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Zhang Z, Yi L, Hu Y, Liu N, Ren L. Submarine groundwater discharge and ocean acidification: Implications from China's coastal waters. MARINE POLLUTION BULLETIN 2024; 201:116252. [PMID: 38479328 DOI: 10.1016/j.marpolbul.2024.116252] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Revised: 03/07/2024] [Accepted: 03/08/2024] [Indexed: 04/07/2024]
Abstract
Ocean acidification (OA) is a global environmental concern, and submarine groundwater discharge (SGD) is a potentially process that enhances OA. This review summarizes the relationship between two types of constituents carried by SGD into China's seawater and OA. 1) Current research predominantly concentrates on constituent fluxes from SGD, neglecting its ecological impacts on carbon and nutrients budgets, as well as the mechanisms between carbon and nutrients. 2) Uncertainties persist in SGD research methods and acidification characterization. 3) There's a need to enhance quantitative research methods of SGD-OA, particularly in areas with intricate biogeochemical processes. Effective identification methods are crucial to quantify SGD's contribution to OA. Investigating core scientific questions, including SGD's impact on OA rates and scales, is paramount. While the primary focus is on SGD-OA research in China, insights gained from novel perspectives could have broader value for coastal management globally.
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Affiliation(s)
- Zhe Zhang
- College of Environmental Science and Engineering, Nankai University, Tianjin 300350, PR China
| | - Lixin Yi
- College of Environmental Science and Engineering, Nankai University, Tianjin 300350, PR China.
| | - Yubin Hu
- Institute of Marine Science and Technology, Shandong University, Qingdao 266237, PR China
| | - Nan Liu
- College of Water Resources and Hydropower Engineering, North China Electric Power University, Beijing 102206, PR China
| | - Lu Ren
- College of Environment Science and Engineering, Beijing Forestry University, Beijing 100083, PR China
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2
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Han T, Liao X, Guo Z, Chen JY, He C, Lu Z. Comparative transcriptome analysis reveals deep molecular landscapes in stony coral Montipora clade. Front Genet 2023; 14:1297483. [PMID: 38028626 PMCID: PMC10662330 DOI: 10.3389/fgene.2023.1297483] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/20/2023] [Accepted: 10/25/2023] [Indexed: 12/01/2023] Open
Abstract
Introduction: Coral reefs, among the most invaluable ecosystems in the world, face escalating threats from climate change and anthropogenic activities. To decipher the genetic underpinnings of coral adaptation and resilience, we undertook comprehensive transcriptome profiling of two emblematic coral species, Montipora foliosa and Montipora capricornis, leveraging PacBio Iso-Seq technology. These species were strategically selected for their ecological significance and their taxonomic proximity within the Anthozoa class. Methods: Our study encompassed the generation of pristine transcriptomes, followed by thorough functional annotation via diverse databases. Subsequently, we quantified transcript abundance and scrutinized gene expression patterns, revealing notable distinctions between the two species. Results: Intriguingly, shared orthologous genes were identified across a spectrum of coral species, highlighting a substantial genetic conservation within scleractinian corals. Importantly, a subset of genes, integral to biomineralization processes, emerged as exclusive to scleractinian corals, shedding light on their intricate evolutionary history. Furthermore, we discerned pronounced upregulation of genes linked to immunity, stress response, and oxidative-reduction processes in M. foliosa relative to M. capricornis. These findings hint at the presence of more robust mechanisms in M. foliosa for maintaining internal equilibrium and effectively navigating external challenges, underpinning its potential ecological advantage. Beyond elucidating genetic adaptation in corals, our research underscores the urgency of preserving genetic diversity within coral populations. Discussion: These insights hold promise for informed conservation strategies aimed at safeguarding these imperiled ecosystems, bearing ecological and economic significance. In synthesis, our study seamlessly integrates genomic inquiry with ecological relevance, bridging the gap between molecular insights and the imperative to conserve coral reefs in the face of mounting threats.
