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Cao Y, Zhang J, Du P, Ji J, Zhang X, Xu J, Ma C, Liang B. Melatonin alleviates cadmium toxicity by regulating root endophytic bacteria community structure and metabolite composition in apple. TREE PHYSIOLOGY 2024; 44:tpae009. [PMID: 38224320 DOI: 10.1093/treephys/tpae009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/19/2023] [Accepted: 01/10/2024] [Indexed: 01/16/2024]
Abstract
The level of cadmium (Cd) accumulation in orchard soils is increasing, and excess Cd will cause serious damage to plants. Melatonin is a potent natural antioxidant and has a potential role in alleviating Cd stress. This study aimed to investigate the effects of exogenous melatonin on a root endophyte bacteria community and metabolite composition under Cd stress. The results showed that melatonin significantly scavenged the reactive oxygen species and restored the photosynthetic system (manifested by the improved photosynthetic parameters, total chlorophyll content and the chlorophyll fluorescence parameters (Fv/Fm)), increased the activity of antioxidant enzymes (the activities of catalase, superoxide dismutase, peroxidase and ascorbate oxidase) and reduced the concentration of Cd in the roots and leaves of apple plants. High-throughput sequencing showed that melatonin increased the endophytic bacterial community richness significantly and changed the community structure under Cd stress. The abundance of some potentially beneficial endophytic bacteria (Ohtaekwangia, Streptomyces, Tabrizicola and Azovibrio) increased significantly, indicating that the plants may absorb potentially beneficial microorganisms to resist Cd stress. The metabolomics results showed that melatonin significantly changed the composition of root metabolites, and the relative abundance of some metabolites decreased, suggesting that melatonin may resist Cd stress by depleting root metabolites. In addition, co-occurrence network analysis indicated that some potentially beneficial endophytes may be influenced by specific metabolites. These results provide a theoretical basis for studying the effects of melatonin on the endophytic bacterial community and metabolic composition in apple plants.
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Affiliation(s)
- Yang Cao
- College of Horticulture, Hebei Agricultural University, No. 289 Lingyusi Street, Baoding 071001, Hebei, China
| | - Jiran Zhang
- College of Horticulture, Hebei Agricultural University, No. 289 Lingyusi Street, Baoding 071001, Hebei, China
| | - Peihua Du
- College of Horticulture, Hebei Agricultural University, No. 289 Lingyusi Street, Baoding 071001, Hebei, China
| | - Jiahao Ji
- College of Horticulture, Hebei Agricultural University, No. 289 Lingyusi Street, Baoding 071001, Hebei, China
| | - Xue Zhang
- College of Horticulture, Hebei Agricultural University, No. 289 Lingyusi Street, Baoding 071001, Hebei, China
| | - Jizhong Xu
- College of Horticulture, Hebei Agricultural University, No. 289 Lingyusi Street, Baoding 071001, Hebei, China
| | - Changqing Ma
- College of Horticulture, Qingdao Agricultural University, No. 700 Changcheng Road, Qingdao 266109, Shandong, China
| | - Bowen Liang
- College of Horticulture, Hebei Agricultural University, No. 289 Lingyusi Street, Baoding 071001, Hebei, China
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Kaya C, Akin S, Sarioğlu A, Ashraf M, Alyemeni MN, Ahmad P. Enhancement of soybean tolerance to water stress through regulation of nitrogen and antioxidant defence mechanisms mediated by the synergistic role of salicylic acid and thiourea. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 207:108320. [PMID: 38183901 DOI: 10.1016/j.plaphy.2023.108320] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/17/2023] [Revised: 12/10/2023] [Accepted: 12/26/2023] [Indexed: 01/08/2024]
Abstract
Water stress (WS) poses a significant threat to global food and energy security by adversely affecting soybean growth and nitrogen metabolism. This study explores the synergistic effects of exogenous salicylic acid (SA, 0.5 mM) and thiourea (TU, 400 mg L-1), potent plant growth regulators, on soybean responses under WS conditions. The treatments involved foliar spraying for 3 days before inducing WS by reducing soil moisture to 50% of field capacity, followed by 2 weeks of cultivation under normal or WS conditions. WS significantly reduced plant biomass, chlorophyll content, photosynthetic efficiency, water status, protein content, and total nitrogen content in roots and leaves. Concurrently, it elevated levels of leaf malondialdehyde, H2O2, proline, nitrate, and ammonium. WS also triggered an increase in antioxidant enzyme activity and osmolyte accumulation in soybean plants. Application of SA and TU enhanced the activities of key enzymes crucial for nitrogen assimilation and amino acid synthesis. Moreover, SA and TU improved plant growth, water status, chlorophyll content, photosynthetic efficiency, protein content, and total nitrogen content, while reducing oxidative stress and leaf proline levels. Indeed, the simultaneous application of SA and TU demonstrated a heightened impact compared to their separate use, suggesting a synergistic interaction. This study underscores the potential of SA and TU to enhance WS tolerance in soybean plants by modulating nitrogen metabolism and mitigating oxidative damage. These findings hold significant promise for improving crop productivity and quality in the face of escalating water limitations due to climate change.
