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For: Marlowe AE, Singh A, Yingling YG. The effect of point mutations on structure and mechanical properties of collagen-like fibril: A molecular dynamics study. Materials Science and Engineering: C 2012. [DOI: 10.1016/j.msec.2012.07.044] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Number Cited by Other Article(s)
1
Gahlawat S, Nanda V, Shreiber DI. Designing collagens to shed light on the multi-scale structure-function mapping of matrix disorders. Matrix Biol Plus 2024;21:100139. [PMID: 38186852 PMCID: PMC10765305 DOI: 10.1016/j.mbplus.2023.100139] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 11/29/2023] [Accepted: 12/09/2023] [Indexed: 01/09/2024]  Open
2
Collier TA, Nash A, Birch HL, de Leeuw NH. Relative orientation of collagen molecules within a fibril: a homology model for homo sapiens type I collagen. J Biomol Struct Dyn 2018;37:537-549. [PMID: 29380684 DOI: 10.1080/07391102.2018.1433553] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
3
Nzabonimpa GS, Rasmussen HB, Brunak S, Taboureau O. Investigating the impact of missense mutations in hCES1 by in silico structure-based approaches. Drug Metab Pers Ther 2016;31:/j/dmdi.ahead-of-print/dmpt-2015-0034/dmpt-2015-0034.xml. [PMID: 26900165 DOI: 10.1515/dmpt-2015-0034] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Accepted: 01/04/2016] [Indexed: 12/23/2022]
4
Mechanical response of collagen molecule under hydrostatic compression. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2015;49:720-726. [DOI: 10.1016/j.msec.2015.01.032] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2014] [Revised: 11/07/2014] [Accepted: 01/06/2015] [Indexed: 11/20/2022]
5
A systematic framework for molecular dynamics simulations of protein post-translational modifications. PLoS Comput Biol 2013;9:e1003154. [PMID: 23874192 PMCID: PMC3715417 DOI: 10.1371/journal.pcbi.1003154] [Citation(s) in RCA: 73] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2013] [Accepted: 06/07/2013] [Indexed: 12/03/2022]  Open
6
Margreitter C, Petrov D, Zagrovic B. Vienna-PTM web server: a toolkit for MD simulations of protein post-translational modifications. Nucleic Acids Res 2013;41:W422-6. [PMID: 23703210 PMCID: PMC3692090 DOI: 10.1093/nar/gkt416] [Citation(s) in RCA: 114] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]  Open
7
Monti S, Bramanti E, Porta VD, Onor M, D'Ulivo A, Barone V. Interaction of collagen with chlorosulphonated paraffin tanning agents: Fourier transform infrared spectroscopic analysis and molecular dynamics simulations. Phys Chem Chem Phys 2013;15:14736-47. [DOI: 10.1039/c3cp52404c] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
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