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Mijovilovich A, Cloetens P, Lanzirotti A, Newville M, Wellenreuther G, Kumari P, Katsaros C, Carrano CJ, Küpper H, Küpper FC. Synchrotron X-rays reveal the modes of Fe binding and trace metal storage in the brown algae Laminaria digitata and Ectocarpus siliculosus. Metallomics 2023; 15:mfad058. [PMID: 37740572 PMCID: PMC10588612 DOI: 10.1093/mtomcs/mfad058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Accepted: 09/21/2023] [Indexed: 09/24/2023]
Abstract
Iron is accumulated symplastically in kelp in a non-ferritin core that seems to be a general feature of brown algae. Microprobe studies show that Fe binding depends on tissue type. The sea is generally an iron-poor environment and brown algae were recognized in recent years for having a unique, ferritin-free iron storage system. Kelp (Laminaria digitata) and the filamentous brown alga Ectocarpus siliculosus were investigated using X-ray microprobe imaging and nanoprobe X-ray fluorescence tomography to explore the localization of iron, arsenic, strontium, and zinc, and micro-X-ray absorption near-edge structure (μXANES) to study Fe binding. Fe distribution in frozen hydrated environmental samples of both algae shows higher accumulation in the cortex with symplastic subcellular localization. This should be seen in the context of recent ultrastructural insight by cryofixation-freeze substitution that found a new type of cisternae that may have a storage function but differs from the apoplastic Fe accumulation found by conventional chemical fixation. Zn distribution co-localizes with Fe in E. siliculosus, whereas it is chiefly located in the L. digitata medulla, which is similar to As and Sr. Both As and Sr are mostly found at the cell wall of both algae. XANES spectra indicate that Fe in L. digitata is stored in a mineral non-ferritin core, due to the lack of ferritin-encoding genes. We show that the L. digitata cortex contains mostly a ferritin-like mineral, while the meristoderm may include an additional component.
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Affiliation(s)
- Ana Mijovilovich
- Czech Academy of Sciences, Biology Centre, Institute of Plant Molecular Biology, Laboratory of Plant Biophysics and Biochemistry, Branišovska 1160/31, 370 05 Česke Budějovice, Czech Republic
| | - Peter Cloetens
- ESRF—The European Synchrotron Radiation Facility, Beamline ID16A, 71, avenue des Martyrs CS 40220 38043 Grenoble Cedex 9, France
| | - Antonio Lanzirotti
- Argonne National Laboratory, The University of Chicago, Building 434A, 9700 South Cass Avenue, Lemont, IL 60439, USA
| | - Matt Newville
- Argonne National Laboratory, The University of Chicago, Building 434A, 9700 South Cass Avenue, Lemont, IL 60439, USA
| | | | - Puja Kumari
- School of Biological Sciences, University of Aberdeen, Cruickshank Building, St Machar Drive, Aberdeen AB24 3UU, UK
| | - Christos Katsaros
- Department of Biology, National and Kapodistrian University of Athens, Panepistimiopolis, Athens 157 84, Hellas, Greece
| | - Carl J Carrano
- Department of Chemistry and Biochemistry, San Diego State University, CA 92182-1030,USA
| | - Hendrik Küpper
- Czech Academy of Sciences, Biology Centre, Institute of Plant Molecular Biology, Laboratory of Plant Biophysics and Biochemistry, Branišovska 1160/31, 370 05 Česke Budějovice, Czech Republic
- Department of Experimental Plant Biology, University of South Bohemia, Branišovská 31/1160, 370 05 České Budějovice, Czech Republic
| | - Frithjof C Küpper
- School of Biological Sciences, University of Aberdeen, Cruickshank Building, St Machar Drive, Aberdeen AB24 3UU, UK
- Department of Chemistry and Biochemistry, San Diego State University, CA 92182-1030,USA
- Marine Biodiscovery Centre, Department of Chemistry, University of Aberdeen, Aberdeen AB24 3UE, UK
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Kamnev AA, Tugarova AV. Bioanalytical applications of Mössbauer spectroscopy. RUSSIAN CHEMICAL REVIEWS 2021. [DOI: 10.1070/rcr5006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Abstract
Data on the applications of Mössbauer spectroscopy in the transmission (mainly on 57Fe nuclei) and emission (on 57Co nuclei) variants for analytical studies at the molecular level of metal-containing components in a wide range of biological objects (from biocomplexes and biomacromolecules to supramolecular structures, cells, tissues and organisms) and of objects that are participants or products of biological processes, published in the last 15 years are discussed and systematized. The prospects of the technique in its biological applications, including the developing fields (emission variant, use of synchrotron radiation), are formulated.
