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Effects of Natural Rheum tanguticum on the Cell Wall Integrity of Resistant Phytopathogenic Pectobacterium carotovorum subsp. Carotovorum. MOLECULES (BASEL, SWITZERLAND) 2022; 27:molecules27165291. [PMID: 36014529 PMCID: PMC9414576 DOI: 10.3390/molecules27165291] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/14/2022] [Revised: 08/10/2022] [Accepted: 08/12/2022] [Indexed: 12/02/2022]
Abstract
The abuse of agricultural antibiotics has led to the emergence of drug-resistant phytopathogens. Rifampicin and streptomycin and streptomycin resistance Pectobacterium carotovorum subsp. carotovorum (PccS1) was obtained from pathological plants in a previous experiment. Rheum tanguticum, derived from the Chinese plateau area, exhibits excellent antibacterial activity against PccS1, yet the action mode has not been fully understood. In present text, the cell wall integrity of the PccS1 was tested by the variation of the cellular proteins, SDS polyacrylamide gel electrophoresis (SDS-PAGE), scanning electron microscopy (SEM) and Fourier transform infrared spectrophotometer (FTIR) characteristics. Label-free quantitative proteomics was further used to identify the DEPs in the pathogen response to treatment with Rheum tanguticum Maxim. ex Balf. extract (abbreviated as RTMBE). Based on the bioinformatics analysis of these different expressed proteins (DEPs), RTMBE mainly inhibited some key protein expressions of beta-Lactam resistance, a two-component system and phosphotransferase system. Most of these membrane proteins were extraordinarily suppressed, which was also consistent with the morphological tests. In addition, from the downregulated flagellar motility related proteins, it was also speculated that RTMBE played an essential antibacterial role by affecting the swimming motility of the cells. The results indicated that Rheum tanguticum can be used to attenuate the virulence of the drug-resistant phytopathogenic bacteria.
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Root-Associated Microbiomes, Growth and Health of Ornamental Geophytes Treated with Commercial Plant Growth-Promoting Products. Microorganisms 2021; 9:microorganisms9081785. [PMID: 34442864 PMCID: PMC8401597 DOI: 10.3390/microorganisms9081785] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Revised: 08/11/2021] [Accepted: 08/12/2021] [Indexed: 11/16/2022] Open
Abstract
The microbial community inhabiting a plant's root zone plays a crucial role in plant health and protection. To assess the ability of commercial plant growth-promoting products to enhance the positive effects of this environment, two products containing beneficial soil bacteria and a product containing plant extracts were tested on Zantedeschia aethiopica and Ornithogalum dubium. The products were tested in two different growing media: a soil and a soilless medium. The effects of these products on Pectobacterium brasiliense, the causal agent of soft rot disease, were also evaluated in vitro, and on naturally occurring infections in the greenhouse. The growing medium was found to have the strongest effect on the microbial diversity of the root-associated microbiome, with the next-strongest effect due to plant type. These results demonstrate that either a single bacterial strain or a product will scarcely reach the level that is required to influence soil microbial communities. In addition, the microbes cultured from these products, could not directly inhibit Pectobacterium growth in vitro. We suggest density-based and functional analyses in the future, to study the specific interactions between plants, soil type, soil microbiota and relevant pathogens. This should increase the effectiveness of bio-supplements and soil disinfestation with natural products, leading to more sustainable, environmentally friendly solutions for the control of bacterial plant diseases.
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Petti C. Phloroglucinol Mediated Plant Regeneration of Ornithogalum dubium as the Sole "Hormone-Like Supplement" in Plant Tissue Culture Long-Term Experiments. PLANTS (BASEL, SWITZERLAND) 2020; 9:E929. [PMID: 32717803 PMCID: PMC7464755 DOI: 10.3390/plants9080929] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Accepted: 07/17/2020] [Indexed: 06/11/2023]
Abstract
Tissue culture is an essential requirement in plant science to preserve genetic resources and to expand naturally occurring germplasm. A variety of naturally occurring and synthetic hormones are available to induce the processes of dedifferentiation and redifferentiation. Not all plant material is susceptible to tissue culture, and often complex media and hormone requirements are needed to achieve successful plant propagations. The availability of new hormones or chemicals acting as hormones are critical to the expansion of tissue culture potentials. Phloroglucinol has been shown to have certain hormone-like properties in a variety of studies. Ornithogalum dubium, an important geophyte species, was used to characterise the potential of phloroglucinol as the sole plant-like hormone in a tissue culture experiment. Tissue culture, plant regeneration, total phenolic and genetic variability were established by applying a variety of methods throughout long-term experiments. Phloroglucinol did induce callus formation and plant regeneration when used as the sole supplement in the media at a rate of 37%, thus demonstrating auxin/cytokines-like properties. Callus formation was of 3 types, friable and cellular, hard and compact, and a mixture of the two. The important finding was that direct somatogenesis did occur albeit more frequently on younger tissue, whereby rates of induction were up to 52%. It is concluded that phloroglucinol acts as a "hormone-like" molecule and can trigger direct embryogenesis without callus formation.
