1
|
Iqbal Y, Haroon M, Akhtar T, Ashfaq M, Tahir MN, Rasheed L, Yousuf M, Zia MA. Synthesis, Spectroscopic Characterization, Single Crystal XRD, Hirshfeld Surface Analysis and Theoretical Studies (DFT) of 4-Adamantyl-(2-(substitutedbenzylidene)hydrazinyl)thiazoles. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133620] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/31/2022]
|
2
|
Haroon M, Akhtar T, Yousuf M, Tahir MN, Rasheed L, Zahra SS, Haq IU, Ashfaq M. Synthesis, crystal structure, Hirshfeld surface investigation and comparative DFT studies of ethyl 2-[2-(2-nitrobenzylidene)hydrazinyl]thiazole-4-carboxylate. BMC Chem 2022; 16:18. [PMID: 35317817 PMCID: PMC8941777 DOI: 10.1186/s13065-022-00805-1] [Citation(s) in RCA: 18] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 02/28/2022] [Indexed: 01/04/2023] Open
Abstract
The ethyl 2-[2-(2-nitrobenzylidene)hydrazinyl]thiazole-4-carboxylate (1), a thiazole ester, was synthesized by refluxing 1-(2-nitrobenzylidene)thiosemicarbazide and ethyl bromopyruvate. The compound is characterized by spectrometric, spectroscopic and single crystal (SC-XRD) techniques. Non-covalent interactions that are responsible for crystal packing are explored by Hirshfeld surface analysis. All theoretical calculations were performed by DFT quantum chemical methods using 6-311G(d,p) and cc-pVTZ basis sets and compared. Theoretical harmonic frequencies of ethyl 2-[2-(2-nitrobenzylidene)hydrazinyl]thiazole-4-carboxylate (1) were optimized. Confirmation of hydrogen bonding sites was analyzed by molecular electrostatic potential (MEP) and Mulliken population analysis. The vibrational frequencies of characteristic functional groups and chemical shifts were found in good agreement with experimental assignments. Frontier molecular orbital (FMO) revealed relatively small HOMO–LUMO (highest occupied molecular orbital-lowest unoccupied molecular orbital) gape, which speaks off the nearly planar geometry and extended conjugation, as compared to the substituents with no conjugation possible. It has also been observed that –NO2 substituent plays a vital role for this relatively small HOMO–LUMO gape and overall electronic properties when compared with similar thiazole carboxylates (2–6, Table 6). Ethyl 2-[2-(2-nitrobenzylidene)hydrazinyl]thiazole-4-carboxylate (1) was also evaluated for its anti-oxidant and anti-microbial activities.
Collapse
Affiliation(s)
- Muhammad Haroon
- Department of Chemistry, Mirpur University of Science and Technology (MUST), 10250-Mirpur, (AJK), Pakistan.,Department of Chemistry, Government Major Muhammad Afzal Khan (Shaheed), Boys Degree College Afzalpur, Mirpur, (Affiliated with Mirpur University of Science and Technology (MUST), 10250-Mirpur, (AJK), Pakistan
| | - Tashfeen Akhtar
- Department of Chemistry, Mirpur University of Science and Technology (MUST), 10250-Mirpur, (AJK), Pakistan.
| | - Muhammad Yousuf
- Department of Chemistry, Ulsan National Institute of Science and Technology (UNIST), Ulsan, South Korea.
