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Ghosh P, Rozenberg I, Maayan G. Sequence-function relationship within water-soluble Peptoid Chelators for Cu 2. J Inorg Biochem 2021; 217:111388. [PMID: 33618230 DOI: 10.1016/j.jinorgbio.2021.111388] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 01/31/2021] [Accepted: 02/05/2021] [Indexed: 12/26/2022]
Abstract
Chelation of Cu2+ by synthetic molecules is an emerging therapeutic approach for treating several illnesses in human body such as Wilson disease, cancer and more. Among synthetic metal chelators, those based on peptoids - N-substituted glycine oligomers - are advantageous due to their structural similarity to peptides, ease of synthesis on solid support and versatile controlled sequences. Tuning peptoid sequences, via systematically changing at least one side chain, can facilitate and control their function. Along these lines, this work aims to explore the role of the non-coordinating side chain within peptoid chelators in order to understand the factors that control the selectivity of these chelators to Cu2+ in water medium. To this aim, a set of peptoid trimers having a pyridine group at the acetylated N-terminal, a 2,2'-bipyridine group at the second position and a non-coordinating group at the C-terminus, where the latter is systematically varied between aromatic, aliphatic, chiral or non-chiral, were investigated as selective chelators for Cu2+. The effect of the position of the non-coordinating group on the selectivity of the peptoid to Cu2+ was also tested. Based on extensive spectroscopic data, we found that the choice of the non-coordinating group along with its position dramatically influences the selectivity of the peptoids to Cu2+. We showed that peptoids having bulky chiral groups at the C-terminus enable high selectivity to Cu2+. We further demonstrated the ability of one of the selective chelators to remove Cu2+ from the natural copper binding protein metallothionein in HEPES (4-(2-hydroxyethyl)-1-piperazineethanesulfonic acid) buffer medium.
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Affiliation(s)
- Pritam Ghosh
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Technion City, Haifa 3200008, Israel
| | - Ido Rozenberg
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Technion City, Haifa 3200008, Israel
| | - Galia Maayan
- Schulich Faculty of Chemistry, Technion-Israel Institute of Technology, Technion City, Haifa 3200008, Israel.
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2
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Lead(II) complexes with amide-appended tetraazamacrocyclic ligands – Synthesis, structure, characterization and calculation studies. Polyhedron 2020. [DOI: 10.1016/j.poly.2020.114822] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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3
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Thakur S, Drew MGB, Franconetti A, Frontera A, Chattopadhyay S. Stabilization of two conformers via intra- or inter-molecular hydrogen bonds in a dinuclear vanadium(v) complex with a pendant Schiff base: theoretical insight. RSC Adv 2019; 9:35165-35175. [PMID: 35530693 PMCID: PMC9074122 DOI: 10.1039/c9ra07006k] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2019] [Accepted: 09/17/2019] [Indexed: 01/19/2023] Open
Abstract
A dinuclear vanadium(v) complex, (μ-O)2[V(O)(L)]2, [where HL = 2-methoxy-6-((2-(2-hydroxyethylamino)ethylimino)methyl)phenol] has been synthesized and characterized by spectral and elemental analysis. A single crystal X-ray diffraction study confirms it structure. Two different conformations, stabilized via either intra- or inter-dinuclear hydrogen bonding interactions, co-exist in the solid-state structure. The energies of these intra- or inter-dinuclear hydrogen bonding interactions have been estimated by Density functional theory (DFT) calculations. A 'Non-covalent interaction' (NCI) plot has also been used to characterize these interactions.
