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Structural and vibrational investigation of Cis-Trans isomers of potent insecticide allethrin. J Mol Model 2022; 28:268. [PMID: 35995874 DOI: 10.1007/s00894-022-05272-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2022] [Accepted: 08/12/2022] [Indexed: 01/18/2023]
Abstract
In this research, the optimised structural and vibrational properties of cis-trans isomers of powerful insecticide allethrin were theoretically studied in gas phase and in aqueous and ethanol solutions by using hybrid B3LYP/6-311 + + g(d,p) level of theory. The results revealed that the permittivity of solvent has influence on the properties of both isomers, thus, higher dipole moments and solvation energies are observed in water, a solvent of higher permittivity (78.355) than ethanol. Complete vibrational assignments of both isomers were done by combining the experimental IR spectrum of allethrin with the scaled quantum mechanical force field (SQMFF) methodology and the determination of corresponding scaled force constants in gas phase and aqueous solution are reported. Different signs of dihedral O2C10C6C4 angles of both isomers (negative in cis and positive in trans) support the differences in the vibrational assignments. Natural bond orbital (NBO) calculations suggest that both isomers are highly stable in gas phase and aqueous solution and that the side chains and five member's rings are involved in the n → σ* interactions. However, atoms in molecules (AIM) studies reveal a higher stability of form cis in both media than the trans one. Merz-Kollman (MK), Mulliken and natural population atomic (NPA) charges for both isomers support the higher hydration of trans isomer in aqueous media and, hence, the higher solvation energy in water (ΔGC/ZPVE = - 80.29 kJ/mol). Changes in the bond orders of O and C atoms of side chain are observed in water as a consequence of hydration. The higher stability of the cis form in the above solutions could be explained by the lower solvation energy in water, as supported by AIM calculations. The studies of frontier orbital reveal that the cis form in both media is sligthly more reactive than the trans form.
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Synthesis and characterization of a novel coordination compound based on 2, 6-dimethylpiperazine. J Mol Struct 2022. [DOI: 10.1016/j.molstruc.2022.133569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Castillo MV, Iramain MA, Davies L, Manzur ME, Brandán SA. Structural study and vibrational assignments of FT-IR and FT-Raman spectra of powerful pesticide 2,4’-DDT. Its comparison with 4,4’-DDT. J Mol Struct 2021. [DOI: 10.1016/j.molstruc.2020.129795] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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Ledesma AE, Catalán CAN, Brandán SA. A combined theoretical and experimental study on the structure, vibrational, and electronic properties of antiparkinsonian drug safinamide. SN APPLIED SCIENCES 2020. [DOI: 10.1007/s42452-020-03661-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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Jomaa I, Noureddine O, Gatfaoui S, Issaoui N, Roisnel T, Marouani H. Experimental, computational, and in silico analysis of (C8H14N2)2[CdCl6] compound. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2020.128186] [Citation(s) in RCA: 48] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Spectroscopic studies on the potassium 1-fluorobenzoyltrifluoroborate salt by using the FT-IR, Raman and UV–Visible spectra and DFT calculations. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.127534] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
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7
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Iramain MA, Castillo MV, Davies L, Manzur ME, Brandán SA. Structural and SQMFF study of potent insecticide 4′,4′-DDT combining the FT-IR and FT-Raman spectra with DFT calculations. J Mol Struct 2020. [DOI: 10.1016/j.molstruc.2019.126964] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Calado SLDM, Santos GS, Vicentini M, Bozza DC, Prodocimo V, Magalhães VFD, Cestari MM, Silva de Assis HC. Multiple biomarkers response in a Neotropical fish exposed to paralytic shellfish toxins (PSTs). CHEMOSPHERE 2020; 238:124616. [PMID: 31466003 DOI: 10.1016/j.chemosphere.2019.124616] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2019] [Revised: 08/16/2019] [Accepted: 08/17/2019] [Indexed: 06/10/2023]
Abstract
The Alagados Reservoir (Southern Brazil) is used as water supply, and since 2002 there have been reports with a presence of cyanobacterial blooms and cyanotoxins. In order to assess the water quality and the ecological integrity of the reservoir, we evaluated biochemical, genotoxic and osmoregulatory biomarkers in the freshwater cichlid fish (Geophagus brasiliensis) that were exposed to PSTs. The fish were sampled in the Alagados Reservoir in February 2016 (Summer) and were divided in three groups: 1) Reservoir group (RES): fish were collected immediately after sampling; 2) Depuration group (DEP): fish were submitted to the depuration experiment for 90 days in the laboratory; and 3) Reproduction group (REP): fish were kept in the laboratory until the fertilization and the chemical analyses were performed on the offspring (F1 generation). In the RES and DEP the blood, brain, muscle, liver and gills were collected for biochemical, genotoxic and osmoregulatory biomarkers analysis. Our results showed that the fish from the Alagados Reservoir (RES) presented oxidative stress and DNA damage; and after 90 days (DEP), the antioxidant system and DNA damage were recovered. Although PSTs were considered a risk to the ecological integrity of this water body; PSTs concentrations were not found in the tissues of the F1 generation. In addition, the biomarkers used were useful tools to evaluate the effects of environment contamination. Therefore, it is necessary to develop new technologies and monitoring programs in order to reduce cyanobaterial blooms, cyanotoxins and human activities that cause the contamination in aquatic environments.
