1
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Lemaire L, Desroches M, Krupa M, Mantegazza M. Idealized multiple-timescale model of cortical spreading depolarization initiation and pre-epileptic hyperexcitability caused by Na V1.1/SCN1A mutations. J Math Biol 2023; 86:92. [PMID: 37171678 DOI: 10.1007/s00285-023-01917-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2022] [Revised: 01/30/2023] [Accepted: 03/28/2023] [Indexed: 05/13/2023]
Abstract
NaV1.1 (SCN1A) is a voltage-gated sodium channel mainly expressed in GABAergic neurons. Loss of function mutations of NaV1.1 lead to epileptic disorders, while gain of function mutations cause a migraine in which cortical spreading depolarizations (CSDs) are involved. It is still debated how these opposite effects initiate two different manifestations of neuronal hyperactivity: epileptic seizures and CSD. To investigate this question, we previously built a conductance-based model of two neurons (GABAergic and pyramidal), with dynamic ion concentrations (Lemaire et al. in PLoS Comput Biol 17(7):e1009239, 2021. https://doi.org/10.1371/journal.pcbi.1009239 ). When implementing either NaV1.1 migraine or epileptogenic mutations, ion concentration modifications acted as slow processes driving the system to the corresponding pathological firing regime. However, the large dimensionality of the model complicated the exploitation of its implicit multi-timescale structure. Here, we substantially simplify our biophysical model to a minimal version more suitable for bifurcation analysis. The explicit timescale separation allows us to apply slow-fast theory, where slow variables are treated as parameters in the fast singular limit. In this setting, we reproduce both pathological transitions as dynamic bifurcations in the full system. In the epilepsy condition, we shift the spike-terminating bifurcation to lower inputs for the GABAergic neuron, to model an increased susceptibility to depolarization block. The resulting failure of synaptic inhibition triggers hyperactivity of the pyramidal neuron. In the migraine scenario, spiking-induced release of potassium leads to the abrupt increase of the extracellular potassium concentration. This causes a dynamic spike-terminating bifurcation of both neurons, which we interpret as CSD initiation.
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Affiliation(s)
- Louisiane Lemaire
- Inria at Université Côte d'Azur, MathNeuro Project-Team, Valbonne-Sophia Antipolis, France.
- Institute for Theoretical Biology, Humboldt-University of Berlin, Berlin, Germany.
- Bernstein Center for Computational Neuroscience, Berlin, Germany.
| | - Mathieu Desroches
- Inria at Université Côte d'Azur, MathNeuro Project-Team, Valbonne-Sophia Antipolis, France
| | - Martin Krupa
- Inria at Université Côte d'Azur, MathNeuro Project-Team, Valbonne-Sophia Antipolis, France
- Laboratoire Jean-Alexandre Dieudonné, Université Côte d'Azur, Nice, France
| | - Massimo Mantegazza
- Institute of Molecular and Cellular Pharmacology (IPMC), Université Côte d'Azur, Valbonne-Sophia Antipolis, France
- CNRS UMR7275, Institute of Molecular and Cellular Pharmacology (IPMC), Valbonne-Sophia Antipolis, France
- INSERM, Valbonne-Sophia Antipolis, France
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2
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John SR, Krauskopf B, Osinga HM, Rubin JE. Slow negative feedback enhances robustness of square-wave bursting. J Comput Neurosci 2023; 51:239-261. [PMID: 37067661 PMCID: PMC10181982 DOI: 10.1007/s10827-023-00846-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2022] [Revised: 01/17/2023] [Accepted: 02/15/2023] [Indexed: 04/18/2023]
Abstract
Square-wave bursting is an activity pattern common to a variety of neuronal and endocrine cell models that has been linked to central pattern generation for respiration and other physiological functions. Many of the reduced mathematical models that exhibit square-wave bursting yield transitions to an alternative pseudo-plateau bursting pattern with small parameter changes. This susceptibility to activity change could represent a problematic feature in settings where the release events triggered by spike production are necessary for function. In this work, we analyze how model bursting and other activity patterns vary with changes in a timescale associated with the conductance of a fast inward current. Specifically, using numerical simulations and dynamical systems methods, such as fast-slow decomposition and bifurcation and phase-plane analysis, we demonstrate and explain how the presence of a slow negative feedback associated with a gradual reduction of a fast inward current in these models helps to maintain the presence of spikes within the active phases of bursts. Therefore, although such a negative feedback is not necessary for burst production, we find that its presence generates a robustness that may be important for function.
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Affiliation(s)
- Sushmita Rose John
- Department of Mathematics, University of Pittsburgh, 301 Thackeray Hall, Pittsburgh, 15260, PA, USA
| | - Bernd Krauskopf
- Department of Mathematics, University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand
| | - Hinke M Osinga
- Department of Mathematics, University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand.
| | - Jonathan E Rubin
- Department of Mathematics, University of Pittsburgh, 301 Thackeray Hall, Pittsburgh, 15260, PA, USA.
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3
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Abstract
Bursting is one of the fundamental rhythms that excitable cells can generate either in response to incoming stimuli or intrinsically. It has been a topic of intense research in computational biology for several decades. The classification of bursting oscillations in excitable systems has been the subject of active research since the early 1980s and is still ongoing. As a by-product, it establishes analytical and numerical foundations for studying complex temporal behaviors in multiple timescale models of cellular activity. In this review, we first present the seminal works of Rinzel and Izhikevich in classifying bursting patterns of excitable systems. We recall a complementary mathematical classification approach by Bertram and colleagues, and then by Golubitsky and colleagues, which, together with the Rinzel-Izhikevich proposals, provide the state-of-the-art foundations to these classifications. Beyond classical approaches, we review a recent bursting example that falls outside the previous classification systems. Generalizing this example leads us to propose an extended classification, which requires the analysis of both fast and slow subsystems of an underlying slow-fast model and allows the dissection of a larger class of bursters. Namely, we provide a general framework for bursting systems with both subthreshold and superthreshold oscillations. A new class of bursters with at least 2 slow variables is then added, which we denote folded-node bursters, to convey the idea that the bursts are initiated or annihilated via a folded-node singularity. Key to this mechanism are so-called canard or duck orbits, organizing the underpinning excitability structure. We describe the 2 main families of folded-node bursters, depending upon the phase (active/spiking or silent/nonspiking) of the bursting cycle during which folded-node dynamics occurs. We classify both families and give examples of minimal systems displaying these novel bursting patterns. Finally, we provide a biophysical example by reinterpreting a generic conductance-based episodic burster as a folded-node burster, showing that the associated framework can explain its subthreshold oscillations over a larger parameter region than the fast subsystem approach. Bursting is ubiquitous in cellular excitable rhythms and comes in a plethora of patterns, both experimentally recorded and reproduced through models. As these different patterns may reflect different coding or information properties, it is therefore crucial to develop modeling frameworks that can both capture them and understand their characteristics. In this review, we propose a comprehensive account of the main bursting classification systems that have been developed over the past 40 years, together with recent developments allowing us to extend these classifications. Based upon bifurcation theory and heavily reliant on timescale separation, these schemes take full advantage of the fast subsystem analysis, obtained when slow variables are frozen and considered as bifurcation parameters. We complement this classical view by showing that nontrivial slow subsystem may also encode key informations important to classify bursting rhythms, due to the presence of so-called folded-node singularities. We provide minimal idealized models as well as one generic conductance-based example displaying bursting oscillations that require our extended classification in order to be fully characterized. We also highlight examples of biological data that could be suitably revisited with the lenses of this extended classifications and could lead to new models of complex cellular activity.