| | | | - Lubna Rasheed
- Department of Chemistry, Division of Science and Technology, University of Education, Township, Lahore, Pakistan
| | - Syeda Saniya Zahra
- Department of Pharmacy, Quaid-I-Azam University, 45320, Islamabad, Pakistan
| | - Ihsan Ul Haq
- Department of Pharmacy, Quaid-I-Azam University, 45320, Islamabad, Pakistan
| | - Muhammad Ashfaq
- Department of Physics, University of Sargodha, Sargodha, Punjab, Pakistan.,Department of Physics, University of Mianwali, Mianwali, Punjab, Pakistan
| |
Collapse
|
3
|
Simsek O, Dincer M, Dege N, Saif E, Yilmaz I, Cukurovali A. Crystal structure and Hirshfeld surface analysis of ( Z)-4-{[4-(3-methyl-3-phenyl-cyclo-but-yl)thia-zol-2-yl]amino}-4-oxobut-2-enoic acid. Acta Crystallogr E Crystallogr Commun 2022; 78:120-124. [PMID: 35145736 PMCID: PMC8819446 DOI: 10.1107/s2056989022000032] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2021] [Accepted: 01/02/2022] [Indexed: 11/22/2022]
Abstract
The title cyclo-butyl compound, C18H18N2O3S, was synthesized by the inter-action of 4-(3-methyl-3-phenyl-cyclo-but-yl)thia-zol-2-amine and maleic anhydride, and crystallizes in the ortho-rhom-bic space group P212121 with Z' = 1. The mol-ecular geometry is partially stabilized by an intra-molecular N-H⋯O hydrogen bond forming an S 1 1(7) ring motif. The mol-ecule is non-planar with a dihedral angle of 88.29 (11)° between the thia-zole and benzene rings. In the crystal, the mol-ecules are linked by O-H⋯N hydrogen bonds, forming supra-molecular ribbons with C 1 1(9) chain motifs. To further analyze the inter-molecular inter-actions, a Hirshfeld surface analysis was performed. The results indicate that the most important contributions to the overall surface are from H⋯H (43%), C⋯H (18%), O⋯H (17%) and N⋯H (6%), inter-actions.
Collapse
Affiliation(s)
- Okan Simsek
- Department of Physics, Faculty of Arts and Sciences, Ondokuz Mayıs University, 55139, Samsun, Turkey
| | - Muharrem Dincer
- Department of Physics, Faculty of Arts and Sciences, Ondokuz Mayıs University, 55139, Samsun, Turkey
| | - Necmi Dege
- Department of Physics, Faculty of Arts and Sciences, Ondokuz Mayıs University, 55139, Samsun, Turkey
| | - Eiad Saif
- Department of Computer and Electronic Engineering Technology, Sanaa Community College, Sanaa, Yemen
- Ondokuz Mayıs University, Faculty of Engineering, Department of Electrical and Electronic Engineering, 55139, Samsun, Turkey
| | - Ibrahim Yilmaz
- Department of Chemistry, Kamil Ozdag Science, Karamanoğlu Mehmetbey University, 70200, Karaman, Turkey
| | - Alaaddin Cukurovali
- Department of Chemistry, Sciences Faculty, Fırat University, 23119, Elazığ, Turkey
| |
Collapse
|
4
|
Synthesis, X-ray structure, FT-IR, NMR (13C/1H), UV–Vis spectroscopy, TG/DTA study and DFT calculations on 2-(benzo[d]thiazol-2-ylthio)-1-((1s, 3s)-3-mesityl-3-methylcyclobutyl) ethan-1-one. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.06.080] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
|
5
|
Spectroscopic and molecular modeling studies of N-(4-(3-methyl-3-phenylcyclobutyl)-3-phenylthiazole-2(3H)-ylidene)aniline by using experimental and density functional methods. JOURNAL OF SAUDI CHEMICAL SOCIETY 2017. [DOI: 10.1016/j.jscs.2015.05.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
|
6
|
Ozdemir M, Sonmez M, Sen F, Dincer M, Ozdemir N. Synthesis of a new heterocyclic Schiff base ligand “(E)-5-benzoyl-4-phenyl-1-((pyridin-2-ylmethylene) amino) pyrimidin-2(1H)-one”: An experimental and computational modeling study. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2016.08.031] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
|
7
|
Sukhonosova EV, Sokov SA, Ostapenko GI, Bunev AS, Dorovatovskii PV, Zubavichus YV, Khrustalev VN. Crystal structures of ethyl {2-[4-(4-iso-propyl-phen-yl)thia-zol-2-yl]phen-yl}carbamate and ethyl {2-[4-(3-nitro-phen-yl)thia-zol-2-yl]phen-yl}carbamate. Acta Crystallogr E Crystallogr Commun 2016; 72:1321-1325. [PMID: 27920926 PMCID: PMC5120716 DOI: 10.1107/s2056989016013104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Accepted: 08/13/2016] [Indexed: 11/23/2022]
Abstract
The title compounds, C21H22N2O2S (I) and C18H15N3O4S (II), are structural analogs of the alkaloid Thio-sporine B. Both mol-ecules adopt a near-planar V-shaped conformation, which is consolidated by intra-molecular N-H⋯N and C-H⋯O hydrogen bonds. The crystal structure of (I) consists of mlecular stacks along the a axis, in which the mol-ecules are linked to each other by π(S)⋯π(C) inter-actions. In the crystal of (II), mol-ecules are linked into chains by C-H⋯O hydrogen bonds and the chains are cross-linked into (100) sheets by π-π stacking inter-actions.
