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Microwave-assisted synthesis of (3,5-disubstituted isoxazole)-linked benzimidazolone derivatives: DFT calculations and biological activities. MONATSHEFTE FUR CHEMIE 2021. [DOI: 10.1007/s00706-021-02764-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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Ait Elmachkouri Y, Saber A, Irrou E, Amer B, Mague JT, Hökelek T, Labd Taha M, Sebbar NK, Essassi EM. Crystal structure, Hirshfeld surface analysis and inter-action energy calculation of 1-decyl-2,3-di-hydro-1 H-benzimidazol-2-one. Acta Crystallogr E Crystallogr Commun 2021; 77:559-563. [PMID: 34026265 PMCID: PMC8100272 DOI: 10.1107/s2056989021004291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2021] [Accepted: 04/21/2021] [Indexed: 11/12/2022]
Abstract
The title mol-ecule, C17H26N2O, adopts an L-shaped conformation, with the straight n-decyl chain positioned nearly perpendicular to the di-hydro-benzimidazole moiety. The di-hydro-benzimidazole portion is not quite planar as there is a dihedral angle of 1.20 (6)° between the constituent planes. In the crystal, N-H⋯O hydrogen bonds form inversion dimers, which are connected into the three-dimensional structure by C-H⋯O hydrogen bonds and C-H⋯π(ring) inter-actions. Hirshfeld surface analysis indicates that the most important contributions for the crystal packing are from H⋯H (75.9%), H⋯C/C⋯H (12.5%) and H⋯O/O⋯H (7.0%) inter-actions. Based on computational chemistry using the CE-B3LYP/6-31 G(d,p) energy model, C-H⋯O hydrogen bond energies are -74.9 (for N-H⋯O) and -42.7 (for C-H⋯O) kJ mol-1.
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Affiliation(s)
- Younesse Ait Elmachkouri
- Laboratoire de Chimie Appliquée et Environnement, Equipe de Chimie Bioorganique Appliquée, Faculté des Sciences, Université Ibn Zohr, Agadir, Morocco
- Laboratoire de Chimie Organique Hétérocyclique URAC 21, Pôle de Compétence Pharmacochimie, Av. Ibn Battouta, BP 1014, Faculté des Sciences, Université Mohammed V, Rabat, Morocco
| | - Asmaa Saber
- Laboratoire de Chimie Organique Hétérocyclique URAC 21, Pôle de Compétence Pharmacochimie, Av. Ibn Battouta, BP 1014, Faculté des Sciences, Université Mohammed V, Rabat, Morocco
| | - Ezaddine Irrou
- Laboratoire de Chimie Appliquée et Environnement, Equipe de Chimie Bioorganique Appliquée, Faculté des Sciences, Université Ibn Zohr, Agadir, Morocco
- Laboratoire de Chimie Organique Hétérocyclique URAC 21, Pôle de Compétence Pharmacochimie, Av. Ibn Battouta, BP 1014, Faculté des Sciences, Université Mohammed V, Rabat, Morocco
| | - Bushra Amer
- Faculty of Medicine and Health Sciences, Sana’a University, San’a, Yemen
| | - Joel T. Mague
- Department of Chemistry, Tulane University, New Orleans, LA 70118, USA
| | - Tuncer Hökelek
- Department of Physics, Hacettepe University, 06800 Beytepe, Ankara, Turkey
| | - Mohamed Labd Taha
- Laboratoire de Chimie Appliquée et Environnement, Equipe de Chimie Bioorganique Appliquée, Faculté des Sciences, Université Ibn Zohr, Agadir, Morocco
| | - Nada Kheira Sebbar
- Laboratoire de Chimie Appliquée et Environnement, Equipe de Chimie Bioorganique Appliquée, Faculté des Sciences, Université Ibn Zohr, Agadir, Morocco
- Laboratoire de Chimie Organique Hétérocyclique URAC 21, Pôle de Compétence Pharmacochimie, Av. Ibn Battouta, BP 1014, Faculté des Sciences, Université Mohammed V, Rabat, Morocco
| | - El Mokhtar Essassi
- Laboratoire de Chimie Organique Hétérocyclique URAC 21, Pôle de Compétence Pharmacochimie, Av. Ibn Battouta, BP 1014, Faculté des Sciences, Université Mohammed V, Rabat, Morocco
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Chkirate K, Azgaou K, Elmsellem H, El Ibrahimi B, Sebbar NK, Anouar EH, Benmessaoud M, El Hajjaji S, Essassi EM. Corrosion inhibition potential of 2-[(5-methylpyrazol-3-yl)methyl]benzimidazole against carbon steel corrosion in 1 M HCl solution: Combining experimental and theoretical studies. J Mol Liq 2021. [DOI: 10.1016/j.molliq.2020.114750] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023]
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Li J, Yang P, Xie X, Jiang S, Tao L, Li Z, Lu C, Liu W. Catalyst‐Free Electrosynthesis of Benzimidazolones through Intramolecular Oxidative C−N Coupling. Adv Synth Catal 2020. [DOI: 10.1002/adsc.202000198] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Jiang‐Sheng Li
- Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation, School of Chemistry and Food EngineeringChangsha University of Science & Technology Changsha 410114 People's Republic of China
| | - Pan‐Pan Yang
- Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation, School of Chemistry and Food EngineeringChangsha University of Science & Technology Changsha 410114 People's Republic of China