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Affiliation(s)
- Tingyu Han
- State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, China
| | - Xin Liao
- Guangxi Key Lab of Mangrove Conservation and Utilization, Guangxi Mangrove Research Center, Beihai, China
| | - Zhuojun Guo
- State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, China
| | - J.-Y. Chen
- Nanjing Institute of Geology and Paleontology, Nanjing, China
| | - Chunpeng He
- State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, China
| | - Zuhong Lu
- State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, Nanjing, China
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Manullang C, Singh T, Sakai K, Miyagi A, Iwasaki A, Nojiri Y, Iguchi A. Separate and combined effects of elevated pCO 2 and temperature on the branching reef corals Acropora digitifera and Montipora digitata. MARINE ENVIRONMENTAL RESEARCH 2023; 188:106030. [PMID: 37267662 DOI: 10.1016/j.marenvres.2023.106030] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Revised: 05/18/2023] [Accepted: 05/22/2023] [Indexed: 06/04/2023]
Abstract
Ocean acidification (OA) and warming (OW) are major global threats to coral reef ecosystems; however, studies on their combined effects (OA + OW) are scarce. Therefore, we evaluated the effects of OA, OW, and OA + OW in the branching reef corals Acropora digitifera and Montipora digitata, which have been found to respond differently to environmental changes. Our results indicate that OW has a greater impact on A. digitifera and M. digitata than OA and that the former species is more vulnerable to OW than the latter. OW was the main stressor for increased mortality and decreased calcification in the OA + OW group, and the effect of OA + OW was additive in both species. Our findings suggest that the relative abundance and cover of M. digitata are expected to increase whereas those of A. digitifera may decrease in the near future in Okinawa.
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Affiliation(s)
- Cristiana Manullang
- Sesoko Station, Tropical Biosphere Research Center, University of the Ryukyus, Motobu, Okinawa, Japan
| | - Tanya Singh
- Sesoko Station, Tropical Biosphere Research Center, University of the Ryukyus, Motobu, Okinawa, Japan
| | - Kazuhiko Sakai
- Sesoko Station, Tropical Biosphere Research Center, University of the Ryukyus, Motobu, Okinawa, Japan.
| | - Aika Miyagi
- Department of Bioresources Engineering, National Institute of Technology, Okinawa College, Nago-City, Okinawa, Japan
| | - Aiko Iwasaki
- Asamushi Research Center for Marine Biology, Graduate School of Life Sciences, Tohoku University, Aomori, Aomori, Japan
| | - Yukihiro Nojiri
- Center for Global Environmental Research, National Institute for Environmental Studies, Tsukuba, Ibaraki, Japan; Graduate School of Earth and Environmental Sciences, Hirosaki University, Hirosaki, Aomori, Japan
| | - Akira Iguchi
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki, Japan; Research Laboratory on Environmentally-conscious Developments and Technologies [E-code], National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki, Japan
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Gibu K, Ikeuchi E, Bell T, Nakamura T, Yoshioka Y, Suzuki A, Iguchi A. Calcification rates of a massive and a branching coral species were unrelated to diversity of endosymbiotic dinoflagellates. Mol Biol Rep 2022; 49:9101-9106. [PMID: 35737176 DOI: 10.1007/s11033-022-07702-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2022] [Accepted: 06/10/2022] [Indexed: 11/27/2022]
Abstract
BACKGROUND To explore the possibility that endosymbiotic dinoflagellates (Symbiodiniaceae) are associated with coral calcification rates, we investigated the diversity of symbiotic algae in coral colonies with different calcification rates within massive and branching corals (Porites australiensis and Acropora digitifera). METHODS AND RESULTS Genotyping symbiotic algae from colonies with different calcification rates revealed that all the colonies of both species harbored mainly Cladocopium (previously clade C of Symbiodinium). The Cladocopium symbionts in P. australiensis were mainly composed of C15 and C15bn, and those in A. digitifera of C50a and C50c. We did not detect clear relationships between symbiont compositions and calcification rates within the two coral species. CONCLUSIONS Our results suggest that different coral calcification rates within species may be attributed to genetic factors of coral hosts themselves and/or within symbiont genotypes.
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Affiliation(s)
- Kodai Gibu
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8567, Japan
| | - Eri Ikeuchi
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8567, Japan
| | - Tomoko Bell
- Water and Environmental Research Institute, University of Guam, UOG Station, Mangilao, GU, 96923, USA
| | - Takashi Nakamura
- Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa, 903-0213, Japan
| | - Yuki Yoshioka
- Department of Bioresources Engineering, National Institute of Technology, Okinawa College, 905, Henoko, Nago, Okinawa, 905-2192, Japan
| | - Atsushi Suzuki
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8567, Japan.,Research Laboratory On Environmentally-Conscious Developments and Technologies [E-Code], National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, 305-8567, Japan
| | - Akira Iguchi
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology (AIST), 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8567, Japan. .,Research Laboratory On Environmentally-Conscious Developments and Technologies [E-Code], National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, 305-8567, Japan.