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Affiliation(s)
- Mathieu Desroches
- MathNeuro Team, Inria Sophia Antipolis Méditerranée Research Centre, Sophia Antipolis, France
- MCEN Team, Basque Centre for Applied Mathematics (BCAM), Bilbao, Bizkaia, Spain
- * E-mail: (MD); (SR)
| | - John Rinzel
- Center for Neural Science, New York University, New York, New York, United States of America
- Courant Institute for Mathematical Sciences, New York University, New York, New York, United States of America
| | - Serafim Rodrigues
- MCEN Team, Basque Centre for Applied Mathematics (BCAM), Bilbao, Bizkaia, Spain
- Ikerbasque, The Basque Science Foundation, Bilbao, Bizkaia, Spain
- * E-mail: (MD); (SR)
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4
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Boeri J, Meunier C, Le Corronc H, Branchereau P, Timofeeva Y, Lejeune FX, Mouffle C, Arulkandarajah H, Mangin JM, Legendre P, Czarnecki A. Two opposite voltage-dependent currents control the unusual early development pattern of embryonic Renshaw cell electrical activity. eLife 2021; 10:62639. [PMID: 33899737 PMCID: PMC8139835 DOI: 10.7554/elife.62639] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2020] [Accepted: 04/24/2021] [Indexed: 11/25/2022] Open
Abstract
Renshaw cells (V1R) are excitable as soon as they reach their final location next to the spinal motoneurons and are functionally heterogeneous. Using multiple experimental approaches, in combination with biophysical modeling and dynamical systems theory, we analyzed, for the first time, the mechanisms underlying the electrophysiological properties of V1R during early embryonic development of the mouse spinal cord locomotor networks (E11.5–E16.5). We found that these interneurons are subdivided into several functional clusters from E11.5 and then display an unexpected transitory involution process during which they lose their ability to sustain tonic firing. We demonstrated that the essential factor controlling the diversity of the discharge pattern of embryonic V1R is the ratio of a persistent sodium conductance to a delayed rectifier potassium conductance. Taken together, our results reveal how a simple mechanism, based on the synergy of two voltage-dependent conductances that are ubiquitous in neurons, can produce functional diversity in embryonic V1R and control their early developmental trajectory.
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Affiliation(s)
- Juliette Boeri
- INSERM, UMR_S 1130, CNRS, UMR 8246, Neuroscience Paris Seine, Institute of Biology Paris Seine, Sorbonne Univ, Paris, France
| | - Claude Meunier
- Centre de Neurosciences Intégratives et Cognition, CNRS UMR 8002, Institut Neurosciences et Cognition, Université de Paris, Paris, France
| | - Hervé Le Corronc
- INSERM, UMR_S 1130, CNRS, UMR 8246, Neuroscience Paris Seine, Institute of Biology Paris Seine, Sorbonne Univ, Paris, France.,Univ Angers, Angers, France
| | | | - Yulia Timofeeva
- Department of Computer Science and Centre for Complexity Science, University of Warwick, Coventry, United Kingdom.,Department of Clinical and Experimental Epilepsy, UCL Queen Square Institute of Neurology, University College London, London, United Kingdom
| | - François-Xavier Lejeune
- Institut du Cerveau et de la Moelle Epinière, Centre de Recherche CHU Pitié-Salpétrière, INSERM, U975, CNRS, UMR 7225, Sorbonne Univ, Paris, France
| | - Christine Mouffle
- INSERM, UMR_S 1130, CNRS, UMR 8246, Neuroscience Paris Seine, Institute of Biology Paris Seine, Sorbonne Univ, Paris, France
| | - Hervé Arulkandarajah
- INSERM, UMR_S 1130, CNRS, UMR 8246, Neuroscience Paris Seine, Institute of Biology Paris Seine, Sorbonne Univ, Paris, France
| | - Jean Marie Mangin
- INSERM, UMR_S 1130, CNRS, UMR 8246, Neuroscience Paris Seine, Institute of Biology Paris Seine, Sorbonne Univ, Paris, France
| | - Pascal Legendre
- INSERM, UMR_S 1130, CNRS, UMR 8246, Neuroscience Paris Seine, Institute of Biology Paris Seine, Sorbonne Univ, Paris, France
| | - Antonny Czarnecki
- INSERM, UMR_S 1130, CNRS, UMR 8246, Neuroscience Paris Seine, Institute of Biology Paris Seine, Sorbonne Univ, Paris, France.,Univ. Bordeaux, CNRS, EPHE, INCIA, Bordeaux, France
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5
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Erhardt AH, Mardal KA, Schreiner JE. Dynamics of a neuron-glia system: the occurrence of seizures and the influence of electroconvulsive stimuli : A mathematical and numerical study. J Comput Neurosci 2020; 48:229-251. [PMID: 32399790 PMCID: PMC7242278 DOI: 10.1007/s10827-020-00746-5] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2019] [Revised: 02/28/2020] [Accepted: 04/04/2020] [Indexed: 10/25/2022]
Abstract
In this paper, we investigate the dynamics of a neuron-glia cell system and the underlying mechanism for the occurrence of seizures. For our mathematical and numerical investigation of the cell model we will use bifurcation analysis and some computational methods. It turns out that an increase of the potassium concentration in the reservoir is one trigger for seizures and is related to a torus bifurcation. In addition, we will study potassium dynamics of the model by considering a reduced version and we will show how both mechanisms are linked to each other. Moreover, the reduction of the potassium leak current will also induce seizures. Our study will show that an enhancement of the extracellular potassium concentration, which influences the Nernst potential of the potassium current, may lead to seizures. Furthermore, we will show that an external forcing term (e.g. electroshocks as unidirectional rectangular pulses also known as electroconvulsive therapy) will establish seizures similar to the unforced system with the increased extracellular potassium concentration. To this end, we describe the unidirectional rectangular pulses as an autonomous system of ordinary differential equations. These approaches will explain the appearance of seizures in the cellular model. Moreover, seizures, as they are measured by electroencephalography (EEG), spread on the macro-scale (cm). Therefore, we extend the cell model with a suitable homogenised monodomain model, propose a set of (numerical) experiment to complement the bifurcation analysis performed on the single-cell model. Based on these experiments, we introduce a bidomain model for a more realistic modelling of white and grey matter of the brain. Performing similar (numerical) experiment as for the monodomain model leads to a suitable comparison of both models. The individual cell model, with its seizures explained in terms of a torus bifurcation, extends directly to corresponding results in both the monodomain and bidomain models where the neural firing spreads almost synchronous through the domain as fast traveling waves, for physiologically relevant paramenters.
