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Kosmala D, Sertour N, Fróis Martins R, Spaggiari L, Ardizzoni A, LeibundGut-Landmann S, Pericolini E, Bougnoux ME, d'Enfert C, Legrand M. The pathogenic and colonization potential of Candida africana. Microbes Infect 2024; 26:105230. [PMID: 37734535 DOI: 10.1016/j.micinf.2023.105230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2023] [Revised: 09/12/2023] [Accepted: 09/17/2023] [Indexed: 09/23/2023]
Abstract
The Candida albicans population displays high genetic diversity illustrated by 18-well differentiated genetic clusters. Cluster 13, also known as Candida africana, is an outlying cluster and includes strains first described as atypical C. albicans isolates of vaginal origin, showing apparent tropism for the female genital tract. In our study, we combined in vitro, and in vivo models to explore the colonization and pathogenic potential of C. africana. We report that C. africana has similar fitness to C. albicans when it comes to colonization of the oral and vaginal mucosa, however it has decreased fitness in gastro-intestinal colonization and systemic infection. Interestingly, despite high population homogeneity, our in vitro data highlighted for the first time a variability in terms of growth rate, biofilm formation and filamentation properties between C. africana strains. Overall, our data lays the foundations for exploring specific features of C. africana that might contribute to its apparent niche restriction.
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Affiliation(s)
- Daria Kosmala
- Institut Pasteur, Université Paris Cité, INRAE USC2019, Unité Biologie et Pathogénicité Fongiques, Paris, France
| | - Natacha Sertour
- Institut Pasteur, Université Paris Cité, INRAE USC2019, Unité Biologie et Pathogénicité Fongiques, Paris, France
| | - Ricardo Fróis Martins
- Section of Immunology, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 260, Zurich 8057, Switzerland; Institute of Experimental Immunology, University of Zurich, Winterthurerstrasse 190, Zürich 8057, Switzerland
| | - Luca Spaggiari
- Clinical and Experimental Medicine Ph.D. Program, University of Modena and Reggio Emilia, Modena, Italy
| | - Andrea Ardizzoni
- Department of Surgical, Medical, Dental and Morphological Sciences with Interest in Transplant, Oncological and Regenerative Medicine, University of Modena and Reggio Emilia, Modena, Italy
| | - Salomé LeibundGut-Landmann
- Section of Immunology, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 260, Zurich 8057, Switzerland; Institute of Experimental Immunology, University of Zurich, Winterthurerstrasse 190, Zürich 8057, Switzerland
| | - Eva Pericolini
- Department of Surgical, Medical, Dental and Morphological Sciences with Interest in Transplant, Oncological and Regenerative Medicine, University of Modena and Reggio Emilia, Modena, Italy
| | - Marie-Elisabeth Bougnoux
- Institut Pasteur, Université Paris Cité, INRAE USC2019, Unité Biologie et Pathogénicité Fongiques, Paris, France; Unité de Parasitologie-Mycologie, Service de Microbiologie Clinique, Hôpital Necker-Enfants-Malades, Assistance Publique des Hôpitaux de Paris (APHP), Paris, France
| | - Christophe d'Enfert
- Institut Pasteur, Université Paris Cité, INRAE USC2019, Unité Biologie et Pathogénicité Fongiques, Paris, France.
| | - Mélanie Legrand
- Institut Pasteur, Université Paris Cité, INRAE USC2019, Unité Biologie et Pathogénicité Fongiques, Paris, France.
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Distribution, antifungal susceptibility pattern and intra-Candida albicans species complex prevalence of Candida africana: A systematic review and meta-analysis. PLoS One 2020; 15:e0237046. [PMID: 32817677 PMCID: PMC7440629 DOI: 10.1371/journal.pone.0237046] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2020] [Accepted: 07/17/2020] [Indexed: 12/18/2022] Open
Abstract
Candida africana is a pathogenic species within the Candida albicans species complex. Due to the limited knowledge concerning its prevalence and antifungal susceptibility profiles, a comprehensive study is overdue. Accordingly, we performed a search of the electronic databases for literature published in the English language between 1 January 2001 and 21 March 2020. Citations were screened, relevant articles were identified, and data were extracted to determine overall intra-C. albicans complex prevalence, geographical distribution, and antifungal susceptibility profiles for C. africana. From a total of 366 articles, 41 were eligible for inclusion in this study. Our results showed that C. africana has a worldwide distribution. The pooled intra-C. albicans complex prevalence of C. africana was 1.67% (95% CI 0.98–2.49). Prevalence data were available for 11 countries from 4 continents. Iran (3.02%, 95%CI 1.51–4.92) and Honduras (3.03%, 95% CI 0.83–10.39) had the highest values and Malaysia (0%) had the lowest prevalence. Vaginal specimens were the most common source of C. africana (92.81%; 155 out of 167 isolates with available data). However, this species has also been isolated from cases of balanitis, from patients with oral lesions, and from respiratory, urine, and cutaneous samples. Data concerning the susceptibility of C. africana to 16 antifungal drugs were available in the literature. Generally, the minimum inhibitory concentrations of antifungal drugs against this species were low. In conclusion, C. africana demonstrates geographical variation in prevalence and high susceptibility to antifungal drugs. However, due to the relative scarcity of existing data concerning this species, further studies will be required to establish more firm conclusions.
