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Șerban MV, Nazarie (Ignat) SR, Dinescu S, Radu IC, Zaharia C, Istrătoiu EA, Tănasă E, Herman H, Gharbia S, Baltă C, Hermenean A, Costache M. Silk ProteinsEnriched Nanocomposite Hydrogels Based on Modified MMT Clay and Poly(2-hydroxyethyl methacrylate-co-2-acrylamido-2-methylpropane Sulfonic Acid) Display Favorable Properties for Soft Tissue Engineering. NANOMATERIALS 2022; 12:nano12030503. [PMID: 35159848 PMCID: PMC8839072 DOI: 10.3390/nano12030503] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/24/2021] [Revised: 01/25/2022] [Accepted: 01/27/2022] [Indexed: 02/01/2023]
Abstract
Due to their remarkable structures and properties, three-dimensional hydrogels and nanostructured clay particles have been extensively studied and have shown a high potential for tissue engineering as solutions for tissue defects. In this study, four types of 2-hydroxyethyl methacrylate/2-acrylamido-2-methylpropane sulfonic acid/montmorillonite (HEMA/AMPSA/MMT) hydrogels enriched with sericin, and fibroin were prepared and studied in the context of regenerative medicine for soft tissue regenerative medicine. Our aim was to obtain crosslinked hydrogel structures using modified montmorillonite clay as a crosslinking agent. In order to improve the in vitro and in vivo biocompatibility, silk proteins were further incorporated within the hydrogel matrix. Fourier transform infrared spectroscopy with attenuated total reflectance (FTIR-ATR) were performed to prove the chemical structures of the modified MMT and nanocomposite hydrogels. Swelling and rheological measurements showed the good elastic behavior of the hydrogels due to this unique network structure in which modified MMT acts as a crosslinking agent. Hydrogel biocompatibility was assessed by MTT, LDH and LIVE/DEAD assays. The hydrogels were evaluated for their potential to support adipogenesis in vitro and human stem cells isolated from adipose tissue were seeded in them and induced to differentiate. The progress was assessed by evaluation of expression of adipogenic markers (ppar-γ2, perilipin) evaluated by qPCR. The potential of the materials to support tissue regeneration was further evaluated on animal models in vivo. All materials proved to be biocompatible, with better results on the 95% HEMA 5% AMPSA enriched with sericin and fibroin material. This composition promoted a better development of adipogenesis compared to the other compositions studied, due the addition of sericin and fibroin. The results were confirmed in vivo as well, with a better progress of soft tissue regeneration after implantation in mice. Therefore, hydrogel 95% HEMA 5% AMPSA enriched with sericin as well as fibroin showed the best results that recommend it for future soft tissue engineering application.
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Affiliation(s)
- Mirela Violeta Șerban
- Department of Biochemistry and Molecular Biology, University of Bucharest, 050663 Bucharest, Romania; (M.V.Ș.); (S.-R.N.); (M.C.)
| | - Simona-Rebeca Nazarie (Ignat)
- Department of Biochemistry and Molecular Biology, University of Bucharest, 050663 Bucharest, Romania; (M.V.Ș.); (S.-R.N.); (M.C.)
| | - Sorina Dinescu
- Department of Biochemistry and Molecular Biology, University of Bucharest, 050663 Bucharest, Romania; (M.V.Ș.); (S.-R.N.); (M.C.)
- The Research Institute of the University of Bucharest (ICUB), University of Bucharest, 050663 Bucharest, Romania
- Correspondence: (S.D.); (A.H.)
| | - Ionuț-Cristian Radu
- Advanced Polymer Materials Group, University Politehnica of Bucharest, 011061 Bucharest, Romania; (I.-C.R.); (C.Z.); (E.-A.I.); (E.T.)
| | - Cătălin Zaharia
- Advanced Polymer Materials Group, University Politehnica of Bucharest, 011061 Bucharest, Romania; (I.-C.R.); (C.Z.); (E.-A.I.); (E.T.)
| | - Elena-Alexandra Istrătoiu
- Advanced Polymer Materials Group, University Politehnica of Bucharest, 011061 Bucharest, Romania; (I.-C.R.); (C.Z.); (E.-A.I.); (E.T.)