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Affiliation(s)
- André H Erhardt
- Department of Mathematics, University of Oslo, P.O.Box 1053 Blindern, 0316, Oslo, Norway.
| | - Kent-Andre Mardal
- Department of Mathematics, University of Oslo, P.O.Box 1053 Blindern, 0316, Oslo, Norway.,Department of Computational Physiology, Simula Research Laboratory, 1325, Lysaker, Norway
| | - Jakob E Schreiner
- Department of Computational Physiology, Simula Research Laboratory, 1325, Lysaker, Norway.,Expert Analytics AS, Tordenskiolds gate 3, 0160, Oslo, Norway
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6
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Barrio R, Ibáñez S, Pérez L. Homoclinic organization in the Hindmarsh-Rose model: A three parameter study. CHAOS (WOODBURY, N.Y.) 2020; 30:053132. [PMID: 32491901 DOI: 10.1063/1.5138919] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2019] [Accepted: 04/24/2020] [Indexed: 06/11/2023]
Abstract
Bursting phenomena are found in a wide variety of fast-slow systems. In this article, we consider the Hindmarsh-Rose neuron model, where, as it is known in the literature, there are homoclinic bifurcations involved in the bursting dynamics. However, the global homoclinic structure is far from being fully understood. Working in a three-parameter space, the results of our numerical analysis show a complex atlas of bifurcations, which extends from the singular limit to regions where a fast-slow perspective no longer applies. Based on this information, we propose a global theoretical description. Surfaces of codimension-one homoclinic bifurcations are exponentially close to each other in the fast-slow regime. Remarkably, explained by the specific properties of these surfaces, we show how the Hindmarsh-Rose model exhibits isolas of homoclinic bifurcations when appropriate two-dimensional slices are considered in the three-parameter space. On the other hand, these homoclinic bifurcation surfaces contain curves corresponding to parameter values where additional degeneracies are exhibited. These codimension-two bifurcation curves organize the bifurcations associated with the spike-adding process and they behave like the "spines-of-a-book," gathering "pages" of bifurcations of periodic orbits. Depending on how the parameter space is explored, homoclinic phenomena may be absent or far away, but their organizing role in the bursting dynamics is beyond doubt, since the involved bifurcations are generated in them. This is shown in the global analysis and in the proposed theoretical scheme.
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Affiliation(s)
- Roberto Barrio
- Departamento de Matemática Aplicada and IUMA, University of Zaragoza, E-50009 Zaragoza, Spain
| | - Santiago Ibáñez
- Departamento de Matemáticas, University of Oviedo, E-33007 Oviedo, Spain
| | - Lucía Pérez
- Departamento de Matemáticas, University of Oviedo, E-33007 Oviedo, Spain
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7
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Köksal Ersöz E, Desroches M, Guillamon A, Rinzel J, Tabak J. Canard-induced complex oscillations in an excitatory network. J Math Biol 2020; 80:2075-2107. [PMID: 32266428 DOI: 10.1007/s00285-020-01490-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2019] [Revised: 03/25/2020] [Indexed: 10/24/2022]
Abstract
In Neuroscience, mathematical modelling involving multiple spatial and temporal scales can unveil complex oscillatory activity such as excitable responses to an input current, subthreshold oscillations, spiking or bursting. While the number of slow and fast variables and the geometry of the system determine the type of the complex oscillations, canard structures define boundaries between them. In this study, we use geometric singular perturbation theory to identify and characterise boundaries between different dynamical regimes in multiple-timescale firing rate models of the developing spinal cord. These rate models are either three or four dimensional with state variables chosen within an overall group of two slow and two fast variables. The fast subsystem corresponds to a recurrent excitatory network with fast activity-dependent synaptic depression, and the slow variables represent the cell firing threshold and slow activity-dependent synaptic depression, respectively. We start by demonstrating canard-induced bursting and mixed-mode oscillations in two different three-dimensional rate models. Then, in the full four-dimensional model we show that a canard-mediated slow passage creates dynamics that combine these complex oscillations and give rise to mixed-mode bursting oscillations (MMBOs). We unveil complicated isolas along which MMBOs exist in parameter space. The profile of solutions along each isola undergoes canard-mediated transitions between the sub-threshold regime and the bursting regime; these explosive transitions change the number of oscillations in each regime. Finally, we relate the MMBO dynamics to experimental recordings and discuss their effects on the silent phases of bursting patterns as well as their potential role in creating subthreshold fluctuations that are often interpreted as noise. The mathematical framework used in this paper is relevant for modelling multiple timescale dynamics in excitable systems.
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Affiliation(s)
- Elif Köksal Ersöz
- MathNeuro Team, Inria Sophia Antipolis Méditerranée, Valbonne, France. .,Université Côte d'Azur, Nice, France. .,LTSI-U1099, INSERM, 35000, Rennes, France.
| | - Mathieu Desroches
- MathNeuro Team, Inria Sophia Antipolis Méditerranée, Valbonne, France.,Université Côte d'Azur, Nice, France
| | - Antoni Guillamon
- Departament de Matemàtiques, Universitat Politècnica de Catalunya, Barcelona, Spain
| | - John Rinzel
- Center for Neural Science, New York University, New York, USA.,Courant Institute for Mathematical Sciences, New York University, New York, USA
| | - Joël Tabak
- University of Exeter Medical School, University of Exeter, Exeter, UK
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8
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Tlelo-Cuautle E, Díaz-Muñoz JD, González-Zapata AM, Li R, León-Salas WD, Fernández FV, Guillén-Fernández O, Cruz-Vega I. Chaotic Image Encryption Using Hopfield and Hindmarsh-Rose Neurons Implemented on FPGA. SENSORS (BASEL, SWITZERLAND) 2020; 20:E1326. [PMID: 32121310 PMCID: PMC7085708 DOI: 10.3390/s20051326] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Revised: 02/23/2020] [Accepted: 02/24/2020] [Indexed: 11/17/2022]
Abstract
Chaotic systems implemented by artificial neural networks are good candidates for data encryption. In this manner, this paper introduces the cryptographic application of the Hopfield and the Hindmarsh-Rose neurons. The contribution is focused on finding suitable coefficient values of the neurons to generate robust random binary sequences that can be used in image encryption. This task is performed by evaluating the bifurcation diagrams from which one chooses appropriate coefficient values of the mathematical models that produce high positive Lyapunov exponent and Kaplan-Yorke dimension values, which are computed using TISEAN. The randomness of both the Hopfield and the Hindmarsh-Rose neurons is evaluated from chaotic time series data by performing National Institute of Standard and Technology (NIST) tests. The implementation of both neurons is done using field-programmable gate arrays whose architectures are used to develop an encryption system for RGB images. The success of the encryption system is confirmed by performing correlation, histogram, variance, entropy, and Number of Pixel Change Rate (NPCR) tests.