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Affiliation(s)
- Sabrina Loise de Morais Calado
- Ecology and Conservation Program Post-Graduation, Federal University of Paraná, Avenue Coronel Francisco Heráclito dos Santos, 100, Jardim das Américas, Curitiba, Paraná, 81531-980, Brazil
| | - Gustavo Souza Santos
- Department of Genetics, Federal University of Paraná, Avenue Coronel Francisco Heráclito dos Santos, 100, Jardim das Américas, Curitiba, Paraná, 81531-980, Brazil
| | - Maiara Vicentini
- Ecology and Conservation Program Post-Graduation, Federal University of Paraná, Avenue Coronel Francisco Heráclito dos Santos, 100, Jardim das Américas, Curitiba, Paraná, 81531-980, Brazil
| | - Deivyson Cattine Bozza
- Department of Physiology, Federal University of Paraná, Avenue Coronel Francisco Heráclito dos Santos, 100, Jardim das Américas, Curitiba, Paraná, 81531-980, Brazil
| | - Viviane Prodocimo
- Department of Physiology, Federal University of Paraná, Avenue Coronel Francisco Heráclito dos Santos, 100, Jardim das Américas, Curitiba, Paraná, 81531-980, Brazil
| | - Valéria Freitas de Magalhães
- Institute of Biophysics Carlos Chagas Filho, Avenue Carlos Chagas Filho, 373 Bloco G, Cidade Universitária, Ilha do Fundão, Rio de Janeiro, Rio de Janeiro, 21941-902, Brazil
| | - Marta Margarete Cestari
- Department of Genetics, Federal University of Paraná, Avenue Coronel Francisco Heráclito dos Santos, 100, Jardim das Américas, Curitiba, Paraná, 81531-980, Brazil
| | - Helena Cristina Silva de Assis
- Department of Pharmacology, Federal University of Paraná, Avenue Coronel Francisco Heráclito dos Santos, 100, Jardim das Américas, Curitiba, Paraná, 81531-980, Brazil.