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Affiliation(s)
- Cengiz Kaya
- Harran University, Department of Soil Science and Plant Nutrition, Sanliurfa, Turkey.
| | - Sabri Akin
- Harran University, Department of Agricultural Structures and Irrigation, Sanliurfa, Turkey
| | - Ali Sarioğlu
- Harran University, Department of Soil Science and Plant Nutrition, Sanliurfa, Turkey
| | - Muhammad Ashraf
- Institute of Molecular Biology and Biotechnology, The University of Lahore, Pakistan
| | | | - Parvaiz Ahmad
- Department of Botany, GDC, Pulwama, 192301, Jammu and Kashmir, India.
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3
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Karami S, Shiran B, Ravash R, Fallahi H. A comprehensive analysis of transcriptomic data for comparison of plants with different photosynthetic pathways in response to drought stress. PLoS One 2023; 18:e0287761. [PMID: 37368898 DOI: 10.1371/journal.pone.0287761] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2023] [Accepted: 06/11/2023] [Indexed: 06/29/2023] Open
Abstract
The main factor leading to a decrease in crop productivity is abiotic stresses, particularly drought. Plants with C4 and CAM photosynthesis are better adapted to drought-prone areas than C3 plants. Therefore, it is beneficial to compare the stress response of plants with different photosynthetic pathways. Since most crops are C3 and C4 plants, this study focused on conducting an RNA-seq meta-analysis to investigate and compare how C3 and C4 plants respond to drought stress at the gene expression level in their leaves. Additionally, the accuracy of the meta-analysis results was confirmed with RT-qPCR. Based on the functional enrichment and network analysis, hub genes related to ribosomal proteins and photosynthesis were found to play a potential role in stress response. Moreover, our findings suggest that the low abundant amino acid degradation pathway, possibly through providing ATP source for the TCA cycle, in both groups of plants and the activation of the OPPP pathway in C4 plants, through providing the electron source required by this plant, can help to improve drought stress tolerance.
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Affiliation(s)
- Shima Karami
- Department of Biotechnology and Plant Breeding, Faculty of Agriculture, Shahrekord University, Shahrekord, Iran
| | - Behrouz Shiran
- Department of Biotechnology and Plant Breeding, Faculty of Agriculture, Shahrekord University, Shahrekord, Iran
- Institute of Biotechnology, Shahrekord University, Shahrekord, Iran
| | - Rudabeh Ravash
- Department of Biotechnology and Plant Breeding, Faculty of Agriculture, Shahrekord University, Shahrekord, Iran
| | - Hossein Fallahi
- Department of Biology, Faculty of Sciences, Razi University, Kermanshah, Iran
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Lyu M, Liu J, Xu X, Liu C, Qin H, Zhang X, Tian G, Jiang H, Jiang Y, Zhu Z, Ge S. Magnesium alleviates aluminum-induced growth inhibition by enhancing antioxidant enzyme activity and carbon-nitrogen metabolism in apple seedlings. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2023; 249:114421. [PMID: 36529044 DOI: 10.1016/j.ecoenv.2022.114421] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/21/2022] [Revised: 12/07/2022] [Accepted: 12/10/2022] [Indexed: 06/17/2023]
Abstract
Previous studies have determined that magnesium (Mg) in appropriate concentrations prevents plants from suffering from abiotic stress. To better understand the mechanism of Mg alleviation of aluminum (Al) stress in apple, we investigated the effect of Mg on plant growth, photosynthetic fluorescence, antioxidant system, and carbon (C) and nitrogen (N) metabolism of apple seedlings under Al toxicity (1.5 mmol/L) via a hydroponic experiment. Al stress induced the production of reactive oxygen in the leaves and roots and reduced the total dry weight (DW) by 52.37 % after 20 days of treatment relative to plants grown without Al, due to hindered photosynthesis and alterations in C and N metabolism. By contrast, total DW decreased by only 11.07 % in the Mg-treated plants under Al stress. Supplementation with 3.0 mmol/L Mg in the Al treatment decreased Al accumulation in the apple plants and reduced Al-induced oxidative damage by enhancing the activity of antioxidant enzymes (superoxide dismutase, catalase, and peroxidase) and reducing the production of H2O2 and malondialdehyde (MDA). Under Al stress, the Mg-treated plants showed a 46.17 % higher photosynthetic rate than the non-treated plants. Supplementation with Mg significantly increased the sucrose content by increasing sucrose synthase (SS) and sucrose-phosphate synthase (SPS) activities. Moreover, Mg facilitated the transport of 13C-carbohydrates from the leaves to roots. Regarding N metabolism, the nitrate reductase (NR), glutamine synthase (GS), and glutamate synthase (GOGAT) activities in the roots and leaves of the Mg-treated plants were significantly higher than those of the non-treated plants under Al stress. Compared with the non-treated plants under Al stress, the Mg-treated plants exhibited a significantly high level of NO3- and soluble protein content in the leaves, roots, and stems, but a low level of free amino acids. Furthermore, Mg significantly improved nitrogen accumulation and enhanced the transport of 15N from the roots to leaves. Overall, our results revealed that Mg alleviates Al-induced growth inhibition by enhancing antioxidant capacity and C-N metabolism in apple seedlings.