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Affiliation(s)
- Esteban Tlelo-Cuautle
- Department of Electronics, INAOE, Puebla 72840, Mexico; (J.D.D.-M.); (A.M.G.-Z.); (O.G.-F.); (I.C.-V.)
| | | | | | - Rui Li
- School of Automation Engineering, UESTC, Chengdu 611731, China;
| | - Walter Daniel León-Salas
- School of Engineering Technology, Purdue University, 401 N. Grant St., West Lafayette, IN 47907, USA;
| | - Francisco V. Fernández
- Instituto de Microelectrónica de Sevilla, CSIC and Universidad de Sevilla, 41092 Sevilla, Spain;
| | - Omar Guillén-Fernández
- Department of Electronics, INAOE, Puebla 72840, Mexico; (J.D.D.-M.); (A.M.G.-Z.); (O.G.-F.); (I.C.-V.)
| | - Israel Cruz-Vega
- Department of Electronics, INAOE, Puebla 72840, Mexico; (J.D.D.-M.); (A.M.G.-Z.); (O.G.-F.); (I.C.-V.)
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9
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Mondal A, Upadhyay RK, Ma J, Yadav BK, Sharma SK, Mondal A. Bifurcation analysis and diverse firing activities of a modified excitable neuron model. Cogn Neurodyn 2019; 13:393-407. [PMID: 31354884 DOI: 10.1007/s11571-019-09526-z] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2018] [Revised: 12/27/2018] [Accepted: 02/20/2019] [Indexed: 11/29/2022] Open
Abstract
Electrical activities of excitable cells produce diverse spiking-bursting patterns. The dynamics of the neuronal responses can be changed due to the variations of ionic concentrations between outside and inside the cell membrane. We investigate such type of spiking-bursting patterns under the effect of an electromagnetic induction on an excitable neuron model. The effect of electromagnetic induction across the membrane potential can be considered to analyze the collective behavior for signal processing. The paper addresses the issue of the electromagnetic flow on a modified Hindmarsh-Rose model (H-R) which preserves biophysical neurocomputational properties of a class of neuron models. The different types of firing activities such as square wave bursting, chattering, fast spiking, periodic spiking, mixed-mode oscillations etc. can be observed using different injected current stimulus. The improved version of the model includes more parameter sets and the multiple electrical activities are exhibited in different parameter regimes. We perform the bifurcation analysis analytically and numerically with respect to the key parameters which reveals the properties of the fast-slow system for neuronal responses. The firing activities can be suppressed/enhanced using the different external stimulus current and by allowing a noise induced current. To study the electrical activities of neural computation, the improved neuron model is suitable for further investigation.
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Affiliation(s)
- Argha Mondal
- 1Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand 826004 India.,2Computational Neuroscience Center, University of Washington, Seattle, USA
| | - Ranjit Kumar Upadhyay
- 1Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand 826004 India
| | - Jun Ma
- 3Department of Physics, Lanzhou University of Technology, Lanzhou, 730050 People's Republic of China
| | - Binesh Kumar Yadav
- 1Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand 826004 India
| | - Sanjeev Kumar Sharma
- 1Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand 826004 India
| | - Arnab Mondal
- 1Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad, Jharkhand 826004 India
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10
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Abstract
Excitable biological cells, such as cardiac muscle cells, can exhibit complex patterns of oscillations such as spiking and bursting. Moreover, it is well known that an enhancement in calcium currents may yield certain kind of cardiac arrhythmia, so-called early afterdepolarisations (EADs). The presence of EADs strongly correlates with the onset of dangerous cardiac arrhythmia. In this paper we study mathematically and numerically the dynamics of a cardiac muscle cell with respect to the calcium current by investigating a simplistic system of differential equations. For the study of this phenomena, we use bifurcation theory, numerical bifurcation analysis, geometric singular perturbation theory and computational methods to investigate a nonlinear multiple time scales system. It will turn out that EADs related to an enhanced calcium current are canard–induced and that we have to combine these theories to derive a better understanding of the dynamics behind EADs. Moreover, a suitable time scale separation argument determines the important and sensitive system parameters which are related to the occurrence of EADs.
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11
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Mondal A, Upadhyay RK, Mondal A, Sharma SK. Dynamics of a modified excitable neuron model: Diffusive instabilities and traveling wave solutions. CHAOS (WOODBURY, N.Y.) 2018; 28:113104. [PMID: 30501216 DOI: 10.1063/1.5048119] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2018] [Accepted: 10/12/2018] [Indexed: 06/09/2023]
Abstract
We examine the dynamics of a spatially extended excitable neuron model between phase state and stable/unstable equilibrium point depending on the parameter regimes. The solitary wave profiles in the excitable medium are characterized by an improved Hindmarsh-Rose (H-R) spiking-bursting neuron model with an injected decaying current function. Linear stability and the nature of deterministic system dynamics are analyzed. Further investigation for the existence of wave using the reaction-diffusion H-R system and the criteria for diffusion-driven instabilities are performed. An approximation method is introduced to analyze traveling wave profiles for the oscillatory neuron model that allows the explicit analytical treatment of both the speed equations and shape of the traveling wave solution. The solitary wave profiles exhibited by the system are explored. The analytical expression for the solution scheme is validated with good accuracy in a wide range of the biophysical parameters of the system. The traveling wave fronts and speed equations control the variations of the information transmission, and the speed of signal transmission may be affected by the injection of certain drugs.
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Affiliation(s)
- Argha Mondal
- Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Ranjit Kumar Upadhyay
- Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Arnab Mondal
- Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
| | - Sanjeev Kumar Sharma
- Department of Applied Mathematics, Indian Institute of Technology (Indian School of Mines), Dhanbad 826004, India
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12
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Han X, Wei M, Bi Q, Kurths J. Obtaining amplitude-modulated bursting by multiple-frequency slow parametric modulation. Phys Rev E 2018; 97:012202. [PMID: 29448416 DOI: 10.1103/physreve.97.012202] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2017] [Indexed: 06/08/2023]
Abstract
Amplitude-modulated bursting (AMB), characterized by oscillations appearing in the envelope of the active phase of bursting, is a novel class of bursting rhythms reported recently. The present paper aims to report a simple and effective method, i.e., the multiple-frequency slow parametric modulation (MFSPM) method, for obtaining such a bursting pattern. We show that the MFSPM can be well controlled so that it may exhibit multiple continuous ups and downs in the active area. Then, the amplitude of the traced active state alternates between increases and decreases accordingly, which leads to oscillations in the envelope of the active phase, and AMB is thus created. Based on this, the route to AMB by the MFSPM is presented. The validity of the approach is demonstrated by several examples. The proposed approach does not depend on specific systems or bifurcations and thus is a general method.