| | - Eugenia Tănasă
- Advanced Polymer Materials Group, University Politehnica of Bucharest, 011061 Bucharest, Romania; (I.-C.R.); (C.Z.); (E.-A.I.); (E.T.)
| | - Hildegard Herman
- “Aurel Ardelean” Institute of Life Sciences, ”Vasile Goldiș” Western University of Arad, 310025 Arad, Romania; (H.H.); (S.G.); (C.B.)
| | - Sami Gharbia
- “Aurel Ardelean” Institute of Life Sciences, ”Vasile Goldiș” Western University of Arad, 310025 Arad, Romania; (H.H.); (S.G.); (C.B.)
| | - Cornel Baltă
- “Aurel Ardelean” Institute of Life Sciences, ”Vasile Goldiș” Western University of Arad, 310025 Arad, Romania; (H.H.); (S.G.); (C.B.)
| | - Anca Hermenean
- “Aurel Ardelean” Institute of Life Sciences, ”Vasile Goldiș” Western University of Arad, 310025 Arad, Romania; (H.H.); (S.G.); (C.B.)
- Correspondence: (S.D.); (A.H.)
| | - Marieta Costache
- Department of Biochemistry and Molecular Biology, University of Bucharest, 050663 Bucharest, Romania; (M.V.Ș.); (S.-R.N.); (M.C.)
- The Research Institute of the University of Bucharest (ICUB), University of Bucharest, 050663 Bucharest, Romania
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2
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Omonov TS, Patel V, Curtis JM. The Development of Epoxidized Hemp Oil Prepolymers for the Preparation of Thermoset Networks. J AM OIL CHEM SOC 2019. [DOI: 10.1002/aocs.12290] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/08/2023]
Affiliation(s)
- Tolibjon S. Omonov
- Lipid Chemistry Group (LCG), Department of Agricultural, Food and Nutritional Science (AFNS)University of Alberta, 3‐60D South Academic Building (SAB) Edmonton Alberta T6G 2P5 Canada
| | - Vinay Patel
- Lipid Chemistry Group (LCG), Department of Agricultural, Food and Nutritional Science (AFNS)University of Alberta, 3‐60D South Academic Building (SAB) Edmonton Alberta T6G 2P5 Canada
| | - Jonathan M. Curtis
- Lipid Chemistry Group (LCG), Department of Agricultural, Food and Nutritional Science (AFNS)University of Alberta, 3‐60D South Academic Building (SAB) Edmonton Alberta T6G 2P5 Canada
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3
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Kucuk I, Kaya Y, Kaya AA. Structural, spectroscopic (FT-IR, NMR, UV–visible), nonlinear optical (NLO), cytotoxic and molecular docking studies of 4-nitro-isonitrosoacetophenone (ninapH) by DFT method. J Mol Struct 2017. [DOI: 10.1016/j.molstruc.2017.03.032] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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4
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Viana RB, Ribeiro GL, Valencia LJ, Varela JJ, Viana AB, da Silva AB, Moreno-Fuquen R. Vibrational spectroscopy, intramolecular CH⋯O interaction and conformational analysis of 2,5-dimethyl-benzyl benzoate. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.07.041] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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5
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Theoretical and experimental investigations on molecular structure of 7-Chloro-9-phenyl-2,3-dihydroacridin-4(1H)-one with cytotoxic studies. J Mol Struct 2016. [DOI: 10.1016/j.molstruc.2016.01.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
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6
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Panicker CY, Varghese HT, Narayana B, Divya K, Sarojini BK, War JA, Van Alsenoy C, Fun HK. FT-IR, NBO, HOMO-LUMO, MEP analysis and molecular docking study of Methyl N-({[2-(2-methoxyacetamido)-4-(phenylsulfanyl)phenyl]amino}[(methoxycarbonyl) imino]methyl)carbamate. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 148:29-42. [PMID: 25863457 DOI: 10.1016/j.saa.2015.03.064] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/24/2014] [Revised: 01/25/2015] [Accepted: 03/05/2015] [Indexed: 06/04/2023]
Abstract
The optimized molecular structure, vibrational frequencies, corresponding vibrational assignments of Methyl N-({[2-(2-methoxyacetamido)-4-(phenylsulfanyl) phenyl]amino} [(methoxycarbonyl)imino]methyl)carbamate have been investigated using HF and DFT levels of calculations. The geometrical parameters are in agreement with XRD data. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The HOMO and LUMO analysis is used to determine the charge transfer within the molecule. Molecular electrostatic potential study was also performed. The first and second hyperpolarizability was calculated in order to find its role in nonlinear optics. Molecular docking studies are also reported. Prediction of Activity Spectra analysis of the title compound predicts anthelmintic and antiparasitic activity as the most probable activity with Pa (probability to be active) value of 0.808 and 0.797, respectively. Molecular docking studies show that both the phenyl groups and the carbonyl oxygens of the molecule are crucial for bonding and these results draw us to the conclusion that the compound might exhibit pteridine reductase inhibitory activity.