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Affiliation(s)
- Mengxue Lyu
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Jingquan Liu
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Xinxiang Xu
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Chunling Liu
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Hanhan Qin
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Xuelin Zhang
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Ge Tian
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Han Jiang
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China
| | - Yuanmao Jiang
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China.
| | - Zhanling Zhu
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China.
| | - Shunfeng Ge
- State Key Laboratory of Crop Biology, College of Horticulture Science and Engineering, Shandong Agricultural University, Tai'an, Shandong, China.
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Jin F, Hua M, Song L, Cui S, Sun H, Kong W, Hao Z. Transcriptome analysis of gene expression in the tomato leaf premature senescence mutant. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2022; 28:1501-1513. [PMID: 36389094 PMCID: PMC9530104 DOI: 10.1007/s12298-022-01223-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/07/2022] [Revised: 08/06/2022] [Accepted: 08/11/2022] [Indexed: 06/16/2023]
Abstract
UNLABELLED Premature senescence of leaves can critically influence tomato yield and quality. In this study, the leaf premature senescence mutant MT318 was a spontaneous mutant and was controlled by a single recessive nuclear gene. The maximum photochemical efficiency (Fv/Fm), superoxide dismutase (SOD), and chlorophyll content in the leaves of mutant MT318 gradually decreased, while malondialdehyde (MDA) content significantly increased. Under the level 2 category, Gene Ontology (GO) enrichment analysis indicated that 45 terms were enriched, comprising 22 in biological process, 12 in cellular component, and 11 in molecular function. Genes are mainly involved in the metabolic processes (696 differentially expressed genes, DEGs), cellular processes (573 DEGs), single-organism processes (503 DEGs), and catalytic activity (675 DEGs). Kyoto Encyclopedia of Genes and Genomes pathway analysis demonstrated that the 4 pathways with the largest number of genes were biosynthesis of secondary metabolites, plant-pathogen interaction, plant hormone signal transduction, and MAPK signaling pathway-plant. The 'plant hormone signal transduction' pathway was the most significantly enriched at the T2 stage. Pearson correlation analysis showed that the auxin regulatory pathway and SA signal transduction pathway may play important roles. These results not only lay the foundation for the further cloning and functional analysis of the MT318 premature senescence gene but also provide a reference for the study of tomato leaf senescence. SUPPLEMENTARY INFORMATION The online version contains supplementary material available at 10.1007/s12298-022-01223-2.
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Affiliation(s)
- Fengmei Jin
- Tianjin Academy of Agriculture Sciences, Tianjin, 300192 China
| | - Mingyan Hua
- Tianjin Academy of Agriculture Sciences, Tianjin, 300192 China
| | - Lanfang Song
- Tianjin Academy of Agriculture Sciences, Tianjin, 300192 China
| | - Shaojie Cui
- Tianjin Academy of Agriculture Sciences, Tianjin, 300192 China
| | - Haibo Sun
- Tianjin Academy of Agriculture Sciences, Tianjin, 300192 China
| | - Weidong Kong
- Tianjin Academy of Agriculture Sciences, Tianjin, 300192 China
| | - Zhiyu Hao
- Tianjin Academy of Agriculture Sciences, Tianjin, 300192 China
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Li Z, Chen Q, Gao F, Meng Q, Li M, Zhang Y, Zhang P, Zhang M, Liu Z. Controlled-release urea combined with fulvic acid enhanced carbon/nitrogen metabolic processes and maize growth. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2022; 102:3644-3654. [PMID: 34888887 DOI: 10.1002/jsfa.11711] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/19/2021] [Revised: 12/04/2021] [Accepted: 12/07/2021] [Indexed: 06/13/2023]
Abstract
BACKGROUND Controlled-release urea (CRU) or fulvic acid (FA), when applied, have been shown to increase nitrogen (N) use efficiency (NUE) or to stimulate plant growth, yet their interactive effects are not well explored. The objective of this study was to investigate the synergistic mechanisms of CRU combined with FA (CRU + FA) on maize (Zea mays L.) growth. Through the experimental design with five treatments, the N metabolism through the transcriptomic analysis of maize leaf, endogenous hormones, photosynthesis enzymes in maize leaf and root, and maize yield and NUE were evaluated. RESULTS Compared with CRU treatment, CRU + FA treatment significantly increased auxin, nitrate reductase, and glutamate dehydrogenase in leaf by 35.4%, 43.9%, 40.8% and 19.5%, respectively, as well as, the relative content of the leaf chlorophyll and photosynthetic rate by 14.8% and 45.6%, respectively, at 12-leaf collar stage; the carbon/nitrogen (C/N) metabolic process was significantly enriched in CRU + FA treatment by 312 and 418 genes, according to transcriptome profiles of C/N metabolic in leaves from various fertilizer treated maize; maize yield and NUE of CRU + FA treatment were increased by 6.3% and 38.4%, respectively. CONCLUSIONS These results demonstrated that CRU + FA is a viable fertilization scheme that can enhance maize growth, yield and NUE through their synergies in improving N uptake, promoting photosynthesis, increasing C/N metabolic processes, and enhancing enzyme activities. © 2021 Society of Chemical Industry.
