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Lorenzi A, Legeai F, Jouan V, Girard PA, Strand MR, Ravallec M, Eychenne M, Bretaudeau A, Robin S, Rochefort J, Villegas M, Burke GR, Rebollo R, Nègre N, Volkoff AN. Identification of a viral gene essential for the genome replication of a domesticated endogenous virus in ichneumonid parasitoid wasps. PLoS Pathog 2024; 20:e1011980. [PMID: 38662774 DOI: 10.1371/journal.ppat.1011980] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2024] [Revised: 05/07/2024] [Accepted: 03/22/2024] [Indexed: 05/08/2024] Open
Abstract
Thousands of endoparasitoid wasp species in the families Braconidae and Ichneumonidae harbor "domesticated endogenous viruses" (DEVs) in their genomes. This study focuses on ichneumonid DEVs, named ichnoviruses (IVs). Large quantities of DNA-containing IV virions are produced in ovary calyx cells during the pupal and adult stages of female wasps. Females parasitize host insects by injecting eggs and virions into the body cavity. After injection, virions rapidly infect host cells which is followed by expression of IV genes that promote the successful development of wasp offspring. IV genomes consist of two components: proviral segment loci that serve as templates for circular dsDNAs that are packaged into capsids, and genes from an ancestral virus that produce virions. In this study, we generated a chromosome-scale genome assembly for Hyposoter didymator that harbors H. didymator ichnovirus (HdIV). We identified a total of 67 HdIV loci that are amplified in calyx cells during the wasp pupal stage. We then focused on an HdIV gene, U16, which is transcribed in calyx cells during the initial stages of replication. Sequence analysis indicated that U16 contains a conserved domain in primases from select other viruses. Knockdown of U16 by RNA interference inhibited virion morphogenesis in calyx cells. Genome-wide analysis indicated U16 knockdown also inhibited amplification of HdIV loci in calyx cells. Altogether, our results identified several previously unknown HdIV loci, demonstrated that all HdIV loci are amplified in calyx cells during the pupal stage, and showed that U16 is required for amplification and virion morphogenesis.
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Affiliation(s)
- Ange Lorenzi
- DGIMI, Univ Montpellier, INRAE, Montpellier, France
- Department of Entomology, University of Georgia, Athens, Georgia, United States of America
| | - Fabrice Legeai
- INRAE, UMR Institut de Génétique, Environnement et Protection des Plantes (IGEPP), BioInformatics Platform for Agroecosystems Arthropods (BIPAA), Campus Beaulieu, Rennes, France
- INRIA, IRISA, GenOuest Core Facility, Campus de Beaulieu, Rennes, France
| | | | | | - Michael R Strand
- Department of Entomology, University of Georgia, Athens, Georgia, United States of America
| | | | | | - Anthony Bretaudeau
- INRAE, UMR Institut de Génétique, Environnement et Protection des Plantes (IGEPP), BioInformatics Platform for Agroecosystems Arthropods (BIPAA), Campus Beaulieu, Rennes, France
- INRIA, IRISA, GenOuest Core Facility, Campus de Beaulieu, Rennes, France
| | - Stéphanie Robin
- INRAE, UMR Institut de Génétique, Environnement et Protection des Plantes (IGEPP), BioInformatics Platform for Agroecosystems Arthropods (BIPAA), Campus Beaulieu, Rennes, France
- INRIA, IRISA, GenOuest Core Facility, Campus de Beaulieu, Rennes, France
| | | | | | - Gaelen R Burke
- Department of Entomology, University of Georgia, Athens, Georgia, United States of America