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Godefroid M, Dupont S, Metian M, Hédouin L. Two decades of seawater acidification experiments on tropical scleractinian corals: Overview, meta-analysis and perspectives. MARINE POLLUTION BULLETIN 2022; 178:113552. [PMID: 35339865 DOI: 10.1016/j.marpolbul.2022.113552] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Revised: 03/03/2022] [Accepted: 03/05/2022] [Indexed: 06/14/2023]
Abstract
Ocean acidification has emerged as a major concern in the last fifteen years and studies on the impacts of seawater acidification on marine organisms have multiplied accordingly. This review aimed at synthesizing the literature on the effects of seawater acidification on tropical scleractinians under laboratory-controlled conditions. We identified 141 articles (published between 1999 and 2021) and separated endpoints into 22 biological categories to identify global trends for mitigation and gaps in knowledge and research priorities for future investigators. The relative number of affected endpoints increased with pH intensity (particularly for endpoints associated to calcification and reproduction). When exposed to pH 7.6-7.8 (compared to higher pH), 49% of endpoints were affected. The diversity in experimental designs prevented deciphering the modulating role of coral life stages, genera or duration of exposure. Finally, important bias in research efforts included most experiments on adult corals (68.5%), in 27 out of 150 (18%) coral ecoregions and exclusively from shallow-waters.
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Affiliation(s)
- Mathilde Godefroid
- PSL Research University: EPHE-CNRS-UPVD, USR 3278 CRIOBE, BP 1013, 98729 Papetoai, Mo'orea, French Polynesia; Laboratoire d'Excellence "CORAIL", Mo'orea, French Polynesia.
| | - Sam Dupont
- Department of Biological and Environmental Sciences, University of Gothenburg, Kristineberg Marine Research Station, Kristineberg 566, 45178 Fiskebäckskil, Sweden; Radioecology Laboratory International Atomic Energy Agency (IAEA), Marine Laboratories, 4 Quai Antoine 1er, 98000, Monaco
| | - Marc Metian
- Radioecology Laboratory International Atomic Energy Agency (IAEA), Marine Laboratories, 4 Quai Antoine 1er, 98000, Monaco
| | - Laetitia Hédouin
- PSL Research University: EPHE-CNRS-UPVD, USR 3278 CRIOBE, BP 1013, 98729 Papetoai, Mo'orea, French Polynesia; Laboratoire d'Excellence "CORAIL", Mo'orea, French Polynesia
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Andrade Rodriguez N, Moya A, Jones R, Miller DJ, Cooke IR. The Significance of Genotypic Diversity in Coral Competitive Interaction: A Transcriptomic Perspective. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.659360] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Competitive interactions shape coral assemblages and govern the dynamics of coral ecosystems. Although competition is an ecological concept, the outcomes of competitive interactions are ultimately determined by patterns of gene expression. These patterns are subject to genotypic variation on both sides of any interaction. Such variation is typically treated as “noise”, but it is sometimes possible to identify patterns within it that reveal important hidden factors in an experiment. To incorporate genotypic variation into the investigation of coral competitive interactions, we used RNA-sequencing to study changes in gene expression in a hard coral (Porites cylindrica) resulting from non-contact competition experiment with a soft coral (Lobophytum pauciflorum). Hard coral genotype explained the largest proportion of variation between samples; however, it was also possible to detect gene expression changes in 76 transcripts resulting from interaction with the soft coral. In addition, we found a group of 20 short secreted proteins that were expressed as a coordinated unit in three interacting Porites-Lobophytum pairs. The presence of this secretion response was idiosyncratic in that it could not be predicted based on polyp behaviour, or the genotype of hard or soft coral alone. This study illustrates the significance of individual variation as a determinant of competitive behaviour, and also provides some intriguing glimpses into the molecular mechanisms employed by hard corals competing at a distance.
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Manullang C, Millyaningrum IH, Iguchi A, Miyagi A, Tanaka Y, Nojiri Y, Sakai K. Responses of branching reef corals Acropora digitifera and Montipora digitata to elevated temperature and pCO 2. PeerJ 2021; 8:e10562. [PMID: 33391879 PMCID: PMC7759137 DOI: 10.7717/peerj.10562] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Accepted: 11/22/2020] [Indexed: 11/20/2022] Open
Abstract
Anthropogenic emission of CO2 into the atmosphere has been increasing exponentially, causing ocean acidification (OA) and ocean warming (OW). The “business-as-usual” scenario predicts that the atmospheric concentration of CO2 may exceed 1,000 µatm and seawater temperature may increase by up to 3 °C by the end of the 21st century. Increases in OA and OW may negatively affect the growth and survival of reef corals. In the present study, we separately examined the effects of OW and OA on the corals Acropora digitifera and Montipora digitata, which are dominant coral species occurring along the Ryukyu Archipelago, Japan, at three temperatures (28 °C, 30 °C, and 32 °C) and following four pCO2 treatments (400, 600, 800, and 1,000 µatm) in aquarium experiments. In the OW experiment, the calcification rate (p = 0.02), endosymbiont density, and maximum photosynthetic efficiency (Fv/Fm) (both p < 0.0001) decreased significantly at the highest temperature (32 °C) compared to those at the lower temperatures (28 °C and 30 °C) in both species. In the OA experiment, the calcification rate decreased significantly as pCO2 increased (p < 0.0001), whereas endosymbiont density, chlorophyll content, and Fv/Fm were not affected. The calcification rate of A. digitifera showed greater decreases from 30 °C to 32 °C than that of M. digitata. The calcification of the two species responded differently to OW and OA. These results suggest that A. digitifera is more sensitive to OW than M. digitata, whereas M. digitata is more sensitive to OA. Thus, differences in the sensitivity of the two coral species to OW and OA might be attributed to differences in the endosymbiont species and high calcification rates, respectively.
