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Zhang G, Garrett DR, Luck SJ. Optimal filters for ERP research I: A general approach for selecting filter settings. Psychophysiology 2024; 61:e14531. [PMID: 38297978 PMCID: PMC11096084 DOI: 10.1111/psyp.14531] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2023] [Revised: 11/15/2023] [Accepted: 01/09/2024] [Indexed: 02/02/2024]
Abstract
Filtering plays an essential role in event-related potential (ERP) research, but filter settings are usually chosen on the basis of historical precedent, lab lore, or informal analyses. This reflects, in part, the lack of a well-reasoned, easily implemented method for identifying the optimal filter settings for a given type of ERP data. To fill this gap, we developed an approach that involves finding the filter settings that maximize the signal-to-noise ratio for a specific amplitude score (or minimizes the noise for a latency score) while minimizing waveform distortion. The signal is estimated by obtaining the amplitude score from the grand average ERP waveform (usually a difference waveform). The noise is estimated using the standardized measurement error of the single-subject scores. Waveform distortion is estimated by passing noise-free simulated data through the filters. This approach allows researchers to determine the most appropriate filter settings for their specific scoring methods, experimental designs, subject populations, recording setups, and scientific questions. We have provided a set of tools in ERPLAB Toolbox to make it easy for researchers to implement this approach with their own data.
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Affiliation(s)
- Guanghui Zhang
- Center for Mind & Brain, University of California-Davis, Davis, California, USA
| | - David R Garrett
- Center for Mind & Brain, University of California-Davis, Davis, California, USA
| | - Steven J Luck
- Center for Mind & Brain, University of California-Davis, Davis, California, USA
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Zhang G, Garrett DR, Luck SJ. Optimal Filters for ERP Research I: A General Approach for Selecting Filter Settings. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.05.25.542359. [PMID: 37292873 PMCID: PMC10245912 DOI: 10.1101/2023.05.25.542359] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Filtering plays an essential role in event-related potential (ERP) research, but filter settings are usually chosen on the basis of historical precedent, lab lore, or informal analyses. This reflects, in part, the lack of a well-reasoned, easily implemented method for identifying the optimal filter settings for a given type of ERP data. To fill this gap, we developed an approach that involves finding the filter settings that maximize the signal-to-noise ratio for a specific amplitude score (or minimizes the noise for a latency score) while minimizing waveform distortion. The signal is estimated by obtaining the amplitude score from the grand average ERP waveform (usually a difference waveform). The noise is estimated using the standardized measurement error of the single-subject scores. Waveform distortion is estimated by passing noise-free simulated data through the filters. This approach allows researchers to determine the most appropriate filter settings for their specific scoring methods, experimental designs, subject populations, recording setups, and scientific questions. We have provided a set of tools in ERPLAB Toolbox to make it easy for researchers to implement this approach with their own data.
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Affiliation(s)
- Guanghui Zhang
- Center for Mind & Brain, University of California-Davis, Davis, CA, USA
| | - David R Garrett
- Center for Mind & Brain, University of California-Davis, Davis, CA, USA
| | - Steven J Luck
- Center for Mind & Brain, University of California-Davis, Davis, CA, USA
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Abivardi A, Korn CW, Rojkov I, Gerster S, Hurlemann R, Bach DR. Acceleration of inferred neural responses to oddball targets in an individual with bilateral amygdala lesion compared to healthy controls. Sci Rep 2023; 13:14550. [PMID: 37667022 PMCID: PMC10477323 DOI: 10.1038/s41598-023-41357-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Accepted: 08/24/2023] [Indexed: 09/06/2023] Open
Abstract
Detecting unusual auditory stimuli is crucial for discovering potential threat. Locus coeruleus (LC), which coordinates attention, and amygdala, which is implicated in resource prioritization, both respond to deviant sounds. Evidence concerning their interaction, however, is sparse. Seeking to elucidate if human amygdala affects estimated LC activity during this process, we recorded pupillary responses during an auditory oddball and an illuminance change task, in a female with bilateral amygdala lesions (BG) and in n = 23 matched controls. Neural input in response to oddballs was estimated via pupil dilation, a reported proxy of LC activity, harnessing a linear-time invariant system and individual pupillary dilation response function (IRF) inferred from illuminance responses. While oddball recognition remained intact, estimated LC input for BG was compacted to an impulse rather than the prolonged waveform seen in healthy controls. This impulse had the earliest response mean and highest kurtosis in the sample. As a secondary finding, BG showed enhanced early pupillary constriction to darkness. These findings suggest that LC-amygdala communication is required to sustain LC activity in response to anomalous sounds. Our results provide further evidence for amygdala involvement in processing deviant sound targets, although it is not required for their behavioral recognition.
