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Casciaro B, Loffredo MR, Cappiello F, O’Sullivan N, Tortora C, Manzer R, Karmakar S, Haskell A, Hasan SK, Mangoni ML. KDEON WK-11: A short antipseudomonal peptide with promising potential. Front Chem 2022; 10:1000765. [PMID: 36465859 PMCID: PMC9713011 DOI: 10.3389/fchem.2022.1000765] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 11/01/2022] [Indexed: 08/27/2023] Open
Abstract
The plight of antimicrobial resistance continues to limit the availability of antibiotic treatment effective in combating resistant bacterial infections. Despite efforts made to rectify this issue and minimise its effects on both patients and the wider community, progress in this area remains minimal. Here, we de-novo designed a peptide named KDEON WK-11, building on previous work establishing effective residues and structures active in distinguished antimicrobial peptides such as lactoferrin. We assessed its antimicrobial activity against an array of bacterial strains and identified its most potent effect, against Pseudomonas aeruginosa with an MIC value of 3.12 μM, lower than its counterparts developed with similar residues and chain lengths. We then determined its anti-biofilm properties, potential mechanism of action and in vitro cytotoxicity. We identified that KDEON WK-11 had a broad range of antimicrobial activity and specific capabilities to fight Pseudomonas aeruginosa with low in vitro cytotoxicity and promising potential to express anti-lipopolysaccharide qualities, which could be exploited to expand its properties into an anti-sepsis agent.
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Affiliation(s)
- Bruno Casciaro
- Laboratory Affiliated to Pasteur Italia-Fondazione Cenci Bolognetti, Department of Biochemical Sciences A. Rossi Fanelli, Sapienza University of Rome, Rome, Italy
| | - Maria Rosa Loffredo
- Laboratory Affiliated to Pasteur Italia-Fondazione Cenci Bolognetti, Department of Biochemical Sciences A. Rossi Fanelli, Sapienza University of Rome, Rome, Italy
| | - Floriana Cappiello
- Laboratory Affiliated to Pasteur Italia-Fondazione Cenci Bolognetti, Department of Biochemical Sciences A. Rossi Fanelli, Sapienza University of Rome, Rome, Italy
| | - Niamh O’Sullivan
- Laboratory Affiliated to Pasteur Italia-Fondazione Cenci Bolognetti, Department of Biochemical Sciences A. Rossi Fanelli, Sapienza University of Rome, Rome, Italy
| | - Carola Tortora
- Department of Chemistry and Technology of Drugs, “Department of Excellence 2018–2022”, Sapienza University of Rome, Rome, Italy
| | - Rizwan Manzer
- Iuventis Technologies Inc. (DBA Immunotrex Biologics), Lowell, MA, United States
| | - Sougata Karmakar
- Iuventis Technologies Inc. (DBA Immunotrex Biologics), Lowell, MA, United States
| | - Alan Haskell
- Iuventis Technologies Inc. (DBA Immunotrex Biologics), Lowell, MA, United States
| | - Syed K. Hasan
- Iuventis Technologies Inc. (DBA Immunotrex Biologics), Lowell, MA, United States
| | - Maria Luisa Mangoni
- Laboratory Affiliated to Pasteur Italia-Fondazione Cenci Bolognetti, Department of Biochemical Sciences A. Rossi Fanelli, Sapienza University of Rome, Rome, Italy
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2
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Dinesh Kumar S, Park JH, Kim HS, Seo CD, Ajish C, Kim EY, Lim HS, Shin SY. Cationic, amphipathic small molecules based on a triazine-piperazine-triazine scaffold as a new class of antimicrobial agents. Eur J Med Chem 2022; 243:114747. [PMID: 36103802 DOI: 10.1016/j.ejmech.2022.114747] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/02/2022] [Revised: 08/23/2022] [Accepted: 09/03/2022] [Indexed: 11/04/2022]
Abstract
Poor proteolytic resistance, toxicity and salt/serum sensitivity of antimicrobial peptides (AMPs) limits their practical clinical application. Here, to overcome these drawbacks of AMPs and develop novel antimicrobial agents, a series of small molecules based on a triazine-piperazine-triazine scaffold that mimic the cationic amphipathic structure of AMPs were synthesized and evaluated their potential as a new class of antimicrobial agents. All designed compounds showed strong antimicrobial activity and negligible hemolytic activity. Particularly, five compounds (9, 11, 12, 15, and 16) presented excellent cell selectivity with proteolytic resistance, salt/serum stability and anti-inflammatory activity against lipopolysaccharide (LPS)-induced inflammation. These five compounds exhibited similar or 2-4 fold higher antimicrobial activity than melittin against six antibiotic-resistant bacteria tested. Similar to the intracellular-targeting AMP, buforin-2, these compounds displayed an intracellular mode of antimicrobial action. These compounds showed potent biofilm inhibitory and eradicating activities against multidrug-resistant Pseudomonas aeruginosa (MDRPA). Additionally, these compounds displayed synergistic or additive effects when combined with selected clinically used antibiotics. Furthermore, these compounds have been proven to inhibit pro-inflammatory cytokine release by directly binding to LPS and blocking the interaction between LPS and CD14/TLR4 receptor in LPS-stimulated RAW264.7 macrophage cells. Overall, our results demonstrate the potential of the designed compounds as a novel class of multifunctional antimicrobial agents to combat bacterial infection.
