Mechanically linked supramolecular polymer architectures derived from macromolecular [2]rotaxanes: Synthesis and topology transformation

Lateral nanoarchitectonics from nano to life: ongoing challenges in interfacial chemical science

Lateral nanoarchitectonics is a method of precisely designing functional materials from atoms, molecules, and nanomaterials (so-called nanounits) in two-dimensional (2D) space using knowledge of nanotechnology. Similar strategies can be seen in biological systems; in particular, biological membranes ingeniously arrange and organise functional units within a single layer of units to create powerful systems for photosynthesis or signal transduction and others. When our major lateral nanoarchitectural approaches such as layer-by-layer (LbL) assembly and Langmuir-Blodgett (LB) films are compared with biological membranes, one finds that lateral nanoarchitectonics has potential to become a powerful tool for designing advanced functional nanoscale systems; however, it is still rather not well-developed with a great deal of unexplored possibilities. Based on such a discussion, this review article examines the current status of lateral nanoarchitectonics from the perspective of in-plane functional structure organisation at different scales. These include the extension of functions at the molecular level by on-surface synthesis, monolayers at the air-water interface, 2D molecular patterning, supramolecular polymers, macroscopic manipulation and functionality of molecular machines, among others. In many systems, we have found that while the targets are very attractive, the research is still in its infancy, and many challenges remain. Therefore, it is important to look at the big picture from different perspectives in such a comprehensive review. This review article will provide such an opportunity and help us set a direction for lateral nanotechnology toward more advanced functional organization.

Non-threaded and rotaxane-type threaded wheel-axle assemblies consisting of dinickel(II) metallomacrocycle and dibenzylammonium axle

Rotaxanes are typically prepared using covalent bonds to trap a wheel component onto an axle molecule, and rotaxane-type wheel-axle assembly using only noncovalent interactions has been far less explored. Here we show that a dinickel(II) metallomacrocycle forms two different types of wheel-axle assemblies with a dibenzylammonium axle molecule based only on noncovalent interactions. The non-threaded assembly was obtained by introduction of Ni2+ into the macrocycle before the complexation with the axle molecule (metal-first method). The non-threaded assembly was in rapid equilibrium with each of the components in solution. The threaded assembly was obtained by introduction of Ni2+ after the formation of a pseudorotaxane from the non-metalated wheel and the axle molecule (axle-first method). The threaded assembly was not in equilibrium with the dissociated species even though it was maintained only by noncovalent interactions. Thus, formation of one of the non-threaded and threaded wheel-axle assemblies over the other is governed by the assembly pathway.

Novel Insight into the Photophysical Properties and 2D Supramolecular Organization of Poly(3,4-ethylenedioxythiophene)/Permodified Cyclodextrins Polyrotaxanes at the Air-Water Interface

Two poly(3,4-ethylenedioxythiophene) polyrotaxanes (PEDOT∙TMe-βCD and PEDOT∙TMe-γCD) end-capped by pyrene (Py) were synthesized by oxidative polymerization of EDOT encapsulated into TMe-βCD or TMe-γCD cavities with iron (III) chloride (FeCl₃) in water and chemically characterized. The effect of TMe-βCD or TMe-γCD encapsulation of PEDOT backbones on the molecular weight, thermal stability, and solubility were investigated in depth. UV-vis absorption, fluorescence (F_L), phosphorescence (P_H), quantum efficiencies, and lifetimes in water and acetonitrile were also explored, together with their surface morphology and electrical properties. Furthermore, dynamic light scattering was used to study the hydrodynamic diameter (DH) and z-potential (ZP-ζ) of the water soluble fractions of PEDOT∙TMe-βCD and PEDOT∙TMe-γCD. PEDOT∙TMe-βCD and PEDOT∙TMe-γCD exhibited a sharp monodisperse peak with a DH of 55 ± 15 nm and 122 ± 32 nm, respectively. The ZP-ζ value decreased from -31.23 mV for PEDOT∙TMe-βCD to -20.38 mV for PEDOT∙TMe-γCD, indicating that a negatively charged layer covers their surfaces. Surface pressure-area isotherms and Brewster angle microscopy (BAM) studies revealed the capability of the investigated compounds to organize into sizeable and homogeneous 2D supramolecular assemblies at the air-water interface. The control of the 2D monolayer organization through the thermodynamic parameters of PEDOT∙TMe-βCD and PEDOT∙TMe-γCD suggests potential for a wide range of optoelectronic applications.

