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Xuemei X, Kejia D, Weishan L, Tingxu F, Fei L, Xijie W. Indirect influence of soil enzymes and their stoichiometry on soil organic carbon response to warming and nitrogen deposition in the Tibetan Plateau alpine meadow. Front Microbiol 2024; 15:1381891. [PMID: 38694804 PMCID: PMC11061507 DOI: 10.3389/fmicb.2024.1381891] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2024] [Accepted: 03/29/2024] [Indexed: 05/04/2024] Open
Abstract
Despite extensive research on the impact of warming and nitrogen deposition on soil organic carbon components, the response mechanisms of microbial community composition and enzyme activity to soil organic carbon remain poorly understood. This study investigated the effects of warming and nitrogen deposition on soil organic carbon components in the Tibetan Plateau alpine meadow and elucidated the regulatory mechanisms of microbial characteristics, including soil microbial community, enzyme activity, and stoichiometry, on organic carbon components. Results indicated that both warming and nitrogen deposition significantly increased soil organic carbon, readily oxidizable carbon, dissolved organic carbon, and microbial biomass carbon. The interaction between warming and nitrogen deposition influenced soil carbon components, with soil organic carbon, readily oxidizable carbon, and dissolved organic carbon reaching maximum values in the W0N32 treatment, while microbial biomass carbon peaked in the W3N32 treatment. Warming and nitrogen deposition also significantly increased soil Cellobiohydrolase, β-1,4-N-acetylglucosaminidase, leucine aminopeptidase, and alkaline phosphatase. Warming decreased the soil enzyme C: N ratio and C:P ratio but increased the soil enzyme N:P ratio, while nitrogen deposition had the opposite effect. The bacterial Chao1 index and Shannon index increased significantly under warming conditions, particularly in the N32 treatment, whereas there were no significant changes in the fungal Chao1 index and Shannon index with warming and nitrogen addition. Structural equation modeling revealed that soil organic carbon components were directly influenced by the negative impact of warming and the positive impact of nitrogen deposition. Furthermore, warming and nitrogen deposition altered soil bacterial community composition, specifically Gemmatimonadota and Nitrospirota, resulting in a positive impact on soil enzyme activity, particularly soil alkaline phosphatase and β-xylosidase, and enzyme stoichiometry, including N:P and C:P ratios. In summary, changes in soil organic carbon components under warming and nitrogen deposition in the alpine meadows of the Tibetan Plateau primarily depend on the composition of soil bacterial communities, soil enzyme activity, and stoichiometric characteristics.
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Affiliation(s)
| | - De Kejia
- College of Animal Husbandry and Veterinary Science, Qinghai University, Xining, China
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Burke M, Marín-Spiotta E, Ponette-González AG. Black carbon in urban soils: land use and climate drive variation at the surface. CARBON BALANCE AND MANAGEMENT 2024; 19:9. [PMID: 38429441 PMCID: PMC10908174 DOI: 10.1186/s13021-024-00255-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2023] [Accepted: 02/22/2024] [Indexed: 03/03/2024]
Abstract
BACKGROUND Black carbon (BC) encompasses a range of carbonaceous materials--including soot, char, and charcoal--derived from the incomplete combustion of fossil fuels and biomass. Urban soils can become enriched in BC due to proximity to these combustion sources. We conducted a literature review of BC in urban soils globally and found 26 studies reporting BC and total organic carbon (TOC) content collected to a maximum of 578 cm depth in urban soils across 35 cities and 10 countries. We recorded data on city, climate, and land use/land cover characteristics to examine drivers of BC content and contribution to TOC in soil. RESULTS All studies were conducted in the northern hemisphere, with 68% of the data points collected in China and the United States. Surface samples (0-20 cm) accounted for 62% of samples in the dataset. Therefore, we focused our analysis on 0-10 cm and 10-20 cm depths. Urban soil BC content ranged from 0-124 mg/g (median = 3 mg/g) at 0-10 cm and from 0-53 mg/g (median = 2.8 mg/g) at 10-20 cm depth. The median proportional contribution of BC to TOC was 23% and 15% at 0-10 cm and 10-20 cm, respectively. Surface soils sampled in industrial land use and near roads had the highest BC contents and proportions, whereas samples from residential sites had among the lowest. Soil BC content decreased with mean annual soil temperature. CONCLUSIONS Our review indicates that BC comprises a major fraction (nearly one quarter) of the TOC in urban surface soils, yet sampling bias towards the surface could hide the potential for BC storage at depth. Land use emerged as an importer driver of soil BC contents and proportions, whereas land cover effects remain uncertain. Warmer and wetter soils were found to have lower soil BC than cooler and drier soils, differences that likely reflect soil BC loss mechanisms. Additional research on urban soil BC at depth and from diverse climates is critical to better understand the role of cities in the global carbon cycle.
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Affiliation(s)
- Molly Burke
- Department of Geography and the Environment, University of North Texas, 1155 Union Circle #305279, Denton, TX, 76203, USA
- Department of Geography, University of Utah, Salt Lake City, UT, 84112, USA
| | - Erika Marín-Spiotta
- Department of Geography, University of Wisconsin-Madison, 550 North Park Street, Madison, WI, 53706, USA
| | - Alexandra G Ponette-González
- Department of Geography and the Environment, University of North Texas, 1155 Union Circle #305279, Denton, TX, 76203, USA.
- Department of City and Metropolitan Planning, University of Utah, Salt Lake City, UT, 84112, USA.
- Natural History Museum of Utah, University of Utah, Salt Lake City, UT, 84108, USA.