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Affiliation(s)
- S Dinesh Kumar
- Department of Cellular & Molecular Medicine, School of Medicine, Chosun University, Gwangju, 61452, Republic of Korea
| | - Jun Hyung Park
- Department of Chemistry and Division of Advanced Materials Science, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea
| | - Hyun Soo Kim
- Department of Chemistry and Division of Advanced Materials Science, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea
| | - Chang Deok Seo
- Department of Chemistry and Division of Advanced Materials Science, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea
| | - Chelladurai Ajish
- Department of Cellular & Molecular Medicine, School of Medicine, Chosun University, Gwangju, 61452, Republic of Korea
| | - Eun Young Kim
- Department of Cellular & Molecular Medicine, School of Medicine, Chosun University, Gwangju, 61452, Republic of Korea
| | - Hyun-Suk Lim
- Department of Chemistry and Division of Advanced Materials Science, Pohang University of Science and Technology (POSTECH), Pohang, 37673, Republic of Korea.
| | - Song Yub Shin
- Department of Cellular & Molecular Medicine, School of Medicine, Chosun University, Gwangju, 61452, Republic of Korea.
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3
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Abstract
Most cells within the human body interact with neighboring cells and extracellular matrix (ECM) components to establish a unique 3D organization. These cell–cell and cell–ECM interactions form a complex communication network of biochemical and mechanical signals critical for normal cell physiology. The behavior of cells in a 3D environment is fundamentally different from that of cells in monolayer culture. Aggregation can affect cell–cell interactions, being more representative of the normal tissue microenvironment. Therefore, 3D cell culture technologies have been developed. The general method for cell aggregate is a physical method; it is difficult to control the size and number of cell aggregates. In any case, no chemical method has been discovered yet, so a new method to solve these problems is needed. In this paper, we describe the induction of a cell aggregate of the newly discovered (Lys-Pro)12(KP24) peptide. Since it was revealed that KP24 had cell aggregate-inducing activity, its derivatives were molecularly designed to clarify the importance of the KP24 sequence. We report that cell aggregations were induced by KP24 to form aggregates of fibroblast cells. We evaluated KP24 derivative periodic peptides such as (Lys-Pro-Pro)8(KPP24) and (Lys-Lys-Pro)8(KKP24). The relationship between the structure of the peptide chain and the activity induced by the cell aggregations was investigated from the viewpoint of basic research and the biomedical engineering field.
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4
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Tryptic Stability and Antimicrobial Activity of the Derivatives of Polybia-CP with Fine-Tuning Modification in the Side Chain of Lysine. Int J Pept Res Ther 2020. [DOI: 10.1007/s10989-020-10129-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/22/2022]
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5
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Kumar SD, Shin SY. Antimicrobial and anti-inflammatory activities of short dodecapeptides derived from duck cathelicidin: Plausible mechanism of bactericidal action and endotoxin neutralization. Eur J Med Chem 2020; 204:112580. [DOI: 10.1016/j.ejmech.2020.112580] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2020] [Revised: 05/27/2020] [Accepted: 06/11/2020] [Indexed: 01/04/2023]
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6
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Rajasekaran G, Kumar SD, Yang S, Shin SY. Improving Cell Selectivity of Fowlicidin‐1 by Swapping Residues between Pro‐7 and Tyr‐20. B KOREAN CHEM SOC 2019. [DOI: 10.1002/bkcs.11738] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Affiliation(s)
- Ganesan Rajasekaran
- Department of Medical Science, Graduate School, School of MedicineChosun University Gwangju 61452 Republic of Korea
| | - S. Dinesh Kumar
- Department of Medical Science, Graduate School, School of MedicineChosun University Gwangju 61452 Republic of Korea
| | - Sungtae Yang
- Department of Medical Science, Graduate School, School of MedicineChosun University Gwangju 61452 Republic of Korea
- Department of Microbiology, School of MedicineChosun University Gwangju 61452 Republic of Korea
| | - Song Yub Shin
- Department of Medical Science, Graduate School, School of MedicineChosun University Gwangju 61452 Republic of Korea
- Department of Cellular and Molecular Medicine, School of MedicineChosun University Gwangju 61452 Republic of Korea
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7
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Shao C, Tian H, Wang T, Wang Z, Chou S, Shan A, Cheng B. Central β-turn increases the cell selectivity of imperfectly amphipathic α-helical peptides. Acta Biomater 2018; 69:243-255. [PMID: 29355714 DOI: 10.1016/j.actbio.2018.01.009] [Citation(s) in RCA: 54] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2017] [Revised: 01/09/2018] [Accepted: 01/09/2018] [Indexed: 12/19/2022]