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Candida africana vulvovaginitis: Prevalence and geographical distribution. J Mycol Med 2020; 30:100966. [PMID: 32317216 DOI: 10.1016/j.mycmed.2020.100966] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2019] [Revised: 11/26/2019] [Accepted: 03/29/2020] [Indexed: 02/07/2023]
Abstract
Candida africana has been recovered principally as a causative agent of vulvovaginal candidiasis (VVC) from different countries, which is likely to be misidentified as the typical Candida albicans or Candida dubliniensis. The current study aimed to characterize C. albicans species complex obtained from VVC based on conventional and molecular assays. Furthermore, in vitro antifungal susceptibility testing was performed based on CLSI documents. Additionally, due to low knowledge concerning C. africana infections, we reviewed all published papers from 1991 to 2019. One hundred forty-four out of 287 patients were identified with Candida infection, among whom 151 isolates of Candida were obtained. Candida albicans 109 (72.1%), Candida glabrata 21 (13.9%), Candida krusei 8 (5.2%), Candida tropicalis 5 (3.3%), Candida africana 3 (1.9%), Candida parapsilosis 3 (1.9%) and C. dubliniensis 2 (1.3%) were isolated from patients. MIC results showed that C. africana isolates were susceptible to all tested antifungal drugs. Candida africana infections were more prevalent in Africa. One hundred fifteen (40.6%) of patients with C. africana candidiasis were from seven African countries, and Madagascar and Angola had the majority of cases. The epidemiological data, phenotypic, clinical features, ecologic similarity, and antifungal susceptibility profiles for better understanding of the pathogenic mechanisms and optimal treatment underlying non-CandidaalbicansCandida vulvovaginitis are highly recommended.
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Farahyar S, Izadi S, Razmjou E, Falahati M, Roudbary M, Ashrafi-Khozani M, Ansari S, Fattahi A, Ghahri-Mobaser Z, Rahimi M. Low prevalence of antifungal resistant Candida africana, in the C. albicans complex causing vulvovaginal candidiasis. Heliyon 2020; 6:e03619. [PMID: 32215332 PMCID: PMC7090347 DOI: 10.1016/j.heliyon.2020.e03619] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2019] [Revised: 09/24/2019] [Accepted: 03/13/2020] [Indexed: 01/31/2023] Open
Abstract
The Candida (C.) albicans complex includes C. albicans, C. dubliniensis, C. stellatoidea, and C. africana, with the last mentioned as an important emerging agent of vulvovaginal candidiasis (VVC). The aim of the study was to identify C. africana and C. dubliniensis and assess their drug susceptibility in vaginitis. One-hundred Candida isolates of the C. albicans complex from women diagnosed with vaginitis and from vaginal samples in the culture collection of a medical mycology laboratory were examined. Species of the C. albicans complex were identified with conventional and molecular methods using polymerase chain reaction (PCR) for amplification and sequencing of the internal transcribed spacer (ITS) region, PCR for partial amplification of hyphal wall protein 1 (HWP1) gene and duplex PCR. The effects of antifungal drugs were evaluated according to standard broth microdilution protocols. Ninety-seven C. albicans (97%) and three C. africana (3%) isolates were identified. Results of susceptibility testing revealed one isolate of C. africana to be resistant to both clotrimazole and fluconazole, and one showed reduced susceptibility to itraconazole. Identification of Candida species especially C. africana in vaginitis is crucial, there are varying levels of resistance to antifungal drugs.
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Affiliation(s)
- Shirin Farahyar
- Microbial Biotechnology Research Center (MBiRC), Iran University of Medical Sciences, Tehran, Iran.,Department of Medical Parasitology and Mycology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Samira Izadi
- Department of Medical Parasitology and Mycology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Elham Razmjou
- Department of Medical Parasitology and Mycology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Mehraban Falahati
- Department of Medical Parasitology and Mycology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Maryam Roudbary
- Department of Medical Parasitology and Mycology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Mahtab Ashrafi-Khozani
- Department of Medical Parasitology and Mycology, School of Medicine, Iran University of Medical Sciences, Tehran, Iran
| | - Saham Ansari
- Department of Medical Parasitology and Mycology, School of Medicine, Shahid Beheshti, University of Medical Sciences, Tehran, Iran
| | - Azam Fattahi
- Center for Research and Training in Skin Diseases and Leprosy, Tehran University of Medical Sciences, Tehran, Iran
| | | | - Maryam Rahimi
- Department of Gynecology, Shahid Akbar Abadi Hospital, Iran University of Medical Sciences, Tehran, Iran
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Identification of Cryptic Species of Four Candida Complexes in a Culture Collection. J Fungi (Basel) 2019; 5:jof5040117. [PMID: 31861048 PMCID: PMC6958398 DOI: 10.3390/jof5040117] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2019] [Revised: 12/13/2019] [Accepted: 12/15/2019] [Indexed: 01/11/2023] Open
Abstract
Candida spp. are one of the most common causes of fungal infections worldwide. The taxonomy of Candida is controversial and has undergone recent changes due to novel genetically related species. Therefore, some complexes of cryptic species have been proposed. In clinical settings, the correct identification of Candida species is relevant since some species are associated with high resistance to antifungal drugs and increased virulence. This study aimed to identify the species of four Candida complexes (C. albicans, C. glabrata, C. parapsilosis, and C. haemulonii) by molecular methods. This is the first report of six cryptic Candida species in Honduras: C. dubliniensis, C. africana, C. duobushaemulonii, C. orthopsilosis, and C. metapsilosis, and it is also the first report of the allele hwp1-2 of C. albicans sensu stricto. It was not possible to demonstrate the existence of C. auris among the isolates of the C. haemulonii complex. We also propose a simple method based on PCR-RFLP for the discrimination of the multi-resistant pathogen C. auris within the C. haemulonii complex.