| | - Xin‐Yun Xie
- Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation, School of Chemistry and Food EngineeringChangsha University of Science & Technology Changsha 410114 People's Republic of China
| | - Si Jiang
- Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation, School of Chemistry and Food EngineeringChangsha University of Science & Technology Changsha 410114 People's Republic of China
| | - Li Tao
- State Grid Hunan Electric Power Company Limited Research Institute Changsha 410004 People's Republic of China
| | - Zhi‐Wei Li
- Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation, School of Chemistry and Food EngineeringChangsha University of Science & Technology Changsha 410114 People's Republic of China
| | - Cui‐Hong Lu
- Hunan Provincial Key Laboratory of Materials Protection for Electric Power and Transportation, School of Chemistry and Food EngineeringChangsha University of Science & Technology Changsha 410114 People's Republic of China
| | - Wei‐Dong Liu
- National Engineering Research Center for AgrochemicalsHunan Research Institute of Chemical Industry Changsha 410007 People's Republic of China
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Burganov TI, Monari A, Katsyuba SA, Mamedov VA, Zhukova NA, Assfeld X. 2,3-(Dibenzimidazol-2-yl)quinoxalines: Unexpected Dynamical Effect on Steady-State Electronic Absorption Spectra. J Phys Chem B 2019; 123:5514-5523. [PMID: 31192599 DOI: 10.1021/acs.jpcb.9b00974] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
We report on the electronic absorption spectra, conformational behavior, and intra- and intermolecular hydrogen bonds of 2,3-(dibenzimidazol-2-yl)-quinoxaline (DBIQ). The experimentally found strong solvent dependence of the absorption spectra of DBIQ solutions cannot be assigned to electronic excitations of the equilibrium ground-state DBIQ structure. Extended consideration including the nonequilibrium structures within the framework of ab initio molecular dynamics (MD) revealed the importance of torsion molecular motions not covered by the static case. The strong impact of solute-solvent hydrogen bonding on stabilization of these nonequilibrium structures and on conformational composition of DBIQ was demonstrated. A presence of twisted nonplanar geometries along the whole MD trajectory was shown to drastically influence not only energies but also characters of electronic excitations, resulting in a change of local π-π* character in a solution of 1,2-dichloroethane to charge-transfer character in polar dimethylsulfoxide.
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Affiliation(s)
- Timur I Burganov
- FRC Kazan Scientific Center of RAS , Arbuzov Institute of Organic and Physical Chemistry , Arbuzov st. 8 , 420088 Kazan , Russia
| | - Antonio Monari
- Université de Lorraine and CNRS, LPCT UMR 7019 , F-54000 Nancy , France
| | - Sergey A Katsyuba
- FRC Kazan Scientific Center of RAS , Arbuzov Institute of Organic and Physical Chemistry , Arbuzov st. 8 , 420088 Kazan , Russia
| | - Vakhid A Mamedov
- FRC Kazan Scientific Center of RAS , Arbuzov Institute of Organic and Physical Chemistry , Arbuzov st. 8 , 420088 Kazan , Russia
| | - Nataliya A Zhukova
- FRC Kazan Scientific Center of RAS , Arbuzov Institute of Organic and Physical Chemistry , Arbuzov st. 8 , 420088 Kazan , Russia
| | - Xavier Assfeld
- Université de Lorraine and CNRS, LPCT UMR 7019 , F-54000 Nancy , France
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Mostarda S, Gür Maz T, Piccinno A, Cerra B, Banoglu E. Optimisation by Design of Experiment of Benzimidazol-2-One Synthesis under Flow Conditions. Molecules 2019; 24:molecules24132447. [PMID: 31277341 PMCID: PMC6651037 DOI: 10.3390/molecules24132447] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2019] [Revised: 06/27/2019] [Accepted: 06/28/2019] [Indexed: 01/19/2023] Open
Abstract
A novel flow-based approach for the preparation of benzimidazol-2-one (1) scaffold by the 1,1′-carbonyldiimidazole (CDI)-promoted cyclocarbonylation of o-phenylenediamine (2) is reported. Starting from a preliminary batch screening, the model reaction was successfully translated under flow conditions and optimised by means of design of experiment (DoE). The method allowed the efficient preparation of this privileged scaffold and to set up a general protocol for the multigram-scale preparation in high yield, purity, and productivity, and was successfully applied for the multigram flow synthesis of N-(2-chlorobenzyl)-5-cyano-benzimidazol-2-one, which is a key synthon for hit-to-lead explorations in our anti-inflammatory drug discovery program.