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Affiliation(s)
- Carloalberto Petti
- Institute of Technology Carlow, EnviroCORE, DSH, Kilkenny Road, R93 V960 Carlow, Ireland
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Wei Z, Arazi T, Hod N, Zohar M, Isaacson T, Doron-Faigenboim A, Reznik N, Yedidia I. Transcriptome Profiling of Ornithogalum dubium Leaves and Flowers to Identify Key Carotenoid Genes for CRISPR Gene Editing. PLANTS 2020; 9:plants9040540. [PMID: 32326260 PMCID: PMC7238968 DOI: 10.3390/plants9040540] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/24/2020] [Revised: 04/12/2020] [Accepted: 04/20/2020] [Indexed: 11/16/2022]
Abstract
Ornithogalum dubium is a popular ornamental monocot native to South Africa with flower colors ranging from pure white to deep orange. Gene editing based on the CRISPR/Cas9 system has recently been shown to hold potential for color improvement in ornamental flower crops. To apply this approach to Ornithogalum color manipulation, genomic or transcriptomic data must first be collected. Here, cDNA libraries of O. dubium leaves and flowers were constructed and sequenced using the Illumina HiSeq 2500. Over 155 million 100-bp paired-end reads were assembled into a transcriptome database of 360,689 contigs, of which 18,660 contigs were differentially expressed between leaves and flowers. Carotenoids are the main pigment imparting spectrum of orange hues to O. dubium flowers. By querying our database, we identified a total of 16 unique transcripts (unigenes) predicted to be involved in the carotenoid biosynthesis pathway of Ornithogalum. Combining carotenoid profiles, we further inferred several key unigenes responsible for floral coloration and accumulation in O. dubium, of which the gene LCYB/comp146645_c0 was found as a suitable target to generate potentially red flower varieties of O. dubium. Our research thus provides a framework for the application of CRISPR/Cas9 technology to improve this ornamental crop.
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Affiliation(s)
- Zunzheng Wei
- Institute of Plant Science, The Volcani Center, Agricultural Research Organization, Bet Dagan 50250, Israel; (Z.W.); (T.A.); (N.H.); (A.D.-F.); (N.R.)
| | - Tzahi Arazi
- Institute of Plant Science, The Volcani Center, Agricultural Research Organization, Bet Dagan 50250, Israel; (Z.W.); (T.A.); (N.H.); (A.D.-F.); (N.R.)
| | - Nofar Hod
- Institute of Plant Science, The Volcani Center, Agricultural Research Organization, Bet Dagan 50250, Israel; (Z.W.); (T.A.); (N.H.); (A.D.-F.); (N.R.)
| | - Matat Zohar
- Newe Yaar Research Center, Agricultural Research Organization, Ramat Yishay 30095, Israel; (M.Z.); (T.I.)
| | - Tal Isaacson
- Newe Yaar Research Center, Agricultural Research Organization, Ramat Yishay 30095, Israel; (M.Z.); (T.I.)
| | - Adi Doron-Faigenboim
- Institute of Plant Science, The Volcani Center, Agricultural Research Organization, Bet Dagan 50250, Israel; (Z.W.); (T.A.); (N.H.); (A.D.-F.); (N.R.)
| | - Noam Reznik
- Institute of Plant Science, The Volcani Center, Agricultural Research Organization, Bet Dagan 50250, Israel; (Z.W.); (T.A.); (N.H.); (A.D.-F.); (N.R.)
| | - Iris Yedidia
- Institute of Plant Science, The Volcani Center, Agricultural Research Organization, Bet Dagan 50250, Israel; (Z.W.); (T.A.); (N.H.); (A.D.-F.); (N.R.)