Abstract
Although membrane lytic antimicrobial peptides (AMPs) show enormous potential for addressing mounting global antibiotic resistance, therapeutic applications are hindered by their weak antimicrobial activity, high toxicity, salt sensitivity and poor understanding of structure-activity relationships. To investigate the effects of different parameters on the biological activities of AMPs, a rational approach was adopted to design a series of short cationic α-helical peptides comprising the Ac-WxKyWxzzyKxWyK-NH2 sequence, where x: cationic residues (Arg or Lys), y: hydrophobic residues (Ala, Val, Ile or Leu), and zz: β-turn (rigid D-Pro-Gly turn or flexible Gly-Gly turn). The peptides showed a more helical structure as the concentration of membrane-mimetic solution increased. The peptide RL with a central D-Pro-Gly turn (x: Arg, y: Lys, zz = D-Pro-Gly) exhibited broad-spectrum antimicrobial activities (2-8 μM) against ten types of clinically relevant microorganisms and even maintained its activity in the presence of physiological salts and showed excellent selectivity toward bacterial cells over human red blood cells and mammalian cells. However, the toxicity was increased after the removal of D-Pro-Gly turn. Additionally, the bactericidal activity was reduced when the D-Pro-Gly turn was replaced by a Gly-Gly turn. Fluorescence spectroscopy and electron microscopy analyses indicated that RL and its derivatives killed microbial cells by permeabilizing the cell membrane and damaging membrane integrity. In conclusion, these findings clearly generalized a potential method for designing or optimizing AMPs, and the peptide RL is a promising therapeutic candidate to combat antibiotic resistance. STATEMENT OF SIGNIFICANCE We proposed a rational approach to design imperfectly amphiphilic peptides and identified RL (Ac-WRKLWRpGLKRWLK-NH2) in particular that shows strong antibacterial properties, low toxicity and high salt resistance. The β-turn unit inserted into the central position of cationic α-helical peptides, especially the D-Pro-Gly turn, significantly increase the cell selectivity of the synthetic amphiphiles. The findings demonstrate a potential method for designing and/or optimizing AMPs, which would facilitate the development of strategies to design peptide-based antimicrobial biomaterials in a variety of biotechnological and clinical applications.
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8
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Rajasekaran G, Shin SY. Fowlicidin-3 Analog with Improved Cell Selectivity Synthesized by Shifting a PXXP Motif from the N-Terminus to a Central Position. B KOREAN CHEM SOC 2018. [DOI: 10.1002/bkcs.11381] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Ganesan Rajasekaran
- Department of Cellular & Molecular Medicine; School of Medicine, Chosun University; Gwangju 501-759 Republic of Korea
| | - Song Yub Shin
- Department of Cellular & Molecular Medicine; School of Medicine, Chosun University; Gwangju 501-759 Republic of Korea
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9
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Kim MK, Kang HK, Ko SJ, Hong MJ, Bang JK, Seo CH, Park Y. Mechanisms driving the antibacterial and antibiofilm properties of Hp1404 and its analogue peptides against multidrug-resistant Pseudomonas aeruginosa. Sci Rep 2018; 8:1763. [PMID: 29379033 PMCID: PMC5789083 DOI: 10.1038/s41598-018-19434-7] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Accepted: 12/28/2017] [Indexed: 01/06/2023] Open
Abstract
Hp1404, identified from the venom of the scorpion Heterometrus petersii, displays antimicrobial activity with cytotoxicity. Several synthetic peptides were designed based on the parent peptide Hp1404 to reduce cytotoxicity and improve activity (deletion of glycine and phenylalanine, substitution with leucine and lysine). The analogue peptides generated comprised 12 amino acids and displayed amphipathic α-helical structures, with higher hydrophobic moments and net positive charge than those of the Hp1404. The analogues showed less hemolytic and toxic effects toward mammalian cells than the Hp1404, especially Hp1404-T1e, which exhibited particularly potent antibacterial and antibiofilm activities against multidrug-resistant Pseudomonas aeruginosa (MRPA) strains. The analogue peptide Hp1404-T1e was more stable against salt and trypsin than the Hp1404. Hp1404's mechanism of action involves binding to lipopolysaccharide (LPS), thereby killing bacteria through membrane disruption. Hp1404-T1e kills bacteria more rapidly than Hp1404 and not only seems to bind more strongly to LPS but may also be able to enter bacterial cells and interact with their DNA. Additionally, Hp1404-T1e can effectively kill bacteria in vivo. The results of this study indicate that Hp1404-T1e not only displays antimicrobial activity, but is also functional in physiological conditions, confirming its potential use as an effective therapeutic agent against MRPA.