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Affiliation(s)
- Serena Mostarda
- Department of Pharmaceutical Sciences, University of Perugia, Via del Liceo 1, 06123 Perugia, Italy
- Current affiliation: Novartis Pharma AG, CH-4002 Basel, Switzerland
| | - Tugçe Gür Maz
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Gazi University, Etiler, 06560 Ankara, Turkey
| | - Alessandro Piccinno
- Department of Pharmaceutical Sciences, University of Perugia, Via del Liceo 1, 06123 Perugia, Italy
| | - Bruno Cerra
- Department of Pharmaceutical Sciences, University of Perugia, Via del Liceo 1, 06123 Perugia, Italy.
| | - Erden Banoglu
- Department of Pharmaceutical Chemistry, Faculty of Pharmacy, Gazi University, Etiler, 06560 Ankara, Turkey.
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Pashirova TN, Zhukova NA, Lukashenko SS, Valeeva FG, Burilova EA, Sapunova AS, Voloshina AD, Mirgorodskaya AB, Zakharova LY, Sinyashin OG, Mamedov VA. Multi-targeted approach by 2-benzimidazolylquinoxalines-loaded cationic arginine liposomes against сervical cancer cells in vitro. Colloids Surf B Biointerfaces 2019; 178:317-328. [PMID: 30884347 DOI: 10.1016/j.colsurfb.2019.03.021] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2018] [Revised: 02/28/2019] [Accepted: 03/10/2019] [Indexed: 01/04/2023]
Abstract
Multi-targeted approaches for inhibition of сervical cancer cells in vitro were developed by implementing two different strategies and drug combination for creation of new therapeutic target agents and for nanotechnological-enhancement of intracellular delivery. New 2-benzimidazolylquinoxalines derivatives were synthesized and characterized by combining two different pharmacophores - benzimidazole and quinoxaline rings directly bonded in their structures. Spectrophotometric technique for determination of content of compounds in various media was developed to evaluate their solubility in water and micellar solutions of surfactants. The bioavailability of poorly water-soluble 2-benzimidazolylquinoxalines was improved by PEGylated liposomes as antitumor drug delivery carriers. 2-benzimidazolylquinoxalines-loaded PEGylated liposomes, with size close to 100 nm and negative zeta potential ranging from -13 mV to -27 mV, were time-stable at room temperature. The design of liposomal formulations for improving cellular uptake and in vitro antitumor efficacy was performed by modification of liposome surface with the new arginine surfactant. The cell viability of 2-benzimidazolylquinoxalines-loaded arginine liposomes on human cancer M-Hela cells was 16% at the concentration 0.15 mg/ml. Moreover, these liposomes showed a lower toxicity (40%) against normal human Gang liver cells both at the lowest and highest tested concentrations.
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Affiliation(s)
- Tatiana N Pashirova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation.
| | - Nataliya A Zhukova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Svetlana S Lukashenko
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Farida G Valeeva
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Evgenia A Burilova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Anastasia S Sapunova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Alexandra D Voloshina
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Alla B Mirgorodskaya
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Lucia Y Zakharova
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation; Kazan National Research Technological University, Karl Marx St., 68, Kazan, 420015, Russian Federation.
| | - Oleg G Sinyashin
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
| | - Vakhid A Mamedov
- Arbuzov Institute of Organic and Physical Chemistry, FRC Kazan Scientific Center of Russian Academy of Sciences, Arbuzov St., 8, Kazan, 420088, Russian Federation
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