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Alnaji L. Machine learning in epidemiology: Neural networks forecasting of monkeypox cases. PLoS One 2024; 19:e0300216. [PMID: 38691574 PMCID: PMC11062558 DOI: 10.1371/journal.pone.0300216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2023] [Accepted: 02/25/2024] [Indexed: 05/03/2024] Open
Abstract
This study integrates advanced machine learning techniques, namely Artificial Neural Networks, Long Short-Term Memory, and Gated Recurrent Unit models, to forecast monkeypox outbreaks in Canada, Spain, the USA, and Portugal. The research focuses on the effectiveness of these models in predicting the spread and severity of cases using data from June 3 to December 31, 2022, and evaluates them against test data from January 1 to February 7, 2023. The study highlights the potential of neural networks in epidemiology, especially concerning recent monkeypox outbreaks. It provides a comparative analysis of the models, emphasizing their capabilities in public health strategies. The research identifies optimal model configurations and underscores the efficiency of the Levenberg-Marquardt algorithm in training. The findings suggest that ANN models, particularly those with optimized Root Mean Squared Error, Mean Absolute Percentage Error, and the Coefficient of Determination values, are effective in infectious disease forecasting and can significantly enhance public health responses.
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Affiliation(s)
- Lulah Alnaji
- Department of Mathematics, University of Hafr Al-Batin, Hafr Al-Batin, Saudi Arabia
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Bianchi JRDO, de la Torre LG, Costa ALR. Droplet-Based Microfluidics as a Platform to Design Food-Grade Delivery Systems Based on the Entrapped Compound Type. Foods 2023; 12:3385. [PMID: 37761094 PMCID: PMC10527709 DOI: 10.3390/foods12183385] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2023] [Revised: 09/06/2023] [Accepted: 09/07/2023] [Indexed: 09/29/2023] Open
Abstract
Microfluidic technology has emerged as a powerful tool for several applications, including chemistry, physics, biology, and engineering. Due to the laminar regime, droplet-based microfluidics enable the development of diverse delivery systems based on food-grade emulsions, such as multiple emulsions, microgels, microcapsules, solid lipid microparticles, and giant liposomes. Additionally, by precisely manipulating fluids on the low-energy-demand micrometer scale, it becomes possible to control the size, shape, and dispersity of generated droplets, which makes microfluidic emulsification an excellent approach for tailoring delivery system properties based on the nature of the entrapped compounds. Thus, this review points out the most current advances in droplet-based microfluidic processes, which successfully use food-grade emulsions to develop simple and complex delivery systems. In this context, we summarized the principles of droplet-based microfluidics, introducing the most common microdevice geometries, the materials used in the manufacture, and the forces involved in the different droplet-generation processes into the microchannels. Subsequently, the encapsulated compound type, classified as lipophilic or hydrophilic functional compounds, was used as a starting point to present current advances in delivery systems using food-grade emulsions and their assembly using microfluidic technologies. Finally, we discuss the limitations and perspectives of scale-up in droplet-based microfluidic approaches, including the challenges that have limited the transition of microfluidic processes from the lab-scale to the industrial-scale.
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Affiliation(s)
- Jhonatan Rafael de Oliveira Bianchi
- Department of Materials and Bioprocess Engineering, School of Chemical Engineering, University of Campinas, Av. Albert Einstein, 500, Campinas 13083-852, Brazil; (J.R.d.O.B.); (L.G.d.l.T.)
| | - Lucimara Gaziola de la Torre
- Department of Materials and Bioprocess Engineering, School of Chemical Engineering, University of Campinas, Av. Albert Einstein, 500, Campinas 13083-852, Brazil; (J.R.d.O.B.); (L.G.d.l.T.)
| | - Ana Leticia Rodrigues Costa
- Department of Materials and Bioprocess Engineering, School of Chemical Engineering, University of Campinas, Av. Albert Einstein, 500, Campinas 13083-852, Brazil; (J.R.d.O.B.); (L.G.d.l.T.)
