Atmospheric oxidation mechanism and kinetics of isoprene initiated by chlorine radicals: A computational study

Generation of 3-aminopropanamide and its cluster formation with nucleation precursors- a theoretical exploration

Aminoamides are formed in the atmospheric environments by the auto-oxidation of the parent diamines. In this work, the oxidation chemistry of diamine (1,3-Diaminopropane, Dap) to the amino amide (3- aminopropanamide, 3-APA) and its new particle formation potential with small atmospheric molecules such as NH3 (A), H2O (W) and H2SO4 (SA) are theoretically investigated using the M062X/6-311++G** theory. The bimolecular rate coefficient of the ·OH initiated H-atom abstraction is computed to be 1.01 × 10-11 cm3 molecule-1 s-1. Further reaction of the peroxy radical intermediate indicates that the pathway involving γ H- shift of the initially formed radical intermediates to be more favourable on kinetic grounds with the effective bimolecular rate coefficient of 3.87 × 10-14 cm3 molecule-1s-1. The thermodynamic barrier associated with the H-shifts involved in this pathway is in the range of 13-20 kcal/mol. The cluster formation of APA with SA is more favourable than the clusters with W and A, wherein the free energy of formation of (APA)(SA) and (APA)(SA)2 are -11.3 and -22.6 kcal/mol, respectively. However, the feasibility of cluster formation with W and A increases with the altitude and becomes spontaneous in the case of water at an altitude of 12 km. The present work indicates that aminoamides like 3-APA can participate in the initial stages of new particle formation events by forming clusters with SA molecules. The scattering parameters and topological analysis of different (Amide)(SA) clusters indicate more scattering properties for the (APA)(SA) cluster, which has an adverse effect on the atmosphere. Furthermore, topological analysis indicates that H-bond formation is more prominent in the (APA)(SA) cluster.

Oxidation characteristic and thermal runaway of isoprene

In this study, the oxidation characteristics of isoprene were investigated using a custom-designed mini closed pressure vessel test (MCPVT). The results show that isoprene is unstable and polymerization occurs under a nitrogen atmosphere. Under an oxygen atmosphere, the oxidation process of isoprene was divided into three stages: (1) isoprene reacts with oxygen to produce peroxide; (2) Peroxides produce free radicals through thermal decomposition; (3) Free radicals cause complex oxidation and thermal runaway reactions. The oxidation of isoprene conforms to the second-order reaction kinetics, and the activation energy was 86.88 kJ·mol-1. The thermal decomposition characteristics of the total oxidation product and purified peroxide mixture were determined by differential scanning calorimetry (DSC). The initial exothermic temperatures Ton were 371.17 K and 365.84 K, respectively. And the decomposition heat QDSC were 816.66 J·g-1 and 991.08 J·g-1, respectively. It indicates that high concentration of isoprene peroxide has a high risk of thermal runaway. The results of thermal runaway experiment showed that the temperature and pressure of isoprene oxidation were prone to rise rapidly, which indicates that the oxidation reaction was dangerous. The reaction products of isoprene were analyzed by gas chromatography-mass spectrometry (GC-MS). The main oxidation products were methyl vinyl ketone, methacrolein, 3-methylfuran, etc. The main thermal runaway products were dimethoxymethane, 2,3-pentanedione, naphthalene, etc. Based on the reaction products, the possible reaction pathway of isoprene was proposed.

Autoxidation Mechanism and Kinetics of Methacrolein in the Atmosphere

Elucidating the autoxidation of volatile organic compounds (VOCs) is crucial to understanding the formation mechanism of secondary organic aerosols, but it has been proven to be challenging due to the complexity of reactions under atmospheric conditions. Here, we report a comprehensive theoretical study of atmospheric autoxidation in VOCs exemplified by the atmospherically important methacrolein (MACR), a major oxidation product of isoprene. The results indicate that the Cl-adducts and H-abstraction products of MACR readily react with O₂ and undergo subsequent isomerizations via H-shift and cyclization, forming a large variety of lowly and highly oxygenated organic molecules. In particular, the first- and third-generation oxidation products derived from the Cl-adducts and the methyl-H-abstraction complexes are dominated in the atmospheric autoxidation, for which the fractional yields are remarkably affected by the NO concentration. The present findings have important implications for a systematical understanding of the oxidation processes of isoprene-derived compounds in the atmospheric environments.