| | - Rita Rebollo
- INRAE, INSA Lyon, BF2I, UMR203, Villeurbanne, France
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Carpenter M, Benavides Obon A, Kopanke J, Lee J, Reed K, Sherman T, Rodgers C, Stenglein M, McDermott E, Mayo C. In Situ Hybridization (RNAscope) Detection of Bluetongue Virus Serotypes 10 and 17 in Experimentally Co-Infected Culicoides sonorensis. Pathogens 2023; 12:1207. [PMID: 37887723 PMCID: PMC10609982 DOI: 10.3390/pathogens12101207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2023] [Revised: 09/21/2023] [Accepted: 09/27/2023] [Indexed: 10/28/2023] Open
Abstract
Bluetongue virus (BTV) is a segmented, double-stranded RNA virus transmitted by Culicoides biting midges. Infection of domestic and wild ruminants with BTV can result in a devastating disease and significant economic losses. As a virus with a segmented genome, reassortment among the BTV serotypes that have co-infected a host may increase genetic diversity, which can alter BTV transmission dynamics and generate epizootic events. The objective of this study was to determine the extent of dissemination and characterize the tropism of BTV serotypes 10 and 17 in co-infected Culicoides sonorensis. Midges were exposed to both BTV serotypes via blood meal and processed for histologic slides 10 days after infection. An in situ hybridization approach was employed using the RNAscope platform to detect the nucleic acid segment 2 of both serotypes. Observations of the mosaic patterns in which serotypes did not often overlap suggest that co-infection at the cellular level may not be abundant with these two serotypes in C. sonorensis. This could be a consequence of superinfection exclusion. Understanding BTV co-infection and its biological consequences will add an important dimension to the modeling of viral evolution and emergence.
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Affiliation(s)
- Molly Carpenter
- Department of Microbiology, Immunology, and Pathology, Colorado State University, 1601 Campus Delivery, Fort Collins, CO 80526, USA; (M.C.); (K.R.); (C.R.); (M.S.)
| | - AnaMario Benavides Obon
- Diagnostic Medicine Center, Colorado State University, 2450 Gillette Drive, Fort Collins, CO 80526, USA; (A.B.O.); (T.S.)
| | - Jennifer Kopanke
- Department of Comparative Medicine, Oregon Health & Science University, Portland, OR 97239, USA;
| | - Justin Lee
- Genomic Sequencing Laboratory, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA;
| | - Kirsten Reed
- Department of Microbiology, Immunology, and Pathology, Colorado State University, 1601 Campus Delivery, Fort Collins, CO 80526, USA; (M.C.); (K.R.); (C.R.); (M.S.)
| | - Tyler Sherman
- Diagnostic Medicine Center, Colorado State University, 2450 Gillette Drive, Fort Collins, CO 80526, USA; (A.B.O.); (T.S.)
| | - Case Rodgers
- Department of Microbiology, Immunology, and Pathology, Colorado State University, 1601 Campus Delivery, Fort Collins, CO 80526, USA; (M.C.); (K.R.); (C.R.); (M.S.)
| | - Mark Stenglein
- Department of Microbiology, Immunology, and Pathology, Colorado State University, 1601 Campus Delivery, Fort Collins, CO 80526, USA; (M.C.); (K.R.); (C.R.); (M.S.)
| | - Emily McDermott
- Department of Entomology and Plant Pathology, University of Arkansas, Fayetteville, AR 72701, USA;
| | - Christie Mayo
- Department of Microbiology, Immunology, and Pathology, Colorado State University, 1601 Campus Delivery, Fort Collins, CO 80526, USA; (M.C.); (K.R.); (C.R.); (M.S.)
