Fixation of CO2, electron donor and redox microenvironment regulate succinic acid production in Citrobacter amalonaticus

Advances in succinic acid production: the enhancement of CO2 fixation for the carbon sequestration benefits

Succinic acid (SA), one of the 12 top platform chemicals produced from biomass, is a precursor of various high value-added derivatives. Specially, 1 mol CO2 is assimilated in 1 mol SA biosynthetic route under anaerobic conditions, which helps to achieve carbon reduction goals. In this review, methods for enhanced CO2 fixation in SA production and utilization of waste biomass for SA production are reviewed. Bioelectrochemical and bioreactor coupling systems constructed with off-gas reutilization to capture CO2 more efficiently were highlighted. In addition, the techno-economic analysis and carbon sequestration benefits for the synthesis of bio-based SA from CO2 and waste biomass are analyzed. Finally, a droplet microfluidics-based high-throughput screening technique applied to the future bioproduction of SA is proposed as a promising approach.

Steering the product spectrum in high-pressure anaerobic processes: CO2 partial pressure as a novel tool in biorefinery concepts

BACKGROUND

Elevated CO₂ partial pressure (pCO₂) has been proposed as a potential steering parameter for selective carboxylate production in mixed culture fermentation. It is anticipated that intermediate product spectrum and production rates, as well as changes in the microbial community, are (in)directly influenced by elevated pCO₂. However, it remains unclear how pCO₂ interacts with other operational conditions, namely substrate specificity, substrate-to-biomass (S/X) ratio and the presence of an additional electron donor, and what effect pCO₂ has on the exact composition of fermentation products. Here, we investigated possible steering effects of elevated pCO₂ combined with (1) mixed substrate (glycerol/glucose) provision; (2) subsequent increments in substrate concentration to increase the S/X ratio; and (3) formate as an additional electron donor.

RESULTS

Metabolite predominance, e.g., propionate vs. butyrate/acetate, and cell density, depended on interaction effects between pCO₂-S/X ratio and pCO₂-formate. Individual substrate consumption rates were negatively impacted by the interaction effect between pCO₂-S/X ratio and were not re-established after lowering the S/X ratio and adding formate. The product spectrum was influenced by the microbial community composition, which in turn, was modified by substrate type and the interaction effect between pCO₂-formate. High propionate and butyrate levels strongly correlated with Negativicutes and Clostridia predominance, respectively. After subsequent pressurized fermentation phases, the interaction effect between pCO₂-formate enabled a shift from propionate towards succinate production when mixed substrate was provided.

CONCLUSIONS

Overall, interaction effects between elevated pCO₂, substrate specificity, high S/X ratio and availability of reducing equivalents from formate, rather than an isolated pCO₂ effect, modified the proportionality of propionate, butyrate and acetate in pressurized mixed substrate fermentations at the expense of reduced consumption rates and increased lag-phases. The interaction effect between elevated pCO₂ and formate was beneficial for succinate production and biomass growth with a glycerol/glucose mixture as the substrate. The positive effect may be attributed to the availability of extra reducing equivalents, likely enhanced carbon fixating activity and hindered propionate conversion due to increased concentration of undissociated carboxylic acids.

Enhanced carbon dioxide biomethanation with hydrogen using anaerobic granular sludge and metal-organic frameworks: Microbial community response and energy metabolism analysis

In this work, metal-organic frameworks (MOFs) were prepared to evaluate its impact on carbon dioxide (CO₂) biomethanization during anaerobic degradation (AD). The results showed that MOFs significantly improved the CO₂ biomethanation efficiency, especially in the AD reactors using a concentration of 1.0 g/L MOFs. Furthermore, MOFs promoted direct interspecific electron transfer and alleviated the hydrogen competition of bacteria. Meanwhile, hydrogenotrophic methanogens were enriched in the AD reactors with MOFs. After the addition of MOFs, there was 3.28 times and 3.41 times increase in the abundance of metabolic functions related to methanogenesis by CO₂ reduction with hydrogen and dark hydrogen oxidation, respectively. There was an increased abundance of all genes that encode the key enzymes used in methane metabolism. However, functional genes involved in nitrate reduction had their expressions inhibited. The work may offer a contribution to helping the industry achieve the carbon capture and utilization policy.