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Denega I, d'Enfert C, Bachellier-Bassi S. Candida albicans Biofilms Are Generally Devoid of Persister Cells. Antimicrob Agents Chemother 2019; 63:e01979-18. [PMID: 30783002 PMCID: PMC6496073 DOI: 10.1128/aac.01979-18] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2018] [Accepted: 02/10/2019] [Indexed: 11/20/2022] Open
Abstract
Candida albicans is known for its ability to form biofilms, which are communities of microorganisms embedded in an extracellular matrix developing on different surfaces. Biofilms are highly tolerant to antifungal therapy. This phenomenon has been partially explained by the appearance of so-called persister cells, phenotypic variants of wild-type cells, capable of surviving very high concentrations of antimicrobial agents. Persister cells in C. albicans were found exceptionally in biofilms, while none were detected in planktonic cultures of this fungus. Yet, this topic remains controversial, as others could not observe persister cells in biofilms formed by the C. albicans SC5314 laboratory strain. Due to ambiguous data in the literature, this work aimed to reevaluate the presence of persister cells in C. albicans biofilms. We demonstrated that the isolation of C. albicans "persister cells" as described previously was likely to be the result of the survival of biofilm cells that were not reached by the antifungal. We tested biofilms of SC5314 and its derivatives, as well as 95 clinical isolates, using an improved protocol, demonstrating that persister cells are not a characteristic trait of C. albicans biofilms. Although some clinical isolates are able to yield survivors upon the antifungal treatment of biofilms, this phenomenon is rather stochastic and inconsistent.
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Affiliation(s)
- Iryna Denega
- Institut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France
- Université Paris Diderot, Sorbonne Paris Cité, Paris, France
| | - Christophe d'Enfert
- Institut Pasteur, INRA, Unité Biologie et Pathogénicité Fongiques, Paris, France
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[Clinical and mycological characteristics of onychomycosis due to Candida at Institut Pasteur of Côte d'Ivoire]. J Mycol Med 2017; 28:167-172. [PMID: 29126627 DOI: 10.1016/j.mycmed.2017.10.003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2017] [Revised: 10/06/2017] [Accepted: 10/07/2017] [Indexed: 11/23/2022]
Abstract
OBJECTIVE This study aims to study the clinical and mycological characteristics of onychomycosis due to Candida in mycology unit of Institut Pasteur of Côte d'Ivoire. PATIENTS AND METHODS This is a retrospective study which was carried out on patients from 1990 to 2016 for mycological diagnosis of onychomycosis and which socio-demographic characteristics, direct examination and culture results were recorded. RESULTS In this study, 1898 patient files were selected. The average age of the patients was 31.69 years (standard deviation=15.11) with a sex ratio of 0.87. The frequency of Candida onychomycosis from patients received was 61.7%. Finger nails (67.7%) were more affected by this condition, followed by those of the toes (25.3%). Ninety cases of double localization of the nails of the hands and toes have been found. Candida albicans was the most frequent species accounting for 79.1% of isolated yeasts. Among the non-albicans, C. parapsilosis and C. tropicalis were isolated at the level of the toenails with frequencies rate of 11.2 and 9.6%. CONCLUSION Onychomycosis due to Candida are relatively common in Abidjan and are dominated by C. albicans. The mycological confirmation of the fungal etiology in onychopathy and a good hygiene of the nails will allow a better management.
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Konaté A, Barro-Kiki PCM, Kassi KF, Angora KE, Vanga-Bosson H, Djohan V, Bédia-Tanoh AV, Miézan AJS, Yavo W, Menan EIH. Oropharyngeal candidiasis prevalence among HIV-infected patients at the teaching hospital of Treichville (Abidjan, Côte d'Ivoire). J Mycol Med 2017; 27:549-553. [PMID: 28867257 DOI: 10.1016/j.mycmed.2017.08.005] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2017] [Revised: 08/08/2017] [Accepted: 08/10/2017] [Indexed: 11/15/2022]
Abstract
AIM OF THE STUDY The aim of this study was to determine the mycological profile of oropharyngeal candidiasis among HIV-infected patients from Internal Medicine, Infectious and Tropical Diseases, and Pneumo-Phthisiology Diseases departments of the Teaching Hospital of Treichville in Abidjan, Côte d'Ivoire. PATIENTS AND METHODS This was a cross-sectional study carried out on patients with lesions suggestive of oropharyngeal candidiasis from October 2010 to April 2011. Oral swabs were cultured, and Candida species were identified using a germ tube test, a chlamydospore formation assay, and the API 20C system. RESULTS A total of 286 patients were included, among whom 99.1% were infected with HIV. The prevalence of oropharyngeal candidiasis was 79.4% (CI95%=74.4-83.8). Five different species of Candida were identified, with the predominant species being Candida albicans (95.2%). Most affected patients were female (54.6%, P<0.0001) between the ages of 30 and 45 (78.4%, P<0.0001). The most lesion types observed were thrush (87.8%). Patients infected with HIV1 (95.6%), with a primary school level of education (52.8%), under antiretroviral therapy (88.5%) and with tuberculosis as an associated pathology (62.5%) were the most commonly affected. Patients were mostly under ART first line treatment (86.4%) and at the beginning of the treatment (86.4%). CONCLUSION Oropharyngeal candidiasis is frequent among HIV-infected patients. Better and early management of this vulnerable population should allow for a reduction in the high prevalence observed.