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Affiliation(s)
- Xiujing Han
- Faculty of Civil Engineering and Mechanics, Jiangsu University, Zhenjiang Jiangsu 212013, People's Republic of China
| | - Mengke Wei
- Faculty of Civil Engineering and Mechanics, Jiangsu University, Zhenjiang Jiangsu 212013, People's Republic of China
| | - Qinsheng Bi
- Faculty of Civil Engineering and Mechanics, Jiangsu University, Zhenjiang Jiangsu 212013, People's Republic of China
| | - Jürgen Kurths
- Department of Physics, Humboldt University, Berlin 12489, Germany
- Potsdam Institute for Climate Impact Research, Potsdam 14473, Germany
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13
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Ryashko L, Slepukhina E. Noise-induced torus bursting in the stochastic Hindmarsh-Rose neuron model. Phys Rev E 2017; 96:032212. [PMID: 29346914 DOI: 10.1103/physreve.96.032212] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2017] [Indexed: 06/07/2023]
Abstract
We study the phenomenon of noise-induced torus bursting on the base of the three-dimensional Hindmarsh-Rose neuron model forced by additive noise. We show that in the parametric zone close to the Neimark-Sacker bifurcation, where the deterministic system exhibits rapid tonic spiking oscillations, random disturbances can turn tonic spiking into bursting, which is characterized by the formation of a peculiar dynamical structure resembling that of a torus. This phenomenon is confirmed by the changes in dispersion of random trajectories as well as the power spectral density and interspike intervals statistics. In particular, we show that as noise increases, the system undergoes P and D bifurcations, transitioning from order to chaos. We ultimately characterize the transition from stochastic (tonic) spiking to bursting by stochastic sensitivity functions.
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Affiliation(s)
- Lev Ryashko
- Institute of Natural Sciences and Mathematics, Ural Federal University, Lenina 51, Ekaterinburg, Russia
| | - Evdokia Slepukhina
- Institute of Natural Sciences and Mathematics, Ural Federal University, Lenina 51, Ekaterinburg, Russia
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14
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Reimbayev R, Daley K, Belykh I. When two wrongs make a right: synchronized neuronal bursting from combined electrical and inhibitory coupling. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2017; 375:rsta.2016.0282. [PMID: 28507227 PMCID: PMC5434073 DOI: 10.1098/rsta.2016.0282] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 03/08/2017] [Indexed: 05/24/2023]
Abstract
Synchronized cortical activities in the central nervous systems of mammals are crucial for sensory perception, coordination and locomotory function. The neuronal mechanisms that generate synchronous synaptic inputs in the neocortex are far from being fully understood. In this paper, we study the emergence of synchronization in networks of bursting neurons as a highly non-trivial, combined effect of electrical and inhibitory connections. We report a counterintuitive find that combined electrical and inhibitory coupling can synergistically induce robust synchronization in a range of parameters where electrical coupling alone promotes anti-phase spiking and inhibition induces anti-phase bursting. We reveal the underlying mechanism, which uses a balance between hidden properties of electrical and inhibitory coupling to act together to synchronize neuronal bursting. We show that this balance is controlled by the duty cycle of the self-coupled system which governs the synchronized bursting rhythm.This article is part of the themed issue 'Mathematical methods in medicine: neuroscience, cardiology and pathology'.
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Affiliation(s)
- Reimbay Reimbayev
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, GA 30303, USA
| | - Kevin Daley
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, GA 30303, USA
| | - Igor Belykh
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, GA 30303, USA
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15
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Vo T, Kramer MA, Kaper TJ. Amplitude-Modulated Bursting: A Novel Class of Bursting Rhythms. PHYSICAL REVIEW LETTERS 2016; 117:268101. [PMID: 28059538 DOI: 10.1103/physrevlett.117.268101] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2016] [Indexed: 06/06/2023]
Abstract
We report on the discovery of a novel class of bursting rhythms, called amplitude-modulated bursting (AMB), in a model for intracellular calcium dynamics. We find that these rhythms are robust and exist on open parameter sets. We develop a new mathematical framework with broad applicability to detect, classify, and rigorously analyze AMB. Here we illustrate this framework in the context of AMB in a model of intracellular calcium dynamics. In the process, we discover a novel family of singularities, called toral folded singularities, which are the organizing centers for the amplitude modulation and exist generically in slow-fast systems with two or more slow variables.
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Affiliation(s)
- Theodore Vo
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts 02215, USA
| | - Mark A Kramer
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts 02215, USA
| | - Tasso J Kaper
- Department of Mathematics and Statistics, Boston University, Boston, Massachusetts 02215, USA
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16
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Study on electrical synapse coupling synchronization of Hindmarsh-Rose neurons under Gaussian white noise. Neural Comput Appl 2016. [DOI: 10.1007/s00521-016-2681-1] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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17
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Fletcher P, Bertram R, Tabak J. From global to local: exploring the relationship between parameters and behaviors in models of electrical excitability. J Comput Neurosci 2016; 40:331-45. [PMID: 27033230 DOI: 10.1007/s10827-016-0600-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2015] [Revised: 03/02/2016] [Accepted: 03/07/2016] [Indexed: 01/25/2023]
Abstract
Models of electrical activity in excitable cells involve nonlinear interactions between many ionic currents. Changing parameters in these models can produce a variety of activity patterns with sometimes unexpected effects. Further more, introducing new currents will have different effects depending on the initial parameter set. In this study we combined global sampling of parameter space and local analysis of representative parameter sets in a pituitary cell model to understand the effects of adding K (+) conductances, which mediate some effects of hormone action on these cells. Global sampling ensured that the effects of introducing K (+) conductances were captured across a wide variety of contexts of model parameters. For each type of K (+) conductance we determined the types of behavioral transition that it evoked. Some transitions were counterintuitive, and may have been missed without the use of global sampling. In general, the wide range of transitions that occurred when the same current was applied to the model cell at different locations in parameter space highlight the challenge of making accurate model predictions in light of cell-to-cell heterogeneity. Finally, we used bifurcation analysis and fast/slow analysis to investigate why specific transitions occur in representative individual models. This approach relies on the use of a graphics processing unit (GPU) to quickly map parameter space to model behavior and identify parameter sets for further analysis. Acceleration with modern low-cost GPUs is particularly well suited to exploring the moderate-sized (5-20) parameter spaces of excitable cell and signaling models.