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Affiliation(s)
- Min Kyung Kim
- Research Center for proteineous Materials (RCPM), Chosun University, Kwangju, Republic of Korea
- Department of Biotechnology and BK21-Plus Research Team for Bioactive Control Technology, Chosun University, Kwangju, Republic of Korea
| | - Hee Kyoung Kang
- Department of Biotechnology and BK21-Plus Research Team for Bioactive Control Technology, Chosun University, Kwangju, Republic of Korea
| | - Su Jin Ko
- Research Center for proteineous Materials (RCPM), Chosun University, Kwangju, Republic of Korea
- Department of Biotechnology and BK21-Plus Research Team for Bioactive Control Technology, Chosun University, Kwangju, Republic of Korea
| | - Min Ji Hong
- Research Center for proteineous Materials (RCPM), Chosun University, Kwangju, Republic of Korea
- Department of Biotechnology and BK21-Plus Research Team for Bioactive Control Technology, Chosun University, Kwangju, Republic of Korea
| | - Jeong Kyu Bang
- Division of Magnetic Resonance, Korea Basic Science Institute, Ochang, Chung-Buk, 363-883, Republic of Korea
| | - Chang Ho Seo
- Department of Bioinformatics, Kongju National University, Kongju, 314-701, South Korea
| | - Yoonkyung Park
- Research Center for proteineous Materials (RCPM), Chosun University, Kwangju, Republic of Korea.
- Department of Biotechnology and BK21-Plus Research Team for Bioactive Control Technology, Chosun University, Kwangju, Republic of Korea.
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10
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Wei Y, Ma L, Zhang L, Xu X. Noncovalent interaction-assisted drug delivery system with highly efficient uptake and release of paclitaxel for anticancer therapy. Int J Nanomedicine 2017; 12:7039-7051. [PMID: 29026300 PMCID: PMC5626417 DOI: 10.2147/ijn.s144322] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
An effective drug delivery system requires efficient drug uptake and release inside cancer cells. Here, we report a novel drug delivery system, in which paclitaxel (PTX) interacts with a novel cell penetrating peptide (CPP) through noncovalent interaction designed based on molecular simulations. This CPP/PTX complex confers high efficiency in delivering PTX into cancer cells not by endocytosis but by an energy-independent pathway. Once inside cells, the noncovalent interaction between PTX and the CPP may allow fast release of PTX within cells due to the direct translocation of CPP/PTX. This drug delivery system exhibits strong capacity for inhibition of tumor growth and offers a new avenue for the development of advanced drug delivery systems for anticancer therapy.
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Affiliation(s)
- Yuping Wei
- State Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing
| | - Liang Ma
- School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, Anhui, People's Republic of China
| | - Liang Zhang
- State Key Laboratory of Biochemical Engineering, Institute of Process Engineering, Chinese Academy of Sciences, Beijing.,School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, Anhui, People's Republic of China
| | - Xia Xu
- School of Chemistry and Chemical Engineering, Anhui University of Technology, Maanshan, Anhui, People's Republic of China
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11
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Jacob B, Rajasekaran G, Kim EY, Park IS, Bang JK, Shin SY. The stereochemical effect of SMAP-29 and SMAP-18 on bacterial selectivity, membrane interaction and anti-inflammatory activity. Amino Acids 2016; 48:1241-51. [PMID: 26795535 DOI: 10.1007/s00726-016-2170-y] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2015] [Accepted: 01/05/2016] [Indexed: 12/01/2022]
Abstract
Sheep myeloid antimicrobial peptide-29 (SMAP-29) is a cathelicidin-related antimicrobial peptide derived from sheep myeloid cells. In order to investigate the effects of L-to-D-amino acid substitution in SMAP-29 on bacterial selectivity, membrane interaction and anti-inflammatory activity, we synthesized its two D-enantiomeric peptides (SMAP-29-E1 and SMAP-29-E2 containing D-Ile and D-allo-Ile, respectively) and two diastereomeric peptides (SMAP-29-D1 and SMAP-29-D2). Additionally, in order to address the effect of L-to-D-amino acid substitution in the N-terminal helical peptide of SMAP-29 (named SMAP-18) on antimicrobial activity, we synthesized its two D-enantiomeric peptides (SMAP-18-E1 and SMAP-18-E2), which are composed of D-amino acids entirely. L-to-D-amino acid substitution in membrane-targeting AMP, SMAP-29 did not affect its antimicrobial activity. However, D-allo-Ile containing-SMAP-29-E2 and SMAP-29-D2 exhibited less hemolytic activity compared to D-Ile containing-SMAP-29-E1 and SMAP-29-D1, respectively. L-to-D-amino acid substitution in intracellular targeting-AMPs, SMAP-18 and buforin-2 improved antimicrobial activity by 2- to eightfold. The improved antimicrobial activity of the D-isomers of SMAP-18 and buforin-2 seems to be due to the stability against proteases inside bacterial cells. Membrane depolarization and dye leakage suggested that the membrane-disruptive mode of SMAP-29-D1 and SMAP-29-D2 is different from that of SMAP-29, SMAP-29-E1, and SMAP-29-E2. L-to-D-amino acid substitution in SMAP-29 improved anti-inflammatory activity in LPS-stimulated RAW 264.7 cells. In summary, we propose here that D-allo-Ile substitution is a more powerful strategy for increasing bacterial selectivity than D-Ile substitution in the design of D-enantiomeric and diastereomeric AMPs. SMAP-29-D1, and SMAP-29-D2 with improved bacterial selectivity and anti-inflammatory activity can serve as promising candidates for the development of anti-inflammatory and antimicrobial agents.
