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For: Cartailler J, Kwon T, Yuste R, Holcman D. Deconvolution of Voltage Sensor Time Series and Electro-diffusion Modeling Reveal the Role of Spine Geometry in Controlling Synaptic Strength. Neuron 2018;97:1126-1136.e10. [PMID: 29429935 DOI: 10.1016/j.neuron.2018.01.034] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2017] [Revised: 10/09/2017] [Accepted: 01/12/2018] [Indexed: 01/03/2023]
Number Cited by Other Article(s)
1
Paquin-Lefebvre F, Holcman D. Voltage mapping in subcellular nanodomains using electro-diffusion modeling. J Chem Phys 2024;161:034108. [PMID: 39007374 DOI: 10.1063/5.0215900] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2024] [Accepted: 06/25/2024] [Indexed: 07/16/2024]  Open
2
Lee CT, Bell M, Bonilla-Quintana M, Rangamani P. Biophysical Modeling of Synaptic Plasticity. Annu Rev Biophys 2024;53:397-426. [PMID: 38382115 DOI: 10.1146/annurev-biophys-072123-124954] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/23/2024]
3
Gest AM, Grenier V, Miller EW. Optical Estimation of Membrane Potential Values Using Fluorescence Lifetime Imaging Microscopy and Hybrid Chemical-Genetic Voltage Indicators. Bioelectricity 2024;6:34-41. [PMID: 38516638 PMCID: PMC10951690 DOI: 10.1089/bioe.2023.0027] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/23/2024]  Open
4
Jędrzejewska-Szmek J, Dorman DB, Blackwell KT. Making time and space for calcium control of neuron activity. Curr Opin Neurobiol 2023;83:102804. [PMID: 37913687 PMCID: PMC10842147 DOI: 10.1016/j.conb.2023.102804] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2023] [Revised: 10/02/2023] [Accepted: 10/03/2023] [Indexed: 11/03/2023]
5
Zecevic D. Electrical properties of dendritic spines. Biophys J 2023;122:4303-4315. [PMID: 37837192 PMCID: PMC10698282 DOI: 10.1016/j.bpj.2023.10.008] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2023] [Revised: 09/27/2023] [Accepted: 10/11/2023] [Indexed: 10/15/2023]  Open
6
Pinotsis DA, Fridman G, Miller EK. Cytoelectric Coupling: Electric fields sculpt neural activity and "tune" the brain's infrastructure. Prog Neurobiol 2023;226:102465. [PMID: 37210066 DOI: 10.1016/j.pneurobio.2023.102465] [Citation(s) in RCA: 12] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2023] [Revised: 05/09/2023] [Accepted: 05/17/2023] [Indexed: 05/22/2023]
7
Tran PD, Blanpied TA, Atzberger PJ. Protein drift-diffusion dynamics and phase separation in curved cell membranes and dendritic spines: Hybrid discrete-continuum methods. Phys Rev E 2022;106:044402. [PMID: 36397472 DOI: 10.1103/physreve.106.044402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Accepted: 09/20/2022] [Indexed: 06/16/2023]
8
Priel A, Dai XQ, Chen XZ, Scarinci N, Cantero MDR, Cantiello HF. Electrical recordings from dendritic spines of adult mouse hippocampus and effect of the actin cytoskeleton. Front Mol Neurosci 2022;15:769725. [PMID: 36090255 PMCID: PMC9453158 DOI: 10.3389/fnmol.2022.769725] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Accepted: 07/26/2022] [Indexed: 11/28/2022]  Open
9
Post-Synapses in the Brain: Role of Dendritic and Spine Structures. Biomedicines 2022;10:biomedicines10081859. [PMID: 36009405 PMCID: PMC9405724 DOI: 10.3390/biomedicines10081859] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Revised: 06/26/2022] [Accepted: 07/22/2022] [Indexed: 02/07/2023]  Open
10