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Hidalgo JR, Neske A, Iramain MA, Alvarez PE, Bongiorno PL, Brandán SA. FT-IR, FT-Raman and UV-visible spectra of motrilin acetogenin isolated from Annona cherimolia. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.06.107] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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10
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Manzur ME, Brandán SA. S(-) and R(+) species derived from antihistaminic promethazine agent: structural and vibrational studies. Heliyon 2019; 5:e02322. [PMID: 31535039 PMCID: PMC6744594 DOI: 10.1016/j.heliyon.2019.e02322] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2019] [Revised: 05/19/2019] [Accepted: 08/13/2019] [Indexed: 01/18/2023] Open
Abstract
Structural and vibrational properties of free base, cationic and hydrochloride species derived from both S(-) and R(+) enantiomers of antihistaminic promethazine (PTZ) agent have been theoretically evaluated in gas phase and in aqueous solution by using the hybrid B3LYP/6-31G* calculations. The initial structures of S(-) and R(+) enantiomers of hydrochloride PTZ were those polymorphic forms 1 and 2 experimentally determined by X-ray diffraction. Here, all structures in aqueous solution were optimized at the same level of theory by using the polarized continuum (PCM) and the universal solvation model. As was experimentally reported, variations in the unit cell lead to slight energy, density, and melting point differences between the two forms but, this behavior is not carried through in isotropic condition, like in solution with non-chiral solvents. Hence, the N-C distances, Mulliken, atomic natural population (NPA) and Merz-Kollman (MK) charges, bond orders, stabilization and solvation energies, frontier orbitals, some descriptors and their topological properties were compared with the antihistaminic cyclizine agent. The frontier orbitals studies show that the free base species of both forms in solution are more reactive than cyclizine. Higher electrophilicity indexes are observed in the cationic and hydrochloride species of PTZ than cyclizine while the cationic species of cyclizine have higher nucleophilicity index than both species of PTZ. The presences of bands attributed to cationic species of both enantiomers are clearly supported by the infrared and Raman spectra in the solid phase. The expected 114, 117 and 120 vibration normal modes for the free base, cationic and hydrochloride species of both forms were completely assigned and the force constants reported. Reasonable concordances among the predicted infrared, Raman, UV-Vis and Electronic Circular Dichroism (ECD) with the corresponding experimental ones were found.
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Affiliation(s)
| | - Silvia Antonia Brandán
- Cátedra de Química General, Instituto de Química Inorgánica, Facultad de Bioquímica. Química y Farmacia, Universidad Nacional de Tucumán, Ayacucho 471, San Miguel de Tucumán, Tucumán, 4000, Argentina
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Iramain MA, Ledesma AE, Brandán SA. Structural properties and vibrational analysis of Potassium 5-Br-2-isonicotinoyltrifluoroborate salt. Effect of Br on the isonicotinoyl ring. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2019.02.010] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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12
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Rudyk RA, Checa MA, Catalán CA, Brandán SA. Structural, FT-IR, FT-Raman and ECD studies on the free base, cationic and hydrobromide species of scopolamine alkaloid. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.12.040] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Calado SLDM, Santos GS, Wojciechowski J, Magalhães VFD, Silva de Assis HC. The accumulation dynamics, elimination and risk assessment of paralytic shellfish toxins in fish from a water supply reservoir. THE SCIENCE OF THE TOTAL ENVIRONMENT 2019; 651:3222-3229. [PMID: 30463170 DOI: 10.1016/j.scitotenv.2018.10.046] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2018] [Revised: 09/27/2018] [Accepted: 10/03/2018] [Indexed: 06/09/2023]
Abstract
Paralytic shellfish Toxins (PSTs) or saxitoxins are neurotoxins that block the neural transmission by binding to the voltage-gated sodium channels in the nerve cells. There are >50 analogues described, which could be biotransformed into a molecular form of greater or lesser toxicity. The Alagados Reservoir is used for water supply, and persistent cyanobacterial blooms as well as PSTs concentrations have been found in this water body since 2002. The aims of this study were to quantify the concentrations of PSTs in the water and fish samples from the Alagados Reservoir. In addition, we evaluated the elimination of PSTs for 90 days in fish and estimated the potential risk to human health. Water and fish samples were collected from the reservoir. For the water samples the phytoplankton and chemical analyses were carried out. Fish were divided into two sample times: Field Samples (FS) and Elimination Experiment Samples (EES), which were maintained for 90 days in filtered and dechlorinated water. For chemical analysis, the muscles of FS were collected on the fish sampling day and the muscles and feces of EES were collected at 7, 15, 30, 45, 60, 75 and 90 days. PSTs concentrations were present in water and fish samples, and they were estimated as a potential risk to humans; mainly for children. In addition, toxins were accumulated, biotransformed to other analogues and excreted by the fish. However, after 90 days, the toxins were still present in the water and fish muscle. Therefore, PSTs can remain for a long period in water, and fish can be a carrier of these neurotoxins. New approaches of monitoring and management are necessary in the actual global context of cyanobacteria and cyanotoxins.