Collapse
Affiliation(s)
- Elena V. Sukhonosova
- Laboratory of Functional Heterocyclic Compounds, Togliatti State University, 14 Belorusskaya St., Togliatti 445020, Russian Federation
| | - Sergey A. Sokov
- Laboratory of Functional Heterocyclic Compounds, Togliatti State University, 14 Belorusskaya St., Togliatti 445020, Russian Federation
| | - Gennady I. Ostapenko
- Laboratory of Functional Heterocyclic Compounds, Togliatti State University, 14 Belorusskaya St., Togliatti 445020, Russian Federation
| | - Alexander S. Bunev
- Laboratory of Functional Heterocyclic Compounds, Togliatti State University, 14 Belorusskaya St., Togliatti 445020, Russian Federation
| | - Pavel V. Dorovatovskii
- National Research Centre "Kurchatov Institute", 1 Acad. Kurchatov Sq., Moscow 123182, Russian Federation
| | - Yan V. Zubavichus
- National Research Centre "Kurchatov Institute", 1 Acad. Kurchatov Sq., Moscow 123182, Russian Federation
| | - Victor N. Khrustalev
- Inorganic Chemistry Department, Peoples’ Friendship University of Russia, 6 Miklukho-Maklay St., Moscow 117198, Russian Federation
- X-Ray Structural Centre, A.N. Nesmeyanov Institute of Organoelement Compounds, Russian Academy of Sciences, 28 Vavilov St., B–334, Moscow 119991, Russian Federation
| |
Collapse
|
8
|
Demir S, Sarioğlu AO, Güler S, Dege N, Sönmez M. Synthesis, crystal structure analysis, spectral IR, NMR UV–Vis investigations, NBO and NLO of 2-benzoyl-N-(4-chlorophenyl)-3-oxo-3-phenylpropanamide with use of X-ray diffractions studies along with DFT calculations. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.04.042] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
9
|
Şen F, Dinçer M, Cukurovali A. Structural and spectroscopic characterization of 4-(3-methyl-3-phenylcyclobutyl)-2-(2-propylidenehydrazinyl)thiazole: A combined experimental and DFT analysis. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 150:257-267. [PMID: 26051647 DOI: 10.1016/j.saa.2015.05.079] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2013] [Revised: 05/15/2015] [Accepted: 05/20/2015] [Indexed: 06/04/2023]
Abstract
We investigated the structural and spectroscopic properties of the title compound by means of experimental and DFT quantum chemical methods. The crystal structure of compound was brought to light by single crystal X-ray diffraction method, and were characterized spectroscopically using FT-IR and NMR spectra. FT-IR spectrum in solid state was observed in the region 4000-400 cm(-1). The (1)H and (13)C NMR spectra were recorded in CDCl3 solution. The molecular geometry were those obtained from the X-ray structure determination was optimized using density functional theory (DFT/B3LYP) method with the 6-31G(d, p) and 6-31+G(d, p) basis sets in ground state. From the optimized geometry of the molecule, geometric parameters (bond lengths, bond angles, torsion angles), vibrational assignments and chemical shifts of the title compound have been calculated theoretically and compared with the experimental data. Although theoretical calculations were carried out in gas phase, no significant differences in these values.
