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Landoni M, Cassani E, Ghidoli M, Colombo F, Sangiorgio S, Papa G, Adani F, Pilu R. Brachytic2 mutation is able to counteract the main pleiotropic effects of brown midrib3 mutant in maize. Sci Rep 2022; 12:2446. [PMID: 35165340 PMCID: PMC8844417 DOI: 10.1038/s41598-022-06428-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2021] [Accepted: 01/21/2022] [Indexed: 11/09/2022] Open
Abstract
Maize is the basis of nutrition of domesticated herbivores and one of the most promising energy crops. The presence of lignin in the cell wall, tightly associated to carbohydrates, prevents the physical access of enzymes such as cellulase, limiting the carbohydrate degradability and consequently the energy value. To increase the utilization of the biomass cellulose content, the challenge of breeding programs is to lower or modify the lignin components. In maize several mutations are able to modify the lignin content and in particular the mutation in brown midrib3 (bm3) gene appeared as one of the most promising in breeding programs. Unfortunately this mutation has several negative pleiotropic effects on various important agronomic traits such as stay green, lodging and susceptibility to several infections.The maize Brachyitic 2 (br2) gene encodes for a putative protein involved in polar movement of auxins. br2 mutant plants are characterized by shortening of lower stalk internodes, unusual stalk strength and tolerance to wind lodging, darker leaves persisting longer in the active green state in comparison to wild type plants, suggesting a possible utilization of br2 plants to counteract the negative effects of the bm3 mutation. In this work, we report the generation and a preliminary characterization of the double mutant bm3 br2, suggesting the potential use of this new genetic material to increase biomass cellulose utilization.
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Affiliation(s)
- Michela Landoni
- Dipartimento di Bioscienze, Università degli Studi di Milano, Via Celoria 26, 20133, Milan, Italy
| | - Elena Cassani
- DiSAA, Genetic Laboratory, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy
| | - Martina Ghidoli
- DiSAA, Genetic Laboratory, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy
| | - Federico Colombo
- DiSAA, Genetic Laboratory, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy
| | - Stefano Sangiorgio
- DiSAA, Genetic Laboratory, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy
| | - Gabriella Papa
- DiSAA, Gruppo Ricicla, Biomass and Bioenergy Laboratory, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy
| | - Fabrizio Adani
- DiSAA, Gruppo Ricicla, Biomass and Bioenergy Laboratory, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy
| | - Roberto Pilu
- DiSAA, Genetic Laboratory, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy. .,Dipartimento di Scienze Agrarie e Ambientali - Produzione, Territorio, Agroenergia, Università degli Studi di Milano, Via Celoria 2, 20133, Milan, Italy.
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Leveau S, Parent B, Zaka S, Martre P. Sensitivities to temperature and evaporative demand in wheat relatives. JOURNAL OF EXPERIMENTAL BOTANY 2021:erab431. [PMID: 34559211 DOI: 10.1093/jxb/erab431] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Indexed: 06/13/2023]
Abstract
There is potential sources of alleles and genes currently locked into wheat-related species that could be introduced into wheat breeding programs for current and future hot and dry climates. However, neither the intra- nor the inter-specific diversity of the responses of leaf growth and transpiration to temperature and evaporative demand have been investigated in a large diversity of wheat-related species. By analysing 12 groups of wheat-related sub-species, we questioned the n-dimensional structure of the genetic diversity for traits linked to plant vegetative structures and development, leaf expansion and transpiration together with their responses to "non-stressing" range of temperature and evaporative demand. In addition to provide new insight on how genome type, ploidy level, phylogeny and breeding pressure together structure this genetic diversity, this study provides new mathematical formalisms and the associated parameters of trait responses in the large genetic diversity of wheat-related species. This potentially allow crop models predicting the impact of this diversity on yield, and indicate potential sources of varietal improvement for modern wheat germplasms, through interspecific crosses.