Mechanically interlocked polymers based on rotaxanes

The nature of mechanically interlocked molecules (MIMs) has continued to encourage researchers to design and construct a variety of high-performance materials. Introducing mechanically interlocked structures into polymers has led to novel polymeric materials, called mechanically interlocked polymers (MIPs). Rotaxane-based MIPs are an important class, where the mechanically interlocked characteristic retains a high degree of structural freedom and mobility of their components, such as the rotation and sliding motions of rotaxane units. Therefore, these MIP materials are known to possess a unique set of properties, including mechanical robustness, adaptability and responsiveness, which endow them with potential applications in many emerging fields, such as protective materials, intelligent actuators, and mechanisorption. In this review, we outline the synthetic strategies, structure-property relationships, and application explorations of various polyrotaxanes, including linear polyrotaxanes, polyrotaxane networks, and rotaxane dendrimers.

Copper-doped functionalized β-cyclodextrin as an efficient green nanocatalyst for synthesis of 1,2,3-triazoles in water

The synthesis of 1,2,3-triazoles with immobilized Cu(I) in thiosemicarbazide-functionalized β-cyclodextrin (Cu@TSC-β-CD) as a supramolecular catalyst was discussed. The catalyst was characterized by Fourier-transform infrared spectroscopy (FT-IR), thermogravimetric analysis (TGA), X-ray diffraction (XRD), scanning electron microscopy (SEM), energy-dispersive X-ray spectroscopy (EDS), and Inductively Coupled Plasma Optical Emission Spectroscopy (ICP-OES) measurements. The catalyst showed high activity (up to 95% yields of triazole products under optimized reaction conditions), providing a one-pot, atom-economic, and highly regioselective green method for 1,2,3-triazoles synthesis in an azide-alkyne cycloaddition (AAC) protocol in water. High stability and no appreciable leaching of Cu(I) were observed, owing to its strong binding via the coordination with thiosemicarbazide functionality.

Topology-transformable block copolymers based on a rotaxane structure: change in bulk properties with same composition

The topology of polymers affects their characteristic features, i.e., their microscopic structure and macroscopic properties. However, the topology of a polymer is usually fixed during the construction of the polymer chain and cannot be transformed after its determination during the synthesis. In this study, topology-transformable block copolymers that are connected via rotaxane linkages are introduced. We will present systems in which the topology transformation of block copolymers changes their 1) microphase-separated structures and 2) macroscopic mechanical properties. The combination of a rotaxane structure at the junction point and block copolymers that spontaneously form microphase-separated structures in the bulk provides access to systems that cannot be attained using conventional covalent bonds.

Topoly: Python package to analyze topology of polymers

The increasing role of topology in (bio)physical properties of matter creates a need for an efficient method of detecting the topology of a (bio)polymer. However, the existing tools allow one to classify only the simplest knots and cannot be used in automated sample analysis. To answer this need, we created the Topoly Python package. This package enables the distinguishing of knots, slipknots, links and spatial graphs through the calculation of different topological polynomial invariants. It also enables one to create the minimal spanning surface on a given loop, e.g. to detect a lasso motif or to generate random closed polymers. It is capable of reading various file formats, including PDB. The extensive documentation along with test cases and the simplicity of the Python programming language make it a very simple to use yet powerful tool, suitable even for inexperienced users. Topoly can be obtained from https://topoly.cent.uw.edu.pl.

Reversible cyclic-linear topological transformation using a long-range rotaxane switch

A reversible linear-cyclic topological transformation of polymers facilitated by a long-range rotaxane switch.