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Affiliation(s)
- A Konaté
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire; Laboratory of Parasitology and Mycology, Teaching Hospital of Yopougon, 21 BP 632, Abidjan 21, Cote d'Ivoire.
| | - P C M Barro-Kiki
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire
| | - K F Kassi
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire; Laboratory of Parasitology And Mycology of the Diagnosis and Research Centre on AIDS and the others infectious diseases, 01 BPV 13, Abidjan, Cote d'Ivoire
| | - K E Angora
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire
| | - H Vanga-Bosson
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire
| | - V Djohan
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire
| | - A V Bédia-Tanoh
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire
| | - A J S Miézan
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire
| | - W Yavo
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire
| | - E I H Menan
- Department of parasitology, Mycology, Animal Biology and Zoology, Felix-Houphouët-Boigny University, BPV 34, Abidjan, Cote d'Ivoire; Laboratory of Parasitology And Mycology of the Diagnosis and Research Centre on AIDS and the others infectious diseases, 01 BPV 13, Abidjan, Cote d'Ivoire
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Hazirolan G, Altun HU, Gumral R, Gursoy NC, Otlu B, Sancak B. Prevalence of Candida africana and Candida dubliniensis, in vulvovaginal candidiasis: First Turkish Candida africana isolates from vulvovaginal candidiasis. J Mycol Med 2017. [PMID: 28641919 DOI: 10.1016/j.mycmed.2017.04.106] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
INTRODUCTION Candida africana and C. dubliniensis are closely related species of C. albicans. Current phenotypic methods are not suitable to accurately distinguish all the species belonging to the C. albicans complex. Several molecular-based methods have recently been designed for discriminating among closely related Candida species. The aim of this study was to establish the prevalence of C. dubliniensis and C. africana in vulvovaginal samples with phenotypic and genotypic methods. MATERIALS AND METHODS We re-examined 376 vulvovaginal C. albicans complex isolates. All the isolates were identified with morphological features and HWP1 gene polymorphisms. ITS and D1/D2 sequencing, carbohydrate assimilation, MALDI-TOF MS profiles and antifungal susceptibilities were evaluated for C. africana and C. dubliniensis isolates. RESULTS Of the 376 isolates, three C. africana and three C. dubliniensis isolates (0.8% and 0.8% prevalence, respectively) were identified by molecular methods (HPW1, ITS and D1/D2) Phenotypically, C. africana differed from C. albicans and C. dubliniensis by formation of no/rare pseudohyphae, absence of chlamydospores and, the development of turquoise green colonies on CHROMagar. MALDI-TOF MS and API ID 32C could not revealed C. africana isolates. C. africana and C. dubliniensis isolates showed very low MIC values for all the tested antifungals. DISCUSSION This first report of C. africana from Turkey provides additional data for epidemiological, phenotypic features and antimicrobial susceptibility profiles. This study also highlights the importance of using genotypic methods in combination with phenotypic methods.
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Affiliation(s)
- G Hazirolan
- Department of microbiology, Ankara Numune training and research hospital, Ulku Mahallesi Talatpasa Bulvari No:5 Altindag, 06100 Ankara, Turkey.
| | - H U Altun
- Department of medical microbiology, Turgut Ozal university faculty of medicine, Ayvalı Mah.,Gazze Cad No:7, 06010 Etlik-Keçiören-Ankara, Turkey
| | - R Gumral
- Department of microbiology, Gulhane military medical academy, GATA, 06010 Keçiören-Ankara, Turkey
| | - N C Gursoy
- Department of microbiology, faculty of medicine, university of Inönü, 44000 Üzümlü-Malatya Merkez-Malatya, Turkey
| | - B Otlu
- Department of microbiology, faculty of medicine, university of Inönü, 44000 Üzümlü-Malatya Merkez-Malatya, Turkey
| | - B Sancak
- Department of microbiology, faculty of medicine, university of Hacettepe, Hacettepe university medicine, faculty Sıhhiye, 06100, Ankara, Turkey
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Chowdhary A, Hagen F, Sharma C, Al-Hatmi AMS, Giuffrè L, Giosa D, Fan S, Badali H, Felice MR, de Hoog S, Meis JF, Romeo O. Whole Genome-Based Amplified Fragment Length Polymorphism Analysis Reveals Genetic Diversity in Candida africana. Front Microbiol 2017; 8:556. [PMID: 28421052 PMCID: PMC5377543 DOI: 10.3389/fmicb.2017.00556] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2016] [Accepted: 03/16/2017] [Indexed: 01/12/2023] Open
Abstract
This study aimed at investigating the genetic diversity of a panel of Candida africana strains recovered from vaginal samples in different countries. All fungal strains were heterozygous at the mating-type-like locus and belonged to the genotype A of Candida albicans. Moreover, all examined C. africana strains lack N-acetylglucosamine assimilation and sequence analysis of the HXK1 gene showed a distinctive polymorphism that impair the utilization of this amino sugar in this yeast. Multi-locus sequencing of seven housekeeping genes revealed a substantial genetic homogeneity among the strains, except for the CaMPIb, SYA1 and VPS13 loci which contributed significantly to the classification of our set of C. africana strains into six existing diploid sequence types. Amplified fragment length polymorphism fingerprint analysis yielded greater genotypic heterogeneity among the C. africana strains. Overall the data reported here show that in C. africana genetic diversity occurs and the existence of this intriguing group of C. albicans strains with specific phenotypes associated could be useful for future comparative studies in order to better understand the genetics and evolution of this important human pathogen.