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Affiliation(s)
- Patrick Fletcher
- Currently at the Laboratory of Biological Modeling, National Institutes of Health, Bethesda, MD, 20892, USA
| | - Richard Bertram
- Department of Mathematics, Florida State University, Tallahassee, FL, 32306, USA.
| | - Joel Tabak
- Currently at the University of Exeter Medical School, Biomedical Neuroscience Research Group, EX4 4PS, Exeter, UK
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18
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Belykh I, Reimbayev R, Zhao K. Synergistic effect of repulsive inhibition in synchronization of excitatory networks. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2015; 91:062919. [PMID: 26172784 DOI: 10.1103/physreve.91.062919] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2014] [Indexed: 06/04/2023]
Abstract
We show that the addition of pairwise repulsive inhibition to excitatory networks of bursting neurons induces synchrony, in contrast to one's expectations. Through stability analysis, we reveal the mechanism underlying this purely synergistic phenomenon and demonstrate that it originates from the transition between different types of bursting, caused by excitatory-inhibitory synaptic coupling. This effect is generic and observed in different models of bursting neurons and fast synaptic interactions. We also find a universal scaling law for the synchronization stability condition for large networks in terms of the number of excitatory and inhibitory inputs each neuron receives, regardless of the network size and topology. This general law is in sharp contrast with linearly coupled networks with positive (attractive) and negative (repulsive) coupling where the placement and structure of negative connections heavily affect synchronization.
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Affiliation(s)
- Igor Belykh
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, Georgia 30303, USA
| | - Reimbay Reimbayev
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, Georgia 30303, USA
| | - Kun Zhao
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, Georgia 30303, USA
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19
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Wu K, Luo T, Lu H, Wang Y. Bifurcation study of neuron firing activity of the modified Hindmarsh–Rose model. Neural Comput Appl 2015. [DOI: 10.1007/s00521-015-1892-1] [Citation(s) in RCA: 33] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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20
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Osinga HM, Tsaneva-Atanasova KT. Geometric analysis of transient bursts. CHAOS (WOODBURY, N.Y.) 2013; 23:046107. [PMID: 24387586 DOI: 10.1063/1.4826655] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
We consider the effect of a brief stimulation from the rest state of a minimal neuronal model with multiple time scales. Such transient dynamics brings out the intrinsic bursting capabilities of the system. Our main goal is to show that a minimum of three dimensions is enough to generate spike-adding phenomena in transient responses, and that the onset of a new spike can be tracked using existing continuation packages. We take a geometric approach to illustrate how the underlying fast subsystem organises the spike adding in much the same way as for spike adding in periodic bursts, but the bifurcation analysis for spike onset is entirely different. By using a generic model, we further strengthen claims made in our earlier work that our numerical method for spike onset can be used for a broad class of systems.
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Affiliation(s)
- Hinke M Osinga
- Department of Mathematics, the University of Auckland, Private Bag 92019, Auckland 1142, New Zealand
| | - Krasimira T Tsaneva-Atanasova
- College of Engineering, Mathematics and Physical Sciences, University of Exeter, North Park Road, Exeter EX4 4QF, United Kingdom
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21
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Desroches M, Kaper TJ, Krupa M. Mixed-mode bursting oscillations: dynamics created by a slow passage through spike-adding canard explosion in a square-wave burster. CHAOS (WOODBURY, N.Y.) 2013; 23:046106. [PMID: 24387585 DOI: 10.1063/1.4827026] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
This article concerns the phenomenon of Mixed-Mode Bursting Oscillations (MMBOs). These are solutions of fast-slow systems of ordinary differential equations that exhibit both small-amplitude oscillations (SAOs) and bursts consisting of one or multiple large-amplitude oscillations (LAOs). The name MMBO is given in analogy to Mixed-Mode Oscillations, which consist of alternating SAOs and LAOs, without the LAOs being organized into burst events. In this article, we show how MMBOs are created naturally in systems that have a spike-adding bifurcation or spike-adding mechanism, and in which the dynamics of one (or more) of the slow variables causes the system to pass slowly through that bifurcation. Canards are central to the dynamics of MMBOs, and their role in shaping the MMBOs is two-fold: saddle-type canards are involved in the spike-adding mechanism of the underlying burster and permit one to understand the number of LAOs in each burst event, and folded-node canards arise due to the slow passage effect and control the number of SAOs. The analysis is carried out for a prototypical fourth-order system of this type, which consists of the third-order Hindmarsh-Rose system, known to have the spike-adding mechanism, and in which one of the key bifurcation parameters also varies slowly. We also include a discussion of the MMBO phenomenon for the Morris-Lecar-Terman system. Finally, we discuss the role of the MMBOs to a biological modeling of secreting neurons.
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Affiliation(s)
- Mathieu Desroches
- INRIA Paris-Rocquencourt Research Centre, MYCENAE Project-Team, Domaine de Voluceau, Rocquencourt BP 105, 78153 Le Chesnay cedex, France
| | - Tasso J Kaper
- Department of Mathematics and Statistics, Center for BioDynamics, Boston University, 111 Cummington Mall, Boston, Massachusetts 02215, USA
| | - Martin Krupa
- INRIA Paris-Rocquencourt Research Centre, MYCENAE Project-Team, Domaine de Voluceau, Rocquencourt BP 105, 78153 Le Chesnay cedex, France
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22
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Abbasian AH, Fallah H, Razvan MR. Symmetric bursting behaviors in the generalized FitzHugh-Nagumo model. BIOLOGICAL CYBERNETICS 2013; 107:465-476. [PMID: 23801268 DOI: 10.1007/s00422-013-0559-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2012] [Accepted: 05/16/2013] [Indexed: 06/02/2023]
Abstract
In the current paper, we have investigated the generalized FitzHugh-Nagumo model. We have shown that symmetric bursting behaviors of different types could be observed in this model with an appropriate recovery term. A modified version of this system is used to construct bursting activities. Furthermore, we have shown some numerical examples of delayed Hopf bifurcation and canard phenomenon in the symmetric bursting of super-Hopf/homoclinic type near its super-Hopf and homoclinic bifurcations, respectively.
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Affiliation(s)
- A H Abbasian
- School of Mathematics, Institute for Research in Fundamental Sciences (IPM), P.O. Box: 19395-5746, Tehran, Iran
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23
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A geometric understanding of how fast activating potassium channels promote bursting in pituitary cells. J Comput Neurosci 2013; 36:259-78. [DOI: 10.1007/s10827-013-0470-8] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2013] [Revised: 04/25/2013] [Accepted: 05/29/2013] [Indexed: 12/13/2022]
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24
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Nowacki J, Osinga HM, Tsaneva-Atanasova KT. Continuation-Based Numerical Detection of After-Depolarization and Spike-Adding Thresholds. Neural Comput 2013; 25:877-900. [DOI: 10.1162/neco_a_00425] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
The changes in neuronal firing pattern are signatures of brain function, and it is of interest to understand how such changes evolve as a function of neuronal biophysical properties. We address this important problem by the analysis and numerical investigation of a class of mechanistic mathematical models. We focus on a hippocampal pyramidal neuron model and study the occurrence of bursting related to the after-depolarization (ADP) that follows a brief current injection. This type of burst is a transient phenomenon that is not amenable to the classical bifurcation analysis done, for example, for periodic bursting oscillators. In this letter, we show how to formulate such transient behavior as a two-point boundary value problem (2PBVP), which can be solved using well-known continuation methods. The 2PBVP is formulated such that the transient response is represented by a finite orbit segment for which onsets of ADP and additional spikes in a burst can be detected as bifurcations during a one-parameter continuation. This in turn provides us with a direct method to approximate the boundaries of regions in a two-parameter plane where certain model behavior of interest occurs. More precisely, we use two-parameter continuation of the detected onset points to identify the boundaries between regions with and without ADP and bursts with different numbers of spikes. Our 2PBVP formulation is a novel approach to parameter sensitivity analysis that can be applied to a wide range of problems.