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Affiliation(s)
- Binu Jacob
- Department of Medical Science, Graduate School, Chosun University, Gwangju, 501-759, Republic of Korea
| | - Ganesan Rajasekaran
- Department of Medical Science, Graduate School, Chosun University, Gwangju, 501-759, Republic of Korea
| | - Eun Young Kim
- Department of Medical Science, Graduate School, Chosun University, Gwangju, 501-759, Republic of Korea
| | - Il-Seon Park
- Department of Medical Science, Graduate School, Chosun University, Gwangju, 501-759, Republic of Korea.,Department of Cellular and Molecular Medicine, School of Medicine, Chosun University, Gwangju, 501-759, Republic of Korea
| | - Jeong-Kyu Bang
- Division of Magnetic Resonance, Korea Basic Science Institute, 804-1 Yangchung-ri, Ochang, Chungbuk, 363-883, Republic of Korea.
| | - Song Yub Shin
- Department of Medical Science, Graduate School, Chosun University, Gwangju, 501-759, Republic of Korea. .,Department of Cellular and Molecular Medicine, School of Medicine, Chosun University, Gwangju, 501-759, Republic of Korea.
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12
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Zare-Zardini H, Taheri-Kafrani A, Ordooei M, Ebrahimi L, Tolueinia B, Soleimanizadeh M. Identification and biochemical characterization of a new antibacterial and antifungal peptide derived from the insect Sphodromantis viridis. BIOCHEMISTRY (MOSCOW) 2016; 80:433-40. [PMID: 25869360 DOI: 10.1134/s0006297915040069] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Antimicrobial peptides are members of the immune system that protect the host from infection. In this study, a potent and structurally novel antimicrobial peptide was isolated and characterized from praying mantis Sphodromantis viridis. This 14-amino acid peptide was purified by RP-HPLC. Tandem mass spectrometry was used for sequencing this peptide, and the results showed that the peptide belongs to the Mastoparan family. The peptide was named Mastoparan-S. Mastoparan-S demonstrated that it has antimicrobial activities against a broad spectrum of microorganisms (Gram-positive and Gram-negative bacteria and fungi), and it was found to be more potent than common antibiotics such as kanamycin. Mastoparan-S showed higher antimicrobial activity against Gram-negative bacteria compared to Gram-positive ones and fungi. The minimum inhibitory concentration (MIC) values of Mastoparan-S are 15.1-28.3 µg/ml for bacterial and 19.3-24.6 µg/ml for fungal pathogens. In addition, this newly described peptide showed low hemolytic activity against human red blood cells. The in vitro cytotoxicity of Mastoparan-S was also evaluated on monolayer of normal human cells (HeLa) by MTT assay, and the results illustrated that Mastoparan-S had significant cytotoxicity at concentrations higher than 40 µg/ml and had no any cytotoxicity at the MIC (≤30 µg/ml). The findings of the present study reveal that this newly described peptide can be introduced as an appropriate candidate for treatment of topical infection.
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Affiliation(s)
- Hadi Zare-Zardini
- Young Researchers and Elite Club, Yazd Branch, Islamic Azad University, Yazd, Iran
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13
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Design and membrane-disruption mechanism of charge-enriched AMPs exhibiting cell selectivity, high-salt resistance, and anti-biofilm properties. Amino Acids 2015; 48:505-22. [DOI: 10.1007/s00726-015-2104-0] [Citation(s) in RCA: 42] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2015] [Accepted: 09/22/2015] [Indexed: 12/13/2022]
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14
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Rajasekaran G, Kamalakannan R, Shin SY. Enhancement of the anti-inflammatory activity of temporin-1Tl-derived antimicrobial peptides by tryptophan, arginine and lysine substitutions. J Pept Sci 2015; 21:779-785. [DOI: doi 10.1002/psc.2807] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/18/2023]
Affiliation(s)
- Ganesan Rajasekaran
- Department of Medical Science, Graduate School; Chosun University; Gwangju 501-759 Korea
| | | | - Song Yub Shin
- Department of Medical Science, Graduate School; Chosun University; Gwangju 501-759 Korea
- Department of Cellular and Molecular Medicine, School of Medicine; Chosun University; Gwangju 501-759 Korea
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15
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Rajasekaran G, Kamalakannan R, Shin SY. Enhancement of the anti-inflammatory activity of temporin-1Tl-derived antimicrobial peptides by tryptophan, arginine and lysine substitutions. J Pept Sci 2015; 21:779-85. [DOI: 10.1002/psc.2807] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2015] [Revised: 07/10/2015] [Accepted: 07/10/2015] [Indexed: 12/23/2022]
Affiliation(s)
- Ganesan Rajasekaran
- Department of Medical Science, Graduate School; Chosun University; Gwangju 501-759 Korea
| | | | - Song Yub Shin
- Department of Medical Science, Graduate School; Chosun University; Gwangju 501-759 Korea
- Department of Cellular and Molecular Medicine, School of Medicine; Chosun University; Gwangju 501-759 Korea
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16
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Synthesis of guanidinylated chitosan with the aid of multiple protecting groups and investigation of antibacterial activity. Carbohydr Polym 2015; 127:407-17. [DOI: 10.1016/j.carbpol.2015.03.061] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2015] [Revised: 02/22/2015] [Accepted: 03/14/2015] [Indexed: 01/30/2023]
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17