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Xue P, Minasny B, Wadoux AMJC, Dobarco MR, McBratney A, Bissett A, de Caritat P. Drivers and human impacts on topsoil bacterial and fungal community biogeography across Australia. GLOBAL CHANGE BIOLOGY 2024; 30:e17216. [PMID: 38429628 DOI: 10.1111/gcb.17216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/12/2023] [Revised: 02/05/2024] [Accepted: 02/17/2024] [Indexed: 03/03/2024]
Abstract
Soil microbial diversity mediates a wide range of key processes and ecosystem services influencing planetary health. Our knowledge of microbial biogeography patterns, spatial drivers and human impacts at the continental scale remains limited. Here, we reveal the drivers of bacterial and fungal community distribution in Australian topsoils using 1384 soil samples from diverse bioregions. Our findings highlight that climate factors, particularly precipitation and temperature, along with soil properties, are the primary drivers of topsoil microbial biogeography. Using random forest machine-learning models, we generated high-resolution maps of soil bacteria and fungi across continental Australia. The maps revealed microbial hotspots, for example, the eastern coast, southeastern coast, and west coast were dominated by Proteobacteria and Acidobacteria. Fungal distribution is strongly influenced by precipitation, with Ascomycota dominating the central region. This study also demonstrated the impact of human modification on the underground microbial community at the continental scale, which significantly increased the relative abundance of Proteobacteria and Ascomycota, but decreased Chloroflexi and Basidiomycota. The variations in microbial phyla could be attributed to distinct responses to altered environmental factors after human modifications. This study provides insights into the biogeography of soil microbiota, valuable for regional soil biodiversity assessments and monitoring microbial responses to global changes.
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Affiliation(s)
- Peipei Xue
- The University of Sydney, Sydney, New South Wales, Australia
| | - Budiman Minasny
- The University of Sydney, Sydney, New South Wales, Australia
| | - Alexandre M J-C Wadoux
- LISAH, University of Montpellier, AgroParisTech, INRAE, IRD, L'Institut Agro, Montpellier, France
| | | | - Alex McBratney
- The University of Sydney, Sydney, New South Wales, Australia
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Fu Q, Qiu Y, Zhao J, Li J, Xie S, Liao Q, Fu X, Huang Y, Yao Z, Dai Z, Qiu Y, Yang Y, Li F, Chen H. Monotonic trends of soil microbiomes, metagenomic and metabolomic functioning across ecosystems along water gradients in the Altai region, northwestern China. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:169351. [PMID: 38123079 DOI: 10.1016/j.scitotenv.2023.169351] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/10/2023] [Revised: 11/21/2023] [Accepted: 12/11/2023] [Indexed: 12/23/2023]
Abstract
To investigate microbial communities and their contributions to carbon and nutrient cycling along water gradients can enhance our comprehension of climate change impacts on ecosystem services. Thus, we conducted an assessment of microbial communities, metagenomic functions, and metabolomic profiles within four ecosystems, i.e., desert grassland (DG), shrub-steppe (SS), forest (FO), and marsh (MA) in the Altai region of Xinjiang, China. Our results showed that soil total carbon (TC), total nitrogen, NH4+, and NO3- increased, but pH decreased with soil water gradients. Microbial abundances and richness also increased with soil moisture except the abundances of fungi and protists being lowest in MA. A shift in microbial community composition is evident along the soil moisture gradient, with Proteobacteria, Basidiomycota, and Evosea proliferating but a decline in Actinobacteria and Cercozoa. The β-diversity of microbiomes, metagenomic, and metabolomic functioning were correlated with soil moisture gradients and have significant associations with specific soil factors of TC, NH4+, and pH. Metagenomic functions associated with carbohydrate and DNA metabolisms, as well as phages, prophages, TE, plasmids functions diminished with moisture, whereas the genes involved in nitrogen and potassium metabolism, along with certain biological interactions and environmental information processing functions, demonstrated an augmentation. Additionally, MA harbored the most abundant metabolomics dominated by lipids and lipid-like molecules and organic oxygen compounds, except certain metabolites showing decline trends along water gradients, such as N'-Hydroxymethylnorcotinine and 5-Hydroxyenterolactone. Thus, our study suggests that future ecosystem succession facilitated by changes in rainfall patterns will significantly alter soil microbial taxa, functional potential, and metabolite fractions.
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Affiliation(s)
- Qi Fu
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Yingbo Qiu
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Jiayi Zhao
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Jiaxin Li
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Siqi Xie
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Qiuchang Liao
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Xianheng Fu
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Yu Huang
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Zhiyuan Yao
- School of Civil and Environmental Engineering, Ningbo University, Ningbo, Zhejiang 315211, China
| | - Zhongmin Dai
- Institute of Soil and Water Resources and Environmental Science, College of Environmental and Resource Sciences, Zhejiang University, Hangzhou, Zhejiang 310058, China
| | - Yunpeng Qiu
- College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, Jiangsu 210095, China
| | - Yuchun Yang
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China
| | - Furong Li
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China.
| | - Huaihai Chen
- State Key Laboratory of Biocontrol, School of Ecology, Shenzhen Campus of Sun Yat-sen University Sun Yat-sen University, Shenzhen, Guangdong 518107, China.
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Silva I, Alves M, Malheiro C, Silva ARR, Loureiro S, Henriques I, González-Alcaraz MN. Structural and Functional Shifts in the Microbial Community of a Heavy Metal-Contaminated Soil Exposed to Short-Term Changes in Air Temperature, Soil Moisture and UV Radiation. Genes (Basel) 2024; 15:107. [PMID: 38254996 PMCID: PMC10815596 DOI: 10.3390/genes15010107] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2023] [Revised: 01/11/2024] [Accepted: 01/14/2024] [Indexed: 01/24/2024] Open
Abstract
The interplay between metal contamination and climate change may exacerbate the negative impact on the soil microbiome and, consequently, on soil health and ecosystem services. We assessed the response of the microbial community of a heavy metal-contaminated soil when exposed to short-term (48 h) variations in air temperature, soil humidity or ultraviolet (UV) radiation in the absence and presence of Enchytraeus crypticus (soil invertebrate). Each of the climate scenarios simulated significantly altered at least one of the microbial parameters measured. Irrespective of the presence or absence of invertebrates, the effects were particularly marked upon exposure to increased air temperature and alterations in soil moisture levels (drought and flood scenarios). The observed effects can be partly explained by significant alterations in soil properties such as pH, dissolved organic carbon, and water-extractable heavy metals, which were observed for all scenarios in comparison to standard conditions. The occurrence of invertebrates mitigated some of the impacts observed on the soil microbial community, particularly in bacterial abundance, richness, diversity, and metabolic activity. Our findings emphasize the importance of considering the interplay between climate change, anthropogenic pressures, and soil biotic components to assess the impact of climate change on terrestrial ecosystems and to develop and implement effective management strategies.