- Institute of Exact and Technological Sciences, Federal University of Viçosa (UFV), Campus Florestal, Florestal 35690-000, Brazil
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Long F, Guo Y, Zhang Z, Wang J, Ren Y, Cheng Y, Xu G. Recent Progress of Droplet Microfluidic Emulsification Based Synthesis of Functional Microparticles. GLOBAL CHALLENGES (HOBOKEN, NJ) 2023; 7:2300063. [PMID: 37745820 PMCID: PMC10517312 DOI: 10.1002/gch2.202300063] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Revised: 05/28/2023] [Indexed: 09/26/2023]
Abstract
The remarkable control function over the functional material formation process enabled by droplet microfluidic emulsification approaches can lead to the efficient and one-step encapsulation of active substances in microparticles, with the microparticle characteristics well regulated. In comparison to the conventional fabrication methods, droplet microfluidic technology can not only construct microparticles with various shapes, but also provide excellent templates, which enrich and expand the application fields of microparticles. For instance, intersection with disciplines in pharmacy, life sciences, and others, modifying the structure of microspheres and appending functional materials can be completed in the preparation of microparticles. The as-prepared polymer particles have great potential in a wide range of applications for chemical analysis, heavy metal adsorption, and detection. This review systematically introduces the devices and basic principles of particle preparation using droplet microfluidic technology and discusses the research of functional microparticle formation with high monodispersity, involving a plethora of types including spherical, nonspherical, and Janus type, as well as core-shell, hole-shell, and controllable multicompartment particles. Moreover, this review paper also exhibits a critical analysis of the current status and existing challenges, and outlook of the future development in the emerging fields has been discussed.
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Affiliation(s)
- Fei Long
- Department of MechanicalMaterials and Manufacturing EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
- Center of Materials Science and Optoelectronics EngineeringUniversity of Chinese Academy of SciencesBeijing100049P. R. China
- Zhejiang Key Laboratory of Additive Manufacturing MaterialsNingbo Institute of Materials Technology and EngineeringChinese Academy of SciencesNingbo315201P. R. China
- Research Group for Fluids and Thermal EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
- Nottingham Ningbo China Beacons of Excellence Research and Innovation InstituteNingbo315040P. R. China
| | - Yanhong Guo
- Department of MechanicalMaterials and Manufacturing EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
- Research Group for Fluids and Thermal EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
| | - Zhiyu Zhang
- Department of MechanicalMaterials and Manufacturing EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
- Research Group for Fluids and Thermal EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
- Nottingham Ningbo China Beacons of Excellence Research and Innovation InstituteNingbo315040P. R. China
| | - Jing Wang
- Nottingham Ningbo China Beacons of Excellence Research and Innovation InstituteNingbo315040P. R. China
- Department of Electrical and Electronic EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
| | - Yong Ren
- Department of MechanicalMaterials and Manufacturing EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
- Research Group for Fluids and Thermal EngineeringUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
- Nottingham Ningbo China Beacons of Excellence Research and Innovation InstituteNingbo315040P. R. China
- Key Laboratory of Carbonaceous Wastes Processing and Process Intensification Research of Zhejiang ProvinceUniversity of Nottingham Ningbo ChinaNingbo315100P. R. China
| | - Yuchuan Cheng
- Center of Materials Science and Optoelectronics EngineeringUniversity of Chinese Academy of SciencesBeijing100049P. R. China
- Zhejiang Key Laboratory of Additive Manufacturing MaterialsNingbo Institute of Materials Technology and EngineeringChinese Academy of SciencesNingbo315201P. R. China
| | - Gaojie Xu
- Center of Materials Science and Optoelectronics EngineeringUniversity of Chinese Academy of SciencesBeijing100049P. R. China
- Zhejiang Key Laboratory of Additive Manufacturing MaterialsNingbo Institute of Materials Technology and EngineeringChinese Academy of SciencesNingbo315201P. R. China
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Jurina T, Sokač Cvetnić T, Šalić A, Benković M, Valinger D, Gajdoš Kljusurić J, Zelić B, Jurinjak Tušek A. Application of Spectroscopy Techniques for Monitoring (Bio)Catalytic Processes in Continuously Operated Microreactor Systems. Catalysts 2023. [DOI: 10.3390/catal13040690] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/05/2023] Open
Abstract
In the last twenty years, the application of microreactors in chemical and biochemical industrial processes has increased significantly. The use of microreactor systems ensures efficient process intensification due to the excellent heat and mass transfer within the microchannels. Monitoring the concentrations in the microchannels is critical for a better understanding of the physical and chemical processes occurring in micromixers and microreactors. Therefore, there is a growing interest in performing in-line and on-line analyses of chemical and/or biochemical processes. This creates tremendous opportunities for the incorporation of spectroscopic detection techniques into production and processing lines in various industries. In this work, an overview of current applications of ultraviolet–visible, infrared, Raman spectroscopy, NMR, MALDI-TOF-MS, and ESI-MS for monitoring (bio)catalytic processes in continuously operated microreactor systems is presented. The manuscript includes a description of the advantages and disadvantages of the analytical methods listed, with particular emphasis on the chemometric methods used for spectroscopic data analysis.