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Affiliation(s)
- C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | | | - B Narayana
- Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
| | - K Divya
- Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
| | - B K Sarojini
- Industrial Chemistry Division, Department of Studies in Chemistry, Mangalore University, Manglagangotri, Karnataka, India
| | - Javeed Ahmad War
- Department of Chemistry, Dr.H.S.Gour Central University, Sagar, M.P., India
| | - C Van Alsenoy
- University of Antwerp, Chemistry Department, Universiteitsplein 1, B2610 Antwerp, Belgium
| | - H K Fun
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, Penang 11800, Malaysia; Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, PO Box 2457, Riyadh 11451, Saudi Arabia
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7
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Mary YS, Panicker CY, Thiemann T, Al-Azani M, Al-Saadi AA, Van Alsenoy C, Raju K, War JA, Srivastava SK. Molecular conformational analysis, vibrational spectra, NBO, NLO analysis and molecular docking study of bis[(E)-anthranyl-9-acrylic]anhydride based on density functional theory calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 151:350-359. [PMID: 26143327 DOI: 10.1016/j.saa.2015.06.075] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2014] [Revised: 06/21/2015] [Accepted: 06/22/2015] [Indexed: 06/04/2023]
Abstract
FT-IR and FT-Raman spectra of bis[(E)-anthranyl-9-acrylic]anhydride were recorded and analyzed. The conformational behavior is also investigated. The vibrational wave numbers were calculated using density functional theory (DFT) quantum chemical calculations. The data obtained from wave number calculations are used to assign vibrational bands obtained in Infrared and Raman spectra. Potential energy distribution was done using GAR2PED program. The geometrical parameters are compared with related structures. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using Natural Bonding Orbital (NBO) analysis. The Highest Occupied Molecular Orbital (HOMO) and Lowest Unoccupied Molecular Orbital (LUMO) analysis are used to determine the charge transfer within the molecule. Molecular Electrostatic Potential (MEP) was performed by the DFT method. The calculated first hyperpolarizability of the title compound is comparable with the reported values of similar derivatives and is 4.23 times that of the standard nonlinear optical (NLO) material urea and the title compound and its derivatives are an attractive object for future studies of nonlinear optical properties. To evaluate the in silico antitumor activity of the title compound molecular docking studies were carried out against protein Bcl-xL. The (1)H-NMR spectrum is also reported.
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Affiliation(s)
- Y Sheena Mary
- Department of Physics, Fatima Mata National College, Kollam, Kerala, India
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | - Thies Thiemann
- Department of Chemistry, Faculty of Science, United Arab Emirates University, Al Ain, Abu Dhabi, United Arab Emirates
| | - Mariam Al-Azani
- Department of Chemistry, Faculty of Science, United Arab Emirates University, Al Ain, Abu Dhabi, United Arab Emirates
| | - Abdulaziz A Al-Saadi
- Department of Chemistry, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - C Van Alsenoy
- Department of Chemistry, University of Antwerp, B2610 Antwerp, Belgium
| | - K Raju
- Department of Physics, University College, Trivandrum, Kerala, India
| | - Javeed Ahmad War
- Synthetic Organic Chemistry Laboratory, HSG University, Sagar, M.P., India
| | - S K Srivastava
- Synthetic Organic Chemistry Laboratory, HSG University, Sagar, M.P., India
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8
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Fazal E, Panicker CY, Varghese HT, Nagarajan S, Sudha BS, War JA, Srivastava SK, Harikumar B, Anto PL. Spectroscopic investigation (FT-IR, FT-Raman), HOMO-LUMO, NBO analysis and molecular docking study of 4-chlorophenyl quinoline-2-carboxylate. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 145:260-269. [PMID: 25791883 DOI: 10.1016/j.saa.2015.01.089] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2014] [Revised: 01/11/2015] [Accepted: 01/29/2015] [Indexed: 06/04/2023]
Abstract
FT-IR and FT-Raman spectra of 4-chlorophenyl quinoline-2-carboxylate were recorded and analyzed. The vibrational wavenumbers were computed using DFT quantum chemical calculations. The data obtained from wavenumber calculations are used to assign vibrational bands obtained experimentally. Potential energy distribution was done using GAR2PED program. The geometrical parameters obtained theoretically are in agreement with the XRD data. NBO analysis, HOMO-LUMO, first hyperpolarizability and molecular electrostatic potential results are also reported. The calculated hyperpolarizability of the title compound is 77.53 times that of the standard NLO material urea and the title compound and its derivatives are attractive object for future studies of nonlinear optical properties. Molecular docking results suggest that the compound might exhibit inhibitory activity against GPb.