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Affiliation(s)
- Isabel Silva
- CEF (Center for Functional Ecology), Associate Laboratory TERRA, Department of Life Sciences, Faculty of Sciences and Technology, University of Coimbra, 3000-456 Coimbra, Portugal;
- CESAM (Centre for Marine and Environmental Studies), Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal; (C.M.); (A.R.R.S.); (S.L.)
| | - Marta Alves
- CBQF (Center for Biotechnology and Fine Chemistry), School of Biotechnology, Portuguese Catholic University, 4169-005 Porto, Portugal;
| | - Catarina Malheiro
- CESAM (Centre for Marine and Environmental Studies), Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal; (C.M.); (A.R.R.S.); (S.L.)
| | - Ana Rita R. Silva
- CESAM (Centre for Marine and Environmental Studies), Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal; (C.M.); (A.R.R.S.); (S.L.)
| | - Susana Loureiro
- CESAM (Centre for Marine and Environmental Studies), Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal; (C.M.); (A.R.R.S.); (S.L.)
| | - Isabel Henriques
- CEF (Center for Functional Ecology), Associate Laboratory TERRA, Department of Life Sciences, Faculty of Sciences and Technology, University of Coimbra, 3000-456 Coimbra, Portugal;
| | - M. Nazaret González-Alcaraz
- CESAM (Centre for Marine and Environmental Studies), Department of Biology, University of Aveiro, 3810-193 Aveiro, Portugal; (C.M.); (A.R.R.S.); (S.L.)
- Department of Agricultural Engineering of the E.T.S.I.A., Technical University of Cartagena, 30203 Cartagena, Spain
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Wang Z, Solanki MK, Kumar A, Solanki AC, Pang F, Ba ZX, Niu JQ, Ren ZX. Promoting plant resilience against stress by engineering root microenvironment with Streptomyces inoculants. Microbiol Res 2023; 277:127509. [PMID: 37788547 DOI: 10.1016/j.micres.2023.127509] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 09/24/2023] [Accepted: 09/26/2023] [Indexed: 10/05/2023]
Abstract
Plant growth is directly influenced by biotic and abiotic stress factors resulting from environmental changes. Plant growth-promoting rhizobacteria (PGPR) have become a crucial area of research aimed at addressing these challenges. However, a knowledge gap exists regarding how PGPR impacts the microenvironments surrounding plant roots. The purpose of this study is to elucidate the effects of two distinct PGPR strains, Streptomyces griseorubiginosus BTU6 (known for its resistance to smut disease) and S. chartreusis WZS021, on sugarcane roots. Additionally, we compare the resultant modifications in the physicochemical characteristics of the rhizospheric soil and root architecture. The results reveal that following the inoculation of S. chartreusis WZS021, there was a significant increase in the active chemicals associated with nitrogen metabolism in sugarcane roots. This enhancement led to a substantial enrichment of nitrogen-cycling microbes like Pseudomonas and Gemmatimona. This finding supports earlier research indicating that S. chartreusis WZS021 enhances sugarcane's capacity to utilize nitrogen effectively. Furthermore, after treatment with S. chartreusis, Aspergillus became the predominant strain among endophytic fungi, resulting in alterations to their community structure that conferred drought resistance. In contrast, the relative abundance of Xanthomonas in the root environment decreased following inoculation with S. griseorubiginosus. Instead, Gemmatimona became more prevalent, creating a favorable environment for plants to bolster their resistance against disease. Notably, inoculations with S. chartreusis WZS021 and S. griseorubiginosus BTU6 led to substantial changes in the chemical composition, enzymatic activity, and microbial community composition in the soil surrounding sugarcane roots. However, there were distinct differences in the specific alterations induced by each strain. These findings enhance plant resilience to stress by shedding light on PGPR-mediated modifications in root microenvironments.
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Affiliation(s)
- Zhen Wang
- Guangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Agricultural College, Yulin Normal University, Yulin 537000, China
| | - Manoj Kumar Solanki
- Department of Life Sciences and Biological Sciences, IES University, Bhopal, Madhya Pradesh, India; Plant Cytogenetics and Molecular Biology Group, Institute of Biology, Biotechnology and Environmental Protection, Faculty of Natural Sciences, University of Silesia in Katowice, Katowice, Poland
| | - Ajay Kumar
- Amity Institute of Biotechnology, Amity University, Sector-125, Noida, Uttar Pradesh 201313, India
| | - Anjali Chandrol Solanki
- Department of Agriculture, Mansarover Global University, Bhopal, Madhya Pradesh 462042, India
| | - Fei Pang
- Guangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Agricultural College, Yulin Normal University, Yulin 537000, China
| | - Zi-Xuan Ba
- Guangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Agricultural College, Yulin Normal University, Yulin 537000, China
| | - Jun-Qi Niu
- Guangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Agricultural College, Yulin Normal University, Yulin 537000, China.
| | - Zhen-Xin Ren
- Guangxi Key Laboratory of Agricultural Resources Chemistry and Biotechnology, Agricultural College, Yulin Normal University, Yulin 537000, China.