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Affiliation(s)
- Stéphane Leveau
- LEPSE, Univ Montpellier, INRAE, Institut Agro, Montpellier, France
- ITK, Clapiers, France
| | - Boris Parent
- LEPSE, Univ Montpellier, INRAE, Institut Agro, Montpellier, France
| | | | - Pierre Martre
- LEPSE, Univ Montpellier, INRAE, Institut Agro, Montpellier, France
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Musacchio A, Mas-Pla J, Soana E, Re V, Sacchi E. Governance and groundwater modelling: Hints to boost the implementation of the EU Nitrate Directive. The Lombardy Plain case, N Italy. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 782:146800. [PMID: 33838379 DOI: 10.1016/j.scitotenv.2021.146800] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/05/2020] [Revised: 03/23/2021] [Accepted: 03/24/2021] [Indexed: 06/12/2023]
Abstract
The EU Nitrate Directive has been ruling for almost 30 years, nevertheless nitrate concentration in the Lombardy Plain did not decrease. Together with failures of management implementation, a possible cause for such field observations is that management actions were taken without adequately considering the actual hydrogeological dynamics. To consider this aspect, the paper presents a groundwater flow and transport numerical model of a specific area of the Lombardy Plain. The aim of this model is to demonstrate how modelling, as a management tool, can be useful in the governance process. The groundwater model, using well-known MODFLOW-MT3D codes, is based on existing hydrogeological information, while a nitrogen mass balance has been performed at municipal scale to determine the agricultural N surplus to the subsurface. The model adequately reproduces head levels and nitrate concentrations in observation wells for a 10-year simulation period, showing that 4.5% of the N annual input remains stored in the system. The model indicates the efficiency of rivers and springs to export N out from the system at an estimated rate of 77.5% of the annual N inputs. Back to governance, the model shows that management data at municipal level (e.g. irrigation rates, groundwater withdrawal, N net recharge) provide a satisfactory scale for successfully reproducing nitrate evolution. Hence those variables that can be object of debate during a governance process can be treated as input data to the numerical model. Therefore, backcasting exercises can be conducted to check whether the model outcome fits with the expected results of specific management actions. The model highlights how the N mass balance evolves, providing clues on which factors can be managed to reduce nitrate concentrations and meet the Directive's requirements. Numerical groundwater models, as an option to address water management issues, ultimately contribute to solve the information and capacity governance gaps.
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Affiliation(s)
- Arianna Musacchio
- Department of Earth and Environmental Sciences, University of Pavia, Via Ferrata 1, 27100 Pavia, Italy; Institut Català de Recerca de l'Aigua (ICRA), and GAiA-Geocamb, -Dept. de Ciències Ambientals, Universitat de Girona, c/Emili Grahit, 101, 17003 Girona, Spain.
| | - Josep Mas-Pla
- Institut Català de Recerca de l'Aigua (ICRA), and GAiA-Geocamb, -Dept. de Ciències Ambientals, Universitat de Girona, c/Emili Grahit, 101, 17003 Girona, Spain
| | - Elisa Soana
- Department of Life Sciences and Biotechnology, University of Ferrara, Via L. Borsari 46, 44121 Ferrara, Italy
| | - Viviana Re
- Department of Earth and Environmental Sciences, University of Pavia, Via Ferrata 1, 27100 Pavia, Italy; Department of Earth Sciences, University of Pisa, Via Santa Maria 53, 56126 Pisa, Italy
| | - Elisa Sacchi
- Department of Earth and Environmental Sciences, University of Pavia, Via Ferrata 1, 27100 Pavia, Italy
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Humboldt-Dachroeden S, Mantovani A. Assessing Environmental Factors within the One Health Approach. MEDICINA (KAUNAS, LITHUANIA) 2021; 57:240. [PMID: 33807528 PMCID: PMC7999754 DOI: 10.3390/medicina57030240] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 02/25/2021] [Accepted: 02/28/2021] [Indexed: 01/08/2023]
Abstract