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Rapsch K, Bier FF, von Nickisch-Rosenegk M. Rational design of artificial β-strand-forming antimicrobial peptides with biocompatible properties. Mol Pharm 2014; 11:3492-502. [PMID: 25192319 DOI: 10.1021/mp500271c] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023]
Abstract
Because the intensive use of antibiotics has led to a large variety of resistant bacterial strains, therapeutic measures have become increasingly challenging. In order to ensure reliable treatment of diseases, alternative antimicrobial agents need to be explored. In this context, antimicrobial peptides have been discussed as novel bioactive molecules, which, however, may be limited in their applicability due to their high manufacturing costs and poor pharmacokinetic properties. Consequently, the design of artificial antimicrobial peptides featuring two flanking cationic regions and a hydrophobic center is presented. These sequences led to distinct antimicrobial activity on the same order of magnitude as that of naturally occurring reference peptides but with less cytotoxic or cytostatic drawbacks. Furthermore, a deletion and substitution library revealed the minimal sequence requirements. By analysis of the computed 3D structures of these peptides, a single characteristic β-strand was identified. This structural motif was pivotal for antimicrobial activity. Consequently, an optimized peptide sequence with antimicrobial and biocompatible properties was derived, and its application was demonstrated in a mixed culture experiment. Thus, it was shown that the optimized artificial antimicrobial peptide is suitable as a therapeutic agent and may be used as template for the development of new antimicrobial peptides with unique secondary structures.
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Affiliation(s)
- Karsten Rapsch
- Fraunhofer Institute for Biomedical Engineering IBMT , Branch Potsdam, Am Muehlenberg 13, 14476 Potsdam, Germany
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18
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Ashraf MA, Ullah S, Ahmad I, Qureshi AK, Balkhair KS, Abdur Rehman M. Green biocides, a promising technology: current and future applications to industry and industrial processes. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2014; 94:388-403. [PMID: 23983055 DOI: 10.1002/jsfa.6371] [Citation(s) in RCA: 60] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/24/2013] [Revised: 07/27/2013] [Accepted: 08/23/2013] [Indexed: 06/02/2023]
Abstract
The study of biofilms has skyrocketed in recent years due to increased awareness of the pervasiveness and impact of biofilms. It costs the USA literally billions of dollars every year in energy losses, equipment damage, product contamination and medical infections. But biofilms also offer huge potential for cleaning up hazardous waste sites, filtering municipal and industrial water and wastewater, and forming biobarriers to protect soil and groundwater from contamination. The complexity of biofilm activity and behavior requires research contributions from many disciplines such as biochemistry, engineering, mathematics and microbiology. The aim of this review is to provide a comprehensive analysis of emerging novel antimicrobial techniques, including those using myriad organic and inorganic products as well as genetic engineering techniques, the use of coordination complex molecules, composite materials and antimicrobial peptides and the use of lasers as such or their modified use in combination treatments. This review also addresses advanced and recent modifications, including methodological changes, and biocide efficacy enhancing strategies. This review will provide future planners of biofilm control technologies with a broad understanding and perspective on the use of biocides in the field of green developments for a sustainable future.
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Affiliation(s)
- Muhammad Aqeel Ashraf
- Department of Civil Engineering, Tokyo Institute of Technology, Tokyo, 152-8550, Japan; Department of Geology, University of Malaya, Kuala Lumpur, 50603, Malaysia; Department of Chemistry, University of Malaya, Kuala Lumpur, 50603, Malaysia
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Gopal R, Na H, Seo CH, Park Y. Antifungal activity of (KW)n or (RW)n peptide against Fusarium solani and Fusarium oxysporum. Int J Mol Sci 2012; 13:15042-53. [PMID: 23203110 PMCID: PMC3509626 DOI: 10.3390/ijms131115042] [Citation(s) in RCA: 26] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2012] [Revised: 08/14/2012] [Accepted: 10/17/2012] [Indexed: 11/16/2022] Open
Abstract
The presence of lysine (Lys) or arginine (Arg) and tryptophan (Trp) are important for the antimicrobial effects of cationic peptides. Therefore, we designed and synthesized a series of antimicrobial peptides with various numbers of Lys (or Arg) and Trp repeats [(KW and RW)(n)-NH(2), where n equals 2, 3, 4, or 5]. Antifungal activities of these peptides increased with chain length. Light microscopy demonstrated that longer peptides (n = 4, 5) strongly inhibited in vitro growth of Fusarium solani, and Fusarium oxysporum, at 4-32 μM. Furthermore, longer peptides displayed potent fungicidal activities against a variety of agronomical important filamentous fungi, including F. solani and F. oxysporum, at their minimal inhibitory concentrations (MICs). However, RW series peptides showed slightly higher fungicidal activities than KW peptides against the two strains. Taken together, the results of this study indicate that these short peptides would be good candidates for use as synthetic or transgenic antifungal agents.