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Affiliation(s)
- Anuradha Chowdhary
- Department of Medical Mycology, Vallabhbhai Patel Chest Institute, University of DelhiNew Delhi, India
| | - Ferry Hagen
- Department of Medical Microbiology and Infectious Diseases, Canisius-Wilhelmina HospitalNijmegen, Netherlands
| | - Cheshta Sharma
- Department of Medical Mycology, Vallabhbhai Patel Chest Institute, University of DelhiNew Delhi, India
| | - Abdullah M S Al-Hatmi
- Westerdijk Fungal Biodiversity InstituteUtrecht, Netherlands.,Directorate General of Health Services, Ministry of Health, Ibri HospitalIbri, Oman
| | - Letterio Giuffrè
- Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of MessinaMessina, Italy
| | - Domenico Giosa
- Scientific Institute for Research, Hospitalization and Health Care - Centro Neurolesi "Bonino-Pulejo",Messina, Italy
| | - Shangrong Fan
- Department of Obstetrics and Gynecology, Peking University Shenzhen HospitalShenzhen, China
| | - Hamid Badali
- Department of Medical Mycology and Parasitology, Invasive Fungi Research Center, School of Medicine, Mazandaran University of Medical SciencesSari, Iran
| | - Maria Rosa Felice
- Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of MessinaMessina, Italy
| | - Sybren de Hoog
- Westerdijk Fungal Biodiversity InstituteUtrecht, Netherlands
| | - Jacques F Meis
- Department of Medical Microbiology and Infectious Diseases, Canisius-Wilhelmina HospitalNijmegen, Netherlands.,Center of Expertise in Mycology Radboudumc/Canisius-Wilhelmina ZiekenhuisNijmegen, Netherlands
| | - Orazio Romeo
- Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of MessinaMessina, Italy.,Scientific Institute for Research, Hospitalization and Health Care - Centro Neurolesi "Bonino-Pulejo",Messina, Italy
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Badiane AS, Ndiaye D, Denning DW. Burden of fungal infections in Senegal. Mycoses 2016; 58 Suppl 5:63-9. [PMID: 26449509 DOI: 10.1111/myc.12381] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2015] [Revised: 07/14/2015] [Accepted: 07/14/2015] [Indexed: 11/30/2022]
Abstract
Senegal has a high rate of tuberculosis and a low HIV seropositivity rate and aspergilloma, life-threatening fungal infections, dermatophytosis and mycetoma have been reported in this study. All published epidemiology papers reporting fungal infection rates from Senegal were identified. Where no data existed, we used specific populations at risk and fungal infection frequencies in each to estimate national incidence or prevalence. The results show that tinea capitis is common being found in 25% of children, ~1.5 million. About 191,000 Senegalese women get recurrent vaginal thrush, ≥4 times annually. We estimate 685 incident cases of chronic pulmonary aspergillosis (CPA) following TB and prevalence of 2160 cases. Asthma prevalence in adults varies from 3.2% to 8.2% (mean 5%); 9976 adults have allergic bronchopulmonary aspergillosis (ABPA) and 13,168 have severe asthma with fungal sensitisation (SAFS). Of the 59,000 estimated HIV-positive patients, 366 develop cryptococcal meningitis; 1149 develop Pneumocystis pneumonia and 1946 develop oesophageal candidiasis, in which oral candidiasis (53%) and dermatophytosis (16%) are common. Since 2008-2010, 113 cases of mycetoma were diagnosed. In conclusion, we estimate that 1,743,507 (12.5%) people in Senegal suffer from a fungal infection, excluding oral candidiasis, fungal keratitis, invasive candidiasis or aspergillosis. Diagnostic and treatment deficiencies should be rectified to allow epidemiological studies.
