Spatially resolved multidimensional cross-correlation relaxometry

Non-destructive classification of unlabeled cells: Combining an automated benchtop magnetic resonance scanner and artificial intelligence

In order to treat degenerative diseases, the importance of advanced therapy medicinal products has increased in recent years. The newly developed treatment strategies require a rethinking of the appropriate analytical methods. Current standards are missing the complete and sterile analysis of the product of interest to make the drug manufacturing effort worthwhile. They only consider partial areas of the sample or product while also irreversibly damaging the investigated specimen. Two-dimensional T1 / T2 MR relaxometry meets these requirements and is therefore a promising in-process control during the manufacturing and classification process of cell-based treatments. In this study a tabletop MR scanner was used to perform two-dimensional MR relaxometry. Throughput was increased by developing an automation platform based on a low-cost robotic arm, resulting in the acquisition of a large dataset of cell-based measurements. Two-dimensional inverse Laplace transformation was used for post-processing, followed by data classification performed with support vector machines (SVM) as well as optimized artificial neural networks (ANN). The trained networks were able to distinguish non-differentiated from differentiated MSCs with a prediction accuracy of 85%. To increase versatility, an ANN was trained on 354 independent, biological replicates distributed across ten different cell lines, resulting in a prediction accuracy of up to 98% depending on data composition. The present study provides a proof of principle for the application of T1 / T2 relaxometry as a non-destructive cell classification method. It does not require labeling of cells and can perform whole mount analysis of each sample. Since all measurements can be performed under sterile conditions, it can be used as an in-process control for cellular differentiation. This distinguishes it from other characterization techniques, as most are destructive or require some type of cell labeling. These advantages highlight the technique's potential for preclinical screening of patient-specific cell-based transplants and drugs.

Benchtop NMR for the monitoring of bioprocesses

This mini-review highlights the potential of benchtop nuclear magnetic resonance (NMR) for the monitoring of bioprocesses. It describes recent perspectives opened by the reduced size of devices in relaxometry, magnetic resonance imaging and NMR spectroscopy. In particular, the recent emergence of the benchtop NMR spectroscopy gives access to many applications thanks to the implementation of advanced experiments.

Spatially-resolved 1H NMR relaxation-exchange measurements in heterogeneous media

In the last decades, the ¹H NMR T₂-T₂ relaxation-exchange (REXSY) technique has become an essential tool for the molecular investigation of simple and complex fluids in heterogeneous porous solids and soft matter, where the mixing-time-evolution of cross-correlated T₂-T₂ peaks enables a quantitative study of diffusive exchange kinetics in multi-component systems. Here, we present a spatially-resolved implementation of the T₂-T₂ correlation technique, named z-T₂-T₂, based on one-dimensional spatial mapping along z using a rapid frequency-encode imaging scheme. Compared to other phase-encoding methods, the adopted MRI technique has two distinct advantages: (i) is has the same experimental duration of a standard (bulk) T₂-T₂ measurement, and (ii) it provides a high spatial resolution. The proposed z-T₂-T₂ method is first validated against bulk T₂-T₂ measurements on homogeneous phantom consisting of cyclohexane uniformly imbibed in finely-sized α-Al₂O₃ particles at a spatial resolution of 0.47 mm; thereafter, its performance is demonstrated, on a layered bed of multi-sized α-Al₂O₃ particles, for revealing spatially-dependent molecular exchange kinetics properties of intra- and inter-particle cyclohexane as a function of particle size. It is found that localised z-T₂-T₂ spectra provide well resolved cross peaks whilst such resolution is lost in standard bulk T₂-T₂ data. Future prospective applications of the method lie, in particular, in the local characterisation of mass transport phenomena in multi-component porous media, such as rock cores and heterogeneous catalysts.

MRI of plants and foods

The importance and prospects for MRI as applied to intact plants and to foods are presented in view of one of humanity's most pressing concerns, the sustainable and healthy feeding of a worldwide increasing population. Intact plants and foods have in common that their functionality is determined by complex multiple length scale architectures. Intact plants have an additional level of complexity since they are living systems which critically depend on transport and signalling processes between and within tissues and organs. The combination of recent cutting-edge technical advances and integration of MRI accessible parameters has the perspective to contribute to breakthroughs in understanding complex regulatory plant performance mechanisms. In food science and technology MRI allows for quantitative multi-length scale structural assessment of food systems, non-invasive monitoring of heat and mass transport during shelf-life and processing, and for a unique view on food properties under shear. These MRI applications are powerful enablers of rationally (re)designed food formulations and processes. Limitations and bottlenecks of the present plant and food MRI methods are mainly related to short T2 values and susceptibility artefacts originating from small air spaces in tissues/materials. We envisage cross-fertilisation of solutions to overcome these hurdles in MRI applications in plants and foods. For both application areas we witness a development where MRI is moving from highly specialised equipment to mobile and downscaled versions to be used by a broad user base in the field, greenhouse, food laboratory or factory.

Ultrafast T1-T2 relaxometry using FLOP sequences

By periodically flipping the longitudinal magnetisation with a chain of 180 degrees pulses it is possible to establish a steady-state of longitudinal polarisation that effectively stores the information of T(1) relaxation. The pulse sequence for achieving this, called steady-state Flipped LOngitudinal Polarisation (FLOP) can be used for the fast acquisition of a two-dimensional T(1)-T(2) relaxation time spectrum in both periodic and a-periodic modes. We have therefore called this new class of sequences periodic or a-periodic FLOP-T(1)-T(2).