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Affiliation(s)
- Zeli Li
- National Engineering Laboratory for Efficient Use of Soil and Fertilizer Resources, College of Resources and the Environment, Shandong Agricultural University, Taian, China
| | - Qi Chen
- National Engineering Laboratory for Efficient Use of Soil and Fertilizer Resources, College of Resources and the Environment, Shandong Agricultural University, Taian, China
| | - Feng Gao
- National Engineering Laboratory for Efficient Use of Soil and Fertilizer Resources, College of Resources and the Environment, Shandong Agricultural University, Taian, China
| | - Qingmin Meng
- National Engineering Laboratory for Efficient Use of Soil and Fertilizer Resources, College of Resources and the Environment, Shandong Agricultural University, Taian, China
| | - Mingyang Li
- National Engineering Laboratory for Efficient Use of Soil and Fertilizer Resources, College of Resources and the Environment, Shandong Agricultural University, Taian, China
| | - Yan Zhang
- Shandong Pengbo Biotechnology Co., Ltd, Taian, China
| | - Peng Zhang
- Shandong Wanhao Fertilizer Co. Ltd, Jinan, China
| | - Min Zhang
- National Engineering Laboratory for Efficient Use of Soil and Fertilizer Resources, College of Resources and the Environment, Shandong Agricultural University, Taian, China
| | - Zhiguang Liu
- National Engineering Laboratory for Efficient Use of Soil and Fertilizer Resources, College of Resources and the Environment, Shandong Agricultural University, Taian, China
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Ansari MA, Bano N, Kumar A, Dubey AK, Asif MH, Sanyal I, Pande V, Pandey V. Comparative transcriptomic analysis and antioxidant defense mechanisms in clusterbean (Cyamopsis tetragonoloba (L.) Taub.) genotypes with contrasting drought tolerance. Funct Integr Genomics 2022; 22:625-642. [PMID: 35426545 DOI: 10.1007/s10142-022-00860-w] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Revised: 04/07/2022] [Accepted: 04/07/2022] [Indexed: 01/16/2023]
Abstract
To understand drought tolerance mechanism(s) in clusterbean (Cyamopsis tetragonoloba), we conducted physiological, biochemical, and de novo comparative transcriptome analysis of drought-tolerant (RGC-1002) and drought-sensitive (RGC-1066) genotypes subjected to 30 days of drought stress. Relative water content (RWC) was maintained in tolerant genotype but was reduced in sensitive genotype. Leaf pigment concentrations were higher in tolerant genotype. Net photosynthesis was significantly decreased in sensitive genotype but insignificant reduction was found in tolerant genotype. Enzymatic antioxidant (GR, APX, DHAR) activities were enhanced in tolerant genotype, while there were insignificant changes in these enzymes in sensitive genotype. The ratios of antioxidant molecules (ASC/DHA and GSH/GSSG) were higher in tolerant genotype as compared to sensitive genotype. In sensitive genotype, 6625 differentially expressed genes (DEGs) were upregulated and 5365 genes were downregulated. In tolerant genotype, 5206 genes were upregulated and 2793 genes were downregulated. In tolerant genotype, transketolase family protein, phosphoenolpyruvate carboxylase 3, temperature-induced lipocalin, and cytochrome oxidase were highly upregulated. Moreover, according to Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, the drought tolerance may be attributed to upregulated starch and sucrose metabolism-related genes in tolerant genotype. Finally, quantitative real-time PCR confirmed the reproducibility of the RNA-seq data.