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Affiliation(s)
| | | | - David W Denning
- The National Aspergillosis Centre, University Hospital of South Manchester, The University of Manchester, The Manchester Academic Health Science Centre, Manchester, UK
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Felice MR, Gulati M, Giuffrè L, Giosa D, Di Bella LM, Criseo G, Nobile CJ, Romeo O, Scordino F. Molecular Characterization of the N-Acetylglucosamine Catabolic Genes in Candida africana, a Natural N-Acetylglucosamine Kinase (HXK1) Mutant. PLoS One 2016; 11:e0147902. [PMID: 26808192 PMCID: PMC4726466 DOI: 10.1371/journal.pone.0147902] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/12/2015] [Accepted: 01/11/2016] [Indexed: 01/09/2023] Open
Abstract
Background In this study we report the genetic characterization, including expression analysis, of the genes involved in the uptake (NGT1) and catabolism (HXK1/NAG5, DAC1/NAG2, NAG1) of the aminosugar N-acetylglucosamine (GlcNAc) in Candida africana, a pathogenic biovariant of Candida albicans that is naturally unable to assimilate the GlcNAc. Results DNA sequence analysis of these genes revealed a number of characteristic nucleotide substitutions including a unique and distinctive guanine insertion that shifts the reading frame and generates a premature stop codon (TGA) 154 bp downstream of the ATG start codon of the HXK1 gene encoding the GlcNAc-kinase, a key enzyme of the GlcNAc catabolic pathway. However, all examined genes produced transcripts even though different levels of expression were observed among the Candida isolates examined. In particular, we found an HXK1-idependent relationship of the NGT1 gene and a considerable influence of the GlcNAc-kinase functionality on the transcription of the DAC1 and NAG1 genes. Additional phenotypic analysis revealed that C. africana isolates are hyperfilamentous in the first 24-48h of growth on filament-inducing media and revert to the yeast morphological form after 72h of incubation on these media. Conclusions Our results show that C. africana is a natural HXK1 mutant, displaying a number of phenotypic characteristics distinct from typical C. albicans isolates.
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Affiliation(s)
- Maria Rosa Felice
- Department of Biological and Environmental Sciences, University of Messina, Messina, Italy
| | - Megha Gulati
- Department of Molecular and Cell Biology, University of California Merced, Merced, California, United States of America
| | - Letterio Giuffrè
- Department of Biological and Environmental Sciences, University of Messina, Messina, Italy
| | - Domenico Giosa
- Department of Biological and Environmental Sciences, University of Messina, Messina, Italy
| | - Luca Marco Di Bella
- Department of Biological and Environmental Sciences, University of Messina, Messina, Italy
| | - Giuseppe Criseo
- Department of Biological and Environmental Sciences, University of Messina, Messina, Italy
| | - Clarissa J. Nobile
- Department of Molecular and Cell Biology, University of California Merced, Merced, California, United States of America
| | - Orazio Romeo
- Department of Biological and Environmental Sciences, University of Messina, Messina, Italy
- Scientific Institute for Research, Hospitalization and Health Care (IRCCS)—Centro Neurolesi "Bonino-Pulejo", Messina, Italy
- * E-mail:
| | - Fabio Scordino
- Scientific Institute for Research, Hospitalization and Health Care (IRCCS)—Centro Neurolesi "Bonino-Pulejo", Messina, Italy
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Rodríguez-Leguizamón G, Fiori A, López LF, Gómez BL, Parra-Giraldo CM, Gómez-López A, Suárez CF, Ceballos A, Van Dijck P, Patarroyo MA. Characterising atypical Candida albicans clinical isolates from six third-level hospitals in Bogotá, Colombia. BMC Microbiol 2015; 15:199. [PMID: 26438104 PMCID: PMC4594647 DOI: 10.1186/s12866-015-0535-0] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/25/2015] [Accepted: 09/25/2015] [Indexed: 12/23/2022] Open
Abstract
BACKGROUND Candida species are the most frequently found fungal pathogens causing nosocomial disease in a hospital setting. Such species must be correctly identified to ensure that appropriate control measures are taken and that suitable treatment is given for each species. Candida albicans is causing most fungal disease burden worldwide; the challenge lies in differentiating it from emerging atypical, minor and related species such as Candida dubliniensis and Candida africana. The purpose of this study was to compare identification based on MALDI-TOF MS to standard identification systems using a set of nosocomial isolates. METHODS Eleven nosocomial samples were collected from 6 third-level hospitals in Bogotá, Colombia. All the samples were identified by combining MALDI-TOF MS with morphological characters, carbohydrate assimilation and molecular markers (D1/D2 and HWP1). RESULTS The present work describes the first collection of atypical Colombian Candida clinical isolates; these were identified as Candida albicans/Candida africana by their MALDI-TOF MS profile. Phenotypical characteristics showed that they were unable to produce chlamydospores, assimilate trehalose, glucosamine, N- acetyl-glucosamine and barely grew at 42 °C, as would be expected for Candida africana. The molecular identification of the D1/D2 region of large subunit ribosomal RNA and HWP1 hyphal cell wall protein 1 sequences from these isolates was consistent with those for Candida albicans. The mass spectra obtained by MALDI-TOF MS were analysed by multi-dimensional scaling (MDS) and cluster analysis, differences being revealed between Candida albicans, Candida africana, Candida dubliniensis reference spectra and two clinical isolate groups which clustered according to the clinical setting, one of them being clearly related to C. albicans. CONCLUSION This study highlights the importance of using MALDI-TOF MS in combination with morphology, substrate assimilation and molecular markers for characterising Candida albicans-related and atypical C. albicans species, thereby overcoming conventional identification methods. This is the first report of hospital-obtained isolates of this type in Colombia; the approach followed might be useful for gathering knowledge regarding local epidemiology which could, in turn, have an impact on clinical management. The findings highlight the complexity of distinguishing between typical and atypical Candida albicans isolates in hospitals.