Background: One Health is a comprehensive and multisectoral approach to assess and examine the health of animals, humans and the environment. However, while the One Health approach gains increasing momentum, its practical application meets hindrances. This paper investigates the environmental pillar of the One Health approach, using two case studies to highlight the integration of environmental considerations. The first case study pertains to the Danish monitoring and surveillance programme for antimicrobial resistance, DANMAP. The second case illustrates the occurrence of aflatoxin M1 (AFM1) in milk in dairy-producing ruminants in Italian regions. Method: A scientific literature search was conducted in PubMed and Web of Science to locate articles informing the two cases. Grey literature was gathered to describe the cases as well as their contexts. Results: 19 articles and 10 reports were reviewed and informed the two cases. The cases show how the environmental component influences the apparent impacts for human and animal health. The DANMAP highlights the two approaches One Health and farm to fork. The literature provides information on the comprehensiveness of the DANMAP, but highlights some shortcomings in terms of environmental considerations. The AFM1 case, the milk metabolite of the carcinogenic mycotoxin aflatoxin B1, shows that dairy products are heavily impacted by changes of the climate as well as by economic drivers. Conclusions: The two cases show that environmental conditions directly influence the onset and diffusion of hazardous factors. Climate change, treatment of soils, water and standards in slaughterhouses as well as farms can have a great impact on the health of animals, humans and the environment. Hence, it is important to include environmental considerations, for example, via engaging environmental experts and sharing data. Further case studies will help to better define the roles of environment in One Health scenarios.
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Affiliation(s)
- Sarah Humboldt-Dachroeden
- Department of Social Science and Business, Roskilde University, Universitetsvej 1, 4000 Roskilde, Denmark
| | - Alberto Mantovani
- Department on Food Safety, Nutrition and Veterinary Public Health, Italian National Institute of Health (ISS), 00161 Roma, Italy;
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Balestrini R, Delconte CA, Sacchi E, Buffagni A. Groundwater-dependent ecosystems as transfer vectors of nitrogen from the aquifer to surface waters in agricultural basins: The fontanili of the Po Plain (Italy). THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 753:141995. [PMID: 32892001 DOI: 10.1016/j.scitotenv.2020.141995] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 08/07/2020] [Accepted: 08/24/2020] [Indexed: 06/11/2023]
Abstract
The most spread groundwater-dependent ecosystems in the River Po valley are semi-natural lowland springs called "fontanili". They provide specific habitats and support high biodiversity, but are often strongly impaired by agricultural pollution. In the present study we seasonally monitored the discharge and nitrogen concentration of 48 fontanili from the Adda and the Ticino river basins. We observed a wide spatial variability of both NO3-N concentrations and flows. The annual NO3-N loads ranged from <1 to 75 t y-1 and < 1 to 29 t y-1 in the Adda and Ticino basins respectively. In the springs characterized by variable discharge the N loads were exported mostly during the summer season when water table level was elevated mainly due to irrigation. Upscaling the mean NO3-N load to each river catchment based on the total number of springs, we obtained an aerial export of 33.2 ± 6.0 and 12.5 ± 3.2 kg y-1 ha-1. Such loads accounted for the 30.4 and 21.5% of the N surplus estimated for the Adda and Ticino basins respectively. Random Forest analysis was performed to identify the most important environmental variables influencing the nitrate contamination in the spring waters. A total of 22 explanatory variables related to N sources, land uses, intrinsic hydrogeologic and soil proprieties, in "situ" and remotely sensed variables were considered. The percent of soil cultivated with maize in a 500 m radius buffer area surrounding the sampling site, the N from manure and the distance of each spring from the main river were the most effective factors in controlling the NO3-N concentration in the fontanili water. The outcomes of this work open up to achievable management prospects for the protection and recovery of fontanili waters, and can be particularly useful for water managers in identifying areas and sites where restoration plans should be a priority.