The bibliography includes 248 references.
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Zhang Q, Snow JT, Holdship P, Price D, Watson P, Rickaby REM. Direct measurement of multi-elements in high matrix samples with a flow injection ICP-MS: application to the extended Emiliania huxleyi Redfield ratio. JOURNAL OF ANALYTICAL ATOMIC SPECTROMETRY 2018; 33:1196-1208. [PMID: 30034070 PMCID: PMC6032269 DOI: 10.1039/c8ja00031j] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Accepted: 04/24/2018] [Indexed: 06/02/2023]
Abstract
The quotas of a limited number of trace elements in the extended Redfield ratios have been determined before and thought to reflect the requirements of phytoplankton. However, these quotas are found to be quite variable under different environmental conditions, suggesting that the cellular trace metal quota is not an accurate measure of cellular trace metal requirement. Here we present a method that has been developed and optimised for direct analysis of 32 elements simultaneously in small volume of cell lysate in buffers with a high salt matrix (800 μL, up to 30% TDS). We then demonstrate the application of the method to resolve the extended Redfield ratio of cell requirement by measuring the intracellular trace element composition of six Emiliania huxleyi strains isolated from different locations. The method uses a quadrupole-ICP-MS with a collision/reaction cell to resolve polyatomic interferences. The ICP-MS is interfaced with an Elemental Scientific Flow Injection Automation System (FIAS). The accuracy of the analysis according to this new method is verified by measuring 2 certified reference materials, BCR 273 and BCR 414. This work presents a number of running parameters, optimised for multi-element analysis of samples with a high TDS sample matrix. This method allows direct measurement of protein samples in their native state: no alteration or digestion is needed, which simplifies the steps for sample preparation. In this study with 6 E. huxleyi strains isolated from the environment, our method reveals significant differences between whole cell and intracellular metal quotas for all strains. The intracellular metal composition, interpreted as a truer representation of organisms' metal requirements, shows an environmentally dependent signal. This suggests that, compared with whole cell metal quotas, the metalloproteins are a better indicator of metal requirements of phytoplankton under various environmental conditions.
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Affiliation(s)
- Qiong Zhang
- Department of Earth Sciences , University of Oxford , OX1 3AN , UK .
| | - Joseph T Snow
- Department of Earth Sciences , University of Oxford , OX1 3AN , UK .
| | - Phil Holdship
- Department of Earth Sciences , University of Oxford , OX1 3AN , UK .