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Affiliation(s)
- Snehasish Thakur
- Department of Chemistry, Inorganic Section, Jadavpur University Kolkata 700 032 India
| | - Michael G B Drew
- School of Chemistry, The University of Reading P.O. Box 224, Whiteknights Reading RG6 6AD UK
| | - Antonio Franconetti
- Departament de Química, Universitat de les Illes Balears Crta. De Valldemossa km 7.5 07122 Palma Baleares Spain
| | - Antonio Frontera
- Departament de Química, Universitat de les Illes Balears Crta. De Valldemossa km 7.5 07122 Palma Baleares Spain
| | - Shouvik Chattopadhyay
- Department of Chemistry, Inorganic Section, Jadavpur University Kolkata 700 032 India
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Li M, Drosos M, Hu H, He X, Wang G, Zhang H, Hu Z, Xi B. Organic amendments affect dissolved organic matter composition and mercury dissolution in pore waters of mercury-polluted paddy soil. CHEMOSPHERE 2019; 232:356-365. [PMID: 31158630 DOI: 10.1016/j.chemosphere.2019.05.234] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2019] [Revised: 05/24/2019] [Accepted: 05/27/2019] [Indexed: 05/08/2023]
Abstract
Organic amendments (OA) have been applied in many mercury (Hg)-polluted paddy soils to meet increasing food demands with scarce land resources. However, little is known on the effects of different OAs on Hg dissolution and the composition of dissolved organic matter (DOM) in soil pore waters, both of which may be associated with Hg mobility. Consequently, DOM composition and Hg release levels were investigated in soil pore waters after applying food waste compost (FC), fulvic acids (FA) and humic acids (HA) to Hg-polluted paddy soils. FA and HA treatments promoted increased abundances of humic- and fulvic-like substances in pore water DOM while FC amendment increased soluble microbial by-products. FA amendment and high levels of both HA and FC amendments greatly promoted Hg dissolution in pore waters that could be attributed to the complexation of Hg with different DOM components. However, among all DOM components, only UVA fulvic and visible humic-like substances were positively correlated with Hg release levels and total organic carbon. These results indicate that discrepant DOM compositions are induced by different OA. Further, these differences may be associated with differential Hg dissolution in pore waters. Consequently, FA amendment and high level of FC or HA amendments should be limited to reduce potential Hg release into pore waters.
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Affiliation(s)
- Meng Li
- Key Laboratory of Environmental Criterial and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Marios Drosos
- Institute of Resource, Ecosystem and Environment of Agriculture, Faculty of Biology and Environment, Nanjing Agricultural University, 1 Weigang Road, Nanjing, 210095, China
| | - Hualing Hu
- Key Laboratory of Environmental Criterial and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China; College of Environmental Sciences and Engineering, Tianjin University, Tianjin, 300350, China
| | - Xiaosong He
- Key Laboratory of Environmental Criterial and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Guoxi Wang
- Sino-Danish College, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Hui Zhang
- Key Laboratory of Environmental Criterial and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China
| | - Zhengyi Hu
- Sino-Danish College, University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Beidou Xi
- Key Laboratory of Environmental Criterial and Risk Assessment, Chinese Research Academy of Environmental Sciences, Beijing, 100012, China.
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Yu M, Bouley BS, Xie D, Que EL. Highly fluorinated metal complexes as dual 19F and PARACEST imaging agents. Dalton Trans 2019; 48:9337-9341. [PMID: 31168527 PMCID: PMC6626988 DOI: 10.1039/c9dt01852b] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We reported a set of water-soluble transition metal complexes that can serve as both 19F and PARACEST magnetic resonance imaging agents. The high number of equivalent fluorine atoms and the paramagnetic effect of metals offer these complexes high 19F sensitivity as demonstrated by in vitro19F MRI experiments. The complexes contain carboxamide groups appended onto a cyclen macrocycle, which provide 1H CEST peaks well differentiated from bulk water. The Co(ii) agent displays two CEST peaks that can be utilized for ratiometric pH determination and the concept of combining 19F MR and PARACEST as complementary imaging techniques was demonstrated with the Fe(ii) complex.
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Affiliation(s)
- Meng Yu
- Department of Chemistry, The University of Texas at Austin, 105 E. 24th St Stop A5300, Austin, Texas 78712, USA.