Switchable Polymer Materials Controlled by Rotaxane Macromolecular Switches

The synthesis and dynamic nature of macromolecular systems controlled by rotaxane macromolecular switches are introduced to discuss the significance of rotaxane linking of polymer chains and its topological switching. Macromolecular switches have been synthesized from macromolecular [2]rotaxanes (M2Rs) using sec-ammonium salt/crown ether couples. The successful synthesis of M2Rs possessing a single polymer axle and one crown ether wheel, constituting a key component of the macromolecular switch, has allowed us to develop various unique applications such as the development of topology-transformable polymers. Polymer topological transformations (e.g., linear-star and linear-cyclic) are achieved using rotaxane-linked polymers and rotaxane macromolecular switches. The pronounced dynamic nature of these polymer systems is sufficiently interesting to design sophisticated stimuli-responsive molecules, polymers, and materials.

Phase Transition Behaviors and Nanoscale Film Morphologies of Poly(δ-valerolactone) Axles Bearing Movable and Fixed Rotaxane Wheels

In this study, poly(δ-valerolactone) (PVL) axles bearing movable and fixed dibenzo-24-crown-8-ether wheels (rot-M and rot-F) are investigated for the first time in the terms of phase transition and nanoscale film morphology: PVL-rot-M and PVL-rot-F. Interestingly, the PVL axles reveal a strong tendency to form a horizontal lamellar structure with three different rotational crystal lattice domains in nanoscale films. The morphological structural parameters are discernibly varied by the movable and fixed rotaxane wheels. In particular, the rot-M wheel tends to be populated in both the interfacial and amorphous layers. The rot-M wheel is found to significantly influence the phase transition characteristics of the PVL axle because of its movability along the polymer backbone chain. In contrast, the rot-F wheel tends to be more localized in the interfacial layer rather than in the amorphous layer because of its immovability constrained at the polymer chain end. The rot-F wheel causes severe thermal instability in the PVL axle, which can be attributed mainly to the presence of its counter anion (PF₆ ^- ).

Which One is Bulkier: The 3,5-Dimethylphenyl or the 2,6-Dimethylphenyl Group? Development of Size-Complementary Molecular and Macromolecular [2]Rotaxanes

We developed novel size-complementary molecular and macromolecular rotaxanes using a 2,6-dimethylphenyl terminal group as the axle-end-cap group in dibenzo-24-crown-8-ether (DB24C8)-based rotaxanes, where the 2,6-dimethylphenyl group was found to be less bulky than the 3,5-dimethylphenyl group. A series of molecular and macromolecular [2]rotaxanes that bear a 2,6-dimethylphenyl group as the axle-end-cap were synthesized using unsubstituted and fluorine-substituted DB24C8. Base-induced decomposition into their constituent components confirmed the occurrence of deslipping, which supports the size-complementarity of these rotaxanes. The deslipping rate was independent of the axle length but dependent on the DB24C8 substituents. A kinetic study indicated the rate-determining step was that in which the wheel is getting over the end-cap group, and deslipping proceeded via a hopping-over mechanism. Finally, the present deslipping behavior was applied to a stimulus-degradable polymer as an example for the versatile utility of this concept in the context of stimulus-responsive materials.

How Secondary and Tertiary Amide Moieties are Molecular Stations for Dibenzo-24-crown-8 in [2]Rotaxane Molecular Shuttles?

Interlocked molecular machines like [2]rotaxanes are intriguing aesthetic molecules. The control of the localization of the macrocycle, which surrounds a molecular axle, along the thread leads to translational isomers of very different properties. Although many moieties have been used as sites of interactions for crown ethers, the very straightforwardly obtained amide motif has more rarely been envisaged as molecular station. In this article, we report the use of secondary and tertiary amide moieties as efficient secondary molecular station in pH-sensitive molecular shuttles. Depending on the N-substitution of the amide station, and on deprotonation or deprotonation-carbamoylation, the actuation of the molecular machinery differs accordingly to very distinct interactions between the axle and the DB24C8.