Rosado J, Bui VD, Haas CA, Beck J, Queisser G, Vlachos A. Calcium modeling of spine apparatus-containing human dendritic spines demonstrates an “all-or-nothing” communication switch between the spine head and dendrite. PLoS Comput Biol 2022;18:e1010069. [PMID: 35468131 PMCID: PMC9071165 DOI: 10.1371/journal.pcbi.1010069] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Revised: 05/05/2022] [Accepted: 03/30/2022] [Indexed: 11/19/2022]  Open
11
Computing Extracellular Electric Potentials from Neuronal Simulations. ADVANCES IN EXPERIMENTAL MEDICINE AND BIOLOGY 2022;1359:179-199. [DOI: 10.1007/978-3-030-89439-9_8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
12
Rusakov DA, Stewart MG. Synaptic environment and extrasynaptic glutamate signals: The quest continues. Neuropharmacology 2021;195:108688. [PMID: 34174263 DOI: 10.1016/j.neuropharm.2021.108688] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Revised: 06/17/2021] [Accepted: 06/21/2021] [Indexed: 12/11/2022]
13
Steffens H, Mott AC, Li S, Wegner W, Švehla P, Kan VWY, Wolf F, Liebscher S, Willig KI. Stable but not rigid: Chronic in vivo STED nanoscopy reveals extensive remodeling of spines, indicating multiple drivers of plasticity. SCIENCE ADVANCES 2021;7:7/24/eabf2806. [PMID: 34108204 PMCID: PMC8189587 DOI: 10.1126/sciadv.abf2806] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2020] [Accepted: 04/22/2021] [Indexed: 06/01/2023]
14
Tricot A, Sokolov IM, Holcman D. Modeling the voltage distribution in a non-locally but globally electroneutral confined electrolyte medium: applications for nanophysiology. J Math Biol 2021;82:65. [PMID: 34057627 DOI: 10.1007/s00285-021-01618-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Revised: 03/14/2021] [Accepted: 05/17/2021] [Indexed: 11/25/2022]
15
Electrodiffusion Phenomena in Neuroscience and the Nernst–Planck–Poisson Equations. ELECTROCHEM 2021. [DOI: 10.3390/electrochem2020014] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/02/2023]  Open
16
Obashi K, Taraska JW, Okabe S. The role of molecular diffusion within dendritic spines in synaptic function. J Gen Physiol 2021;153:e202012814. [PMID: 33720306 PMCID: PMC7967910 DOI: 10.1085/jgp.202012814] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2020] [Accepted: 02/16/2021] [Indexed: 12/21/2022]  Open
17
Tamada H, Blanc J, Korogod N, Petersen CC, Knott GW. Ultrastructural comparison of dendritic spine morphology preserved with cryo and chemical fixation. eLife 2020;9:56384. [PMID: 33274717 PMCID: PMC7748412 DOI: 10.7554/elife.56384] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2020] [Accepted: 12/04/2020] [Indexed: 12/25/2022]  Open
18
Cartailler J, Holcman D. Electrodiffusion Theory to Map the Voltage Distribution in Dendritic Spines at a Nanometer Scale. Neuron 2020;104:440-441. [PMID: 31697920 DOI: 10.1016/j.neuron.2019.10.025] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2019] [Revised: 08/23/2019] [Accepted: 10/12/2019] [Indexed: 11/28/2022]
19
Holcman D, Yuste R. Reply to 'Only negligible deviations from electroneutrality are expected in dendritic spines'. Nat Rev Neurosci 2019;21:54-55. [PMID: 31700152 DOI: 10.1038/s41583-019-0239-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
20
No Extraction of Spine Neck Resistance from Underdetermined Equations. Neuron 2019;104:438-439. [DOI: 10.1016/j.neuron.2019.10.024] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Revised: 09/27/2019] [Accepted: 10/12/2019] [Indexed: 11/20/2022]
21
Electrodiffusion models of synaptic potentials in dendritic spines. J Comput Neurosci 2019;47:77-89. [PMID: 31410632 DOI: 10.1007/s10827-019-00725-5] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2019] [Revised: 07/29/2019] [Accepted: 08/01/2019] [Indexed: 12/17/2022]
22