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Gao D, Li F, Gao W, Zeng Q, Liang H. Greenhouse gas fluxes from different types of permafrost regions in the Daxing'an Mountains, Northeast China. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:97578-97590. [PMID: 37596475 DOI: 10.1007/s11356-023-29262-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Accepted: 08/06/2023] [Indexed: 08/20/2023]
Abstract
Global warming will increase the greenhouse gas (GHG) fluxes of permafrost regions. However, little is known about the difference in GHG fluxes among different types of permafrost regions. In this study, we used the static opaque chamber and gas chromatography techniques to determine the fluxes of carbon dioxide (CO2), methane (CH4), and nitrous oxide (N2O) in predominantly continuous permafrost (PCP), predominantly continuous and island permafrost (PCIP), and sparsely island permafrost (SIP) regions during the growing season. The main factors causing differences in GHG fluxes among three types of permafrost regions were also analyzed. The results showed mean CO2 fluxes in SIP were significantly higher than that in PCP and PCIP, which were 342.10 ± 11.46, 105.50 ± 10.65, and 127.15 ± 14.27 mg m-2 h-1, respectively. This difference was determined by soil temperature, soil moisture, total organic carbon (TOC), nitrate nitrogen (NO3--N), and ammonium nitrogen (NH4+-N) content. Mean CH4 fluxes were -26.47 ± 48.83 (PCP), 118.35 ± 46.93 (PCIP), and 95.52 ± 32.86 μg m-2 h-1 (SIP). Soil temperature, soil moisture, and TOC content were the key factors to determine whether permafrost regions were CH4 sources or sinks. Similarly, PCP behaved as the sink of N2O, PCIP and SIP behaved as the source of N2O. Mean N2O fluxes were -3.90 ± 1.71, 0.78 ± 1.55, and 3.78 ± 1.59 μg m-2 h-1, respectively. Soil moisture and TOC content were the main factors influencing the differences in N2O fluxes among the three permafrost regions. This study clarified and explained the differences in GHG fluxes among three types of permafrost regions, providing a data basis for such studies.
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Affiliation(s)
- Dawen Gao
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, 100044, China.
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-Construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, 100044, China.
| | - Feng Li
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, 100044, China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-Construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, 100044, China
| | - Weifeng Gao
- Institute of Grassland Science, Key Laboratory of Vegetation Ecology of the Ministry of Education, Jilin Songnen Grassland Ecosystem National Observation and Research Station, Northeast Normal University, Changchun, 130024, China
| | - Qingbo Zeng
- State Key Laboratory of Urban Water Resource and Environment, Harbin Institute of Technology, Harbin, 150001, China
| | - Hong Liang
- Centre for Urban Environmental Remediation, Beijing University of Civil Engineering and Architecture, Beijing, 100044, China
- Beijing Energy Conservation & Sustainable Urban and Rural Development Provincial and Ministry Co-Construction Collaboration Innovation Center, Beijing University of Civil Engineering and Architecture, Beijing, 100044, China
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Qi J, Fu D, Wang X, Zhang F, Ma C. The effect of alfalfa cultivation on improving physicochemical properties soil microorganisms community structure of grey desert soil. Sci Rep 2023; 13:13747. [PMID: 37612457 PMCID: PMC10447519 DOI: 10.1038/s41598-023-41005-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2023] [Accepted: 08/20/2023] [Indexed: 08/25/2023] Open
Abstract
Planting alfalfa in grey desert soil can have significant effects on soil nutrient levels, microbial communities, and overall soil improvement. High-throughput sequencing technology was used to explore the relationship between the rhizosphere microbial community structure of grey desert soil planted with different alfalfa varieties (Aohan, WL525HQ, Knight2, Kangsai, Victoria, and WL712), alfalfa characteristics and rhizosphere soil physicochemical properties. Alfalfa planting increased the nitrogen and organic matter in the grey desert soil, and the effects in Victoria, Kangsai, and Aohan were relatively better than those in the unplanted areas and other alfalfa areas. The Chao1 and Shannon indexes showed that the diversity and relative abundance of bacteria and fungi in Kangsai were significantly higher than those in the unplanted areas and other alfalfa areas. Redundancy analysis showed that available nitrogen and phosphorus, as well as fresh weight, significantly affected the changes in fungal and bacterial communities. Variance partitioning analysis showed that soil and alfalfa growth characteristics explained 50.04% and 51.58% of the structural changes in the bacteria and fungi, respectively. Therefore, planting alfalfa changed the community structure of bacteria and fungi, as well as the content of soil nutrients, and different varieties of alfalfa had different effects on soil improvement.
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Affiliation(s)
- Jiangjiao Qi
- College of Animal Science & Technology, Shihezi University, Shihezi, 832003, Xinjiang, China
| | - Dongqing Fu
- College of Animal Science & Technology, Shihezi University, Shihezi, 832003, Xinjiang, China
| | - Xuzhe Wang
- College of Animal Science & Technology, Shihezi University, Shihezi, 832003, Xinjiang, China
| | - Fanfan Zhang
- College of Animal Science & Technology, Shihezi University, Shihezi, 832003, Xinjiang, China
| | - Chunhui Ma
- College of Animal Science & Technology, Shihezi University, Shihezi, 832003, Xinjiang, China.
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9
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Bai T, Wang P, Qiu Y, Zhang Y, Hu S. Nitrogen availability mediates soil carbon cycling response to climate warming: A meta-analysis. GLOBAL CHANGE BIOLOGY 2023; 29:2608-2626. [PMID: 36744998 DOI: 10.1111/gcb.16627] [Citation(s) in RCA: 8] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Accepted: 01/10/2023] [Indexed: 05/31/2023]
Abstract
Global climate warming may induce a positive feedback through increasing soil carbon (C) release to the atmosphere. Although warming can affect both C input to and output from soil, direct and convincing evidence illustrating that warming induces a net change in soil C is still lacking. We synthesized the results from field warming experiments at 165 sites across the globe and found that climate warming had no significant effect on soil C stock. On average, warming significantly increased root biomass and soil respiration, but warming effects on root biomass and soil respiration strongly depended on soil nitrogen (N) availability. Under high N availability (soil C:N ratio < 15), warming had no significant effect on root biomass, but promoted the coupling between effect sizes of root biomass and soil C stock. Under relative N limitation (soil C:N ratio > 15), warming significantly enhanced root biomass. However, the enhancement of root biomass did not induce a corresponding C accumulation in soil, possibly because warming promoted microbial CO2 release that offset the increased root C input. Also, reactive N input alleviated warming-induced C loss from soil, but elevated atmospheric CO2 or precipitation increase/reduction did not. Together, our findings indicate that the relative availability of soil C to N (i.e., soil C:N ratio) critically mediates warming effects on soil C dynamics, suggesting that its incorporation into C-climate models may improve the prediction of soil C cycling under future global warming scenarios.