Potential matching of carbon capture storage and utilization (CCSU) as enhanced oil recovery in perspective to Indian oil refineries

Carbon capture storage and utilization is not a new technology, but its application to reduce CO2 emissions from the refinery sector is just now emerging as promising mitigation. This study will look closely at opportunities to match CO2 sources with potential sinks by matching carbon-capturing projects at Indian oil refineries with Enhanced Oil Recovery (EOR) operations at nearby oil fields in India. This study has identified four such pairings of source-sink matching along with the challenges the first of the kind implementation of CCSU technology in specific projects. The study concludes with a discussion on the way forward and policy implications for the commercial use of the CCSU in India.

GRAPHICAL ABSTRACT

CCS Carbon Capture Storage; CCU Carbon Capture Utilization, EOR . Source: Authors' design.

Upgrading the value of anaerobic fermentation via renewable chemicals production: A sustainable integration for circular bioeconomy

The single bioprocess approach has certain limitations in terms of process efficiency, product synthesis, and effective resource utilization. Integrated or combined bioprocessing maximizes resource recovery and creates a novel platform to establish sustainable biorefineries. Anaerobic fermentation (AF) is a well-established process for the transformation of organic waste into biogas; conversely, biogas CO₂ separation is a challenging and expensive process. Biological fixation of CO₂ for succinic acid (SA) mitigates CO₂ separation issues and produces commercially important renewable chemicals. Additionally, utilizing digestate rich in volatile fatty acid (VFA) to produce medium-chain fatty acids (MCFAs) creates a novel integrated platform by utilizing residual organic metabolites. The present review encapsulates the advantages and limitations of AF along with biogas CO₂ fixation for SA and digestate rich in VFA utilization for MCFA in a closed-loop approach. Biomethane and biohydrogen processes CO₂ utilization for SA production is cohesively deliberated along with the role of biohydrogen as an alternative reducing agent to augment SA yields. Similarly, MCFA production using VFA as a substrate and functional role of electron donors namely ethanol, lactate, and hydrogen are comprehensively discussed. A road map to establish the fermentative biorefinery approach in the framework of AF integrated sustainable bioprocess development is deliberated along with limitations and factors influencing for techno-economic analysis. The discussed integrated approach significantly contributes to promote the circular bioeconomy by establishing carbon-neutral processes in accord with sustainable development goals.

Well Knowledge of the Physiology of Actinobacillus succinogenes to Improve Succinic Acid Production

The anaerobic fermentation of glucose and fructose was performed by Actinobacillus succinogenes 130Z in batch mode using three different volume of bioreactors (0.25, 1 and 3 L). The strategy used was the addition of MgCO3 and fumaric acid (FA) as mineral carbon and the precursor of succinic acid, respectively, in the culture media. Kinetics and yields of succinic acid (SA) production in the presence of sugars in a relevant synthetic medium were investigated. Work on the bench scale (3 L) showed the best results when compared to the small anaerobic reactor’s succinic acid yield and productivity after 96 h of fermentation. For an equal mixture of glucose and fructose used as substrate at 0.4 mol L−1 with the addition of FA as enhancer and under proven optimal conditions (pH 6.8, T = 37 °C, anaerobic condition and 1% v/v of biomass), about 0.5 mol L−1 of SA was obtained, while the theoretical production of succinic acid was 0.74 mol L−1. This concentration corresponded to an experimental yield of 0.88 (mol-C SA/mol-C sugars consumed anaerobically) and a volumetric productivity of 0.48 g-SA L−1 h−1. The succinic acid yield and concentration obtained were significant and in the order of those reported in the literature.

Bio-conversion of CO2 into biofuels and other value-added chemicals via metabolic engineering

Carbon dioxide (CO₂) occurs naturally in the atmosphere as a trace gas, which is produced naturally as well as by anthropogenic activities. CO₂ is a readily available source of carbon that in principle can be used as a raw material for the synthesis of valuable products. The autotrophic organisms are naturally equipped to convert CO₂ into biomass by obtaining energy from sunlight or inorganic electron donors. This autotrophic CO₂ fixation has been exploited in biotechnology, and microbial cell factories have been metabolically engineered to convert CO₂ into biofuels and other value-added bio-based chemicals. A variety of metabolic engineering efforts for CO₂ fixation ranging from basic copy, paste, and fine-tuning approaches to engineering and testing of novel synthetic CO₂ fixing pathways have been demonstrated. In this paper, we review the current advances and innovations in metabolic engineering for bio-conversion of CO₂ into bio biofuels and other value-added bio-based chemicals.