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Affiliation(s)
- Mohd Akram Ansari
- Plant Ecology and Climate Change Science Division, CSIR-NBRI, Lucknow, India. .,Department of Biotechnology, Bhimtal Campus, Kumaun University, Nainital, India.
| | - Nasreen Bano
- Plant Molecular Biology and Biotechnology Division, CSIR-NBRI, Lucknow, India
| | - Anil Kumar
- Department of Biotechnology, Bhimtal Campus, Kumaun University, Nainital, India.,Plant Molecular Biology and Biotechnology Division, CSIR-NBRI, Lucknow, India
| | - Arvind Kumar Dubey
- Department of Biotechnology, Bhimtal Campus, Kumaun University, Nainital, India.,Plant Molecular Biology and Biotechnology Division, CSIR-NBRI, Lucknow, India
| | - Mehar Hasan Asif
- Plant Molecular Biology and Biotechnology Division, CSIR-NBRI, Lucknow, India
| | - Indraneel Sanyal
- Plant Molecular Biology and Biotechnology Division, CSIR-NBRI, Lucknow, India
| | - Veena Pande
- Department of Biotechnology, Bhimtal Campus, Kumaun University, Nainital, India
| | - Vivek Pandey
- Plant Ecology and Climate Change Science Division, CSIR-NBRI, Lucknow, India.
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Ren J, Yang X, Zhang N, Feng L, Ma C, Wang Y, Yang Z, Zhao J. Melatonin alleviates aluminum-induced growth inhibition by modulating carbon and nitrogen metabolism, and reestablishing redox homeostasis in Zea mays L. JOURNAL OF HAZARDOUS MATERIALS 2022; 423:127159. [PMID: 34537633 DOI: 10.1016/j.jhazmat.2021.127159] [Citation(s) in RCA: 30] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/16/2021] [Revised: 08/30/2021] [Accepted: 09/04/2021] [Indexed: 05/11/2023]
Abstract
Melatonin, a regulatory molecule, performs pleiotropic functions in plants, including aluminum (Al) stress mitigation. Here, we conducted transcriptomic and physiological analyses to identify metabolic processes associated with the alleviated Al-induced growth inhibition of the melatonin-treated (MT) maize (Zea mays L.) seedlings. Melatonin decreased Al concentration in maize roots and leaves under Al stress. Al stress reduced the total dry weight (DW) by 41.2% after 7 days of treatment. By contrast, the total DW was decreased by only 19.4% in MT plants. According to RNA-Seq, enzyme activity, and metabolite content data, MT plants exhibited a higher level of relatively stable carbon and nitrogen metabolism than non-treated (NT) plants. Under Al stress, MT plants showed higher photosynthetic rate and sucrose content by 29.9% and 20.5% than NT plants, respectively. Similarly, the nitrate reductase activity and protein content of MT plants were 34.0% and 15.0% higher than those of NT plants, respectively. Furthermore, exogenous supply of melatonin mitigated Al-induced oxidative stress. Overall, our results suggest that melatonin alleviates aluminum-induced growth inhibition through modulating carbon and nitrogen metabolism, and reestablishing redox homeostasis in maize. Graphical Abstarct.
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Affiliation(s)
- Jianhong Ren
- College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi 030800, China; State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, Yangling, Shaanxi 712100, China; College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Xiaoxiao Yang
- College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi 030800, China; State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Institute of Soil and Water Conservation, Northwest A&F University, Yangling, Shaanxi 712100, China; College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Ning Zhang
- College of Life Sciences, Northwest A&F University, Yangling, Shaanxi 712100, China
| | - Lu Feng
- Key Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093, China
| | - Chunying Ma
- College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi 030800, China
| | - Yuling Wang
- College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi 030800, China
| | - Zhenping Yang
- College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi 030800, China.
| | - Juan Zhao
- College of Agriculture, Shanxi Agricultural University, Taigu, Shanxi 030800, China.
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Physiological and transcriptome analyses for assessing the effects of exogenous uniconazole on drought tolerance in hemp (Cannabis sativa L.). Sci Rep 2021; 11:14476. [PMID: 34262091 PMCID: PMC8280108 DOI: 10.1038/s41598-021-93820-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2021] [Accepted: 06/30/2021] [Indexed: 02/06/2023] Open
Abstract
Uniconazole (S-(+)-uniconazole), a plant growth retardant, exerts key roles in modulating growth and development and increasing abiotic stress tolerance in plants. However, the underlying mechanisms by which uniconazole regulates drought response remain largely unknown. Here, the effects of exogenous uniconazole on drought tolerance in hemp were studied via physiological and transcriptome analyses of the drought-sensitive industrial hemp cultivar Hanma No. 2 grown under drought stress. Exogenous uniconazole treatment increased hemp tolerance to drought-induced damage by enhancing chlorophyll content and photosynthesis capacity, regulating activities of enzymes involved in carbon and nitrogen metabolism, and altering endogenous hormone levels. Expression of genes associated with porphyrin and chlorophyll metabolism, photosynthesis-antenna proteins, photosynthesis, starch and sucrose metabolism, nitrogen metabolism, and plant hormone signal transduction were significantly regulated by uniconazole compared with that by control (distilled water) under drought stress. Numerous genes were differentially expressed to increase chlorophyll content, enhance photosynthesis, regulate carbon-nitrogen metabolism-related enzyme activities, and alter endogenous hormone levels. Thus, uniconazole regulated physiological and molecular characteristics of photosynthesis, carbon-nitrogen metabolism, and plant hormone signal transduction to enhance drought resistance in industrial hemp.