| | - David Price
- PerkinElmer, Inc. , Seer Green, Buckinghamshire , HP9 2FX , UK
| | - Paul Watson
- Elemental Scientific Instruments Ltd. , 73 Manchester Road, Warrington , WA1 4AE , UK
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Yarimizu K, Cruz-López R, Auerbach H, Heimann L, Schünemann V, Carrano CJ. Iron uptake and storage in the HAB dinoflagellate Lingulodinium polyedrum. Biometals 2017; 30:945-953. [PMID: 29067573 DOI: 10.1007/s10534-017-0061-7] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2017] [Accepted: 10/17/2017] [Indexed: 10/18/2022]
Abstract
The iron uptake and storage systems of terrestrial/higher plants are now reasonably well understood with two basic strategies being distinguished: Strategy I involves the induction of an Fe(III)-chelate reductase (ferrireductase) along with Fe(II) or Fe(III) transporter proteins while strategy II plants have evolved sophisticated systems based on high-affinity, iron specific, binding compounds called phytosiderophores. In contrast, there is little knowledge about the corresponding systems in marine, plant-like lineages. Herein we report a study of the iron uptake and storage mechanisms in the harmful algal bloom dinoflagellate Lingulodinium polyedrum. L. polyedrum is an armored dinoflagellate with a mixotrophic lifestyle and one of the most common bloom species on Southern California coast widely noted for its bioluminescent properties and as a producer of yessotoxins. Short term radio-iron uptake studies indicate that iron is taken up by L. polyedrum in a time dependent manner consistent with an active transport process. Based on inhibitor and other studies it appears that a reductive-oxidative pathway such as that found in yeast and the green alga Chlamydomonas reinhardtii is likely. Of the various iron sources tested vibrioferrin, a photoactive and relatively weak siderophore produced by potentially mutualistic Marinobacter bacterial species, was the most efficient. Other more stable and non-photoactive siderophores such as ferrioxamine E were ineffective. Several pieces of data including long term exposure to 57Fe using Mössbauer spectroscopy suggest that L. polyedrum does not possess an iron storage system but rather presumably relies on an efficient iron uptake system, perhaps mediated by mutualistic interactions with bacteria.
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Affiliation(s)
- Kyoko Yarimizu
- Department of Chemistry and Biochemistry, San Diego State University, San Diego, CA, 92182-1030, USA
| | - Ricardo Cruz-López
- Department of Biological Oceanography, Centro de Investigación Científica y de Educación Superior deEnsenada, Ensenada, BC, Mexico
| | - Hendrik Auerbach
- Department of Physics, University of Kaiserslautern, 67663, Kaiserslautern, Germany
| | - Larissa Heimann
- Department of Physics, University of Kaiserslautern, 67663, Kaiserslautern, Germany
| | - Volker Schünemann
- Department of Physics, University of Kaiserslautern, 67663, Kaiserslautern, Germany
| | - Carl J Carrano
- Department of Chemistry and Biochemistry, San Diego State University, San Diego, CA, 92182-1030, USA.
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Kovács K, Pechoušek J, Machala L, Zbořil R, Klencsár Z, Solti Á, Tóth B, Müller B, Pham HD, Kristóf Z, Fodor F. Revisiting the iron pools in cucumber roots: identification and localization. PLANTA 2016; 244:167-179. [PMID: 27002973 DOI: 10.1007/s00425-016-2502-x] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2016] [Accepted: 03/04/2016] [Indexed: 06/05/2023]
Abstract
Fe deficiency responses in Strategy I causes a shift from the formation of partially removable hydrous ferric oxide on the root surface to the accumulation of Fe-citrate in the xylem. Iron may accumulate in various chemical forms during its uptake and assimilation in roots. The permanent and transient Fe microenvironments formed during these processes in cucumber which takes up Fe in a reduction based process (Strategy I) have been investigated. The identification of Fe microenvironments was carried out with (57)Fe Mössbauer spectroscopy and immunoblotting, whereas reductive washing and high-resolution microscopy was applied for the localization. In plants supplied with (57)Fe(III)-citrate, a transient presence of Fe-carboxylates in removable forms and the accumulation of partly removable, amorphous hydrous ferric oxide/hydroxyde have been identified in the apoplast and on the root surface, respectively. The latter may at least partly be the consequence of bacterial activity at the root surface. Ferritin accumulation did not occur at optimal Fe supply. Under Fe deficiency, highly soluble ferrous hexaaqua complex is transiently formed along with the accumulation of Fe-carboxylates, likely Fe-citrate. As (57)Fe-citrate is non-removable from the root samples of Fe deficient plants, the major site of accumulation is suggested to be the root xylem. Reductive washing results in another ferrous microenvironment remaining in the root apoplast, the Fe(II)-bipyridyl complex, which accounts for ~30 % of the total Fe content of the root samples treated for 10 min and rinsed with CaSO4 solution. When (57)Fe(III)-EDTA or (57)Fe(III)-EDDHA was applied as Fe-source higher soluble ferrous Fe accumulation was accompanied by a lower total Fe content, confirming that chelates are more efficient in maintaining soluble Fe in the medium while less stable natural complexes as Fe-citrate may perform better in Fe accumulation.