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Affiliation(s)
- E Fazal
- Department of Chemistry, Yuvaraja's College, Mysore, India
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | | | - S Nagarajan
- Department of Spice and Flavour Science, CSIR Central Food Technology Research Institute, Mysore, India
| | - B S Sudha
- Department of Chemistry, Yuvaraja's College, Mysore, India
| | - Javeed Ahamad War
- Department of Chemistry, Dr. H.S. Gour Central University, Sagar, M.P. 470003, India
| | - S K Srivastava
- Department of Chemistry, Dr. H.S. Gour Central University, Sagar, M.P. 470003, India
| | - B Harikumar
- Department of Chemistry, TKM College of Arts and Science, Kollam, Kerala, India
| | - P L Anto
- Department of Physics, Christ College, Iringalakkuda, Thrissur, Kerala, India
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9
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Fazal E, Panicker CY, Varghese HT, Nagarajan S, Sudha BS, War JA, Srivastava SK, Harikumar B, Anto PL. Vibrational spectroscopic and molecular docking study of 4-Methylphenylquinoline-2-carboxylate. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2015; 143:213-222. [PMID: 25733248 DOI: 10.1016/j.saa.2015.01.028] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/23/2014] [Revised: 01/11/2015] [Accepted: 01/15/2015] [Indexed: 06/04/2023]
Abstract
FT-IR and FT-Raman spectra of 4-Methylphenylquinoline-2-carboxylate were recorded and analyzed. The structure of the molecule has been optimized and structural characteristics have been determined by density functional theory. The geometrical parameters (DFT) are in agreement with the XRD results. HOMO and LUMO and other chemical properties are reported. Nonlinear optical properties are also reported. A detailed molecular picture of the title compound and its interactions were obtained from NBO analysis. The negative (red and yellow) regions of the MEP are related to electrophilic reactivity and the positive (blue) regions to nucleophilic reactivity, as shown in the MEP plot and the carbonyl group and the phenyl rings are observed as electrophilic. PASS analysis predicts that the 4-Methylphenylquinoline-2-carboxylate might exhibit anti-diabetic activity. Molecular docking results suggest that the compound might exhibit inhibitory activity against GPb.