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He L, Shi Y, Ding W, Huang H, He H, Xue J, Gao Q, Zhang Z, Li Y, Qiu L. Cytochrome P450s genes CYP321A9 and CYP9A58 contribute to host plant adaptation in the fall armyworm Spodoptera frugiperda. PEST MANAGEMENT SCIENCE 2023; 79:1783-1790. [PMID: 36627818 DOI: 10.1002/ps.7355] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Revised: 12/25/2022] [Accepted: 01/11/2023] [Indexed: 06/17/2023]
Abstract
BACKGROUND The fall armyworm, Spodoptera frugiperda is one of the most destructive agricultural pests, which can complete their entire life cycle on various plants. At present, some detoxification genes have been proved to be involved in the adaptability to plants in insects. However, the genetics behind insect pest responses to host switches, and their ability to adapt to new host plants, remain poorly understood. This study was conducted to evaluate the adaptation of S. frugiperda to host plant and determine the roles of CYP321A9 and CYP9A58 in the detoxification metabolism of the fall armyworm. RESULTS The results revealed that feeding on maize was more suitable for S. frugiperda to develop compared with rice. In addition, knocking down of SfCYP321A9 and SfCYP9A58 resulted in a prolonged developmental time of S. frugiperda larvae that fed on rice. Meanwhile, RNAi knockdown of SfCYP321A9 resulted in significantly higher mortality of S. frugiperda larvae when exposed to the rice allelochemicals, ferulic acid, gramine and tricin. Furthermore, overexpression of SfCYP321A9 significantly reduced mortality in Drosophila melanogaster when exposed to gramine and tricin. CONCLUSION Our results suggest that CYP321A9 and CYP9A58 genes play a key role in host plant adaptation in S. frugiperda, which contribute to a greater understanding of the molecular basis of host plant adaptation and provide the means to develop effective management tools for S. frugiperda resistance. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Li He
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Yang Shi
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Wenbing Ding
- National Research Center of Engineering & Technology for Utilization of Botanical Functional Ingredients, Hunan Agricultural University, Changsha, China
- Hunan Provincial Engineering & Technology Research Center for Biopesticide and Formulation Processing, Changsha, China
| | - Hong Huang
- Hunan Institute of Plant Protection, Changsha, China
| | - Hualiang He
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Jin Xue
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Qiao Gao
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China
| | - Zhixiang Zhang
- College of Plant Protection, South China Agricultural University, Guangzhou, China
| | - Youzhi Li
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China
- National Research Center of Engineering & Technology for Utilization of Botanical Functional Ingredients, Hunan Agricultural University, Changsha, China
| | - Lin Qiu
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha, China
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Robin S, Legeai F, Jouan V, Ogliastro M, Darboux I. Genome-wide identification of lncRNAs associated with viral infection in Spodoptera frugiperda. J Gen Virol 2023; 104. [PMID: 36757871 DOI: 10.1099/jgv.0.001827] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/10/2023] Open
Abstract
The role of lncRNAs in immune defence has been demonstrated in many multicellular and unicellular organisms. However, investigation of the identification and characterization of long non-coding RNAs (lncRNAs) involved in the insect immune response is still limited. In this study, we used RNA sequencing (RNA-seq) to investigate the expression profiles of lncRNAs and mRNAs in the fall armyworm Spodoptera frugiperda in response to virus infection. To assess the tissue- and virus-specificity of lncRNAs, we analysed and compared their expression profiles in haemocytes and fat body of larvae infected with two entomopathogenic viruses with different lifestyles, i.e. the polydnavirus HdIV (Hyposoter didymator IchnoVirus) and the densovirus JcDV (Junonia coenia densovirus). We identified 1883 candidate lncRNAs, of which 529 showed differential expression following viral infection. Expression profiles differed considerably between samples, indicating that many differentially expressed (DE) lncRNAs showed virus- and tissue-specific expression patterns. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment and target prediction analyses indicated that DE-LncRNAs were mainly enriched in metabolic process, DNA replication and repair, immune response, metabolism of insect hormone and cell adhesion. In addition, we identified three DE-lncRNAs potentially acting as microRNA host genes, suggesting that they participate in gene regulation by producing miRNAs in response to virus infection. This study provides a catalogue of lncRNAs expressed in two important immune tissues and potential insight into their roles in the antiviral defence in S. frugiperda. The results may help future in-depth functional studies to better understand the biological function of lncRNAs in interaction between viruses and the fall armyworm.