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Affiliation(s)
- Aslan Abivardi
- Computational Psychiatry Research, Department of Psychiatry, Psychotherapy and Psychosomatics, Psychiatric University Hospital Zurich, University of Zurich, 8032, Zurich, Switzerland.
- Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, OX3 9DU, UK.
| | - Christoph W Korn
- Section Social Neuroscience, Department of General Adult Psychiatry, Heidelberg University, 69115, Heidelberg, Germany
- Institute for Systems Neuroscience, University Medical Center Hamburg-Eppendorf, 20246, Hamburg, Germany
| | - Ivan Rojkov
- Computational Psychiatry Research, Department of Psychiatry, Psychotherapy and Psychosomatics, Psychiatric University Hospital Zurich, University of Zurich, 8032, Zurich, Switzerland
- Institute for Quantum Electronics, ETH Zurich, 8093, Zurich, Switzerland
| | - Samuel Gerster
- Computational Psychiatry Research, Department of Psychiatry, Psychotherapy and Psychosomatics, Psychiatric University Hospital Zurich, University of Zurich, 8032, Zurich, Switzerland
| | - Rene Hurlemann
- Department of Psychiatry, School of Medicine & Health Sciences, Carl von Ossietzky University of Oldenburg, 26160, Bad Zwischenahn, Germany
| | - Dominik R Bach
- Computational Psychiatry Research, Department of Psychiatry, Psychotherapy and Psychosomatics, Psychiatric University Hospital Zurich, University of Zurich, 8032, Zurich, Switzerland.
- Hertz Chair for Artificial Intelligence and Neuroscience, University of Bonn, 53012, Bonn, Germany.
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Mattes A, Porth E, Niessen E, Kummer K, Mück M, Stahl J. Larger error negativity peak amplitudes for accuracy versus speed instructions may reflect more neuro-cognitive alignment, not more intense error processing. Sci Rep 2023; 13:2259. [PMID: 36755038 PMCID: PMC9908975 DOI: 10.1038/s41598-023-29434-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2022] [Accepted: 02/03/2023] [Indexed: 02/10/2023] Open
Abstract
Understanding human error processing is a highly relevant interdisciplinary goal. More than 30 years of research in this field have established the error negativity (Ne) as a fundamental electrophysiological marker of various types of erroneous decisions (e.g. perceptual, economic) and related clinically relevant variations. A common finding is that the Ne is more pronounced when participants are instructed to focus on response accuracy rather than response speed, an observation that has been interpreted as reflecting more thorough error processing. We challenge this wide-spread interpretation by demonstrating that when controlling for the level of non-event-related noise in the participant-average waveform and for single-trial peak latency variability, the significant speed-accuracy difference in the participant-average waveform vanishes. This suggests that the previously reported Ne differences may be mostly attributable to a more precise alignment of neuro-cognitive processes and not (only) to more intense error processing under accuracy instructions, opening up novel perspectives on previous findings.
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Affiliation(s)
- André Mattes
- Department of Individual Differences and Psychological Assessment, University of Cologne, Pohligstraße 1, 50969, Köln, Germany.
| | - Elisa Porth
- Department of Individual Differences and Psychological Assessment, University of Cologne, Pohligstraße 1, 50969, Köln, Germany
| | - Eva Niessen
- Department of Individual Differences and Psychological Assessment, University of Cologne, Pohligstraße 1, 50969, Köln, Germany
| | - Kilian Kummer
- Department of Individual Differences and Psychological Assessment, University of Cologne, Pohligstraße 1, 50969, Köln, Germany
| | - Markus Mück
- Department of Individual Differences and Psychological Assessment, University of Cologne, Pohligstraße 1, 50969, Köln, Germany
| | - Jutta Stahl
- Department of Individual Differences and Psychological Assessment, University of Cologne, Pohligstraße 1, 50969, Köln, Germany
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