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Nielsen SS, Alvarez J, Bicout DJ, Calistri P, Canali E, Drewe JA, Garin‐Bastuji B, Gonzales Rojas JL, Schmidt G, Herskin M, Michel V, Miranda Chueca MÁ, Mosbach‐Schulz O, Padalino B, Roberts HC, Stahl K, Velarde A, Viltrop A, Winckler C, Edwards S, Ivanova S, Leeb C, Wechsler B, Fabris C, Lima E, Mosbach‐Schulz O, Van der Stede Y, Vitali M, Spoolder H. Welfare of pigs on farm. EFSA J 2022; 20:e07421. [PMID: 36034323 PMCID: PMC9405538 DOI: 10.2903/j.efsa.2022.7421] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022] Open
Abstract
This scientific opinion focuses on the welfare of pigs on farm, and is based on literature and expert opinion. All pig categories were assessed: gilts and dry sows, farrowing and lactating sows, suckling piglets, weaners, rearing pigs and boars. The most relevant husbandry systems used in Europe are described. For each system, highly relevant welfare consequences were identified, as well as related animal-based measures (ABMs), and hazards leading to the welfare consequences. Moreover, measures to prevent or correct the hazards and/or mitigate the welfare consequences are recommended. Recommendations are also provided on quantitative or qualitative criteria to answer specific questions on the welfare of pigs related to tail biting and related to the European Citizen's Initiative 'End the Cage Age'. For example, the AHAW Panel recommends how to mitigate group stress when dry sows and gilts are grouped immediately after weaning or in early pregnancy. Results of a comparative qualitative assessment suggested that long-stemmed or long-cut straw, hay or haylage is the most suitable material for nest-building. A period of time will be needed for staff and animals to adapt to housing lactating sows and their piglets in farrowing pens (as opposed to crates) before achieving stable welfare outcomes. The panel recommends a minimum available space to the lactating sow to ensure piglet welfare (measured by live-born piglet mortality). Among the main risk factors for tail biting are space allowance, types of flooring, air quality, health status and diet composition, while weaning age was not associated directly with tail biting in later life. The relationship between the availability of space and growth rate, lying behaviour and tail biting in rearing pigs is quantified and presented. Finally, the panel suggests a set of ABMs to use at slaughter for monitoring on-farm welfare of cull sows and rearing pigs.
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Banerjee P, Carmelo VAO, Kadarmideen HN. Genome-Wide Epistatic Interaction Networks Affecting Feed Efficiency in Duroc and Landrace Pigs. Front Genet 2020; 11:121. [PMID: 32184802 PMCID: PMC7058701 DOI: 10.3389/fgene.2020.00121] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2019] [Accepted: 01/31/2020] [Indexed: 12/12/2022] Open
Abstract
Interactions among genomic loci have often been overlooked in genome-wide association studies, revealing the combinatorial effects of variants on phenotype or disease manifestation. Unexplained genetic variance, interactions among causal genes of small effects, and biological pathways could be identified using a network biology approach. The main objective of this study was to determine the genome-wide epistatic variants affecting feed efficiency traits [feed conversion ratio (FCR) and residual feed intake (RFI)] based on weighted interaction SNP hub (WISH-R) method. Herein, we detected highly interconnected epistatic SNP modules, pathways, and potential biomarkers for the FCR and RFI in Duroc and Landrace purebreds considering the whole population, and separately for low and high feed efficient groups. Highly interacting SNP modules in Duroc (1,247 SNPs) and Landrace (1,215 SNPs) across the population and for low feed efficient (Duroc-80 SNPs, Landrace-146 SNPs) and high feed efficient group (Duroc-198 SNPs, Landrace-232 SNPs) for FCR and RFI were identified. Gene and pathway analyses identified ABL1, MAP3K4, MAP3K5, SEMA6A, KITLG, and KAT2B from chromosomes 1, 2, 5, and 13 underlying ErbB, Ras, Rap1, thyroid hormone, axon guidance pathways in Duroc. GABBR2, GNA12, and PRKCG genes from chromosomes 1, 3, and 6 pointed towards thyroid hormone, cGMP-PKG and cAMP pathways in Landrace. From Duroc low feed efficient group, the TPK1 gene was found involved with thiamine metabolism, whereas PARD6G, DLG2, CRB1 were involved with the hippo signaling pathway in high feed efficient group. PLOD1 and SETD7 genes were involved with lysine degradation in low feed efficient group in Landrace, while high feed efficient group pointed to genes underpinning valine, leucine, isoleucine degradation, and fatty acid elongation. Some SNPs and genes identified are known for their association with feed efficiency, others are novel and potentially provide new avenues for further research. Further validation of epistatic SNPs and genes identified here in a larger cohort would help to establish a framework for modelling epistatic variance in future methods of genomic prediction, increasing the accuracy of estimated genetic merit for FE and helping the pig breeding industry.