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Affiliation(s)
- E Fazal
- Department of Chemistry, Yuvaraja's College, Mysore, India
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | | | - S Nagarajan
- Department of Spice and Flavour Science, CSIR-Central Food Technology Research Institute, Mysore, India
| | - B S Sudha
- Department of Chemistry, Yuvaraja's College, Mysore, India
| | - Javeed Ahamad War
- Department of Chemistry, Dr. H.S. Gour Central University, Sagar, M.P. 470003, India
| | - S K Srivastava
- Department of Chemistry, Dr. H.S. Gour Central University, Sagar, M.P. 470003, India
| | - B Harikumar
- Department of Chemistry, TKM College of Arts and Science, Kollam, Kerala, India
| | - P L Anto
- Department of Physics, Christ College, Iringalakkuda, Thrissur, Kerala, India
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10
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Najiya A, Panicker CY, Sapnakumari M, Narayana B, Sarojini BK, Van Alsenoy C. Molecular structure, FT-IR, first order hyperpolarizability, NBO analysis, HOMO and LUMO, MEP analysis of (E)-3-(4-chlorophenyl)-1-(4-fluorophenyl)prop-2-en-1-one by HF and density functional methods. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 133:526-533. [PMID: 24983921 DOI: 10.1016/j.saa.2014.06.049] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2014] [Revised: 05/17/2014] [Accepted: 06/03/2014] [Indexed: 06/03/2023]
Abstract
(E)-3-(4-Chlorophenyl)-1-(4-fluorophenyl)prop-2-en-1-one is synthesized by reacting 4-fluoroacetophenone and 4-chlorobenzaldehyde in ethanol in the presence of sodium hydroxide. The structure of the compound was confirmed by IR and single crystal X-ray diffraction studies. FT-IR spectrum of (E)-3-(4-chlorophenyl)-1-(4-fluorophenyl)prop-2-en-1-one was recorded and analyzed. The crystal structure is also described. The vibrational wavenumbers were calculated using HF and DFT methods and are assigned with the help of potential energy distribution method. The geometrical parameters of the title compound obtained from XRD studies are in agreement with the calculated (DFT) values. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The calculated first hyperpolarizability of the title compound is comparable with the reported values of similar derivatives and 63.85 times that of the standard NLO material urea. The HOMO-LUMO transition implies an electron density transfer from the chlorophenyl ring to the fluorophenyl ring. From the MEP analysis it is evident that the negative charge covers the CO group and the positive region is over the phenyl rings.
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Affiliation(s)
- A Najiya
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | - M Sapnakumari
- Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
| | - B Narayana
- Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
| | - B K Sarojini
- Industrial Chemistry-Division, Department of Studies in Chemistry, Mangalore University, Mangalagangotri, Karnataka, India
| | - C Van Alsenoy
- Department of Chemistry, University of Antwerp, B2610 Antwerp, Belgium
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11
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Mary YS, Raju K, Panicker CY, Al-Saadi AA, Thiemann T. Molecular conformational analysis, vibrational spectra, NBO analysis and first hyperpolarizability of (2E)-3-(3-chlorophenyl)prop-2-enoic anhydride based on density functional theory calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 131:471-483. [PMID: 24840488 DOI: 10.1016/j.saa.2014.04.111] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2014] [Revised: 04/11/2014] [Accepted: 04/22/2014] [Indexed: 06/03/2023]
Abstract
The conformational behavior and structural stability of (2E)-3-(3-chlorophenyl)prop-2-enoic anhydride were investigated by using density functional theory. The optimized molecular structure, vibrational wavenumbers, corresponding vibrational assignments of (2E)-3-(3-chlorophenyl)prop-2-enoic anhydride have been investigated experimentally and theoretically. The HOMO and LUMO analysis are used to determine the charge transfer within the molecule. The stability of the molecule arising from hyperconjugative interaction and charge delocalization has been analyzed using NBO analysis. The calculated first hyperpolarizability of the title compound is 15.8×10(-30)esu, and is 121.54 times that of the standard NLO material urea and the title compound is an attractive object for future studies of nonlinear optical properties. MEP was performed by the DFT method and the predicted infrared intensities and Raman activities have also been reported.
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Affiliation(s)
- Y Sheena Mary
- Department of Physics, Fatima Mata National College, Kollam, Kerala, India; Department of Physics, University College, Trivandrum, Kerala, India
| | - K Raju
- Department of Physics, University College, Trivandrum, Kerala, India
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | - Abdulaziz A Al-Saadi
- Department of Chemistry, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Thies Thiemann
- Graduate School of Interdisciplinary Engineering Sciences, Kyushu University, Fukuoka, Japan; United Arab Emirates University, Al Ain, United Arab Emirates
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12
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Chidan Kumar CS, Panicker CY, Fun HK, Mary YS, Harikumar B, Chandraju S, Quah CK, Ooi CW. Molecular structure, FT-IR, first order hyperpolarizability, NBO analysis, HOMO and LUMO analysis of 2-(4-chlorophenyl)-2-oxoethyl 3-methylbenzoate by HF and density functional methods. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 128:327-336. [PMID: 24691363 DOI: 10.1016/j.saa.2014.02.185] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2013] [Revised: 02/23/2014] [Accepted: 02/25/2014] [Indexed: 06/03/2023]
Abstract
2-(4-Chlorophenyl)-2-oxoethyl 3-methylbenzoate is synthesized by reacting 4-chlorophenacyl bromide with 2-methylbenzoic acid using a slight excess of potassium or sodium carbonate in DMF medium at room temperature. The structure of the compound was confirmed by IR and single-crystal X-ray diffraction studies. FT-IR spectrum of 2-(4-chlorophenyl)-2-oxoethyl-3-nitrobenzoate was recorded and analyzed. The crystal structure is also described. The vibrational wavenumbers were computed using HF and DFT methods and are assigned with the help of potential energy distribution method. The first hyperpolarizability and infrared intensities are also reported. The geometrical parameters of the title compound obtained from XRD studies are in agreement with the calculated (DFT) values. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The HOMO and LUMO analysis are used to determine the charge transfer within the molecule. MEP was performed by the DFT method.