Isoprene-Chlorine Oxidation in the Presence of NOx and Implications for Urban Atmospheric Chemistry

Fine particulate matter (PM_2.5) is a key indicator of urban air quality. Secondary organic aerosol (SOA) contributes substantially to the PM_2.5 concentration. Discrepancies between modeling and field measurements of SOA indicate missing sources and formation mechanisms. Recent studies report elevated concentrations of reactive chlorine species in inland and urban regions, which increase the oxidative capacity of the atmosphere and serve as sources for SOA and particulate chlorides. Chlorine-initiated oxidation of isoprene, the most abundant nonmethane hydrocarbon, is known to produce SOA under pristine conditions, but the effects of anthropogenic influences in the form of nitrogen oxides (NO_x) remain unexplored. Here, we investigate chlorine-isoprene reactions under low- and high-NO_x conditions inside an environmental chamber. Organic chlorides including C₅H₁₁ClO₃, C₅H₉ClO₃, and C₅H₉ClO₄ are observed as major gas- and particle-phase products. Modeling and experimental results show that the secondary OH-isoprene chemistry is significantly enhanced under high-NO_x conditions, accounting for up to 40% of all isoprene oxidized and leading to the suppression of organic chloride formation. Chlorine-initiated oxidation of isoprene could serve as a source for multifunctional (chlorinated) organic oxidation products and SOA in both pristine and anthropogenically influenced environments.

New mechanistic understanding for atmospheric oxidation of isoprene initiated by atomic chlorine

Isoprene is the most abundant non-methane VOC and a significant SOA contributor. The atmospheric oxidation initiated by atomic chlorine is an important sink for isoprene, especially in certain regions with high Cl concentration, while its detailed oxidation mechanism remains unclear. In this work, we comprehensively investigated the reaction mechanism of isoprene with Cl using quantum chemistry calculation, and first elaborated the specific reaction mechanisms of chloroalkenyl peroxy radicals with HO₂/NO and the formation of 2-methylbut-3-enal, highlighting their important roles in the SOA formation. For the initial reactions, Cl additions to terminal carbons and H abstraction from CH₃ moiety of isoprene are the predominant reactions, which is consistent with previous research. Following the initial reactions, their subsequent reactions with O₂ and HO₂ (or NO) under different atmospheric conditions could lead to the formation of 17 highly oxidized molecules (HOMs), of which P10, P12, P16, P17, P19 and P33 generated by the subsequent reactions of the major first-generation products (MVK, CMBO, CMBA and MBO) have been detected in the reaction process of isoprene with Cl in the chamber experiment. In addition to auto-oxidation process, the reaction of chloroalkenyl peroxy radicals with HO₂/NO and their subsequent reactions are all easy to occur under atmospheric conditions, which could be crucial contributors to the formation of HOMs and SOA arising from the Cl initiated oxidation of isoprene. This study would be conducive to clarifying the atmospheric oxidation process of isoprene initiated by Cl and providing a new understanding of its SOA formation.