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Affiliation(s)
- Tamara Jurina
- Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva ul. 6, 10 000 Zagreb, Croatia
| | - Tea Sokač Cvetnić
- Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva ul. 6, 10 000 Zagreb, Croatia
| | - Anita Šalić
- Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, 10 000 Zagreb, Croatia
| | - Maja Benković
- Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva ul. 6, 10 000 Zagreb, Croatia
| | - Davor Valinger
- Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva ul. 6, 10 000 Zagreb, Croatia
| | - Jasenka Gajdoš Kljusurić
- Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva ul. 6, 10 000 Zagreb, Croatia
| | - Bruno Zelić
- Faculty of Chemical Engineering and Technology, University of Zagreb, Marulićev trg 19, 10 000 Zagreb, Croatia
- Department for Packaging, Recycling and Environmental Protection, University North, Trg dr. Žarka Dolinara 1, 48 000 Koprivnica, Croatia
| | - Ana Jurinjak Tušek
- Faculty of Food Technology and Biotechnology, University of Zagreb, Pierottijeva ul. 6, 10 000 Zagreb, Croatia
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Practical Online Characterization of the Properties of Hydrocracking Bottom Oil via Near-Infrared Spectroscopy. Processes (Basel) 2023. [DOI: 10.3390/pr11030829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/12/2023] Open
Abstract
Providing real-time information on the chemical properties of hydrocracking bottom oil (HBO) as the feedstock for ethylene cracker while minimizing processing time, is important to improve the real-time optimization of ethylene production. In this study, a novel approach for estimating the properties of HBO samples was developed on the basis of near-infrared (NIR) spectra. The main noise and extreme samples in the spectral data were removed by combining discrete wavelet transform with principal component analysis and Hotelling’s T2 test. Kernel partial least squares (KPLS) regression was utilized to account for the nonlinearities between NIR data and the chemical properties of HBO. Compared with the principal component regression, partial least squares regression, and artificial neural network, the KPLS model had a better performance of obtaining acceptable values of root mean square error of prediction (RMSEP) and mean absolute relative error (MARE). All RMSEP and MARE values of density, Bureau of Mines correlation index, paraffins, isoparaffins, and naphthenes were less than 1.0 and 3.0, respectively. The accuracy of the industrial NIR online measurement system during consecutive running periods in predicting the chemical properties of HBO was satisfactory. The yield of high value-added products increased by 0.26 percentage points and coil outlet temperature decreased by 0.25 °C, which promoted economic benefits of the ethylene cracking process and boosted industrial reform from automation to digitization and intelligence.
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Nondestructive Detection of Pesticide Residue (Chlorpyrifos) on Bok Choi ( Brassica rapa subsp. Chinensis) Using a Portable NIR Spectrometer Coupled with a Machine Learning Approach. Foods 2023; 12:foods12050955. [PMID: 36900472 PMCID: PMC10001395 DOI: 10.3390/foods12050955] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2023] [Revised: 02/19/2023] [Accepted: 02/21/2023] [Indexed: 02/27/2023] Open
Abstract
The contamination of agricultural products, such as vegetables, by pesticide residues has received considerable attention worldwide. Pesticide residue on vegetables constitutes a potential risk to human health. In this study, we combined near infrared (NIR) spectroscopy with machine learning algorithms, including partial least-squares discrimination analysis (PLS-DA), support vector machine (SVM), artificial neural network (ANN), and principal component artificial neural network (PC-ANN), to identify pesticide residue (chlorpyrifos) on bok choi. The experimental set comprised 120 bok choi samples obtained from two small greenhouses that were cultivated separately. We performed pesticide and pesticide-free treatments with 60 samples in each group. The vegetables for pesticide treatment were fortified with 2 mL/L of chlorpyrifos 40% EC residue. We connected a commercial portable NIR spectrometer with a wavelength range of 908-1676 nm to a small single-board computer. We analyzed the pesticide residue on bok choi using UV spectrophotometry. The most accurate model correctly classified 100% of the samples used in the calibration set in terms of the content of chlorpyrifos residue on samples using SVM and PC-ANN with raw data spectra. Thus, we tested the model using an unknown dataset of 40 samples to verify the robustness of the model, which produced a satisfactory F1-score (100%). We concluded that the proposed portable NIR spectrometer coupled with machine learning approaches (PLS-DA, SVM, and PC-ANN) is appropriate for the detection of chlorpyrifos residue on bok choi.
