm MH, Hwang J. Low-cost, high-throughput, automated counting of bacterial colonies. Cytometry A 2010;77:790-7. [PMID: 20140968 PMCID: PMC2909336 DOI: 10.1002/cyto.a.20864] [Citation(s) in RCA: 72] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
17
Buzalewicz I, Wysocka-Król K, Podbielska H. Image processing guided analysis for estimation of bacteria colonies number by means of optical transforms. OPTICS EXPRESS 2010;18:12992-13005. [PMID: 20588428 DOI: 10.1364/oe.18.012992] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/29/2023]
18
Sieuwerts S, de Bok FAM, Mols E, de vos WM, Vlieg JETVH. A simple and fast method for determining colony forming units. Lett Appl Microbiol 2009;47:275-8. [PMID: 18778376 DOI: 10.1111/j.1472-765x.2008.02417.x] [Citation(s) in RCA: 120] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
19
High-frequency ultrasound assessment of antimicrobial photodynamic therapy in vitro. J Biol Phys 2007;33:61-6. [PMID: 19669553 DOI: 10.1007/s10867-007-9042-3] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2006] [Accepted: 06/13/2007] [Indexed: 10/23/2022]  Open
20
Wang S, Indrawati L, Wooters M, Caro-Aguilar I, Field J, Kaufhold R, Payne A, Caulfield MJ, Smith JG, Heinrichs JH. A novel automated method for enumeration of Chlamydia trachomatis inclusion forming units. J Immunol Methods 2007;324:84-91. [PMID: 17553519 DOI: 10.1016/j.jim.2007.05.004] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2007] [Revised: 05/08/2007] [Accepted: 05/09/2007] [Indexed: 11/20/2022]
21
Borrow R, Carlone GM, Rosenstein N, Blake M, Feavers I, Martin D, Zollinger W, Robbins J, Aaberge I, Granoff DM, Miller E, Plikaytis B, van Alphen L, Poolman J, Rappuoli R, Danzig L, Hackell J, Danve B, Caulfield M, Lambert S, Stephens D. Neisseria meningitidis group B correlates of protection and assay standardization--international meeting report Emory University, Atlanta, Georgia, United States, 16-17 March 2005. Vaccine 2006;24:5093-107. [PMID: 16838413 DOI: 10.1016/j.vaccine.2006.03.091] [Citation(s) in RCA: 150] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
22
Romero-Steiner S, Frasch CE, Carlone G, Fleck RA, Goldblatt D, Nahm MH. Use of opsonophagocytosis for serological evaluation of pneumococcal vaccines. CLINICAL AND VACCINE IMMUNOLOGY : CVI 2006;13:165-9. [PMID: 16467321 PMCID: PMC1391943 DOI: 10.1128/cvi.13.2.165-169.2006] [Citation(s) in RCA: 161] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [MESH Headings] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
23
Putman M, Burton R, Nahm MH. Simplified method to automatically count bacterial colony forming unit. J Immunol Methods 2005;302:99-102. [PMID: 16002082 DOI: 10.1016/j.jim.2005.05.003] [Citation(s) in RCA: 40] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2005] [Revised: 05/02/2005] [Accepted: 05/03/2005] [Indexed: 11/29/2022]
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