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Yan H, Mao P. Comparative Time-Course Physiological Responses and Proteomic Analysis of Melatonin Priming on Promoting Germination in Aged Oat ( Avena sativa L.) Seeds. Int J Mol Sci 2021; 22:ijms22020811. [PMID: 33467472 PMCID: PMC7830126 DOI: 10.3390/ijms22020811] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2020] [Revised: 01/05/2021] [Accepted: 01/12/2021] [Indexed: 01/25/2023] Open
Abstract
Melatonin priming is an effective strategy to improve the germination of aged oat (Avena sativa L.) seeds, but the mechanism involved in its time-course responses has remained largely unknown. In the present study, the phenotypic differences, ultrastructural changes, physiological characteristics, and proteomic profiles were examined in aged and melatonin-primed seed (with 10 μM melatonin treatment for 12, 24, and 36 h). Thus, 36 h priming (T36) had a better remediation effect on aged seeds, reflecting in the improved germinability and seedlings, relatively intact cell ultrastructures, and enhanced antioxidant capacity. Proteomic analysis revealed 201 differentially abundant proteins between aged and T36 seeds, of which 96 were up-accumulated. In melatonin-primed seeds, the restoration of membrane integrity by improved antioxidant capacity, which was affected by the stimulation of jasmonic acid synthesis via up-accumulation of 12-oxo-phytodienoic acid reductase, might be a candidate mechanism. Moreover, the relatively intact ultrastructures enabled amino acid metabolism and phenylpropanoid biosynthesis, which were closely associated with energy generation through intermediates of pyruvate, phosphoenolpyruvate, fumarate, and α-ketoglutarate, thus providing energy, active amino acids, and secondary metabolites necessary for germination improvement of aged seeds. These findings clarify the time-course related pathways associated with melatonin priming on promoting the germination of aged oat seeds.
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Affiliation(s)
- Huifang Yan
- Forage Seed Laboratory, China Agricultural University, Beijing 100193, China;
- Grassland Agri-Husbandry Research Center, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Peisheng Mao
- Forage Seed Laboratory, China Agricultural University, Beijing 100193, China;
- Correspondence: ; Tel.: +86-010-62733311
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11
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Zhao C, Guo H, Wang J, Wang Y, Zhang R. Melatonin Enhances Drought Tolerance by Regulating Leaf Stomatal Behavior, Carbon and Nitrogen Metabolism, and Related Gene Expression in Maize Plants. FRONTIERS IN PLANT SCIENCE 2021; 12:779382. [PMID: 34966404 PMCID: PMC8710518 DOI: 10.3389/fpls.2021.779382] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2021] [Accepted: 11/15/2021] [Indexed: 05/07/2023]
Abstract
It is commonly known that exogenously applied melatonin can alleviate the impact of drought stress, but the mechanism used by melatonin to regulate stomatal behavior and carbon (C) and nitrogen (N) metabolism to increase drought resistance remains elusive. Herein, our aim was to investigate the influence of exogenous melatonin on the regulation of C and N metabolism in maize plants under water deficit. In this study, we analyzed stomatal behavior, the key components of C and N metabolism, and the gene expression and activity of enzymes involved in the C and N metabolism in maize plants. The results showed that the application of melatonin (100 μM) significantly increased maize growth and sustained the opening of stomata, and secondarily increased the photosynthetic capacity in maize. Under drought stress, foliar application of melatonin induced the gene transcription and activities of sucrose phosphate synthetase, ADP-glucose pyrophosphorylase, phosphoenolpyruvate carboxylase, and citrate synthase, resulting in the enhancement of sucrose and starch synthesis and the tricarboxylic acid (TCA) cycle. This enhancement in sugar biosynthesis and the TCA cycle might lead to stronger N assimilation. As anticipated, NO3 - reduction and NH4 + assimilation were also strengthened after melatonin treatment under drought stress. An increase was observed in some key enzymatic activities and transcription involved in nitrogen metabolism, such as that of nitrate reductase, nitrite reductase, glutamate synthase, and glutamine synthetase, in melatonin-treated, drought-stressed maize. Moreover, melatonin attenuated the drought-induced damage by reducing protein degradation and increasing the level of proline. Conclusively, our results indicate that exogenous melatonin enhances drought tolerance in maize via promoting stomatal opening and regulating C and N metabolism and related gene expression.