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Affiliation(s)
- Cristiana Manullang
- Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Okinawa, Japan
| | | | - Akira Iguchi
- Geological Survey of Japan, National Institute of Advanced Industrial Science and Technology, Tsukuba, Ibaraki, Japan
| | - Aika Miyagi
- Department of Bioresources Engineering, National Institute of Technology, Okinawa College, Nago-City, Okinawa, Japan
| | - Yasuaki Tanaka
- Environmental and Life Sciences, Universiti Brunei Darussalam, Brunei Darussalam
| | - Yukihiro Nojiri
- Center for Global Environmental Research, National Institute for Environmental Studies, Tsukuba, Ibaraki, Japan.,Graduate School of Earth and Environmental Sciences, Hirosaki University, Hirosaki, Aomori, Japan
| | - Kazuhiko Sakai
- Sesoko Station, Tropical Biosphere Research Center, University of the Ryukyus, Motobu, Okinawa, Japan
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da Silva Souza L, Pusceddu FH, Cortez FS, de Orte MR, Seabra AA, Cesar A, Ribeiro DA, Del Valls Casillas TA, Pereira CDS. Harmful effects of cocaine byproduct in the reproduction of sea urchin in different ocean acidification scenarios. CHEMOSPHERE 2019; 236:124284. [PMID: 31310985 DOI: 10.1016/j.chemosphere.2019.07.015] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2019] [Revised: 06/18/2019] [Accepted: 07/02/2019] [Indexed: 06/10/2023]
Abstract
This study has as main objective assessing the toxicity of crack-cocaine combined with different scenarios of ocean acidification on fertilization rate and embryo-larval development of Echinometra lucunter sea urchin. Effects on early life stages were assessed at five different concentrations (6,25 mg.L-1; 12,5 mg.L-1; 25 mg.L-1; 50 mg.L-1 and 100 mg.L-1) of crack-cocaine at four different pH values (8.5; 8.0; 7.5; 7.0). The pH values were achieved using two different methodologies: adding hydrochloric acid (HCl) and injecting carbon dioxide (CO2). The fertilization test did not show significant differences (p ≤ 0.05) compared with control sample at pH values 8.5; 8.0 and 7.5. Results of embryo-larval assays showed a half maximal effective concentration (EC50) of crack-cocaine at pH values tested (8.5, 8.0, 7.5) as 58.83, 10.67 and 11.58 mg/L-1 for HCl acidification and 58.83, 23.28 and 12.57 mg/L-1 for CO2 enrichment. At pH 7.0 the effects observed in fertilization rate and embryo development were associated with the acidification. This study is the first ecotoxicological assessment of illicit drug toxicity in aquatic ecosystems at different ocean acidification scenarios.
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Affiliation(s)
- Lorena da Silva Souza
- Department of Physico-Chemistry, Aquatic Systems Research Group, UNESCO/UNITWIN WiCop, Faculty of Marine and Environmental Sciences, University of Cádiz, Cádiz, Spain.
| | - Fabio Hermes Pusceddu
- Department of Ecotoxicology, Santa Cecília University (UNISANTA), Santos, São Paulo, Brazil
| | - Fernando Sanzi Cortez
- Department of Ecotoxicology, Santa Cecília University (UNISANTA), Santos, São Paulo, Brazil
| | - Manoela Romano de Orte
- Department of Marine Sciences, Federal University of São Paulo (UNIFESP), Santos, São Paulo, Brazil
| | | | - Augusto Cesar
- Department of Ecotoxicology, Santa Cecília University (UNISANTA), Santos, São Paulo, Brazil; Department of Marine Sciences, Federal University of São Paulo (UNIFESP), Santos, São Paulo, Brazil
| | - Daniel Araki Ribeiro
- Department of Marine Sciences, Federal University of São Paulo (UNIFESP), Santos, São Paulo, Brazil
| | | | - Camilo Dias Seabra Pereira
- Department of Ecotoxicology, Santa Cecília University (UNISANTA), Santos, São Paulo, Brazil; Department of Marine Sciences, Federal University of São Paulo (UNIFESP), Santos, São Paulo, Brazil
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