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Affiliation(s)
- Tongshuo Bai
- Ecosystem Ecology Laboratory, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Peng Wang
- Ecosystem Ecology Laboratory, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Yunpeng Qiu
- Ecosystem Ecology Laboratory, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Yi Zhang
- Ecosystem Ecology Laboratory, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
| | - Shuijin Hu
- Ecosystem Ecology Laboratory, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China
- Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, North Carolina, USA
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10
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Effect of Drought on the Development of Deschampsia caespitosa (L.) and Selected Soil Parameters during a Three-Year Lysimetric Experiment. Life (Basel) 2023; 13:life13030745. [PMID: 36983899 PMCID: PMC10055780 DOI: 10.3390/life13030745] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 03/02/2023] [Accepted: 03/06/2023] [Indexed: 03/12/2023] Open
Abstract
This work presents results from a field experiment which was focused on the impact of the drought period on microbial activities in rhizosphere and non-rhizosphere soil. To demonstrate the effect of drought, the pot experiment lasted from 2012 to 2015. Fifteen lysimeters (plastic containers) were prepared in our area of interest. These lysimeters were filled with the subsoil and topsoil from this area and divided into two groups. The first group consisted of two variants: V1 (control) and V2 (84 kg N/ha), which were not stressed by drought. The second group consisted of three variants, V3 (control), V4 (84 kg N/ha), and V5 (84 kg N/ha + 1.25 L lignohumate/ha), which were stressed by drought every year of the experiment for 30 days. Changes in the soil moisture content caused by drought significantly affect the growth of Deschampsia caespitosa L., the microbial activity, and the soil’s capacity to retain nutrients. The measured basal respiration and dehydrogenase activity values confirm the significant effect of drought on microbial activity. These values were demonstrably higher in the period before drought simulation by more than 60%. On the other hand, significant differences between microbial activities in the rhizosphere and non-rhizosphere soil were not found. We did not find a clear effect of drought on the formation of soil water repellency.
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Zhang Z, Li Y, Williams RA, Chen Y, Peng R, Liu X, Qi Y, Wang Z. Responses of soil respiration and its sensitivities to temperature and precipitation: A meta-analysis. ECOL INFORM 2023. [DOI: 10.1016/j.ecoinf.2023.102057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/13/2023]
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12
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Luo L, Yu J, Zhu L, Gikas P, He Y, Xiao Y, Deng S, Zhang Y, Zhang S, Zhou W, Deng O. Nitrogen addition may promote soil organic carbon storage and CO 2 emission but reduce dissolved organic carbon in Zoige peatland. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2022; 324:116376. [PMID: 36208518 DOI: 10.1016/j.jenvman.2022.116376] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 09/22/2022] [Accepted: 09/24/2022] [Indexed: 06/16/2023]
Abstract
With the increase of nitrogen (N) deposition, N input can affect soil C cycling since microbes may trigger a series of activities to balance the supply and demand of nutrients. However, as one of the largest C sinks on earth, the role of extra N addition in affecting peatland soil C and its potential mechanism remains unclear and debated. Therefore, this study chose the largest peatland in China (i.e., Zoige, mostly N-limited) to systematically explore the potential changes of soil C, microbes, and ecoenzymes caused by extra N input at the lab scale incubation. Three different types of soils were collected and incubated with different levels of NH4NO3 solution for 45 days. After incubation, N input generally increased soil organic C (SOC) but decreased dissolved organic carbon (DOC) in Zoige peatland soils. Moreover, CO2 and CH4 emissions were significantly increased after high N input (equal to 5 mg NH4NO3 g-1 dry soils). Through a series of analyses, it was observed that microbial communities and ecoenzyme activities mainly influenced the changes of different C components. Collectively, this study implied that the increasing N deposition might help C sequestration in N-limited peatland soils; simultaneously, the risk of increased CO2 and CH4 by N input in global warming should not be ignored.
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Affiliation(s)
- Ling Luo
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Jianlan Yu
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Lingyao Zhu
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Petros Gikas
- School of Chemical and Environmental Engineering, Technical University of Crete, Chania, 73100, Greece
| | - Yan He
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Yinlong Xiao
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Shihuai Deng
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Yanzong Zhang
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Shirong Zhang
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Wei Zhou
- College of Resources, Sichuan Agricultural University, Chengdu, 611130, PR China
| | - Ouping Deng
- College of Environmental Sciences, Sichuan Agricultural University, Chengdu, 611130, PR China; College of Resources, Sichuan Agricultural University, Chengdu, 611130, PR China.