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Affiliation(s)
- Krisztina Kovács
- Institute of Chemistry, Eötvös Loránd University, P.O. Box 32, Budapest, 1512, Hungary.
| | - Jiří Pechoušek
- Regional Centre of Advanced Technologies and Materials, Departments of Experimental Physics and Physical Chemistry, Faculty of Science, Palacký University in Olomouc, 771 46, Olomouc, Czech Republic
| | - Libor Machala
- Regional Centre of Advanced Technologies and Materials, Departments of Experimental Physics and Physical Chemistry, Faculty of Science, Palacký University in Olomouc, 771 46, Olomouc, Czech Republic
| | - Radek Zbořil
- Regional Centre of Advanced Technologies and Materials, Departments of Experimental Physics and Physical Chemistry, Faculty of Science, Palacký University in Olomouc, 771 46, Olomouc, Czech Republic
| | - Zoltán Klencsár
- Institute of Materials and Environmental Chemistry, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Magyar tudósok körútja 2, Budapest, 1117, Hungary
| | - Ádám Solti
- Department of Plant Physiology and Molecular Plant Biology, Institute of Biology, Eötvös Loránd University, Pázmány Péter lane 1/c, Budapest, 1117, Hungary
| | - Brigitta Tóth
- Department of Botany, Crop Physiology and Biotechnology, Institute of Plant Sciences, Faculty of Agricultural and Food Sciences and Environmental Management, University of Debrecen, 138 Böszörményi Str., Debrecen, 4032, Hungary
| | - Brigitta Müller
- Department of Plant Physiology and Molecular Plant Biology, Institute of Biology, Eötvös Loránd University, Pázmány Péter lane 1/c, Budapest, 1117, Hungary
| | - Hong Diep Pham
- Department of Plant Physiology and Molecular Plant Biology, Institute of Biology, Eötvös Loránd University, Pázmány Péter lane 1/c, Budapest, 1117, Hungary
| | - Zoltán Kristóf
- Department of Plant Anatomy, Institute of Biology, Eötvös Loránd University, Pázmány Péter lane 1/c, Budapest, 1117, Hungary
| | - Ferenc Fodor
- Department of Plant Physiology and Molecular Plant Biology, Institute of Biology, Eötvös Loránd University, Pázmány Péter lane 1/c, Budapest, 1117, Hungary
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Evidence for ferritin as dominant iron-bearing species in the rhizobacterium Azospirillum brasilense Sp7 provided by low-temperature/in-field Mössbauer spectroscopy. Anal Bioanal Chem 2016; 408:1565-71. [DOI: 10.1007/s00216-015-9264-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2015] [Revised: 12/03/2015] [Accepted: 12/09/2015] [Indexed: 10/22/2022]
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Iron reduction by the cyanobacterium Synechocystis sp. PCC 6803. Bioelectrochemistry 2015; 105:103-9. [PMID: 26079619 DOI: 10.1016/j.bioelechem.2015.05.015] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2015] [Revised: 05/21/2015] [Accepted: 05/31/2015] [Indexed: 11/22/2022]
Abstract
Synechocystis sp. PCC 6803 uptakes iron using a reductive mechanism, similar to that exhibited by many other microalgae. Various bio-electrochemical technologies have made use of this reductive cellular capacity, but there is still a lack of fundamental understanding of cellular reduction rates under different conditions. This study used electrochemical techniques to further investigate the reductive interactions of Synechocystis cells with Fe(III) from the iron species potassium ferricyanide, with varying cell and ferricyanide concentrations present. At the lowest cell concentrations tested, cell reduction machinery appeared to kinetically limit the reduction reaction, but ferricyanide reduction rates were mass transport controlled at the higher cell and ferricyanide concentrations studied. Improving the understanding of the reduction of Fe(III) by whole cyanobacterial cells is important for improving the efficiencies of technologies that rely on this interaction.