Ozonolysis of Permethrin in the Atmosphere: Mechanism, Kinetics, and Evaluation of Toxicity

Pyrethroid, a pesticide widely used worldwide, could mimic, block, or synergize the effects of endogenous hormones in humans or mammals after entering into the atmosphere and after being sprayed and applied in large quantities. This research aims to study the mechanism, kinetics, and eco-toxicity evaluation of the ozonolysis of permethrin (PER)-one of the typical pyrethroid (type I) pesticides. Existing experimental studies only predicted that ozonolysis of PER could generate a cycloperoxy analogue of PER (IM13-1-11), and the reaction mechanism has not yet been completed. To make up for the lack of experimental results, the 13 primary reaction pathways of PER and ozone, as well as the subsequent reactions of Criegee intermediates with small molecules such as NOx, COx, SO2, and O2, have been studied to propose new reaction paths by quantum chemical calculations in this work. We calculated the total reaction rate constant of PER and ozone at 298 K and 1 atm based on the calculated thermodynamic data and the transition state theory (TST), which was compared with the experimental values to prove the reliability of our results. Based on the quantitative structure and activity relationship, we predicted the acute and chronic toxicity of PER and its products of ozonolysis to three representative organisms-fish, daphnia, and green algae to avoid animal experiments. The results show that ozonolysis products of PER are still extremely harmful to the environment and should be taken seriously, although the products have less toxicity than PER.

Theoretical study of the formation and nucleation mechanism of highly oxygenated multi-functional organic compounds produced by α-pinene

In recent years, highly oxygenated organic molecules (HOMs) derived from photochemical reactions of α-pinene, the most abundant monoterpene, have been considered as important precursors of biogenic particles. However, the specific reactions of HOMs remain largely unknown, especially the corresponding formation and nucleation mechanism in the nanoscale. In this study, we implemented quantum chemical calculations and molecular dynamics (MD) simulations to explore the mechanism of the formation of HOM monomers/dimers by ozonolysis and autoxidation of α-pinene. Furthermore, we investigated the mechanisms of HOMs with different oxygen-to‑carbon (O/C) ratios and functional groups participating in neutral and ion-induced nucleation. The results show that the formation of HOMs is hardly affected by water, sulfuric acid and ions. In the ion-induced nucleation, HOM can dominate the initial nucleation steps; however, in the neutral nucleation, HOMs are more likely to participate in the growth stage. In addition, the nucleation ability of HOM has a bearing on the O/C ratio and the types of the functional groups. The current calculations provide valuable insight into the formation mechanism of the pure organic particles at low sulfuric acid concentrations.

Autoxidation mechanism for atmospheric oxidation of tertiary amines: Implications for secondary organic aerosol formation

Tertiary amines are one kind of identified amines in the atmosphere. Here, the atmospheric oxidation mechanism and kinetics of tertiary amines were investigated by using computational methods. As proxies of these amines, trimethylamine (TMA) and triethylamine (TEA) have been selected. Results indicate that N-containing peroxy radicals (NRO₂⋅), which are key intermediates in ⋅OH initiated oxidation of TMA and TEA, can follow a so-called autoxidation mechanism (a chain reaction of H-shift followed by O₂ addition) even on the condition of high NO/HO₂⋅ concentration. Such unique mechanism can be ascribed to the ability of N-atom in facilitating the unimolecular H-shift of NRO₂⋅ and the absence of H-atoms on N-atom. However, different from TMA reaction system, the pathway dissociating into fragmental products can compete with the autoxidation pathway for TEA system. More importantly, TEA reaction system cannot lead to the formation of products with high O/C ratio due to the autoxidation pathway terminated by the release of fragmental molecules. Such difference can be corroborated by previously observing lower secondary organic aerosol yield of TEA oxidation than that of TMA oxidation. The unveiled mechanism enhances current understanding on atmospheric fate of amines and autoxidation mechanism.

Atmospheric Chemistry of Allylic Radicals from Isoprene: A Successive Cyclization-Driven Autoxidation Mechanism