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Affiliation(s)
- Giovanni Rodríguez-Leguizamón
- School of Medicine and Health Sciences, Universidad del Rosario, Bogotá, Colombia. .,VIB Department of Molecular Microbiology, Leuven, Belgium. .,KU Leuven Laboratory of Molecular Cell Biology, Leuven, Belgium.
| | - Alessandro Fiori
- VIB Department of Molecular Microbiology, Leuven, Belgium. .,KU Leuven Laboratory of Molecular Cell Biology, Leuven, Belgium.
| | - Luisa F López
- Medical and Experimental Mycology Unit, Corporación para las Investigaciones Biológicas (CIB), Medellín, Colombia.
| | - Beatriz L Gómez
- School of Medicine and Health Sciences, Universidad del Rosario, Bogotá, Colombia. .,Medical and Experimental Mycology Unit, Corporación para las Investigaciones Biológicas (CIB), Medellín, Colombia.
| | - Claudia M Parra-Giraldo
- Infectious Diseases Research Group, Microbiology Department, Pontificia Universidad Javeriana, Bogotá, Colombia.
| | - Arley Gómez-López
- Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá, Colombia.
| | - Carlos F Suárez
- School of Medicine and Health Sciences, Universidad del Rosario, Bogotá, Colombia. .,Biomathematics Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá, Colombia.
| | - Andrés Ceballos
- Infectious Diseases Research Group, Microbiology Department, Pontificia Universidad Javeriana, Bogotá, Colombia.
| | - Patrick Van Dijck
- VIB Department of Molecular Microbiology, Leuven, Belgium. .,KU Leuven Laboratory of Molecular Cell Biology, Leuven, Belgium.
| | - Manuel A Patarroyo
- School of Medicine and Health Sciences, Universidad del Rosario, Bogotá, Colombia. .,Molecular Biology and Immunology Department, Fundación Instituto de Inmunología de Colombia (FIDIC), Bogotá, Colombia.
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Molecular Characterization of Highly Susceptible Candida africana from Vulvovaginal Candidiasis. Mycopathologia 2015; 180:317-23. [DOI: 10.1007/s11046-015-9924-z] [Citation(s) in RCA: 36] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2015] [Accepted: 07/06/2015] [Indexed: 10/23/2022]
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Nenoff P, Reinel D, Krüger C, Grob H, Mugisha P, Süß A, Mayser P. Tropen- und Reise-assoziierte Dermatomykosen. Hautarzt 2015; 66:522-32. [DOI: 10.1007/s00105-015-3635-8] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
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Ngouana TK, Krasteva D, Drakulovski P, Toghueo RK, Kouanfack C, Ambe A, Reynes J, Delaporte E, Boyom FF, Mallié M, Bertout S. Investigation of minor species Candida africana, Candida stellatoidea and Candida dubliniensis in the Candida albicans complex among Yaoundé (Cameroon) HIV-infected patients. Mycoses 2014; 58:33-9. [PMID: 25289589 DOI: 10.1111/myc.12266] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2014] [Revised: 08/31/2014] [Accepted: 09/01/2014] [Indexed: 01/23/2023]
Abstract
Minor species of the Candida albicans complex may cause overestimation of the epidemiology of C. albicans, and misidentifications could mask their implication in human pathology. Authors determined the occurrence of minor species of the C. albicans complex (C. africana, C. dubliniensis and C. stellatoidea) among Yaoundé HIV-infected patients, Cameroon. Stool, vaginal discharge, urine and oropharyngeal samples were analysed by mycological diagnosis. Isolates were identified by conventional methods and mass spectrometry (MS; carried out by the matrix-assisted laser desorption-ionisation time-of-flight MS protocol). Candida albicans isolates were thereafter submitted to the PCR amplification of the Hwp1 gene. The susceptibility of isolates to antifungal drugs was tested using the Clinical and Laboratory Standards Institute M27-A3 protocol. From 115 C. albicans obtained isolates, neither C. dubliniensis nor C. stellatoidea was observed; two strains of C. africana (422PV and 448PV) were identified by PCR electrophoretic profiles at 700 bp. These two C. africana strains were vaginal isolates. The isolate 448PV was resistant to ketoconazole at the minimal inhibitory concentration of 2 μg ml(-1), and showed reduced susceptibility to amphotericin B at 1 μg ml(-1). This first report on C. africana occurrence in Cameroon brings clues for the understanding of the global epidemiology of this yeast as well as that of minor species of the C. albicans complex.