A New Approach to Produce Succinic Acid Through a Co-Culture System

Microorganisms can produce a wide range of bio-based chemicals that can be used in various industrial applications as molecules of interest. In the present work, an analysis of the power production by pure culture, co-culture, and sequential culture was performed. In this study, both the mono-culture and the co-culture strategies of Actinobacillus succinogenes with Saccharomyces cerevisiae as carbon sources to produce succinic acid using glucose and fructose were examined. The cultures were performed in batch mode and a great attention was paid to the co-culture system to improve the biosynthetic pathway between A. succinogenes and S. cerevisiae by combining these two strains in a single fermentation process. Under microaerobic and anaerobic conditions, the process was characterized in terms of sugars concentration, cell density, metabolites, yield (mol-C products/ mol-C sugars), the temperature conditions for productivity, and pH. The results showed that the process could consume glucose and fructose and could adapt to different concentrations of the two sugars more quickly than by a single organism and the best results were obtained in a sequential co-culture recording 0.27 mol L^-1 of succinic acid concentration and a volumetric productivity of 0.3 g L^-1 h^-1. Under the investigated operating conditions, the combination of these two strains in a single reactor produced a significant amount of succinic acid (0.70 mol-C SA/mol-C substrates). A simultaneous and sequential co-culture strategy can be a powerful new approach in the field of bio-based chemical production.

Metagenome Sequencing Reveals the Midgut Microbiota Makeup of Culex pipiens quinquefasciatus and Its Possible Relationship With Insecticide Resistance

Midgut microbiota can participate in the detoxification and metabolism processes in insects, but there are few reports on the relationship between midgut microbiota and insecticide resistance in mosquitoes. In this study, we performed metagenomic sequencing on a susceptible strain (SS), a field-collected Hainan strain (HN), and a deltamethrin-resistant strain (RR) of Culex pipiens quinquefasciatus to understand the diversity and functions of their midgut microbiota. The results revealed differences in midgut microbiota among the three strains of Cx. pipiens quinquefasciatus. At the phylum level, Proteobacteria was the most prominent, accounting for nearly 70% of their midgut microbes. At the genus level, Aeromonas made up the highest proportion. In addition, Aeromonas, Morganella, Elizabethkingia, Enterobacter, Cedecea, and Thorsellia showed significant differences between strains. At the species level, Bacillus cereus, Enterobacter cloacae complex sp. 4DZ3-17B2, Streptomyces sp. CNQ329, and some species of Pseudomonas and Wolbachia were more abundant in the two resistant strains. Principal component analysis (PCA) showed that the SS strain had significantly different metagenomic functions than the two deltamethrin-resistant strains (HN and RR strain). The HN and RR strains differed from the SS strain in more than 10 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways. The analysis of species abundance and functional diversity can provide directions for future studies.

Tunable production of succinic acid at elevated pressures of CO2 in a high pressure gas fermentation reactor

Production of bio-based alternative of succinic acid (SA) has been growing due to the awareness on environmental advantages it offers, such as CO₂ sequestration. Current study focuses on evaluating the impact of different CO₂ partial pressures (0.6, 0.8, 1, 2 bar) on SA production and yield as well as on other parameters like acids profile and CO₂ fixation rate in Citrobacter amalonaticus. Increasing partial pressure to 2 bar enhanced SA production and maximum of 14.86 gL^-1 was achieved with a productivity of 0.36 gL^-1h^-1 and yield of 52.10%. Varying partial pressures depicted significant influence on total acids profile, where at lower pressures (0.6 bar) lactic (5.6 gL^-1) and acetic acids (4.1 gL^-1) became dominant products, while concentration of SA was 2.07 gL^-1, by the end of cycle. The desirable effect of moderately elevated pressures for converting CO₂ to platform chemicals can be a potential strategy in overcoming current challenges related to CO₂ abatement.

Urban biocycles - Closing metabolic loops for resilient and regenerative ecosystem: A perspective

Cities are at crossroads, confronting challenges posed by increasing population growth, climate change and faltering livability. These problems are prompting urban areas to chart novel path towards adopting sustainable production/consumption strategies. The alluring concept of circular economy (CE) that focuses on reuse and recycling of materials in technical and biological cycles to reduce waste generation is a critical intervention. Present article aims on precisely highlighting the importance of biogenic materials which have an immense potential to be transformed into a source of value in an urban ecosystem. It also sets out to explore the scope of implementing 'urban biocycles' that strategically directs the flow of resources, their use, extracting value in the form of nutrients, energy and materials post consumption within an urban metabolic regime. The concepts discussed contribute to biocycle economy by outlining emerging requirements, identification of common strategies, policies and emerging areas of research in line with sustainable development goals.