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Grgić F, Jurina T, Valinger D, Gajdoš Kljusurić J, Jurinjak Tušek A, Benković M. Near-Infrared Spectroscopy Coupled with Chemometrics and Artificial Neural Network Modeling for Prediction of Emulsion Droplet Diameters. MICROMACHINES 2022; 13:mi13111876. [PMID: 36363897 PMCID: PMC9695841 DOI: 10.3390/mi13111876] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2022] [Revised: 10/24/2022] [Accepted: 10/26/2022] [Indexed: 06/13/2023]
Abstract
There is increased interest in the food industry for emulsions as delivery systems to preserve the stability of sensitive biocompounds with the aim of improving their bioavailability, solubility, and stability; maintaining their texture; and controlling their release. Emulsification in continuously operated microscale devices enables the production of emulsions of controllable droplet sizes and reduces the amount of emulsifier and time consumption, while NIR, as a nondestructive, noninvasive, fast, and efficient technique, represents an interesting aspect for emulsion investigation. The aim of this work was to predict the average Feret droplet diameter of oil-in-water and oil-in-aqueous mint extract emulsions prepared in a continuously operated microfluidic device with different emulsifiers (PEG 1500, PEG 6000, and PEG 20,000) based on the combination of near-infrared (NIR) spectra with chemometrics (principal component analysis (PCA) and partial least-squares (PLS) regression) and artificial neural network (ANN) modeling. PCA score plots for average preprocessed NIR spectra show the specific grouping of the samples into three groups according to the emulsifier used, while the PCA analysis of the emulsion samples with different emulsifiers showed the specific grouping of the samples based on the amount of emulsifier used. The developed PLS models had higher R2 values for oil-in-water emulsions, ranging from 0.6863 to 0.9692 for calibration, 0.5617 to 0.8740 for validation, and 0.4618 to 0.8692 for prediction, than oil-in-aqueous mint extract emulsions, with R2 values that were in range of 0.8109-0.8934 for calibration, 0.5017-0.6620, for validation and 0.5587-0.7234 for prediction. Better results were obtained for the developed nonlinear ANN models, which showed R2 values in the range of 0.9428-0.9917 for training, 0.8515-0.9294 for testing, and 0.7377-0.8533 for the validation of oil-in-water emulsions, while for oil-in-aqueous mint extract emulsions R2 values were higher, in the range of 0.9516-0.9996 for training, 0.9311-0.9994 for testing, and 0.8113-0.9995 for validation.
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Qualitative and Quantitative Detection of Acacia Honey Adulteration with Glucose Syrup Using Near-Infrared Spectroscopy. SEPARATIONS 2022. [DOI: 10.3390/separations9100312] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
Abstract
Honey adulteration with cheap sweeteners such as corn syrup or invert syrup results in honey of lesser quality that can harm the objectives of both manufacturers and consumers. Therefore, there is a growing interest for the development of a fast and simple method for adulteration detection. In this work, near-infrared spectroscopy (NIR) was used for the detection of honey adulteration and changes in the physical and chemical properties of the prepared adulterations. Fifteen (15) acacia honey samples were adulterated with glucose syrup in a range from 10% to 90%. Raw and pre-processed NIR spectra of pure honey samples and prepared adulterations were subjected to Principal Component Analysis (PCA), Partial Least Squares (PLS) regression, and Artificial Neural Network (ANN) modeling. The results showed that PCA ensures distinct grouping of samples in pure honey samples, honey adulterations, and pure adulteration using NIR spectra after the Multiplicative Scatter Correction (MSC) method. Furthermore, PLS models developed for the prediction of the added adulterant amount, moisture content, and conductivity can be considered sufficient for screening based on RPD and RER values (1.7401 < RPD < 2.7601; 7.7128 < RER < 8.7157) (RPD of 2.7601; RER of 8.7157) and can be moderately used in practice. The R2validation of the developed ANN models was greater than 0.86 for all outputs examined. Based on the obtained results, it can be concluded that NIR coupled with ANN modeling can be considered an efficient tool for honey adulteration quantification.
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