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Markad D, Khullar S, Mandal SK. Novel primary amide-based cationic metal complexes: green synthesis, crystal structures, Hirshfeld surface analysis and solvent-free cyanosilylation reaction. Dalton Trans 2019; 48:3743-3757. [PMID: 30809608 DOI: 10.1039/c8dt04773a] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
A new symmetrical and flexible primary amide functionalized ligand, 2,2'-(ethane-1,2-diylbis((pyridin-2-ylmethyl)azanediyl))diacetamide (2-BPEG), has been synthesized and structurally characterized. Using this multidentate ligand, four novel metal complexes, namely [Cu(2-BPEG)](ClO4)2·0.5H2O (1), [Zn(2-BPEG)](ClO4)2 (2), [Zn(2-BPEG)](ZnCl4)·H2O (3) and [Cd(2-BPEG)(H2O)](ClO4)2·H2O (4), have been synthesized under ambient conditions and characterized by elemental, spectroscopic and thermal analysis, and single and powder X-ray diffraction. Complexes 1-3 are hexacoordinated with an N4O2 donor set (provided by the hexadentate 2-BPEG ligand), while complex 4 is heptacoordinated with an additional coordinated water molecule. In all cases, the 2-BPEG ligand acts as a hexadentate ligand. A change in the starting metal salt has resulted in the formation of 2 and 3 with different tetrahedral anions, ClO4- and ZnCl4-, respectively. This has provided an opportunity to showcase anion-directed supramolecular networks for these compounds. Compounds 1, 2 and 4 with perchlorate anions show similar and comparable intermolecular interactions in their 3D networks. On the other hand, the supramolecular self-assembly of 3 is dominated by a variety of intermolecular interactions such as C-HCl, N-HCl, O-HCl and C-HO due to the presence of a tetrachlorozincate(ii) ion. Moreover, the role of weak intermolecular interactions in the crystal packing has been analysed and quantified using Hirshfeld surface analysis. Furthermore, compound 4 exhibiting an open Lewis acid site has been found to be a very efficient and recyclable heterogeneous catalyst for the solvent-free cyanosilylation of various aldehydes with trimethylsilyl cyanide (TMSCN) producing the corresponding trimethylsilyl ether in high yields.
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Affiliation(s)
- Datta Markad
- Department of Chemical Sciences, Indian Institute of Science Education and Research Mohali, Sector 81, Manauli PO, S.A.S. Nagar, Mohali, Punjab 140306, India.
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Saikia G, Ahmed K, Gogoi SR, Sharma M, Talukdar H, Islam NS. A chitosan supported peroxidovanadium(V) complex: Synthesis, characterization and application as an eco-compatible heterogeneous catalyst for selective sulfoxidation in water. Polyhedron 2019. [DOI: 10.1016/j.poly.2018.11.028] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
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8
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Tsebrikova GS, Polyakova IN, Solov'ev VP, Ivanova IS, Kalashnikova IP, Kodina GE, Baulin VE, Tsivadze AY. Complexation of the new tetrakis[methyl(diphenylphosphorylated)] cyclen derivative with transition metals: First examples of octacoordinate zinc(II) and cobalt(II) complexes with cyclen molecules. Inorganica Chim Acta 2018. [DOI: 10.1016/j.ica.2018.04.007] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
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Abozeid SM, Snyder EM, Lopez AP, Steuerwald CM, Sylvester E, Ibrahim KM, Zaky RR, Abou‐El‐Nadar HM, Morrow JR. Nickel(II) Complexes as Paramagnetic Shift and paraCEST Agents. Eur J Inorg Chem 2018. [DOI: 10.1002/ejic.201800021] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
Affiliation(s)
- Samira M. Abozeid
- University at Buffalo, State University of New York Department of Chemistry 526 Natural Sciences Complex 14260 Amherst NY USA
- Department of Chemistry Faculty of Science Mansoura University El‐Gomhoria Street 35516 Mansoura Egypt
| | - Eric M. Snyder
- University at Buffalo, State University of New York Department of Chemistry 526 Natural Sciences Complex 14260 Amherst NY USA
| | - Alejandra P. Lopez
- University at Buffalo, State University of New York Department of Chemistry 526 Natural Sciences Complex 14260 Amherst NY USA
| | - Charles M. Steuerwald
- University at Buffalo, State University of New York Department of Chemistry 526 Natural Sciences Complex 14260 Amherst NY USA
| | - Eric Sylvester
- University at Buffalo, State University of New York Department of Chemistry 526 Natural Sciences Complex 14260 Amherst NY USA
| | - Kamal M. Ibrahim
- Department of Chemistry Faculty of Science Mansoura University El‐Gomhoria Street 35516 Mansoura Egypt
| | - Rania R. Zaky
- Department of Chemistry Faculty of Science Mansoura University El‐Gomhoria Street 35516 Mansoura Egypt
| | - Hamed M. Abou‐El‐Nadar
- Department of Chemistry Faculty of Science Mansoura University El‐Gomhoria Street 35516 Mansoura Egypt
| | - Janet R. Morrow
- University at Buffalo, State University of New York Department of Chemistry 526 Natural Sciences Complex 14260 Amherst NY USA
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A quantum chemistry evaluation of the stereochemical activity of the lone pair in PbII complexes with sequestering ligands. J Mol Model 2017; 23:24. [DOI: 10.1007/s00894-016-3190-y] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2016] [Accepted: 12/15/2016] [Indexed: 12/15/2022]
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