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Yang X, Li Y, Niu B, Chen Q, Hu Y, Yang Y, Song L, Wang J, Zhang G. Temperature and Precipitation Drive Elevational Patterns of Microbial Beta Diversity in Alpine Grasslands. MICROBIAL ECOLOGY 2022; 84:1141-1153. [PMID: 34694450 DOI: 10.1007/s00248-021-01901-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2021] [Accepted: 10/11/2021] [Indexed: 06/13/2023]
Abstract
Understanding the mechanisms underlying biodiversity patterns is a central issue in ecology, while how temperature and precipitation jointly control the elevational patterns of microbes is understudied. Here, we studied the effects of temperature, precipitation and their interactions on the alpha and beta diversity of soil archaea and bacteria in alpine grasslands along an elevational gradient of 4300-5200 m on the Tibetan Plateau. Alpha diversity was examined on the basis of species richness and evenness, and beta diversity was quantified with the recently developed metric of local contributions to beta diversity (LCBD). Typical alpine steppe and meadow ecosystems were distributed below and above 4850 m, respectively, which was consistent with the two main constraints of mean annual temperature (MAT) and mean annual precipitation (MAP). Species richness and evenness showed decreasing elevational patterns in archaea and nonsignificant or U-shaped patterns in bacteria. The LCBD of both groups exhibited significant U-shaped elevational patterns, with the lowest values occurring at 4800 m. For the three diversity metrics, soil pH was the primary explanatory variable in archaea, explaining over 20.1% of the observed variation, whereas vegetation richness, total nitrogen and the K/Al ratio presented the strongest effects on bacteria, with relative importance values of 16.1%, 12.5% and 11.6%, respectively. For the microbial community composition of both archaea and bacteria, the moisture index showed the dominant effect, explaining 17.6% of the observed variation, followed by MAT and MAP. Taken together, temperature and precipitation exerted considerable indirect effects on microbial richness and evenness through local environmental and energy supply-related variables, such as vegetation richness, whereas temperature exerted a larger direct influence on LCBD and the community composition. Our findings highlighted the profound influence of temperature and precipitation interactions on microbial beta diversity in alpine grasslands on the Tibetan Plateau.
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Affiliation(s)
- Xiaoqin Yang
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Yue Li
- China University of Geosciences, Beijing, 100083, China
| | - Bin Niu
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
- University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Qiuyu Chen
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
- Key Laboratory of Alpine Ecology, CAS Center for Excellence in Tibetan Plateau Earth Sciences and Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
| | - Yilun Hu
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
- Key Laboratory of Alpine Ecology, CAS Center for Excellence in Tibetan Plateau Earth Sciences and Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
| | - Yibo Yang
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
| | - Lili Song
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
| | - Jianjun Wang
- State Key Laboratory of Lake Science and Environment, Nanjing Institute of Geography and Limnology, Chinese Academy of Sciences, Nanjing, 210008, China.
| | - Gengxin Zhang
- State Key Laboratory of Tibetan Plateau Earth System, Resources and Environment (TPESRE), Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China.
- Key Laboratory of Alpine Ecology, CAS Center for Excellence in Tibetan Plateau Earth Sciences and Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China.
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Li X, Yan Y, Lu X, Fu L, Liu Y. Responses of soil bacterial communities to precipitation change in the semi-arid alpine grassland of Northern Tibet. FRONTIERS IN PLANT SCIENCE 2022; 13:1036369. [PMID: 36325540 PMCID: PMC9619073 DOI: 10.3389/fpls.2022.1036369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Accepted: 09/26/2022] [Indexed: 06/16/2023]
Abstract
A change in precipitation can profoundly change the structure of soil microbial communities, especially in arid and semi-arid areas which are limited by moisture conditions. Therefore, it is crucial to explore how soil bacterial community composition and diversity will respond to variation in precipitation. Here we conducted a precipitation control experiment to simulate precipitation change by reducing and increasing rainfall by 25%, 50%, and 75% in the alpine grasslands of northern Tibet. The composition, diversity, and species interaction network of soil microbial community were studied by high-throughput sequencing, and the relationship between microbial community species and soil environmental factors was analyzed. Our results showed that Proteobacteria (45%-52%) and Actinobacteria (37%-45%) were the dominant bacteria in the soil. The alpha diversity index based on Shannon, Chao1, and Simpson indices revealed that precipitation change had no significant effect on richness and evenness of soil microbial communities. Non-metric multidimensional scaling (NMDS) and analysis of similarities (ANOSIM) showed that a clear separation of soil microbial communities between D2(-50%),D3(-75%) and W2(+50%), W3(+75%) treatments. The microbial interaction network indicated that the water-increasing treatment group had closer connections, and Proteobacteria and Actinomycetes were the core species. Furthermore, there was a stronger positive correlation between species in the water-reducing treatment group, the contribution of Proteobacteria decreased significantly, the role of connecting hub decreased, and Actinomycetes became the most important core microbial species. In addition, soil water content (SWC) and available phosphorus (AP) were closely related to the variations in soil microbial compositions. The findings of this study provide a theoretical basis for the driving mechanism of global climate change on soil microbial community and grassland ecosystem in alpine grassland.
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Affiliation(s)
- Xueqin Li
- Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China
- University of the Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China
| | - Yan Yan
- Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China
| | - Xuyang Lu
- Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China
| | - Lijiao Fu
- Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China
- University of the Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China
| | - Yanling Liu
- Key Laboratory of Mountain Surface Processes and Ecological Regulation, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, China
- University of the Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China
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Su W, Han Q, Yang J, Yu Q, Wang S, Wang X, Qu J, Li H. Heavy rainfall accelerates the temporal turnover but decreases the deterministic processes of buried gravesoil bacterial communities. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 836:155732. [PMID: 35526627 DOI: 10.1016/j.scitotenv.2022.155732] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 05/01/2022] [Accepted: 05/02/2022] [Indexed: 06/14/2023]
Abstract
The influences of global climatic change require an understanding of changes in soil microbial communities under precipitation. However, little is known about how soil ("gravesoil") microbial communities associated with corpse decay respond to precipitation. Here, we explored the variations of temporal turnover and assembly in gravesoil bacterial communities in the Qinghai-Tibet Plateau ecosystem via controlled rainfall simulation experiments. In our experiments, rainfall intensity was set to 2.5 and 5 mm/3 days to simulate moderate and heavy rainfall, respectively, and sampling was conducted on the 4th, 11th, 18th, 32nd, 46th and 60th day. Our results showed precipitation significantly altered bacterial abundances and community structures. Analysis of time-decay relationships revealed that precipitation resulted in a divergent succession of gravesoil bacterial community structure and abundance changes of dominant phyla, such as Chloroflexi. Moreover, in the experimental groups, our results suggested that moderate rainfall increased the deterministic processes in the initial and mid periods, whereas heavy rainfall decreased these processes of gravesoil microbial community assembly in every period compared with those in the control group. The dispersal capacity induced by stochastic processes of gravesoil microbial communities decreased over time under moderate rainfall, whereas it initially increased and then decreased under heavy rainfall. This study highlights the influence of heavy rainfall on bacterial communities during corpse decay, which can provide some inferences for predicting changes in soil microbial communities under global climatic change.