- Correspondence:
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Yedidia I, Schultz K, Golan A, Gottlieb HE, Kerem Z. Structural Elucidation of Three Novel Kaempferol O-tri-Glycosides that Are Involved in the Defense Response of Hybrid Ornithogalum to Pectobacterium carotovorum. Molecules 2019; 24:molecules24162910. [PMID: 31405174 PMCID: PMC6720968 DOI: 10.3390/molecules24162910] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2019] [Revised: 08/05/2019] [Accepted: 08/09/2019] [Indexed: 11/16/2022] Open
Abstract
Ornithogalum is an ornamental flowering species that grows from a bulb and is highly susceptible to soft-rot disease caused by Pectobacterium carotovorum (Pc). Interspecific hybridization between O. thyrsoides and O. dubium yielded hybrids with enhanced resistance to that pathogen. The hybrids displayed distinct phenolic-compound profiles with several peaks that were specifically heightened following Pc infection. Three of these compounds were isolated and identified as novel kaempferol O-tri-glycosides. The structures of these compounds were elucidated using reversed phase high-performance liquid chromatography (RP-LC), RP-LC coupled to high-resolution mass spectrometry (RP-LC-MS), and nuclear magnetic resonance (NMR) (1D 1H and 13C, DEPT, HMQC, HMBC, COSY, and NOE), in order to achieve pure and defined compounds data. The new compounds were finally identified as kaempferol 3-O-[4-O-α-l-(3-O-acetic)-rhamnopyranosyl-6-O-β-d-xylopyranosyl]-β-d-glucopyranoside, kaempferol 3-O-[4-O-α-l-(2-O-acetic)-rhamnopyranosyl-6-O-β-d-xylopyranosyl]-β-d-glucopyranoside and kaempferol 3-O-[4-O-α-l-(2,3-O-diacetic)-rhamnopyranosyl-6-O-β-d-xylopyranosyl]-β-d-glucopyranoside.
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Affiliation(s)
- Iris Yedidia
- Department of Ornamental Horticulture, ARO, Volcani Center, Derech Hamacabim 20 P.O. Box 6, 50250 Bet-Dagan, Israel
| | - Keren Schultz
- Institute of Biochemistry, Food Science and Nutrition, The Robert H Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, P.O. Box 12, 7610001 Rehovot, Israel
| | - Avner Golan
- Department of Ornamental Horticulture, ARO, Volcani Center, Derech Hamacabim 20 P.O. Box 6, 50250 Bet-Dagan, Israel
- Institute of Biochemistry, Food Science and Nutrition, The Robert H Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, P.O. Box 12, 7610001 Rehovot, Israel
| | - Hugo E Gottlieb
- Department of Chemistry, Bar Ilan University, 52900 Ramat-Gan, Israel
| | - Zohar Kerem
- Institute of Biochemistry, Food Science and Nutrition, The Robert H Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, P.O. Box 12, 7610001 Rehovot, Israel.
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Lipsky A, Joshi JR, Carmi N, Yedidia I. Expression levels of antimicrobial peptide tachyplesin I in transgenic Ornithogalum lines affect the resistance to Pectobacterium infection. J Biotechnol 2016; 238:22-29. [PMID: 27639550 DOI: 10.1016/j.jbiotec.2016.09.008] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2016] [Revised: 09/08/2016] [Accepted: 09/13/2016] [Indexed: 10/21/2022]
Abstract
The genus Ornithogalum includes several ornamental species that suffer substantial losses from bacterial soft rot caused by Pectobacteria. The absence of effective control measures for use against soft rot bacteria led to the initiation of a project in which a small antimicrobial peptide from an Asian horseshoe crab, tachyplesin (tpnI), was introduced into two commercial cultivars: O. dubium and O. thyrsoides. Disease severity and bacterial colonization were examined in transgenic lines expressing this peptide. Disease resistance was evaluated in six lines of each species by measuring bacterial proliferation in the plant tissue. Three transgenic lines of each species were subjected to further analysis in which the expression level of the transgene was evaluated using RT-PCR and qRT-PCR. The development of disease symptoms and bacterial colonization of the plant tissue were also examined using GFP-expressing strain of P. carotovorum subsp. brasiliense Pcb3. Confocal-microscopy imaging revealed significantly reduced quantities of bacterial cells in the transgenic plant lines that had been challenged with the bacterium. The results clearly demonstrate that tpnI expression reduces bacterial proliferation, colonization and disease symptom (reduced by 95-100%) in the transgenic plant tissues. The quantity of tpnI transcripts, as measured by qRT-PCR, was negatively correlated with the protection afforded to the plants, as measured by the reduced severity of disease symptoms in the tissue.
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Affiliation(s)
- Alexander Lipsky
- Department of Plant Sciences, Agricultural Research Organization, The Volcani Center, Bet Dagan, Israel
| | - Janak Raj Joshi
- Department of Plant Sciences, Agricultural Research Organization, The Volcani Center, Bet Dagan, Israel; Department of Plant Pathology and Microbiology and the Otto Warburg Minerva Center for Agricultural Biotechnology, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Nir Carmi
- Department of Plant Sciences, Agricultural Research Organization, The Volcani Center, Bet Dagan, Israel
| | - Iris Yedidia
- Department of Plant Sciences, Agricultural Research Organization, The Volcani Center, Bet Dagan, Israel.
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