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Affiliation(s)
| | - Hinke M. Osinga
- Department of Mathematics, University of Auckland, Auckland 1142, New Zealand
| | - Krasimira T. Tsaneva-Atanasova
- Bristol Centre for Applied Nonlinear Mathematics, Department of Engineering Mathematics, University of Bristol, Bristol BS8 1TR, U.K
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25
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Temperature-dependent transitions of burst firing patterns in a model pyramidal neuron. NEUROPHYSIOLOGY+ 2012. [DOI: 10.1007/s11062-012-9296-7] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
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26
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Nowacki J, Osinga HM, Tsaneva-Atanasova K. Dynamical systems analysis of spike-adding mechanisms in transient bursts. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2012; 2:7. [PMID: 22655748 PMCID: PMC3497719 DOI: 10.1186/2190-8567-2-7] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/24/2011] [Accepted: 02/13/2012] [Indexed: 05/03/2023]
Abstract
Transient bursting behaviour of excitable cells, such as neurons, is a common feature observed experimentally, but theoretically, it is not well understood. We analyse a five-dimensional simplified model of after-depolarisation that exhibits transient bursting behaviour when perturbed with a short current injection. Using one-parameter continuation of the perturbed orbit segment formulated as a well-posed boundary value problem, we show that the spike-adding mechanism is a canard-like transition that has a different character from known mechanisms for periodic burst solutions. The biophysical basis of the model gives a natural time-scale separation, which allows us to explain the spike-adding mechanism using geometric singular perturbation theory, but it does not involve actual bifurcations as for periodic bursts. We show that unstable sheets of the critical manifold, formed by saddle equilibria of the system that only exist in a singular limit, are responsible for the spike-adding transition; the transition is organised by the slow flow on the critical manifold near folds of this manifold. Our analysis shows that the orbit segment during the spike-adding transition includes a fast transition between two unstable sheets of the slow manifold that are of saddle type. We also discuss a different parameter regime where the presence of additional saddle equilibria of the full system alters the spike-adding mechanism.
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Affiliation(s)
- Jakub Nowacki
- Bristol Centre for Applied Nonlinear Mathematics, Department of Engineering Mathematics, University of Bristol, Queen’s Building, University Walk, Bristol, BS8 1TR, United Kingdom
| | - Hinke M Osinga
- Department of Mathematics, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand
| | - Krasimira Tsaneva-Atanasova
- Bristol Centre for Applied Nonlinear Mathematics, Department of Engineering Mathematics, University of Bristol, Queen’s Building, University Walk, Bristol, BS8 1TR, United Kingdom
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27
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González-Miranda JM. Nonlinear dynamics of the membrane potential of a bursting pacemaker cell. CHAOS (WOODBURY, N.Y.) 2012; 22:013123. [PMID: 22462999 DOI: 10.1063/1.3687017] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
This article presents the results of an exploration of one two-parameter space of the Chay model of a cell excitable membrane. There are two main regions: a peripheral one, where the system dynamics will relax to an equilibrium point, and a central one where the expected dynamics is oscillatory. In the second region, we observe a variety of self-sustained oscillations including periodic oscillation, as well as bursting dynamics of different types. These oscillatory dynamics can be observed as periodic oscillations with different periodicities, and in some cases, as chaotic dynamics. These results, when displayed in bifurcation diagrams, result in complex bifurcation structures, which have been suggested as relevant to understand biological cell signaling.
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Affiliation(s)
- J M González-Miranda
- Departamento de Física Fundamental, Universidad de Barcelona, Av. Diagonal 647, 08028 Barcelona, Spain
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28
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Burke J, Desroches M, Barry AM, Kaper TJ, Kramer MA. A showcase of torus canards in neuronal bursters. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2012; 2:3. [PMID: 22657918 PMCID: PMC3496470 DOI: 10.1186/2190-8567-2-3] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2011] [Accepted: 02/21/2012] [Indexed: 05/03/2023]
Abstract
Rapid action potential generation - spiking - and alternating intervals of spiking and quiescence - bursting - are two dynamic patterns commonly observed in neuronal activity. In computational models of neuronal systems, the transition from spiking to bursting often exhibits complex bifurcation structure. One type of transition involves the torus canard, which we show arises in a broad array of well-known computational neuronal models with three different classes of bursting dynamics: sub-Hopf/fold cycle bursting, circle/fold cycle bursting, and fold/fold cycle bursting. The essential features that these models share are multiple time scales leading naturally to decomposition into slow and fast systems, a saddle-node of periodic orbits in the fast system, and a torus bifurcation in the full system. We show that the transition from spiking to bursting in each model system is given by an explosion of torus canards. Based on these examples, as well as on emerging theory, we propose that torus canards are a common dynamic phenomenon separating the regimes of spiking and bursting activity.
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Affiliation(s)
- John Burke
- Department of Mathematics and Statistics, Center for BioDynamics, Boston University, Boston, MA, 02215, USA
| | - Mathieu Desroches
- Department of Engineering Mathematics, University of Bristol, Bristol, UK
| | - Anna M Barry
- Department of Mathematics and Statistics, Center for BioDynamics, Boston University, Boston, MA, 02215, USA
| | - Tasso J Kaper
- Department of Mathematics and Statistics, Center for BioDynamics, Boston University, Boston, MA, 02215, USA
| | - Mark A Kramer
- Department of Mathematics and Statistics, Center for BioDynamics, Boston University, Boston, MA, 02215, USA
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29
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Vo T, Bertram R, Wechselberger M. Bifurcations of canard-induced mixed mode oscillations in a pituitary Lactotroph model. ACTA ACUST UNITED AC 2012. [DOI: 10.3934/dcds.2012.32.2879] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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30
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Osinga HM, Sherman A, Tsaneva-Atanasova K. CROSS-CURRENTS BETWEEN BIOLOGY AND MATHEMATICS: THE CODIMENSION OF PSEUDO-PLATEAU BURSTING. ACTA ACUST UNITED AC 2012; 32:2853-2877. [PMID: 22984340 DOI: 10.3934/dcds.2012.32.2853] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
A great deal of work has gone into classifying bursting oscillations, periodic alternations of spiking and quiescence modeled by fast-slow systems. In such systems, one or more slow variables carry the fast variables through a sequence of bifurcations that mediate transitions between oscillations and steady states. A rigorous classification approach is to characterize the bifurcations found in the neighborhood of a singularity; a measure of the complexity of the bursting oscillation is then given by the smallest codimension of the singularities near which it occurs. Fold/homoclinic bursting, along with most other burst types of interest, has been shown to occur near a singularity of codimension three by examining bifurcations of a cubic Liénard system; hence, these types of bursting have at most codimension three. Modeling and biological considerations suggest that fold/homoclinic bursting should be found near fold/subHopf bursting, a more recently identified burst type whose codimension has not been determined yet. One would expect that fold/subHopf bursting has the same codimension as fold/homoclinic bursting, because models of these two burst types have very similar underlying bifurcation diagrams. However, no codimension-three singularity is known that supports fold/subHopf bursting, which indicates that it may have codimension four. We identify a three-dimensional slice in a partial unfolding of a doubly-degenerate Bodganov-Takens point, and show that this codimension-four singularity gives rise to almost all known types of bursting.