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Affiliation(s)
- R Balestrini
- Water Research Institute, National Research Council (CNR-IRSA), via del Mulino 19, 20861 Brugherio, MB, Italy.
| | - C A Delconte
- Water Research Institute, National Research Council (CNR-IRSA), via del Mulino 19, 20861 Brugherio, MB, Italy
| | - E Sacchi
- Department of Earth and Environmental Sciences, University of Pavia, via Ferrata 1, 27100 Pavia, Italy
| | - A Buffagni
- Water Research Institute, National Research Council (CNR-IRSA), via del Mulino 19, 20861 Brugherio, MB, Italy
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Reactive Silica Traces Manure Spreading in Alluvial Aquifers Affected by Nitrate Contamination: A Case Study in a High Plain of Northern Italy. WATER 2020. [DOI: 10.3390/w12092511] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
In the northern sector of the Po River Plain (Italy), widespread intensive agriculture and animal farming are supported by large amounts of water from Alpine lakes and their emissaries. Flood irrigation and excess fertilization with manure affect both the hydrology and the chemical quality of surface and groundwater, resulting in diffuse nitrogen pollution. However, studies analyzing the mechanisms linking agricultural practices with vertical and horizontal nitrogen paths are scarce in this area. We investigated groundwater quality and quantity in an unconfined, coarse-grained alluvial aquifer adjacent to the Mincio River (a tributary of the Po River), where steep summer gradients of nitrate (NO3−) concentrations are reported. The effects of manure on solutes’ vertical transport during precipitation events in fertilized and in control soils were simulated under laboratory conditions. The results show high SiO2 and NO3− leaching in fertilized soils. Similarly, field data are characterized by high SiO2 and NO3− concentrations, with a comparable spatial distribution but a different temporal evolution, suggesting their common origin but different processes affecting their concentrations in the study area. Our results show that SiO2 can be used as a conservative tracer of manure spreading, as it does not undergo biogeochemical processes that significantly alter its concentrations. On the contrary, nitrate displays large short-term variations related to aquifer recharge (i.e., flood irrigation and precipitation). In fact, aquifer recharge may promote immediate solubilization and stimulate nitrification, resulting in high NO3− concentrations up to 95.9 mg/L, exceeding the Water Framework Directive (WFD) thresholds. When recharge ends, anoxic conditions likely establish in the saturated zone, favoring denitrification and resulting in a steep decrease in NO3− concentrations.
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Christensen AJ, Srinivasan V, Hart JC, Marshall-Colon A. Use of computational modeling combined with advanced visualization to develop strategies for the design of crop ideotypes to address food security. Nutr Rev 2018; 76:332-347. [PMID: 29562368 PMCID: PMC5892862 DOI: 10.1093/nutrit/nux076] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Sustainable crop production is a contributing factor to current and future food security. Innovative technologies are needed to design strategies that will achieve higher crop yields on less land and with fewer resources. Computational modeling coupled with advanced scientific visualization enables researchers to explore and interact with complex agriculture, nutrition, and climate data to predict how crops will respond to untested environments. These virtual observations and predictions can direct the development of crop ideotypes designed to meet future yield and nutritional demands. This review surveys modeling strategies for the development of crop ideotypes and scientific visualization technologies that have led to discoveries in "big data" analysis. Combined modeling and visualization approaches have been used to realistically simulate crops and to guide selection that immediately enhances crop quantity and quality under challenging environmental conditions. This survey of current and developing technologies indicates that integrative modeling and advanced scientific visualization may help overcome challenges in agriculture and nutrition data as large-scale and multidimensional data become available in these fields.
