Multi-modal and multi-subject modular organization of human brain networks

A spatially constrained independent component analysis jointly informed by structural and functional network connectivity

There are a growing number of neuroimaging studies motivating joint structural and functional brain connectivity. Brain connectivity of different modalities provides insight into brain functional organization by leveraging complementary information, especially for brain disorders such as schizophrenia. In this paper, we propose a multi-modal independent component analysis (ICA) model that utilizes information from both structural and functional brain connectivity guided by spatial maps to estimate intrinsic connectivity networks (ICNs). Structural connectivity is estimated through whole-brain tractography on diffusion-weighted MRI (dMRI), while functional connectivity is derived from resting-state functional MRI (rs-fMRI). The proposed structural-functional connectivity and spatially constrained ICA (sfCICA) model estimates ICNs at the subject level using a multi-objective optimization framework. We evaluated our model using synthetic and real datasets (including dMRI and rs-fMRI from 149 schizophrenia patients and 162 controls). Multi-modal ICNs revealed enhanced functional coupling between ICNs with higher structural connectivity, improved modularity, and network distinction, particularly in schizophrenia. Statistical analysis of group differences showed more significant differences in the proposed model compared to the unimodal model. In summary, the sfCICA model showed benefits from being jointly informed by structural and functional connectivity. These findings suggest advantages in simultaneously learning effectively and enhancing connectivity estimates using structural connectivity.

Increased Segregation in Functional Connectivity Networks When Watching Unpleasant Arousing Videos: A Generalized Psychophysiological Interaction Analysis

Background: Properties of functional connectivity (FC), such as network integration and segregation, are shown to be associated with various human behaviors. For example, Godwin et al. and Sun et al. found increased integration with attention allocation, whereas Cohen and D'Esposito and Shine et al. observed increased segregation with simple motor tasks. The current study investigated how viewing video clips with different valence and arousal influenced integration-segregation properties in task-based FC networks. Methods: We analyzed an open dataset collected by Kim et al. We performed a generalized psychophysiological interaction (gPPI) analysis paired with network analysis and community detection to investigate changes in brain network dynamics when people watched four types of videos that differed by affective valence (unpleasant or pleasant) and arousal (arousing or calm). Results: Results showed that unpleasant arousing videos produced greater FC deviation from the baseline (task-induced FC deviation [tiFCd]) and perturbed the brain into a more segregated state than other kinds of video. Increased segregation was only observed in association systems, not sensorimotor systems. Discussion: Unpleasant arousing content perturbed the brain to a functionally distinct state from the other three types of affective videos. We suggest that the change in brain state was related to people disengaging from the unpleasant arousing content or, alternatively, staying alert while exposed to unpleasant arousing stimuli. The study also added to our understanding of how combining task-based gPPI analysis with community detection methods and network segregation measures can advance our knowledge of the links between behavior and brain state changes. Impact statement Network integration and segregation is an important property of the human brain. We address the question of how affective stimuli influence brain dynamics from a functional connectivity (FC) network integration-segregation perspective. By conducting a whole-brain generalized psychophysiological interaction (gPPI) analysis paired with community detection methods, we found that highly aversive video content induced significant FC changes and perturbed the brain to a more segregated state.

Open datasets and code for multi-scale relations on structure, function and neuro-genetics in the human brain

The human brain is an extremely complex network of structural and functional connections that operate at multiple spatial and temporal scales. Investigating the relationship between these multi-scale connections is critical to advancing our comprehension of brain function and disorders. However, accurately predicting structural connectivity from its functional counterpart remains a challenging pursuit. One of the major impediments is the lack of public repositories that integrate structural and functional networks at diverse resolutions, in conjunction with modular transcriptomic profiles, which are essential for comprehensive biological interpretation. To mitigate this limitation, our contribution encompasses the provision of an open-access dataset consisting of derivative matrices of functional and structural connectivity across multiple scales, accompanied by code that facilitates the investigation of their interrelations. We also provide additional resources focused on neuro-genetic associations of module-level network metrics, which present promising opportunities to further advance research in the field of network neuroscience, particularly concerning brain disorders.

Relation of connectome topology to brain volume across 103 mammalian species

The brain connectome is an embedded network of anatomically interconnected brain regions, and the study of its topological organization in mammals has become of paramount importance due to its role in scaffolding brain function and behavior. Unlike many other observable networks, brain connections incur material and energetic cost, and their length and density are volumetrically constrained by the skull. Thus, an open question is how differences in brain volume impact connectome topology. We address this issue using the MaMI database, a diverse set of mammalian connectomes reconstructed from 201 animals, covering 103 species and 12 taxonomy orders, whose brain size varies over more than 4 orders of magnitude. Our analyses focus on relationships between volume and modular organization. After having identified modules through a multiresolution approach, we observed how connectivity features relate to the modular structure and how these relations vary across brain volume. We found that as the brain volume increases, modules become more spatially compact and dense, comprising more costly connections. Furthermore, we investigated how spatial embedding shapes network communication, finding that as brain volume increases, nodes' distance progressively impacts communication efficiency. We identified modes of variation in network communication policies, as smaller and bigger brains show higher efficiency in routing- and diffusion-based signaling, respectively. Finally, bridging network modularity and communication, we found that in larger brains, modular structure imposes stronger constraints on network signaling. Altogether, our results show that brain volume is systematically related to mammalian connectome topology and that spatial embedding imposes tighter restrictions on larger brains.