Glasgow SD, McPhedrain R, Madranges JF, Kennedy TE, Ruthazer ES. Approaches and Limitations in the Investigation of Synaptic Transmission and Plasticity. Front Synaptic Neurosci 2019;11:20. [PMID: 31396073 PMCID: PMC6667546 DOI: 10.3389/fnsyn.2019.00020] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/30/2019] [Accepted: 07/04/2019] [Indexed: 12/16/2022]  Open
23
Basnayake K, Mazaud D, Bemelmans A, Rouach N, Korkotian E, Holcman D. Fast calcium transients in dendritic spines driven by extreme statistics. PLoS Biol 2019;17:e2006202. [PMID: 31163024 PMCID: PMC6548358 DOI: 10.1371/journal.pbio.2006202] [Citation(s) in RCA: 23] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2018] [Accepted: 04/08/2019] [Indexed: 12/21/2022]  Open
24
Cartailler J, Holcman D. Electrical transient laws in neuronal microdomains based on electro-diffusion. Phys Chem Chem Phys 2019;20:21062-21067. [PMID: 30074044 DOI: 10.1039/c8cp02593b] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
25
Cartailler J, Holcman D. Steady-state voltage distribution in three-dimensional cusp-shaped funnels modeled by PNP. J Math Biol 2019;79:155-185. [DOI: 10.1007/s00285-019-01353-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Indexed: 11/24/2022]
26
Yang Y, Lu J, Zuo Y. Changes of Synaptic Structures Associated with Learning, Memory and Diseases. BRAIN SCIENCE ADVANCES 2019. [DOI: 10.26599/bsa.2018.2018.9050012] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]  Open
27
Stringer C, Pachitariu M. Computational processing of neural recordings from calcium imaging data. Curr Opin Neurobiol 2019;55:22-31. [DOI: 10.1016/j.conb.2018.11.005] [Citation(s) in RCA: 48] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2018] [Revised: 08/29/2018] [Accepted: 11/19/2018] [Indexed: 12/28/2022]
28
Okamura Y, Kawanabe A, Kawai T. Voltage-Sensing Phosphatases: Biophysics, Physiology, and Molecular Engineering. Physiol Rev 2019;98:2097-2131. [PMID: 30067160 DOI: 10.1152/physrev.00056.2017] [Citation(s) in RCA: 29] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]  Open
29
OKAMURA Y, OKOCHI Y. Molecular mechanisms of coupling to voltage sensors in voltage-evoked cellular signals. PROCEEDINGS OF THE JAPAN ACADEMY. SERIES B, PHYSICAL AND BIOLOGICAL SCIENCES 2019;95:111-135. [PMID: 30853698 PMCID: PMC6541726 DOI: 10.2183/pjab.95.010] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/24/2018] [Accepted: 01/07/2019] [Indexed: 06/09/2023]
30
Breit M, Kessler M, Stepniewski M, Vlachos A, Queisser G. Spine-to-Dendrite Calcium Modeling Discloses Relevance for Precise Positioning of Ryanodine Receptor-Containing Spine Endoplasmic Reticulum. Sci Rep 2018;8:15624. [PMID: 30353066 PMCID: PMC6199256 DOI: 10.1038/s41598-018-33343-9] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Accepted: 09/18/2018] [Indexed: 12/15/2022]  Open
31
Guerrier C, Holcman D. The First 100 nm Inside the Pre-synaptic Terminal Where Calcium Diffusion Triggers Vesicular Release. Front Synaptic Neurosci 2018;10:23. [PMID: 30083101 PMCID: PMC6064743 DOI: 10.3389/fnsyn.2018.00023] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2018] [Accepted: 06/29/2018] [Indexed: 12/04/2022]  Open
32
Eyal G, Verhoog MB, Testa-Silva G, Deitcher Y, Benavides-Piccione R, DeFelipe J, de Kock CPJ, Mansvelder HD, Segev I. Human Cortical Pyramidal Neurons: From Spines to Spikes via Models. Front Cell Neurosci 2018;12:181. [PMID: 30008663 PMCID: PMC6034553 DOI: 10.3389/fncel.2018.00181] [Citation(s) in RCA: 64] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2018] [Accepted: 06/08/2018] [Indexed: 12/19/2022]  Open
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