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Affiliation(s)
- Priyanka Banerjee
- Quantitative Genomics, Bioinformatics and Computational Biology Group, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark
| | - Victor Adriano Okstoft Carmelo
- Quantitative Genomics, Bioinformatics and Computational Biology Group, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark
| | - Haja N Kadarmideen
- Quantitative Genomics, Bioinformatics and Computational Biology Group, Department of Applied Mathematics and Computer Science, Technical University of Denmark, Kongens Lyngby, Denmark
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Hartnett P, Boyle L, Younge B, O'Driscoll K. The Effect of Group Composition and Mineral Supplementation during Rearing on Measures of Cartilage Condition and Bone Mineral Density in Replacement Gilts. Animals (Basel) 2019; 9:E637. [PMID: 31480340 PMCID: PMC6770507 DOI: 10.3390/ani9090637] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2019] [Revised: 08/08/2019] [Accepted: 08/20/2019] [Indexed: 12/02/2022] Open
Abstract
Lameness is a major cause of poor longevity and poor welfare in replacement gilts. The problem is exacerbated by inappropriate housing and diet during the rearing period. Replacement gilts are often reared with male finisher pigs destined for slaughter. If they are not castrated, they perform high levels of potentially injurious sexual and aggressive behaviour. Furthermore, finisher pig diets are not designed to meet the needs of developing gilts and may not supply the necessary minerals to support good limb health. The objective of this study was to evaluate the effect of supplementing the diet of replacement gilts with copper, zinc and manganese and separating them from males during the rearing period on locomotory ability, bone mineral density and cartilage lesion scores. A 2 × 2 factorial design experiment investigated the effect of female-only or mixed-sex rearing, with or without supplementary minerals (Copper, Zinc and Manganese). In total, 384 maternal line gilts were assigned to 32 pens of 12 and were locomotion scored during the rearing period. A sub-sample (n = 102) of gilts were culled at breeding age and the front right limb was removed at slaughter. Areal bone mineral density (aBMD) was measured using dual energy X-ray absorptiometry, after which the limb was dissected to score the condition of the cartilage. The addition of trace minerals to the diet resulted in increased aBMD in the humerus (P < 0.05) compared to the control diet. Rearing gilts in female-only groups reduced the number of cartilage lesions overall (P < 0.05), and on the humeral condyle (P < 0.05). Rearing replacement gilts in female-only groups and with mineral supplementation had benefits for limb health.
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Affiliation(s)
- Phoebe Hartnett
- Teagasc Pig Development Department, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork P61 P302, Ireland.
- Department of Biological Sciences, University of Limerick, Limerick V94 T9PX, Ireland.
| | - Laura Boyle
- Teagasc Pig Development Department, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork P61 P302, Ireland
| | - Bridget Younge
- Department of Biological Sciences, University of Limerick, Limerick V94 T9PX, Ireland
| | - Keelin O'Driscoll
- Teagasc Pig Development Department, Animal & Grassland Research and Innovation Centre, Moorepark, Fermoy, Co. Cork P61 P302, Ireland
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A Monosodium Iodoacetate Osteoarthritis Lameness Model in Growing Pigs. Animals (Basel) 2019; 9:ani9070405. [PMID: 31266184 PMCID: PMC6680622 DOI: 10.3390/ani9070405] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2019] [Revised: 06/28/2019] [Accepted: 06/28/2019] [Indexed: 12/12/2022] Open
Abstract
Lameness is a common problem in pigs, causing welfare issues in affected pigs and economic losses for farmers. It is often caused by osteoarthrosis (OA) in its acute or chronic form. We assessed face and construct validity of a potential model for naturally-occurring OA and its progression to chronic OA. Such a model would allow the assessment of possible interventions. Monosodium-iodoacetate (MIA) or isotonic saline was deposited in the intercarpal joint of 20 growing pigs. Functional effects were assessed using subjective (visual lameness scoring) and objective (kinetic gait analysis) techniques at several timepoints. Structural effects were assessed by histopathology at 68 days. Eight out of 10 MIA treated animals had histopathological OA lesions confirmed in the target joint, while for all saline treated animals the target joint was judged to be normal. Pressure mat analysis revealed increased asymmetric weight bearing in these animals compared to the control group on day 3, 14, 28 and 56. Visual scoring only showed a difference between groups on day 1. MIA did not cause prolonged visible lameness, thus face validity for OA under field conditions was not entirely met. Since objective gait parameters showed decreased weightbearing as a behavioral expression of pain, it may be used as a general model for movement-induced pain in pigs.