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Affiliation(s)
- Thierry K Ngouana
- Clinical Biology Laboratory, Yaoundé Central Hospital, Yaoundé, Cameroon; Laboratoire de Parasitologie et Mycologie Médicale UFR Pharmacie, UMI 233 UM1-IRD-UCAD-UY1 «TransVIHMI», Université de Montpellier 1, Montpellier, France; Antimicrobial Agents Unit (AMAU), Laboratory for Phytobiochemistry and Medicinal Plants Studies, Department of Biochemistry, Faculty of Science, University of Yaoundé I, Yaoundé, Cameroon
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Konate A, Yavo W, Kassi KF, Djohan V, Angora KE, Bosson-Vanga H, Barro-Kiki P, E I H Menan. [Onychomycosis mycological profile in Abidjan (Cote d'Ivoire)]. J Mycol Med 2014; 24:205-10. [PMID: 24751943 DOI: 10.1016/j.mycmed.2014.03.001] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2013] [Revised: 02/18/2014] [Accepted: 03/04/2014] [Indexed: 10/25/2022]
Abstract
AIM OF THE STUDY The epidemiological profile of onychomycosis is poorly determined in Cote d'Ivoire. This study aimed to determine the fungal aetiologies of these onychomycosis in Abidjan. PATIENTS AND METHODS This cross-sectional study was conducted from February to August 2011 at the Department of Dermatology of the University Hospital of Treichville. All patients who consulted for onycholysis were interviewed. All samples were analyzed by direct examination and Sabouraud-chloramphenicol and Sabouraud-chloramphenicol-actidione culture was performed. Species identification was based on microscopic characteristics of the fungus observed. RESULTS A total of 53 patients were included. The prevalence of onychomycosis was estimated at 66%. The unilateral lesions were statistically different from bilateral lesions (P=0.010). Women were more affected at the hands than men (P=0.010). Five species of yeasts and two dermatophytes species were identified. Yeasts species were essentially Candida tropicalis (36.4%) and Candida albicans (30.3%). Trichophyton rubrum and Trichophyton soudanense were the only dermatophytes isolated. No contributing factors were statistically related to the occurrence of onychomycosis in our series. CONCLUSION The observed onychomycosis in Côte d'Ivoire are mainly caused by yeasts. Although in our series the risk factors have not been identified, hygiene of the nails should provide effective prevention.
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Affiliation(s)
- A Konate
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire; Laboratoire de parasitologie-mycologie, CHU de Yopougon, 21 BP 632 , Abidjan, Côte d'Ivoire.
| | - W Yavo
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire
| | - K F Kassi
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire; Laboratoire de parasitologie-mycologie, Centre de diagnostic et de recherche sur le sida et les maladies opportunistes, 01 BPV 13, Abidjan, Côte d'Ivoire
| | - V Djohan
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire
| | - K E Angora
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire
| | - H Bosson-Vanga
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire
| | - P Barro-Kiki
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire
| | - E I H Menan
- Laboratoire de parasitologie-mycologie, centre hospitalier universitaire de Yopougon, 21, BP 632 Abidjan 21, Abidjan, Côte d'Ivoire; Laboratoire de parasitologie-mycologie, Centre de diagnostic et de recherche sur le sida et les maladies opportunistes, 01 BPV 13, Abidjan, Côte d'Ivoire
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Sharma C, Muralidhar S, Xu J, Meis JF, Chowdhary A. Multilocus sequence typing ofCandida africanafrom patients with vulvovaginal candidiasis in New Delhi, India. Mycoses 2014; 57:544-52. [DOI: 10.1111/myc.12193] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2014] [Accepted: 03/04/2014] [Indexed: 11/27/2022]
Affiliation(s)
- Cheshta Sharma
- Department of Medical Mycology; Vallabhbhai Patel Chest Institute; University of Delhi; Delhi India
| | - Sumathi Muralidhar
- Regional STD Teaching, Training & Research Center; Vardhman Mahavir Medical College & Safdarjang Hospital; New Delhi India
| | - Jianping Xu
- Department of Biology; McMaster University; Hamilton Ontario Canada
| | - Jacques F. Meis
- Department of Medical Microbiology; Radboud University Medical Centre; Nijmegen The Netherlands
- Department of Medical Microbiology and Infectious Diseases; Canisius-Wilhelmina Hospital; Nijmegen The Netherlands
| | - Anuradha Chowdhary
- Department of Medical Mycology; Vallabhbhai Patel Chest Institute; University of Delhi; Delhi India
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Yazdanpanah A, Khaithir TMN. Issues in identifying germ tube positive yeasts by conventional methods. J Clin Lab Anal 2013; 28:1-9. [PMID: 24375729 DOI: 10.1002/jcla.21635] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/22/2012] [Accepted: 05/08/2013] [Indexed: 11/06/2022] Open
Abstract
Candida speciation is vital for epidemiology and management of candidiasis. Nonmolecular conventional methods often fail to identify closely related germ tube positive yeasts from clinical specimens. The present study was conducted to identify these yeasts and to highlight issues in conventional versus molecular methods of identification. A total of 98 germ tube positive yeasts from high vaginal swabs were studied over a 12-month period. Isolates were examined with various methods including growth at 42 °C and 45 °C on Sabouraud dextrose agar (SDA), color development on CHROMagar Candida medium, chlamydospore production on corn meal agar at 25 °C, carbohydrate assimilation using ID 32C system, and polymerase chain reaction using a single pair of primers targeting the hyphal wall protein 1 (Hwp1) gene. Of all the isolates studied, 97 were molecularly confirmed as C. albicans and one isolate was identified as C. dubliniensis. No C. africana was detected in this study. The molecular method used in our study was an accurate and useful tool for discriminating C. albicans, C. dubliniensis, and C. africana. The conventional methods, however, were less accurate and riddled with many issues that will be discussed in further details.
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Affiliation(s)
- Atta Yazdanpanah
- Department of Medical Microbiology & Immunology, Universiti Kebangsaan Malaysia Medical Centre (UKMMC), Jalan Yaacob Latif, Bandar Tun Razak, Kuala Lumpur, Malaysia
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