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Affiliation(s)
- Stéphanie Robin
- BIPAA, IGEPP, INRAE, Institut Agro, University of Rennes, Rennes, France.,University of Rennes, INRIA, CNRS, IRISA, Rennes, France
| | - Fabrice Legeai
- BIPAA, IGEPP, INRAE, Institut Agro, University of Rennes, Rennes, France.,University of Rennes, INRIA, CNRS, IRISA, Rennes, France
| | - Véronique Jouan
- INRAE, University of Montpellier, UMR Diversité, Génomes & Interactions Microorganismes-Insectes (DGIMI), Montpellier, France
| | - Mylène Ogliastro
- INRAE, University of Montpellier, UMR Diversité, Génomes & Interactions Microorganismes-Insectes (DGIMI), Montpellier, France
| | - Isabelle Darboux
- INRAE, University of Montpellier, UMR Diversité, Génomes & Interactions Microorganismes-Insectes (DGIMI), Montpellier, France
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Yin X, Yang GF, Niu DB, Chen J, Liao M, Cao HQ, Sheng CW. Identification and pharmacological characterization of histamine-gated chloride channels in the fall armyworm, Spodoptera frugiperda. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2022; 140:103698. [PMID: 34848284 DOI: 10.1016/j.ibmb.2021.103698] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/12/2021] [Revised: 11/15/2021] [Accepted: 11/17/2021] [Indexed: 06/13/2023]
Abstract
Histamine-gated chloride channels (HACls) mediate fast inhibitory neurotransmission in invertebrate nervous systems and have important roles in light reception, color processing, temperature preference and light-dark cycle. The fall armyworm, Spodoptera frugiperda is a main destructive pest of grain and row crops. However, the pharmacological characterization of HACls in S. frugiperda remain unknown. In this study, we identified two cDNAs encoding SfHACl1 and SfHACl2 in S. frugiperda. They had similar expression patterns and were most abundantly expressed in the head of larvae and at the egg stage. Electrophysiological analysis with the two-electrode voltage clamp method showed that histamine (HA) and γ-aminobutyric acid (GABA) activated inward currents when SfHACls were singly or collectively expressed with different ratios in Xenopus laevis oocytes. These channels were ≥2000-fold more sensitive to HA than to GABA. They were anion-selective channels, which were highly dependent on changes in external chloride concentrations, but insensitive to changes in external sodium concentrations. The insecticides abamectin (ABM) and emamectin benzoate (EB) also activated these channels with the EC50 to SfHACl1 lower than that to SfHACl2. And the EC50s of ABM and EB to the co-expressed channels gradually increased with increase in the injection ratio of SfHACl2 cRNA. Homology models and docking simulations revealed that HA bound to the large amino-terminal extracellular domain of SfHACl1 and SfHACl2 by forming 4 and 2 hydrogen bonds, respectively. The docking simulations of ABM and EB had similar binding sites in the transmembrane regions. Overall, these findings indicated that HACls act as targets for macrolide, and this study provides theoretical guidance for further derivatization of abamectin insecticides.
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Affiliation(s)
- Xue Yin
- Anhui Province Key Laboratory of Integrated Pest Management on Crops, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China
| | - Guo-Feng Yang
- Anhui Province Key Laboratory of Integrated Pest Management on Crops, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China
| | - Duo-Bang Niu
- Anhui Province Key Laboratory of Integrated Pest Management on Crops, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China
| | - Jiao Chen
- Affiliated Hospital of Integrated Traditional Chinese and Western Medicine, Nanjing University of Chinese Medicine, Nanjing, 210028, PR China
| | - Min Liao
- Anhui Province Engineering Laboratory for Green Pesticide Development and Application, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China
| | - Hai-Qun Cao
- Anhui Province Key Laboratory of Integrated Pest Management on Crops, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China; Anhui Province Engineering Laboratory for Green Pesticide Development and Application, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China.
| | - Cheng-Wang Sheng
- Anhui Province Key Laboratory of Integrated Pest Management on Crops, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China; Anhui Province Engineering Laboratory for Green Pesticide Development and Application, School of Plant Protection, Anhui Agricultural University, Hefei, 230036, PR China.