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Wang H, Wan Y, Buchner P, King R, Ma H, Hawkesford MJ. Phylogeny and gene expression of the complete NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER FAMILY in Triticum aestivum. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:4531-4546. [PMID: 32462194 PMCID: PMC7382379 DOI: 10.1093/jxb/eraa210] [Citation(s) in RCA: 26] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/03/2019] [Accepted: 05/04/2020] [Indexed: 05/10/2023]
Abstract
NPF genes encode membrane transporters involved in the transport of a large variety of substrates including nitrate and peptides. The NPF gene family has been described for many plants, but the whole NPF gene family for wheat has not been completely identified. The release of the wheat reference genome has enabled the identification of the entire wheat NPF gene family. A systematic analysis of the whole wheat NPF gene family was performed, including responses of specific gene expression to development and nitrogen supply. A total of 331 NPF genes (113 homoeologous groups) have been identified in wheat. The chromosomal location of the NPF genes is unevenly distributed, with predominant occurrence in the long arms of the chromosomes. The phylogenetic analysis indicated that wheat NPF genes are closely clustered with Arabidopsis, Brachypodium, and rice orthologues, and subdivided into eight subfamilies. The expression profiles of wheat NPF genes were examined using RNA-seq data, and a subset of 44 NPF genes (homoeologous groups) with contrasting expression responses to nitrogen and/or development in different tissues were identified. The systematic identification of gene composition, chromosomal locations, evolutionary relationships, and expression profiles contributes to a better understanding of the roles of the wheat NPF genes and lays the foundation for further functional analysis in wheat.
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Affiliation(s)
- Huadun Wang
- Institute of Food Crops, Provincial Key Laboratory of Agrobiology, Jiangsu Academy of Agricultural Sciences, Nanjing, China
| | | | | | - Robert King
- Rothamsted Research, West Common, Harpenden, UK
| | - Hongxiang Ma
- Institute of Food Crops, Provincial Key Laboratory of Agrobiology, Jiangsu Academy of Agricultural Sciences, Nanjing, China
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Liu G, Zenda T, Liu S, Wang X, Jin H, Dong A, Yang Y, Duan H. Comparative transcriptomic and physiological analyses of contrasting hybrid cultivars ND476 and ZX978 identify important differentially expressed genes and pathways regulating drought stress tolerance in maize. Genes Genomics 2020; 42:937-955. [PMID: 32623576 DOI: 10.1007/s13258-020-00962-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Accepted: 06/21/2020] [Indexed: 12/27/2022]
Abstract
BACKGROUND Drought is the major abiotic stress factor that negatively influences growth and yield in cereal grain crops such as maize (Zea mays L.). A multitude of genes and pathways tightly modulate plant growth, development and responses to environmental stresses including drought. Therefore, crop breeding efforts for enhanced drought resistance require improved knowledge of plant drought responses. OBJECTIVE Here, we sought to elucidate the molecular and physiological mechanisms underpinning maize drought stress tolerance. METHODS We therefore applied a 12-day water-deficit stress treatment to maize plants of two contrasting (drought tolerant ND476 and drought sensitive ZX978) hybrid cultivars at the late vegetative (V12) growth stage and performed a large-scale RNA sequencing (RNA-seq) transcriptome analysis of the leaf tissues. RESULTS A comparative analysis of the two genotypes leaf transcriptomes and physiological parameters revealed the key differentially expressed genes (DEGs) and metabolic pathways that respond to drought in a genotype-specific manner. A total of 3114 DEGs were identified, with 21 DEGs being specifically expressed in tolerant genotype ND476 in response to drought stress. Of these, genes involved in secondary metabolites biosynthesis, transcription factor regulation, detoxification and stress defense were highly expressed in ND476. Physiological analysis results substantiated our RNA-seq data, with ND476 exhibiting better cell water retention, higher soluble protein content and guaiacol peroxidase activity, along with low lipid peroxidation extent than the sensitive cultivar ZX978 under drought conditions. CONCLUSION Our findings enrich the maize genetic resources and enhance our further understanding of the molecular mechanisms regulating drought stress tolerance in maize. Additionally, the DEGs screened in this study may provide a foundational basis for our future targeted cloning studies.