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Do DN, Strathe AB, Jensen J, Mark T, Kadarmideen HN. Genetic parameters for different measures of feed efficiency and related traits in boars of three pig breeds. J Anim Sci 2013; 91:4069-79. [PMID: 23825329 DOI: 10.2527/jas.2012-6197] [Citation(s) in RCA: 71] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Residual feed intake (RFI) is commonly used as a measure of feed efficiency at a given level of production. A total of 16,872 pigs with their pedigree traced back as far as possible was used to estimate genetic parameters for RFI, growth performance, food conversion ratio (FCR), body conformation, and feeding behavior traits in 3 Danish breeds [Duroc (DD), Landrace (LL), and Yorkshire (YY)]. Two measures of RFI were considered: residual feed intake 1 (RFI1) was calculated based on regression of daily feed intake (DFI) from 30 to 100 kg on initial test weight and ADG from 30 to 100 kg (ADG2). Residual feed intake 2 (RFI2) was as RFI1, except it was also regressed with respect to backfat (BF). The estimated heritabilities for RFI1 and RFI2 were 0.34 and 0.38 in DD, 0.34 and 0.36 in LL, and 0.39 and 0.40 in YY, respectively. The heritabilities ranged from 0.32 (DD) to 0.54 (LL) for ADG2, from 0.54 (DD) to 0.67 (LL) for BF, and from 0.13 (DD) to 0.19 (YY) for body conformation. Feeding behavior traits including DFI, number of visits to feeder per day (NVD), total time spent eating per day (TPD), feed intake rate (FR), feed intake per visit (FPV), and time spent eating per visit (TPV) were moderately to highly heritable. Residual feed intake 2 was genetically independent of ADG2 and BF in all breeds, except it had low genetic correlation to ADG2 in YY (0.2). Residual feed intake 1 was also genetically independent of ADG2 in DD and LL. Both RFI traits had strong genetic correlations with DFI (0.85 to 0.96) and FCR (0.76 to 0.99). They had low or no genetic correlations with feeding behavior traits. Unfavorable genetic correlations were found between ADG2 and both BF and DFI. Among feeding behavior traits, DFI had low genetic correlations to other traits in all breeds. High and negative genetic correlations were also found between TPD with FR (-0.79 in YY to -0.88 in DD), NVD, and TPD (-0.91 in DD to -0.94 in YY) and between NVD and FPV (-0.83 in DD to -0.91 in YY) in all breeds. The genetic trend for feed efficiency was favorable in all breeds regardless of the definition of feed efficiency used. In summary, RFI1 and RFI2 were heritable and selection for reduced RFI2 can be performed without adversely affecting ADG and BF and could replace FCR in the selection index for the Danish pig breeds. Selection could also be based on RFI1 for breeds with fewer concerns about a negative effect of BF or for breeds that do not have BF records.