The atmospheric chemistry of isoprene has broad implications for regional air quality and the global climate. Allylic radicals, taking 13-17% yield in the isoprene oxidation by ^•Cl, can contribute as much as 3.6-4.9% to all possible formed intermediates in local regions at daytime. Considering the large quantity of isoprene emission, the chemistry of the allylic radicals is therefore highly desirable. Here, we investigated the atmospheric oxidation mechanism of the allylic radicals using quantum chemical calculations and kinetics modeling. The results indicate that the allylic radicals can barrierlessly combine with O₂ to form peroxy radicals (RO₂^•). Under ≤100 ppt NO and ≤50 ppt HO₂^• conditions, the formed RO₂^• mainly undergo two times "successive cyclization and O₂ addition" to finally form the product fragments 2-alkoxy-acetaldehyde (C₂H₃O₂^•) and 3-hydroperoxy-2-oxopropanal (C₃H₄O₄). The presented reaction illustrates a novel successive cyclization-driven autoxidation mechanism. The formed 3-hydroperoxy-2-oxopropanal product is a new isomer of the atmospheric C₃H₄O₄ family and a potential aqueous-phase secondary organic aerosol precursor. Under >100 ppt NO condition, NO can mediate the cyclization-driven autoxidation process to form C₅H₇NO₃, C₅H₇NO₇, and alkoxy radical-related products. The proposed novel autoxidation mechanism advances our current understanding of the atmospheric chemistry of both isoprene and RO₂^•.

Biogenic secondary organic aerosols: A review on formation mechanism, analytical challenges and environmental impacts

The review initiates with current state of information on the atmospheric reaction mechanism of biogenic volatile organic compounds (BVOCs) and its fate in the atmosphere. The plants release BVOCs, i.e., isoprene, monoterpenes, and sesquiterpenes, which form secondary organic aerosols (SOA) upon oxidation. These oxidation reactions are primarily influenced by solar radiations along with other meteorological parameters viz.; temperature and relative humidity, therefore, the chemistry behind SOA formation is different during day than the night time. The review throws light upon the day and nighttime formation mechanism of SOA, recent advancements in the analytical techniques available for the measurements, and its impact on the environment. Studies have revealed that day time SOA formation is dominated by OH and O₃, however, NOx initiated SOA production is dominated during night. The formation mechanism addresses that the gaseous products of VOCs are firstly formed and then partitioned over the pre-existing particles. New particle formation and biomass-derived aerosols are found to be responsible for enhanced SOA formation. 2-Dimensional gas chromatography-mass spectrometer (2D-GC/MS) is observed to be best for the analysis of organic aerosols. Radiative forcing (RF) SOA is observed to be a useful parameter to evaluate the environmental impacts of SOA and reviewed studies have shown mean RF in the ranges of -0.27 to +0.20 W m^-2.

Formation of Low-Volatile Products and Unexpected High Formaldehyde Yield from the Atmospheric Oxidation of Methylsiloxanes

With stricter regulation of atmospheric volatile organic compounds (VOCs) originating from fossil fuel-based vehicles and industries, the use of volatile chemical products (VCPs) and the transformation mechanism of VCPs have become increasingly important to quantify air quality. Volatile methylsiloxanes (VMS) are an important class of VCPs and high-production chemicals. Using quantum chemical calculations and kinetics modeling, we investigated the reaction mechanism of peroxy radicals of VMS, which are key intermediates in determining the atmospheric chemistry of VMS. L2-RSiCH₂O₂^• and D3-RSiCH₂O₂^• derived from hexamethyldisiloxane and hexamethylcyclotrisiloxane, respectively, were selected as representative model systems. The results indicated that L2-RSiCH₂O₂^• and D3-RSiCH₂O₂^• follow a novel Si-C-O rearrangement-driven autoxidation mechanism, leading to the formation of low volatile silanols and high yield of formaldehyde at low NO/HO₂^• conditions. At high NO/HO₂^• conditions, L2-RSiCH₂O₂^• and D3-RSiCH₂O₂^• react with NO/HO₂^• to form organic nitrate, hydroperoxide, and active alkoxy radicals. The alkoxy radicals further follow a Si-C-O rearrangement step to finally form formate esters. The novel Si-C-O rearrangement mechanism of both peroxy and alkoxy radicals are supported by available experimental studies on the oxidation of VMS. Notably, the high yield of formaldehyde is estimated to significantly contribute to formaldehyde pollution in the indoor environment, especially during indoor cleaning.