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Affiliation(s)
- Guo Liu
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China
| | - Tinashe Zenda
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China
| | - Songtao Liu
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China
| | - Xuan Wang
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China
| | - Hongyu Jin
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China
| | - Anyi Dong
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China
| | - Yatong Yang
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China.,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China
| | - Huijun Duan
- Department of Crop Genetics and Breeding, College of Agronomy, Hebei Agricultural University, Baoding, 071001, China. .,North China Key Laboratory for Crop Germplasm Resources of the Education Ministry, Hebei Agricultural University, Baoding, 071001, China.
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Yan H, Jia S, Mao P. Melatonin Priming Alleviates Aging-Induced Germination Inhibition by Regulating β-oxidation, Protein Translation, and Antioxidant Metabolism in Oat ( Avena sativa L.) Seeds. Int J Mol Sci 2020; 21:ijms21051898. [PMID: 32164355 PMCID: PMC7084597 DOI: 10.3390/ijms21051898] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2020] [Revised: 03/06/2020] [Accepted: 03/07/2020] [Indexed: 12/20/2022] Open
Abstract
Although melatonin has been reported to play an important role in regulating metabolic events under adverse stresses, its underlying mechanisms on germination in aged seeds remain unclear. This study was conducted to investigate the effect of melatonin priming (MP) on embryos of aged oat seeds in relation to germination, ultrastructural changes, antioxidant responses, and protein profiles. Proteomic analysis revealed, in total, 402 differentially expressed proteins (DEPs) in normal, aged, and aged + MP embryos. The downregulated DEPs in aged embryos were enriched in sucrose metabolism, glycolysis, β-oxidation of lipid, and protein synthesis. MP (200 μM) turned four downregulated DEPs into upregulated DEPs, among which, especially 3-ketoacyl-CoA thiolase-like protein (KATLP) involved in the β-oxidation pathway played a key role in maintaining TCA cycle stability and providing more energy for protein translation. Furthermore, it was found that MP enhanced antioxidant capacity in the ascorbate-glutathione (AsA-GSH) system, declined reactive oxygen species (ROS), and improved cell ultrastructure. These results indicated that the impaired germination and seedling growth of aged seeds could be rescued to a certain level by melatonin, predominantly depending on β-oxidation, protein translation, and antioxidant protection of AsA-GSH. This work reveals new insights into melatonin-mediated mechanisms from protein profiles that occur in embryos of oat seeds processed by both aging and priming.
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Affiliation(s)
- Huifang Yan
- Forage Seed Laboratory, China Agricultural University, Beijing 100193, China; (H.Y.); (S.J.)
- Grassland Agri-husbandry Research Center, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Shangang Jia
- Forage Seed Laboratory, China Agricultural University, Beijing 100193, China; (H.Y.); (S.J.)
- Key Laboratory of Pratacultural Science, Beijing Municipality, China Agricultural University, Beijing 100193, China
| | - Peisheng Mao
- Forage Seed Laboratory, China Agricultural University, Beijing 100193, China; (H.Y.); (S.J.)
- Key Laboratory of Pratacultural Science, Beijing Municipality, China Agricultural University, Beijing 100193, China
- Correspondence: ; Tel.: +86-010-62733311
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Dissecting the Regulatory Network of Leaf Premature Senescence in Maize ( Zea mays L.) Using Transcriptome Analysis of ZmELS5 Mutant. Genes (Basel) 2019; 10:genes10110944. [PMID: 31752425 PMCID: PMC6895817 DOI: 10.3390/genes10110944] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2019] [Revised: 11/03/2019] [Accepted: 11/14/2019] [Indexed: 12/16/2022] Open
Abstract
Leaf premature senescence largely determines maize (Zea mays L.) grain yield and quality. A natural recessive premature-senescence mutant was selected from the breeding population, and near-isogenic lines were constructed using Jing24 as the recurrent parent. In the near-isogenic lines, the dominant homozygous material was wild-type (WT), and the recessive material of early leaf senescence was the premature-senescence-type ZmELS5. To identify major genes and regulatory mechanisms involved in leaf senescence, a transcriptome analysis of the ZmELS5 and WT near-isogenic lines (NILs) was performed. A total of 8796 differentially expressed transcripts were identified between ZmELS5 and WT, including 3811 up-regulated and 4985 down-regulated transcripts. By combining gene ontology, Kyoto Encyclopedia of Genes and Genomes, gene set, and transcription factor enrichment analyses, key differentially expressed genes were screened. The senescence regulatory network was predicted based on these key differentially expressed genes, which indicated that the senescence process is mainly regulated by bHLH, WRKY, and AP2/EREBP family transcription factors, leading to the accumulations of jasmonic acid and ethylene. This causes stress responses and reductions in the chlorophyll a/b-binding protein activity level. Then, decreased ATP synthase activity leads to increased photosystem II photodamage, ultimately leading to leaf senescence.
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