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Affiliation(s)
- C S Chidan Kumar
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | - Hoong-Kun Fun
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia; Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia.
| | - Y Sheena Mary
- Department of Physics, Fatima Mata National College, Kollam, Kerala, India
| | - B Harikumar
- Department of Chemistry, TKM College of Arts and Science, Kollam, Kerala, India
| | - S Chandraju
- Department of Sugar Technology and Chemistry, Sir M. Visvesvaraya PG Center, University of Mysore, Tubinakere, Mandya 571402, India
| | - Ching Kheng Quah
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
| | - Chin Wei Ooi
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
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13
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Sheena Mary Y, Raju K, Panicker CY, Al-Saadi AA, Thiemann T, Van Alsenoy C. Molecular conformational analysis, vibrational spectra, NBO analysis and first hyperpolarizability of (2E)-3-phenylprop-2-enoic anhydride based on density functional theory calculations. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 128:638-646. [PMID: 24704480 DOI: 10.1016/j.saa.2014.02.194] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/23/2013] [Revised: 02/24/2014] [Accepted: 02/25/2014] [Indexed: 06/03/2023]
Abstract
The conformational behavior and structural stability of (2E)-3-phenylprop-2-enoic anhydride were investigated by using density functional theory. Seventeen possible stable conformations of the title compound were determined and verified with their calculated vibrational frequencies being all positive. The optimized molecular structure, vibrational wavenumbers, corresponding vibrational assignments of (2E)-3-phenylprop-2-enoic anhydride have been investigated experimentally and theoretically using Gaussian09 software package. Potential energy distribution of normal modes vibrations was done using GAR2PED program. The HOMO and LUMO analysis are used to determine the charge transfer within the molecule. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The calculated first hyperpolarizability of the title compound is 12×10(-30) esu and is 92.31 times that of the standard NLO material urea and the title compound is an attractive object for future studies of nonlinear optical properties. MEP was performed by the DFT method and the predicted infrared intensities and Raman activities have also been reported.
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Affiliation(s)
- Y Sheena Mary
- Department of Physics, Fatima Mata National College, Kollam, Kerala, India; Department of Physics, University College, Trivandrum, Kerala, India
| | - K Raju
- Department of Physics, University College, Trivandrum, Kerala, India
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | - Abdulaziz A Al-Saadi
- Department of Chemistry, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia
| | - Thies Thiemann
- Graduate School of Interdisciplinary Engineering Sciences, Kyushu University, Fukuoka, Japan; United Arab Emirates University, Al Ain, United Arab Emirates
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14
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Chidan Kumar CS, Panicker CY, Fun HK, Mary YS, Harikumar B, Chandraju S, Quah CK, Ooi CW. FT-IR, molecular structure, first order hyperpolarizability, HOMO and LUMO analysis, MEP and NBO analysis of 2-(4-chlorophenyl)-2-oxoethyl 3-nitrobenzoate. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 126:208-219. [PMID: 24607470 DOI: 10.1016/j.saa.2014.01.145] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/25/2013] [Revised: 01/17/2014] [Accepted: 01/27/2014] [Indexed: 06/03/2023]
Abstract
2-(4-Chlorophenyl)-2-oxoethyl 3-nitrobenzoate is synthesized by reacting 4-chlorophenacyl bromide with 3-nitrobenzoic acid using a slight excess of potassium or sodium carbonate in DMF medium at room temperature. The structure of the compound was confirmed by IR and single-crystal X-ray diffraction studies. FT-IR spectrum of 2-(4-chlorophenyl)-2-oxoethyl 3-nitrobenzoate was recorded and analyzed. The crystal structure is also described. The vibrational wavenumbers were computed using HF and DFT methods and are assigned with the help of potential energy distribution method. The first hyperpolarizability and infrared intensities are also reported. The geometrical parameters of the title compound obtained from XRD studies are in agreement with the calculated (DFT) values. The stability of the molecule arising from hyper-conjugative interaction and charge delocalization has been analyzed using NBO analysis. The HOMO and LUMO analysis are used to determine the charge transfer within the molecule. MEP was performed by the DFT method.