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Affiliation(s)
- D N Do
- Department of Veterinary Clinical and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen, 1870 Frederiksberg C, Denmark
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Jensen T, Kristensen H, Toft N. Quantifying the impact of lameness on welfare and profitability of finisher pigs using expert opinions. Livest Sci 2012. [DOI: 10.1016/j.livsci.2012.07.013] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
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Association between lean meat percentage and average daily weight gain in Danish slaughter pigs. Prev Vet Med 2011; 101:121-3. [DOI: 10.1016/j.prevetmed.2010.12.003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2010] [Revised: 12/03/2010] [Accepted: 12/04/2010] [Indexed: 11/20/2022]
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Stege H, Bagger J, Nielsen J, Ersbøll A. Effect of breeding strategy and feeding system on the within-herd variation of lean meat percents in Danish slaughter pigs. Prev Vet Med 2011; 101:73-8. [DOI: 10.1016/j.prevetmed.2011.05.002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2010] [Revised: 04/26/2011] [Accepted: 05/03/2011] [Indexed: 12/01/2022]
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A cross-sectional study of the prevalence of lameness in finishing pigs, gilts and pregnant sows and associations with limb lesions and floor types on commercial farms in England. Anim Welf 2009. [DOI: 10.1017/s0962728600000464] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/04/2023]
Abstract
AbstractThe prevalence and risks for abnormal gait in finishing pigs (Sus scrofa), gilts and pregnant sows from a representative cross-section of indoor and outdoor herds in the United Kingdom were investigated. The prevalence of abnormal gait in finishing pigs, maiden gilts, pregnant gilts and pregnant sows from 88 herds was 19.7, 11.8, 14.4 and 16.9%, respectively. In a multivariable analysis of 98 herds, there was an increased risk of abnormal gait in pregnant sows housed on slatted floors compared with pregnant sows housed on solid concrete floors with straw bedding or sows housed outdoors on soil. The lowest prevalence of abnormal gait in finishing pigs occurred in pigs housed outdoors (3.4 vs 19.7% in indoor-housed finishing pigs) however, the difference was not significant because only three farms in the study housed finishing pigs outdoors. In indoor-housed finishing pigs, there was an increased risk of abnormal gait in pigs housed on solid concrete floors with sparse bedding, partly-slatted floors or fully-slatted floors compared with those housed on solid concrete floors with deep bedding in all areas. However, there were no significant associations between floor type and abnormal gait in gilts. There was an increased risk of abnormal gait associated with increasing callus, bursitis and capped hock score on the limbs of finishing pigs. This might have occurred because limb lesions cause discomfort or because lame pigs spend more time lying and this increases the risk of limb lesions developing.
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Jensen TB, Kristensen AR, Toft N, Baadsgaard NP, Østergaard S, Houe H. An object-oriented Bayesian network modeling the causes of leg disorders in finisher herds. Prev Vet Med 2009; 89:237-48. [PMID: 19303155 DOI: 10.1016/j.prevetmed.2009.02.009] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2008] [Revised: 01/05/2009] [Accepted: 02/16/2009] [Indexed: 10/21/2022]
Abstract
The implementation of an effective control strategy against disease in a finisher herd requires knowledge regarding the disease level in the herd. A Bayesian network was constructed that can estimate risk indexes for three cause-categories of leg disorders in a finisher herd. The cause-categories of leg disorders were divided into infectious causes (arthritis caused by infectious pathogens), physical causes (e.g. fracture and claw lesions), and inherited causes (osteochondrosis). Information about the herd (e.g. the herd size, floor type and number of suppliers) and information about individual pigs (e.g. results from diagnostic tests) were used to estimate the most likely cause of leg disorders at herd level. As information to the model originated from two different levels, we used an object-oriented structure in order to ease the specification of the Bayesian network. Hence, a Herd class and a Pig class comprised the basic components of the object-oriented structure. The causal structure of the model was based on evidence from published literature. The conditional probabilities used in the model were elicited from experts within the field and from the published literature. To illustrate the behaviour of the model, we investigated the value of different levels of evidence in two fictitious herds with different herd characteristics related to the risk of leg disorders (e.g. purchase policy, production type and the stocking density in pens). The model enabled us to demonstrate the value of performing systematic collection of additional information (i.e. clinical, pathological and bacteriological examination) when identifying causes of leg disorders at herd level.
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Affiliation(s)
- Tina Birk Jensen
- Department of Large Animal Sciences, Faculty of Life Sciences, University of Copenhagen, Groennegaardsvej 2, 1870 Frederiksberg C. Copenhagen, Denmark.
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The association between disease and profitability in individual finishing boars at a test station. Livest Sci 2008. [DOI: 10.1016/j.livsci.2007.12.003] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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