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Affiliation(s)
- Hinke M Osinga
- Bristol Centre for Applied Nonlinear Mathematics Department of Engineering Mathematics University of Bristol, Queen's Building, University Walk Bristol BS8 1TR, UK
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31
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32
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Teka W, Tabak J, Vo T, Wechselberger M, Bertram R. The dynamics underlying pseudo-plateau bursting in a pituitary cell model. JOURNAL OF MATHEMATICAL NEUROSCIENCE 2011; 1. [PMID: 22268000 PMCID: PMC3261773 DOI: 10.1186/2190-8567-1-12] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Pituitary cells of the anterior pituitary gland secrete hormones in response to patterns of electrical activity. Several types of pituitary cells produce short bursts of electrical activity which are more effective than single spikes in evoking hormone release. These bursts, called pseudo-plateau bursts, are unlike bursts studied mathematically in neurons (plateau bursting) and the standard fast-slow analysis used for plateau bursting is of limited use. Using an alternative fast-slow analysis, with one fast and two slow variables, we show that pseudo-plateau bursting is a canard-induced mixed mode oscillation. Using this technique, it is possible to determine the region of parameter space where bursting occurs as well as salient properties of the burst such as the number of spikes in the burst. The information gained from this one-fast/two-slow decomposition complements the information obtained from a two-fast/one-slow decomposition.
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Affiliation(s)
- Wondimu Teka
- Department of Mathematics; Florida State University, Tallahassee, FL, USA
| | - Joël Tabak
- Department of Biological Science; Florida State University, Tallahassee, FL, USA
| | - Theodore Vo
- School of Mathematics and Statistics; University of Sydney, Sydney, NSW, Australia
| | - Martin Wechselberger
- School of Mathematics and Statistics; University of Sydney, Sydney, NSW, Australia
| | - Richard Bertram
- Department of Mathematics, and Programs in Neuroscience and Molecular Biophysics; Florida State University, Tallahassee, FL, USA
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33
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Burst firing transitions in two-compartment pyramidal neuron induced by the perturbation of membrane capacitance. Neurol Sci 2011; 33:595-604. [PMID: 22037696 DOI: 10.1007/s10072-011-0819-6] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2011] [Accepted: 10/06/2011] [Indexed: 10/15/2022]
Abstract
Neuronal membrane capacitance C (m) is one of the prominent factors in action potential initiation and propagation and then influences the firing patterns of neurons. Exploring the roles that C (m) plays in different firing patterns can facilitate the understanding of how different factors might influence neuronal firing behaviors. However, the impacts of variations in C (m) on neuronal firing patterns have been only partly explored until now. In this study, the influence of C (m) on burst firing behaviors of a two-compartment pyramidal neuron (including somatic compartment and dendritic compartment) was investigated by means of computer simulation, the value of C (m) in each compartment was denoted as C (m,s) and C (m,d), respectively. Two cases were considered, in the first case, we let C (m,s) =C (m,d), and then changed them simultaneously. While in the second case, we assumed C (m,s) ≠C (m,d), and then changed them, respectively. From the simulation results obtained from these two cases, it was found that the variation of C (m) in the somatic compartment and the dendritic compartment show much difference, simulated results obtained from the variation of C (m,d) have much more similarities than that of C (m,s) when comparing with the results obtained in the first case under which C (m,s) =C (m,d). These different effects of C (m,s) and C (m,d) on neuronal firing behaviors may result from the different topology and functional roles of soma and dendrites. Numerical results demonstrated in this paper may give us some inspiration in understanding the possible roles of C (m) in burst firing patterns, especially their transitions in compartmental neurons.
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Aslanidi O, Atia J, Benson A, van den Berg H, Blanks A, Choi C, Gilbert S, Goryanin I, Hayes-Gill B, Holden A, Li P, Norman J, Shmygol A, Simpson N, Taggart M, Tong W, Zhang H. Towards a computational reconstruction of the electrodynamics of premature and full term human labour. PROGRESS IN BIOPHYSICS AND MOLECULAR BIOLOGY 2011; 107:183-92. [DOI: 10.1016/j.pbiomolbio.2011.07.004] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2011] [Accepted: 07/05/2011] [Indexed: 01/02/2023]
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Affiliation(s)
- Arthur Sherman
- Mathematical Research Branch, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, MD 20892, USA. sherman@helix.nih.govtivation
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Abstract
We present a mathematical analysis of the dynamics that underlies plateau bursting in models of endocrine cells under variation of the location of the (unstable) equilibrium around which these bursting patterns are organised. We focus primarily on the less well-studied case of pseudo-plateau bursting, but also consider the square-wave case. The behaviour of such models is explained using the theory for systems with multiple time scales and it is well known that the underlying so-called fast subsystem organises their dynamics. However, such results are valid only in a sufficiently small neighbourhood of the singular limit that defines the fast subsystem. Hence, the slow variable (intracellular calcium concentration) must be very slow, which is actually not the case for pseudo-plateau bursting. Furthermore, the theoretical predictions are also only valid for parameter values such that the equilibrium is close to a homoclinic bifurcation occuring in the fast subsystem. In the present study, we use numerical explorations to discuss what happens outside this theoretically known neighbourhood of parameter space. In particular, we consider what happens as the equilibrium moves outside a small neighbourhood of the homoclinic bifurcation that occurs in the fast subsystem, and relatively fast speeds are allowed for the slow variable which is controlled by a relatively large value of a parameter ε. The results obtained complement our earlier work [Tsaneva-Atanasova et al. (2010) J Theor Biol264, 1133-1146], which focussed on how the bursting patterns vary with the rate of change ε of the slow variable: we fix ε and move the equilibrium over the full range of the bursting regime. Our findings show that the transitions between different bursting patterns are rather similar for square-wave and pseudo-plateau bursting, provided that the value of ε for the pseudo-plateau-bursting model is chosen so that it is much larger than for the square-wave bursting model. Furthermore, the two families of tonic spiking and plateau bursting, which are generally viewed as two separately generated families, are actually connected into a single family in the two-parameter plane through branches of unstable periodic orbits.
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Affiliation(s)
- H M Osinga
- Bristol Centre for Applied Nonlinear Mathematics, Department of Engineering Mathematics, University of Bristol, Bristol, UK.
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