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Han W, Tang F, Zhong Y, Zhang J, Liu Z. Identification of yellow gene family and functional analysis of Spodoptera frugiperda yellow-y by CRISPR/Cas9. PESTICIDE BIOCHEMISTRY AND PHYSIOLOGY 2021; 178:104937. [PMID: 34446204 DOI: 10.1016/j.pestbp.2021.104937] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Revised: 06/06/2021] [Accepted: 07/14/2021] [Indexed: 06/13/2023]
Abstract
For a devastating agricultural pest, functional genomics promotes the finding of novel technology to control Spodoptera frugiperda, such as the genetics-based strategies. In the present study, 11 yellow genes were identified in Spodoptera frugiperda. The transcriptome analysis showed the tissue-specific expression of part yellow genes, which suggested the importance of yellow genes in some biological processes in S. frugiperda, such as pigmentation. Among these yellow genes, the expression profiles of yellow-y gene showed that it was expressed in all life stages. In order to realize the further study of yellow-y, we employed CRISPR/Cas9 system to knock out this gene. Following knock out, diverse phenotypes were observed, such as color changes in both larvae and adults. Different from the wild-type larvae and adults, G0 mutants were yellowed since hatching. However, no color difference was observed with the pupal cuticle between the wild-type and mutant pupae before the 8th day. On the basis of the single-pair strategy of G0 generation, the yellow-y gene was proved to be a recessive gene. The G1 yellowish larvae with biallelic mutations displayed a relatively longer development period than wild-type, and often generated abnormal pupae and moths. The deletion of yellow-y also resulted in a decline in the fecundity. The results revealed that yellow-y gene was important for S. frugiperda pigmentation, as well as in its development and reproduction. Besides, the present study set up a standard procedure to knock out genes in S. frugiperda, which could be helpful for our understanding some key molecular processes, such as functional roles of detoxification genes as insecticide resistance mechanisms or modes of action of insecticides to facilitate the management of this insect pest.
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Affiliation(s)
- Weikang Han
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), College of Plant Protection, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
| | - Fengxian Tang
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), College of Plant Protection, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
| | - Yanni Zhong
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), College of Plant Protection, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
| | - Junteng Zhang
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), College of Plant Protection, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China
| | - Zewen Liu
- Key Laboratory of Integrated Management of Crop Diseases and Pests (Ministry of Education), College of Plant Protection, Nanjing Agricultural University, Weigang 1, Nanjing 210095, China.
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Paredes-Sánchez FA, Rivera G, Bocanegra-García V, Martínez-Padrón HY, Berrones-Morales M, Niño-García N, Herrera-Mayorga V. Advances in Control Strategies against Spodoptera frugiperda. A Review. Molecules 2021; 26:molecules26185587. [PMID: 34577058 PMCID: PMC8471127 DOI: 10.3390/molecules26185587] [Citation(s) in RCA: 31] [Impact Index Per Article: 10.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 09/06/2021] [Accepted: 09/09/2021] [Indexed: 11/24/2022] Open
Abstract
The strategies for controlling the insect pest Spodoptera frugiperda have been developing over the past four decades; however, the insecticide resistance and the remarkable adaptability of this insect have hindered its success. This review first analyzes the different chemical compounds currently available and the most promising options to control S. frugiperda. Then, we analyze the metabolites obtained from plant extracts with antifeedant, repellent, insecticide, or ovicide effects that could be environmentally friendly options for developing botanical S. frugiperda insecticides. Subsequently, we analyze the biological control based on the use of bacteria, viruses, fungi, and parasitoids against this pest. Finally, the use of sex pheromones to monitor this pest is analyzed. The advances reviewed could provide a wide panorama to guide the search for new pesticidal strategies but focused on environmental sustainability against S. frugiperda.