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Affiliation(s)
- Wanghong Su
- School of Public Health, Lanzhou University, Lanzhou 730000, China
| | - Qian Han
- School of Public Health, Lanzhou University, Lanzhou 730000, China
| | - Jiawei Yang
- School of Public Health, Lanzhou University, Lanzhou 730000, China
| | - Qiaoling Yu
- School of Public Health, Lanzhou University, Lanzhou 730000, China
| | - Sijie Wang
- School of Public Health, Lanzhou University, Lanzhou 730000, China
| | - Xiaochen Wang
- School of Public Health, Lanzhou University, Lanzhou 730000, China
| | - Jiapeng Qu
- Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, Qinghai 810008, China; Qinghai Provincial Key Laboratory of Restoration Ecology for Cold Region, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining 810008, China.
| | - Huan Li
- School of Public Health, Lanzhou University, Lanzhou 730000, China; Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, Qinghai 810008, China; State Key Laboratory of Grassland Agro-ecosystems, Center for Grassland Microbiome, College of pastoral agriculture science and technology, Lanzhou University, Gansu 730000, China.
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16
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Zhang Y, Heal KV, Shi M, Chen W, Zhou C. Decreasing molecular diversity of soil dissolved organic matter related to microbial community along an alpine elevation gradient. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 818:151823. [PMID: 34808163 DOI: 10.1016/j.scitotenv.2021.151823] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/14/2021] [Revised: 11/14/2021] [Accepted: 11/16/2021] [Indexed: 06/13/2023]
Abstract
Characterization of soil dissolved organic matter (DOM) and understanding of the interactions between soil microbial communities and DOM molecules along elevation gradients in alpine ecosystems are still limited. To unravel these interactions and how they change along alpine elevation gradients, we sampled topsoil in the Sygera Mountains (Tibet, China) at elevations between 3800 and 4600 m. The molecular characteristics of soil DOM were determined using Fourier transform ion cyclotron resonance mass spectrometry (FT-ICR MS) and soil microbial composition was identified by high-throughput sequencing. Among the seven components of DOM, the lignins/CRAM (carboxyl-rich alicyclic molecules)-like structure dominated at all elevations, followed by tannins, while the relative abundance of unstable substances, including lipids, aliphatic/protein, and carbohydrates, was lower. As elevation increased, the molecular diversity, degree of oxidation, aromaticity, and unsaturation of soil DOM decreased. The abundance and diversity of soil bacteria and fungi also generally decreased with elevation. Both bacteria and fungi play an important role in the degradation of DOM molecules, but bacteria appear to have greater degradation ability. Among them, Proteobacteria and Bacteroidetes mainly promote the degradation of lignins/CRAM-like structure molecules, while Basidiomycota mainly degrade more unstable substrates. Co-occurrence network analysis revealed complex correlations between specific microbial groups and DOM molecules. Our results suggest that more active cycling of soil DOM could occur in alpine ecosystems due to climate warming, as the result of increased vegetation productivity and litter input in response to rising temperature promoting the relative abundance of microbial groups capable of degrading lignins/CRAM-like structures in soil DOM.
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Affiliation(s)
- Yanlin Zhang
- Forestry College, Fujian Agriculture and Forestry University, National Positioning Observation Research Station of Red Earth Hilly Ecosystem in Changting, Fujian, 350002, Fujian Province, China
| | - Kate V Heal
- School of GeoSciences, The University of Edinburgh, Crew Building, Alexander Crum Brown Road, Edinburgh EH9 3FF, UK
| | - Mengjie Shi
- Forestry College, Fujian Agriculture and Forestry University, National Positioning Observation Research Station of Red Earth Hilly Ecosystem in Changting, Fujian, 350002, Fujian Province, China
| | - Wenxin Chen
- Forestry College, Fujian Agriculture and Forestry University, National Positioning Observation Research Station of Red Earth Hilly Ecosystem in Changting, Fujian, 350002, Fujian Province, China
| | - Chuifan Zhou
- Forestry College, Fujian Agriculture and Forestry University, National Positioning Observation Research Station of Red Earth Hilly Ecosystem in Changting, Fujian, 350002, Fujian Province, China.
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17
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Yang Y, Shi G, Liu Y, Ma L, Zhang Z, Jiang S, Pan J, Zhang Q, Yao B, Zhou H, Feng H. Experimental Warming Has Not Affected the Changes in Soil Organic Carbon During the Growing Season in an Alpine Meadow Ecosystem on the Qinghai-Tibet Plateau. FRONTIERS IN PLANT SCIENCE 2022; 13:847680. [PMID: 35371126 PMCID: PMC8971846 DOI: 10.3389/fpls.2022.847680] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/03/2022] [Accepted: 02/23/2022] [Indexed: 06/14/2023]
Abstract
The effects of climate warming and season on soil organic carbon (SOC) have received widespread attention, but how climate warming affects the seasonal changes of SOC remains unclear. Here, we established a gradient warming experiment to investigate plant attributes and soil physicochemical and microbial properties that were potentially associated with changes in SOC at the beginning (May) and end (August) of the growing season in an alpine meadow ecosystem on the Qinghai-Tibet Plateau. The SOC of August was lower than that of May, and the storage of SOC in August decreased by an average of 18.53 million grams of carbon per hectare. Warming not only failed to alter the content of SOC regardless of the season but also did not affect the change in SOC during the growing season. Among all the variables measured, microbial biomass carbon was highly coupled to the change in SOC. These findings indicate that alpine meadow soil is a source of carbon during the growing season, but climate warming has no significant impact on it. This study highlights that in the regulation of carbon source or pool in alpine meadow ecosystem, more attention should be paid to changes in SOC during the growing season, rather than climate warming.