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Carmel N, Tel-Or E, Chen Y, Pick U. Iron uptake mechanism in the chrysophyte microalga Dinobryon. JOURNAL OF PLANT PHYSIOLOGY 2014; 171:993-997. [PMID: 24974325 DOI: 10.1016/j.jplph.2014.03.014] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/12/2013] [Revised: 03/29/2014] [Accepted: 03/31/2014] [Indexed: 06/03/2023]
Abstract
The mechanism of iron uptake in the chrysophyte microalga Dinobryon was studied. Previous studies have shown that iron is the dominant limiting elements for growth of Dinobryon in the Eshkol reservoir in northern Israel, which control its burst of bloom. It is demonstrated that Dinobryon has a light-stimulated ferrireductase activity, which is sensitive to the photosynthetic electron transport inhibitor DCMU and to the uncoupler CCCP. Iron uptake is also light-dependent, is inhibited by DCMU and by CCCP and also by the ferrous iron chelator BPDS. These results suggest that ferric iron reduction by ferrireductase is involved in iron uptake in Dinobryon and that photosynthesis provides the major reducing power to energize iron acquisition. Iron deprivation does not enhance but rather inhibits iron uptake contrary to observations in other algae.
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Affiliation(s)
- Nava Carmel
- Department of Agricultural Botany, The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, 76100 Rehovot, Israel
| | - Elisha Tel-Or
- Department of Agricultural Botany, The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, 76100 Rehovot, Israel.
| | - Yona Chen
- Department of Soil and Water Sciences, The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, 76100 Rehovot, Israel
| | - Uri Pick
- Department of Biological Chemistry, The Weizmann Institute of Science, Rehovot 76100, Israel.
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Mössbauer spectroscopic study of 57Fe metabolic transformations in the rhizobacterium Azospirillum brasilense Sp245. ACTA ACUST UNITED AC 2013. [DOI: 10.1007/s10751-013-0929-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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10
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Hartnett A, Böttger LH, Matzanke BF, Carrano CJ. Iron transport and storage in the coccolithophore: Emiliania huxleyi. Metallomics 2012; 4:1160-6. [PMID: 23011578 DOI: 10.1039/c2mt20144e] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Iron is an essential element for all living organisms due to its ubiquitous role in redox and other enzymes, especially in the context of respiration and photosynthesis. The iron uptake and storage systems of terrestrial/higher plants are now reasonably well understood with two basic strategies for iron uptake being distinguished: strategy I plants use a mechanism involving soil acidification and induction of Fe(III)-chelate reductase (ferrireductase) and Fe(II) transporter proteins while strategy II plants have evolved sophisticated systems based on high-affinity, iron specific, binding compounds called phytosiderophores. In contrast, there is little knowledge about the corresponding systems in marine plant-like lineages. Herein we report a study of the iron uptake and storage mechanisms in the coccolithophore Emiliania huxleyi. Short term radio-iron uptake studies indicate that iron is taken up by Emiliania in a time and concentration dependent manner consistent with an active transport process. Based on inhibitor studies it appears that iron is taken up directly as Fe(iii). However if a reductive step is involved the Fe(II) must not be accessible to the external environment. Upon long term exposure to (57)Fe we have been able, using a combination of Mössbauer and XAS spectroscopies, to identify a single metabolite which displays spectral features similar to the phosphorus-rich mineral core of bacterial and plant ferritins.
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Affiliation(s)
- Andrej Hartnett
- Department of Chemistry and Biochemistry, San Diego State University, San Diego CA, 92182-1030, USA
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