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Affiliation(s)
- Francisco A. Paredes-Sánchez
- Unidad Académica Multidisciplinaria Mante, Universidad Autónoma de Tamaulipas, El Mante 89840, Tamaulipas, Mexico; (F.A.P.-S.); (M.B.-M.); (N.N.-G.)
| | - Gildardo Rivera
- Centro de Biotecnología Genómica, Instituto Politécnico Nacional, Reynosa 88710, Tamaulipas, Mexico; (G.R.); (V.B.-G.)
| | - Virgilio Bocanegra-García
- Centro de Biotecnología Genómica, Instituto Politécnico Nacional, Reynosa 88710, Tamaulipas, Mexico; (G.R.); (V.B.-G.)
| | - Hadassa Y. Martínez-Padrón
- Subdirección de Enseñanza e Investigación, Hospital Regional de Alta Especialidad de Ciudad Victoria “Bicentenario 2010”, Cd. Victoria 87087, Tamaulipas, Mexico;
| | - Martín Berrones-Morales
- Unidad Académica Multidisciplinaria Mante, Universidad Autónoma de Tamaulipas, El Mante 89840, Tamaulipas, Mexico; (F.A.P.-S.); (M.B.-M.); (N.N.-G.)
| | - Nohemí Niño-García
- Unidad Académica Multidisciplinaria Mante, Universidad Autónoma de Tamaulipas, El Mante 89840, Tamaulipas, Mexico; (F.A.P.-S.); (M.B.-M.); (N.N.-G.)
| | - Verónica Herrera-Mayorga
- Unidad Académica Multidisciplinaria Mante, Universidad Autónoma de Tamaulipas, El Mante 89840, Tamaulipas, Mexico; (F.A.P.-S.); (M.B.-M.); (N.N.-G.)
- Correspondence: ; Tel.: +52-(492)-909-3646
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Qiu L, He L, Tan X, Zhang Z, Wang Y, Li X, He H, Ding W, Li Y. Identification and phylogenetics of Spodoptera frugiperda chemosensory proteins based on antennal transcriptome data. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 2020; 34:100680. [PMID: 32278289 DOI: 10.1016/j.cbd.2020.100680] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/09/2019] [Revised: 02/28/2020] [Accepted: 03/01/2020] [Indexed: 12/12/2022]
Abstract
Understanding the interaction between the insect olfactory system and the environment is crucial for fully explaining the molecular mechanisms underlying insect behavior, and providing new strategies for integrated pest management. Although there is good evidence that olfactory proteins play a vital role in mediating insect behaviors, the olfactory mechanism of insects remains poorly understood. We identified a total of 71 chemosensory genes; 25 odorant-binding proteins (OBPs), 27 odorant receptors (ORs), 8 ionotropic receptors (IRs), 8 chemosensory proteins (CSPs) and 3 sensory neuron membrane proteins (SNMPs), in the antennae of male and female fall armyworms, Spodoptera frugiperda, an invasive global pest that causes significant economic damage worldwide. We used differential gene expression (DGE) and fragments per kilobase per million fragments (FPKM) values to compare the transcript levels of candidate chemosensory genes, and qRT-PCR to compare the expression levels of the OR gene, in male and female antennae. The expression of candidate OR genes in male and female antennae was consistent with the DGE data, and the expression of the SfruCL4419.Contig1-All and SfruUnigene1070-All genes was sex-biased. These results not only provide new information on the olfactory mechanism of S. frugiperda, and insects in general, but also suggest new gene targets for pest control.
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Affiliation(s)
- Lin Qiu
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha 410128, China
| | - Li He
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha 410128, China
| | - Xiaoping Tan
- Plant Protection and Inspection Station, Agriculture and Rural Department of Hunan Province, Changsha 410005, China
| | - Zhengbing Zhang
- Plant Protection and Inspection Station, Agriculture and Rural Department of Hunan Province, Changsha 410005, China
| | - Yong Wang
- Plant Protection and Inspection Station, Agriculture and Rural Department of Hunan Province, Changsha 410005, China
| | - Xinwen Li
- Plant Protection and Inspection Station, Agriculture and Rural Department of Hunan Province, Changsha 410005, China
| | - Hualiang He
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha 410128, China
| | - Wenbing Ding
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha 410128, China; Hunan Provincial Engineering & Technology Research Center for Biopesticide and Formulation Processing, Changsha 410128, China
| | - Youzhi Li
- Hunan Provincial Key Laboratory for Biology and Control of Plant Diseases and Insect Pests, College of Plant Protection, Hunan Agricultural University, Changsha 410128, China; Hunan Provincial Engineering & Technology Research Center for Biopesticide and Formulation Processing, Changsha 410128, China.