Collapse
Affiliation(s)
- Fatih Şen
- Kilis 7 Aralık University, Vocational High School of Health Services, Department of Opticianry, 79000 Kilis, Turkey.
| | - Muharrem Dinçer
- Ondokuz Mayıs University, Arts and Sciences Faculty, Department of Physics, 55139 Samsun, Turkey
| | - Alaaddin Cukurovali
- Firat University, Sciences Faculty, Department of Chemistry, 23119 Elazig, Turkey
| |
Collapse
|
10
|
Şen F, Ekici Ö, Dinçer M, Cukurovali A. A comparative study on 4-(4-(3-mesityl-3-methylcyclobutyl)thiazole-2-yl)-1-thia-4-azaspiro[4.5]decan-3-one: Experimental and density functional methods. J Mol Struct 2015. [DOI: 10.1016/j.molstruc.2014.12.088] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
|
11
|
Özdemir M, Sönmez M, Şen F, Dinçer M, Özdemir N. A novel one-pot synthesis of heterocyclic compound (4-benzoyl-5-phenyl-2-(pyridin-2-yl)-3,3a-dihydropyrazolo[1,5-c]pyrimidin-7(6H)-one): structural (X-ray and DFT) and spectroscopic (FT-IR, NMR, UV-Vis and Mass) characterization studies. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 137:1304-1314. [PMID: 25305624 DOI: 10.1016/j.saa.2014.08.131] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2014] [Revised: 08/27/2014] [Accepted: 08/31/2014] [Indexed: 06/04/2023]
Abstract
In this study, the title compound named as 4-benzoyl-5-phenyl-2-(pyridin-2-yl)-3,3a-dihydropyrazolo[1,5-c]pyrimidin-7(6H)-one (C24H18N4O2) was both experimentally and theoretically investigated. The compound was synthesized and characterized by FT-IR, NMR ((1)H NMR, (13)C NMR and HETCOR-NMR), Mass spectroscopies and single-crystal X-ray diffraction methods. The compound crystallizes in the monoclinic space group P2(1)/n with a=6.1402 (3) Å, b=21.4470 (15) Å, c=15.0049 (8) Å and β=97.407 (4)°. The molecular geometry was obtained from the X-ray structure determination optimized using density functional theory (DFT/B3LYP) method with the 6-31+G(d, p) basis set in ground state. From the optimized structure, geometric parameters, vibrational wavenumbers and chemical shifts of molecule were obtained. Experimental measurements were compared with its corresponding the calculated data. An excellent harmony between the two data was ascertained. Besides, molecular electrostatic potential (MEP), frontier molecular orbitals (FMOs) and non-linear optical (NLO) properties of the title molecule were investigated by theoretical calculations at the B3LYP/6-31+G(d, p) level.
Collapse
Affiliation(s)
- Mecit Özdemir
- Kilis 7 Aralık University, Arts and Sciences Faculty, Department of Chemistry, 79000 Kilis, Turkey.
| | - Mehmet Sönmez
- Gaziantep University, Arts and Sciences Faculty, Department of Chemistry, 27310 Gaziantep, Turkey
| | - Fatih Şen
- Kilis 7 Aralık University, Vocational High School of Health Services, Department of Opticianry, 79000 Kilis, Turkey
| | - Muharrem Dinçer
- Ondokuz Mayıs University, Arts and Sciences Faculty, Department of Physics, 55139 Samsun, Turkey
| | - Namık Özdemir
- Ondokuz Mayıs University, Arts and Sciences Faculty, Department of Physics, 55139 Samsun, Turkey
| |
Collapse
|
12
|
Şen F, Dinçer M, Cukurovali A. Synthesis, spectroscopic characterization and quantum chemical computational studies on 4-(3-methyl-3-phenylcyclobutyl)-2-(2-undecylidenehydrazinyl)thiazole. J Mol Struct 2014. [DOI: 10.1016/j.molstruc.2014.07.041] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/25/2022]
|