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Affiliation(s)
- Sabrina Loise de Morais Calado
- Ecology and Conservation Program Post-Graduation - Federal University of Paraná (UFPR), Box 19031, 81530-980 Curitiba, PR, Brazil.
| | - Gustavo Souza Santos
- Ecology and Conservation Program Post-Graduation - Federal University of Paraná (UFPR), Box 19031, 81530-980 Curitiba, PR, Brazil.
| | - Juliana Wojciechowski
- Ecology and Conservation Program Post-Graduation - Federal University of Paraná (UFPR), Box 19031, 81530-980 Curitiba, PR, Brazil.
| | - Valéria Freitas de Magalhães
- Institute of Biophysics Carlos Chagas Filho, Box 21941-902, Ilha do Fundão, Rio de Janeiro, Rio de Janeiro, Brazil.
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Kausteklis J, Aleksa V, Iramain MA, Brandán SA. DFT and vibrational spectroscopy study of 1-butyl-3-methylimidazolium trifluoromethanesulfonate ionic liquid. J Mol Struct 2019. [DOI: 10.1016/j.molstruc.2018.08.014] [Citation(s) in RCA: 25] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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15
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Ben M'leh C, Brandán SA, Issaoui N, Roisnel T, Marouani H. Synthesis, molecular structure, vibrational and theoretical studies of a new non-centrosymmetric organic sulphate with promising NLO properties. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.06.041] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Kausteklis J, Aleksa V, Iramain MA, Brandán SA. Effect of cation-anion interactions on the structural and vibrational properties of 1-buthyl-3-methyl imidazolium nitrate ionic liquid. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2018.03.100] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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17
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Castillo MV, Iramain MA, Davies L, Manzur ME, Brandán SA. Evaluation of the structural properties of powerful pesticide dieldrin in different media and their complete vibrational assignment. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.10.065] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Synthesis and characterization of p -xylylenediaminium bis(nitrate). Effects of the coordination modes of nitrate groups on their structural and vibrational properties. J Mol Struct 2018. [DOI: 10.1016/j.molstruc.2017.09.027] [Citation(s) in RCA: 41] [Impact Index Per Article: 6.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/18/2023]
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Castillo MV, Pergomet JL, Carnavale GA, Davies L, Zinczuk J, Brandán SA. FTIR, FTRaman, UV–Visible and NMR spectroscopic studies on 3,3′,4,4′-tetrachloroazoxybenzene, an azoxybenzene derivative with toxic effects. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.04.043] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Tsuchiya S, Cho Y, Yoshioka R, Konoki K, Nagasawa K, Oshima Y, Yotsu-Yamashita M. Synthesis and Identification of Key Biosynthetic Intermediates for the Formation of the Tricyclic Skeleton of Saxitoxin. Angew Chem Int Ed Engl 2017; 56:5327-5331. [DOI: 10.1002/anie.201612461] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2016] [Indexed: 11/09/2022]
Affiliation(s)
- Shigeki Tsuchiya
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Yuko Cho
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Renpei Yoshioka
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Keiichi Konoki
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Kazuo Nagasawa
- Faculty of Technology; Tokyo University of Agriculture and Technology; 2-24-16 Naka-cho, Koganei-shi Tokyo 184-8588 Japan
| | - Yasukatsu Oshima
- Graduate School of Life Sciences; Tohoku University; 2-1-1 Katahira, Aoba-ku Sendai 980-8577 Japan
| | - Mari Yotsu-Yamashita
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
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Tsuchiya S, Cho Y, Yoshioka R, Konoki K, Nagasawa K, Oshima Y, Yotsu-Yamashita M. Synthesis and Identification of Key Biosynthetic Intermediates for the Formation of the Tricyclic Skeleton of Saxitoxin. Angew Chem Int Ed Engl 2017. [DOI: 10.1002/ange.201612461] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
Affiliation(s)
- Shigeki Tsuchiya
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Yuko Cho
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Renpei Yoshioka
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Keiichi Konoki
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
| | - Kazuo Nagasawa
- Faculty of Technology; Tokyo University of Agriculture and Technology; 2-24-16 Naka-cho, Koganei-shi Tokyo 184-8588 Japan
| | - Yasukatsu Oshima
- Graduate School of Life Sciences; Tohoku University; 2-1-1 Katahira, Aoba-ku Sendai 980-8577 Japan
| | - Mari Yotsu-Yamashita
- Graduate School of Agricultural Science; Tohoku University; 468-1 Aramaki-Aza-Aoba, Aoba-ku Sendai 980-0845 Japan
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