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Affiliation(s)
- Ramamourthy Gopal
- Research Center for Proteineous Materials, Chosun University, Gwangju 501-759, Korea; E-Mail:
| | - Hyungjong Na
- Department of Biotechnology, Chosun University, Gwangju 501-759, Korea; E-Mail:
| | - Chang Ho Seo
- Department of Bioinformatics, Kongju National University, Kongju 314-701, Korea; E-Mail:
| | - Yoonkyung Park
- Research Center for Proteineous Materials, Chosun University, Gwangju 501-759, Korea; E-Mail:
- Department of Biotechnology, Chosun University, Gwangju 501-759, Korea; E-Mail:
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Hai Nan Y, Jacob B, Kim Y, Yub Shin S. Linear bactenecin analogs with cell selectivity and anti-endotoxic activity. J Pept Sci 2012; 18:740-7. [PMID: 23109411 DOI: 10.1002/psc.2460] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2012] [Revised: 08/29/2012] [Accepted: 09/21/2012] [Indexed: 11/09/2022]
Abstract
Bactenecin (Bac) is a 12-residue disulfide-linked antimicrobial peptide isolated from the granules of bovine neutrophils. In this study, to develop novel linear Bac analogs with cell selectivity and anti-endotoxic activity, we designed and synthesized a series of linear Bac analogs with amino acid substitution in Cys3,11 and/or Val6,7 of Bac. Among Bac analogs, some analogs (Bac-W, Bac-KW, Bac-L, Bac-KL, Bac-LW, and Bac-KLW) with higher hydrophobicity showed the amalgamated property of cell selectivity and anti-endotoxic activity. Furthermore, Bac-W, Bac-KW, Bac-LW, and Bac-KLW showed serum stability comparable with that of disulfide-bonded Bac. Therefore, these Bac analogs (Bac-W, Bac-KW, Bac-LW, and Bac-KLW) can serve as promising antibiotics for the development of therapeutic agents for treatment against endotoxic shock and bacterial infection. In addition, our results suggest that a little increase in hydrophobicity may be responsible for the decreased cell selectivity of the multiple Arg-containing peptides (Bac-W, Bac-L, and Bac-LW) over the multiple Lys-containing peptides (Bac-KW, Bac-KL, and Bac-KLW).
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Affiliation(s)
- Yong Hai Nan
- Department of Bio-Materials, Graduate School, Chosun University, Gwangju, 501-759, Korea
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Wada J, Kamada R, Imagawa T, Chuman Y, Sakaguchi K. Inhibition of tumor suppressor protein p53-dependent transcription by a tetramerization domain peptide via hetero-oligomerization. Bioorg Med Chem Lett 2012; 22:2780-3. [PMID: 22429466 DOI: 10.1016/j.bmcl.2012.02.085] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2012] [Revised: 02/23/2012] [Accepted: 02/24/2012] [Indexed: 12/28/2022]
Abstract
Tumor suppressor protein p53 induces cell cycle arrest, apoptosis, and senescence in response to cellular stresses. The p53 tetramer formation is essential for its functions. Despite of these crucial functions of p53 for integrity of genome, activation of the p53 signal pathway causes low induced pluripotent stem (iPS) cell generation efficiency. In this study, we report transient inhibition of p53-dependent transcription using a p53 tetramerization domain peptide that contains cell penetrating and nuclear localization signals. The peptide was efficiently introduced into cells and inhibited p21 expression via hetero-tetramerization with endogenous p53 protein. This method can be applied towards safe and efficient iPS cell generation.
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Affiliation(s)
- Junya Wada
- Department of Chemistry, Faculty of Science, Hokkaido University, Kita-ku, Sapporo, Japan
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Perez Espitia PJ, de Fátima Ferreira Soares N, Dos Reis Coimbra JS, de Andrade NJ, Souza Cruz R, Alves Medeiros EA. Bioactive Peptides: Synthesis, Properties, and Applications in the Packaging and Preservation of Food. Compr Rev Food Sci Food Saf 2012; 11:187-204. [PMID: 32368201 PMCID: PMC7194098 DOI: 10.1111/j.1541-4337.2011.00179.x] [Citation(s) in RCA: 99] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
Bioactive peptides are protein fragments which have a positive impact on the functions and conditions of living beings. Peptides have shown several useful properties for human health, including antimicrobial, antifungal, antiviral, and antitumor activities. These compounds are produced by almost all species of life. However, they are produced in limited quantities in nature. As a result, researchers have tried to synthesize bioactive peptides to study their properties and applications in various areas. Among their applications in food preservation, peptides have been incorporated into packaging materials. This review begins with a brief description of the methods used for the synthesis, purification, and characterization of peptides. Also, the main bioproperties and mechanisms of action of peptides are discussed. Finally, some applications of peptides are presented, especially their use in active packaging, their effects on the polymeric matrix, and peptide migration.