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Affiliation(s)
- A J Christensen
- National Center for Supercomputing Applications, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
| | - Venkatraman Srinivasan
- Pacific Northwest National Laboratory, Richland, Washington, USA, and was with the Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
| | - John C Hart
- Department of Computer Science, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
| | - Amy Marshall-Colon
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, Illinois, USA
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Lamaoui M, Jemo M, Datla R, Bekkaoui F. Heat and Drought Stresses in Crops and Approaches for Their Mitigation. Front Chem 2018; 6:26. [PMID: 29520357 DOI: 10.3389/fchem.2018.00026/full] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Accepted: 02/01/2018] [Indexed: 05/28/2023] Open
Abstract
Drought and heat are major abiotic stresses that reduce crop productivity and weaken global food security, especially given the current and growing impacts of climate change and increases in the occurrence and severity of both stress factors. Plants have developed dynamic responses at the morphological, physiological and biochemical levels allowing them to escape and/or adapt to unfavorable environmental conditions. Nevertheless, even the mildest heat and drought stress negatively affects crop yield. Further, several independent studies have shown that increased temperature and drought can reduce crop yields by as much as 50%. Response to stress is complex and involves several factors including signaling, transcription factors, hormones, and secondary metabolites. The reproductive phase of development, leading to the grain production is shown to be more sensitive to heat stress in several crops. Advances coming from biotechnology including progress in genomics and information technology may mitigate the detrimental effects of heat and drought through the use of agronomic management practices and the development of crop varieties with increased productivity under stress. This review presents recent progress in key areas relevant to plant drought and heat tolerance. Furthermore, an overview and implications of physiological, biochemical and genetic aspects in the context of heat and drought are presented. Potential strategies to improve crop productivity are discussed.
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Affiliation(s)
- Mouna Lamaoui
- AgroBioSciences Division, University Mohammed VI Polytechnic, Benguérir, Morocco
| | - Martin Jemo
- AgroBioSciences Division, University Mohammed VI Polytechnic, Benguérir, Morocco
- Office Chérifien des Phosphates-Africa, Casablanca, Morocco
| | - Raju Datla
- National Research Council Canada, Saskatoon, SK, Canada
| | - Faouzi Bekkaoui
- AgroBioSciences Division, University Mohammed VI Polytechnic, Benguérir, Morocco
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Lamaoui M, Jemo M, Datla R, Bekkaoui F. Heat and Drought Stresses in Crops and Approaches for Their Mitigation. Front Chem 2018; 6:26. [PMID: 29520357 PMCID: PMC5827537 DOI: 10.3389/fchem.2018.00026] [Citation(s) in RCA: 219] [Impact Index Per Article: 36.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2017] [Accepted: 02/01/2018] [Indexed: 01/09/2023] Open
Abstract
Drought and heat are major abiotic stresses that reduce crop productivity and weaken global food security, especially given the current and growing impacts of climate change and increases in the occurrence and severity of both stress factors. Plants have developed dynamic responses at the morphological, physiological and biochemical levels allowing them to escape and/or adapt to unfavorable environmental conditions. Nevertheless, even the mildest heat and drought stress negatively affects crop yield. Further, several independent studies have shown that increased temperature and drought can reduce crop yields by as much as 50%. Response to stress is complex and involves several factors including signaling, transcription factors, hormones, and secondary metabolites. The reproductive phase of development, leading to the grain production is shown to be more sensitive to heat stress in several crops. Advances coming from biotechnology including progress in genomics and information technology may mitigate the detrimental effects of heat and drought through the use of agronomic management practices and the development of crop varieties with increased productivity under stress. This review presents recent progress in key areas relevant to plant drought and heat tolerance. Furthermore, an overview and implications of physiological, biochemical and genetic aspects in the context of heat and drought are presented. Potential strategies to improve crop productivity are discussed.
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Affiliation(s)
- Mouna Lamaoui
- AgroBioSciences Division, University Mohammed VI Polytechnic, Benguérir, Morocco
| | - Martin Jemo
- AgroBioSciences Division, University Mohammed VI Polytechnic, Benguérir, Morocco
- Office Chérifien des Phosphates-Africa, Casablanca, Morocco
| | - Raju Datla
- National Research Council Canada, Saskatoon, SK, Canada
| | - Faouzi Bekkaoui
- AgroBioSciences Division, University Mohammed VI Polytechnic, Benguérir, Morocco
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Gilardelli C, Confalonieri R, Cappelli GA, Bellocchi G. Sensitivity of WOFOST-based modelling solutions to crop parameters under climate change. Ecol Modell 2018. [DOI: 10.1016/j.ecolmodel.2017.11.003] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
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