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Affiliation(s)
- C S Chidan Kumar
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
| | - C Yohannan Panicker
- Department of Physics, TKM College of Arts and Science, Kollam, Kerala, India.
| | - Hoong-Kun Fun
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia; Department of Pharmaceutical Chemistry, College of Pharmacy, King Saud University, Riyadh 11451, Saudi Arabia.
| | - Y Sheena Mary
- Department of Physics, Fatima Mata National College, Kollam, Kerala, India
| | - B Harikumar
- Department of Chemistry, TKM College of Arts and Science, Kollam, Kerala, India
| | - S Chandraju
- Department of Sugar Technology and Chemistry, Sir M. Visvesvaraya PG Center, University of Mysore, Tubinakere, Mandya 571402, India
| | - Ching Kheng Quah
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
| | - Chin Wei Ooi
- X-ray Crystallography Unit, School of Physics, Universiti Sains Malaysia, 11800 USM, Penang, Malaysia
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15
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Sheikhshoaie I, Ebrahimipour SY, Sheikhshoaie M, Rudbari HA, Khaleghi M, Bruno G. Combined experimental and theoretical studies on the X-ray crystal structure, FT-IR, 1H NMR, 13C NMR, UV-Vis spectra, NLO behavior and antimicrobial activity of 2-hydroxyacetophenone benzoylhydrazone. SPECTROCHIMICA ACTA. PART A, MOLECULAR AND BIOMOLECULAR SPECTROSCOPY 2014; 124:548-555. [PMID: 24508893 DOI: 10.1016/j.saa.2014.01.043] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2013] [Revised: 12/25/2013] [Accepted: 01/08/2014] [Indexed: 06/03/2023]
Abstract
A Schiff base ligand, 2-hydroxyacetophenone benzoylhydrazone (HL) was synthesized and fully characterized with FT-IR, elemental analyses, UV-Vis, (1)H NMR and (13)C NMR spectra. DFT calculations using B3LYP/6-31+G(d,p) and PW91/DZP are performed to optimize the molecular geometry. Optimized structures are used to calculate FT-IR, UV-Vis, (1)H NMR and (13)C NMR spectra of the compound. Also the energies of the frontier molecular orbitals (FMOs) have been determined. The results obtained from the optimization and spectral analyses are in good agreement with the experimental data. To investigate non-linear optical properties, the electric dipole moment (μ), polarizability (α) and molecular first hyperpolarizability (β) were computed. The linear polarizabilities and first hyperpolarizabilities of the studied molecule indicate that the compound can be a good candidate of nonlinear optical materials. In addition, the minimal inhibitory concentration (MIC) of this compound against Staphylococcus aureus, and Candida albicans was determined.
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Affiliation(s)
- Iran Sheikhshoaie
- Department of Chemistry, Shahid Bahonar University of Kerman, Kerman 76169-14111, Iran.
| | - S Yousef Ebrahimipour
- Department of Chemistry, Shahid Bahonar University of Kerman, Kerman 76169-14111, Iran.
| | - Mahdeyeh Sheikhshoaie
- Department of Mining Engineering, Shahid Bahonar University of Kerman, Kerman 76169-14111, Iran
| | - Hadi Amiri Rudbari
- Faculty of Chemistry, University of Isfahan, Isfahan 81746-73441, Iran; Dipartimento di Scienze Chimiche, Università di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
| | - Moj Khaleghi
- Department of Biology, Shahid Bahonar University of Kerman, Kerman 76169-14111, Iran
| | - Giuseppe Bruno
- Dipartimento di Scienze Chimiche, Università di Messina, Viale F. Stagno d'Alcontres 31, 98166 Messina, Italy
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