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Affiliation(s)
- Paula Judith Perez Espitia
- Authors Espitia, Soares, Coimbra, de Andrade, and Medeiros are with Food Technology Dept., Federal Univ. of Viçosa, Av. P. H. Rolfs, s/n, Campus Univ., 36570-000. Viçosa, Minas Gerais, Brazil. Author Cruz is with Food Technology Dept., State Univ. of Feira de Santana, Av. Transnordestina, s/n, Campus Univ., 44036-900. Feira de Santana, Bahía, Brazil. Direct inquiries to author Soares (E-mail: )
| | - Nilda de Fátima Ferreira Soares
- Authors Espitia, Soares, Coimbra, de Andrade, and Medeiros are with Food Technology Dept., Federal Univ. of Viçosa, Av. P. H. Rolfs, s/n, Campus Univ., 36570-000. Viçosa, Minas Gerais, Brazil. Author Cruz is with Food Technology Dept., State Univ. of Feira de Santana, Av. Transnordestina, s/n, Campus Univ., 44036-900. Feira de Santana, Bahía, Brazil. Direct inquiries to author Soares (E-mail: )
| | - Jane Sélia Dos Reis Coimbra
- Authors Espitia, Soares, Coimbra, de Andrade, and Medeiros are with Food Technology Dept., Federal Univ. of Viçosa, Av. P. H. Rolfs, s/n, Campus Univ., 36570-000. Viçosa, Minas Gerais, Brazil. Author Cruz is with Food Technology Dept., State Univ. of Feira de Santana, Av. Transnordestina, s/n, Campus Univ., 44036-900. Feira de Santana, Bahía, Brazil. Direct inquiries to author Soares (E-mail: )
| | - Nélio José de Andrade
- Authors Espitia, Soares, Coimbra, de Andrade, and Medeiros are with Food Technology Dept., Federal Univ. of Viçosa, Av. P. H. Rolfs, s/n, Campus Univ., 36570-000. Viçosa, Minas Gerais, Brazil. Author Cruz is with Food Technology Dept., State Univ. of Feira de Santana, Av. Transnordestina, s/n, Campus Univ., 44036-900. Feira de Santana, Bahía, Brazil. Direct inquiries to author Soares (E-mail: )
| | - Renato Souza Cruz
- Authors Espitia, Soares, Coimbra, de Andrade, and Medeiros are with Food Technology Dept., Federal Univ. of Viçosa, Av. P. H. Rolfs, s/n, Campus Univ., 36570-000. Viçosa, Minas Gerais, Brazil. Author Cruz is with Food Technology Dept., State Univ. of Feira de Santana, Av. Transnordestina, s/n, Campus Univ., 44036-900. Feira de Santana, Bahía, Brazil. Direct inquiries to author Soares (E-mail: )
| | - Eber Antonio Alves Medeiros
- Authors Espitia, Soares, Coimbra, de Andrade, and Medeiros are with Food Technology Dept., Federal Univ. of Viçosa, Av. P. H. Rolfs, s/n, Campus Univ., 36570-000. Viçosa, Minas Gerais, Brazil. Author Cruz is with Food Technology Dept., State Univ. of Feira de Santana, Av. Transnordestina, s/n, Campus Univ., 44036-900. Feira de Santana, Bahía, Brazil. Direct inquiries to author Soares (E-mail: )
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Nan YH, Park IS, Hahm KS, Shin SY. Antimicrobial activity, bactericidal mechanism and LPS-neutralizing activity of the cell-penetrating peptide pVEC and its analogs. J Pept Sci 2011; 17:812-7. [PMID: 21956793 DOI: 10.1002/psc.1408] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2011] [Revised: 06/27/2011] [Accepted: 07/03/2011] [Indexed: 11/10/2022]
Abstract
pVEC is a cell-penetrating peptide derived from the murine vascular endothelial-cadherin protein. To evaluate the potential of pVEC as antimicrobial peptide (AMP), we synthesized pVEC and its analogs with Trp and Arg/Lys substitution, and their antimicrobial and lipopolysaccharide (LPS)-neutralizing activities were investigated. pVEC and its analogs displayed a potent antimicrobial activity (minimal inhibitory concentration: 4-16 μM) against Gram-positive and Gram-negative bacteria but no or less hemolytic activity (less than 10% hemolysis) even at a concentration of 200 μM. These peptides induced a near-complete membrane depolarization (more than 80%) at 4 μM against Staphylococcus aureus and a significant dye leakage (35-70%) from bacterial membrane-mimicking liposome at a concentration as low as 1 μM. The fluorescence profiles of pVEC and its analogs in dye leakage from liposome and membrane depolarization were similar to those of a frog-derived AMP, magainin 2. These results suggest that pVEC and its analogs kill bacteria by forming a pore or ion channel in the cytoplasmic membrane. pVEC and its analogs significantly inhibited nitric oxide production or tumor necrosis factor-α release in LPS-stimulated mouse macrophage RAW264.7 cells at 10 to 50 μM, in which RAW264.7 were not damaged. Taken together, our results suggest that pVEC and its analogs with potent antimicrobial and LPS-neutralizing activities can serve as AMPs for the treatment of microbial infection and sepsis.
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Affiliation(s)
- Yong Hai Nan
- Department of Bio-Materials, Graduate School, Chosun University, Gwangju, 501-759, Korea
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