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9
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Lorenzi A, Ravallec M, Eychenne M, Jouan V, Robin S, Darboux I, Legeai F, Gosselin-Grenet AS, Sicard M, Stoltz D, Volkoff AN. RNA interference identifies domesticated viral genes involved in assembly and trafficking of virus-derived particles in ichneumonid wasps. PLoS Pathog 2019; 15:e1008210. [PMID: 31834912 PMCID: PMC6957214 DOI: 10.1371/journal.ppat.1008210] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2019] [Revised: 01/13/2020] [Accepted: 11/13/2019] [Indexed: 02/07/2023] Open
Abstract
There are many documented examples of viral genes retained in the genomes of multicellular organisms that may in some cases bring new beneficial functions to the receivers. The ability of certain ichneumonid parasitic wasps to produce virus-derived particles, the so-called ichnoviruses (IVs), not only results from the capture and domestication of single viral genes but of almost entire ancestral virus genome(s). Indeed, following integration into wasp chromosomal DNA, the putative and still undetermined IV ancestor(s) evolved into encoding a ‘virulence gene delivery vehicle’ that is now required for successful infestation of wasp hosts. Several putative viral genes, which are clustered in distinct regions of wasp genomes referred to as IVSPERs (Ichnovirus Structural Protein Encoding Regions), have been assumed to be involved in virus-derived particles morphogenesis, but this question has not been previously functionally addressed. In the present study, we have successfully combined RNA interference and transmission electron microscopy to specifically identify IVSPER genes that are responsible for the morphogenesis and trafficking of the virus-derived particles in ovarian cells of the ichneumonid wasp Hyposoter didymator. We suggest that ancestral viral genes retained within the genomes of certain ichneumonid parasitoids possess conserved functions which were domesticated for the purpose of assembling viral vectors for the delivery of virulence genes to parasitized host animals. Thousands of parasitic wasp from the ichneumonid family rely on virus-derived particles, named Ichnoviruses (Polydnavirus family), to ensure their successful development. The particles are produced in a specialized ovarian tissue of the female wasp named calyx. Virions are assembled in the calyx cell nuclei and stored in the oviduct before being transferred to the parasitoid host upon female wasp oviposition. Genes encoding proteins associated with the particles had been previously identified. These genes are localized in clusters of genes in the wasp genome (named IVSPER for “Ichnovirus structural proteins encoding regions”), they are specifically transcribed in the calyx but not encapsidated. IVSPER genes were thus hypothesized to derive from the integration of a virus, however still undetermined. Indeed, none of the identified genes had similarity to known sequence, making in addition unclear their function in particle production. In this work, we use the RNA interference technology to decipher the function of six IVSPER genes from the ichneumonid wasp Hyposoter didymator. Thanks to this approach, combined with transmission electron microscopy, we show that the studied IVSPER genes are required in different steps of particle morphogenesis and trafficking, and that their functions are those expected of a typical virus.
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Affiliation(s)
- Ange Lorenzi
- DGIMI, INRA, University of Montpellier, Montpellier, France
| | - Marc Ravallec
- DGIMI, INRA, University of Montpellier, Montpellier, France
| | | | | | - Stéphanie Robin
- UMR 1349 INRA/Agrocampus Ouest/Université Rennes 1, Institut de Génétique, Environnement et Protection des Plantes (IGEPP), Le Rheu, France
- Université Rennes 1, INRIA, CNRS, IRISA, Rennes, France
| | | | - Fabrice Legeai
- UMR 1349 INRA/Agrocampus Ouest/Université Rennes 1, Institut de Génétique, Environnement et Protection des Plantes (IGEPP), Le Rheu, France
- Université Rennes 1, INRIA, CNRS, IRISA, Rennes, France
| | | | - Mathieu Sicard
- ISEM, University of Montpellier, CNRS, IRD, EPHE, Montpellier, France
| | - Don Stoltz
- Department of Microbiology and Immunology, Dalhousie University, Halifax, Canada
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