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Affiliation(s)
- Yue Yang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Guoxi Shi
- Key Laboratory of Utilization of Agriculture Solid Waste Resources in Gansu Province, College of Bioengineering and Biotechnology, Tianshui Normal University, Tianshui, China
- Key Laboratory of Restoration Ecology of Cold Area in Qinghai Province, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China
| | - Yongjun Liu
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Li Ma
- Key Laboratory of Restoration Ecology of Cold Area in Qinghai Province, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China
| | - Zhonghua Zhang
- Key Laboratory of Restoration Ecology of Cold Area in Qinghai Province, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China
| | - Shengjing Jiang
- State Key Laboratory of Grassland and Agro-Ecosystems, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou, China
| | - Jianbin Pan
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Qi Zhang
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
| | - Buqing Yao
- Key Laboratory of Utilization of Agriculture Solid Waste Resources in Gansu Province, College of Bioengineering and Biotechnology, Tianshui Normal University, Tianshui, China
| | - Huakun Zhou
- Key Laboratory of Restoration Ecology of Cold Area in Qinghai Province, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China
| | - Huyuan Feng
- Ministry of Education Key Laboratory of Cell Activities and Stress Adaptations, School of Life Sciences, Lanzhou University, Lanzhou, China
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Zhang Y, Zhang Y, Xu W, Hu J, Zhang Z. Possible effects of temperature on bacterial communities in the rhizosphere of rice under different climatic regions. Arch Microbiol 2022; 204:212. [PMID: 35296917 DOI: 10.1007/s00203-022-02812-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/27/2021] [Revised: 01/21/2022] [Accepted: 02/18/2022] [Indexed: 11/25/2022]
Abstract
Global warming is an indisputable fact. However, the effect of warming on the rhizosphere bacterial community of crops is not well understood. Therefore, we carried out pot experiments with three rice (Oryza sativa L.) varieties in black soil across three climatic regions of northeast China to simulate temperature change, and analyzed the response of the rhizosphere bacterial community to different temperatures. Results showed that climate had stronger effects on rhizosphere bacterial communities than rice variety. The rhizosphere bacterial diversity differed significantly among the three climatic regions and positively correlated with the mean daily average temperature (MAveT), mean daily maximum temperature (MMaxT), and mean daily minimum temperature (MMinT), and negatively correlated with the daily temperature range (DTR). Principal co-ordinate analysis revealed that bulk soil bacterial communities maintained a high similarity across the three climatic regions, while rhizosphere bacterial communities notably varied. This change was significantly correlated with MAveT, MMaxT, MMinT, and DTR. Compared with bulk soil, Proteobacteria and Bacteroidetes were enriched in the rhizosphere, while Actinobacteria was depleted. Moreover, these changes were strengthened by increasing the temperature and decreasing DTR. Additionally, correlation analysis revealed that changes in rhizosphere bacterial communities were closely related to the formation of rice yields. Our study revealed that the increasing temperature indirectly reshapes the rhizosphere bacterial community that may promote rice production in areas with lower temperatures.
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Affiliation(s)
- Yang Zhang
- College of Environmental Science and Engineering, Yangzhou University, Yangzhou, 225127, People's Republic of China
| | - Yujie Zhang
- College of Environmental Science and Engineering, Yangzhou University, Yangzhou, 225127, People's Republic of China
| | - Wenjie Xu
- College of Environmental Science and Engineering, Yangzhou University, Yangzhou, 225127, People's Republic of China
| | - Jian Hu
- College of Environmental Science and Engineering, Yangzhou University, Yangzhou, 225127, People's Republic of China.
- Jiangsu Collaborative Innovation Center for Solid Organic Waste Resource Utilization, Nanjing, 210095, People's Republic of China.
| | - Zujian Zhang
- College of Environmental Science and Engineering, Yangzhou University, Yangzhou, 225127, People's Republic of China.
- Innovation Center of Rice Cultivation Technology in Yangtze Valley, Ministry of Agriculture/Key Laboratory of Crop Genetic and Physiology of Jiangsu Province, Yangzhou University, Yangzhou, 225009, People's Republic of China.
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Influences of Environmental Variables and Their Interactions on Chinese Farmland Soil Organic Carbon Density and Its Dynamics. LAND 2022. [DOI: 10.3390/land11020208] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/10/2022]
Abstract
Farmland is one of the most important and active components of the soil carbon pool. Exploring the controlling factors of farmland soil organic carbon density (SOCD) and its sequestration rate (SOCDSR) is vital for improving carbon sequestration and addressing climate change. Present studies provide considerable attention to the impacts of natural factors and agricultural management on SOCD and SOCDSR. However, few of them focus on the interaction effects of environmental variables on SOCD and SOCDSR. Therefore, using 64 samples collected from 19 agricultural stations in China, this study explored the effects of natural factors, human activities, and their interactions on farmland SOCD and SOCDSR by using geographical detector methods. Results of geographical detectors showed that SOCD was associated with natural factors, including groundwater depth, soil type, clay content, mean annual temperature (MAT), and mean annual precipitation. SOCDSR was related to natural factors and agricultural management, including MAT, groundwater depth, fertilization, and their interactions. Interaction effects existed in all environmental variable pairs, and the explanatory power of interaction effects was often greater than that of the sum of two single variables. Specifically, the interaction effect of soil type and MAT explained 74.8% of the variation in SOCD, and further investigation revealed that SOCD was highest in Luvisols and was under a low MAT (<6 °C). The interaction effect of groundwater depth and fertilization explained 40.4% of the variation in SOCDSR, and fertilization was conducive to SOCD increase at a high groundwater depth (<3 m). These findings suggest that low soil temperature, high soil moisture, and fertilization are conducive to soil carbon accumulation. These findings also highlight the importance of agricultural management and interaction effects in explaining SOCD and SOCDSR, which promote our knowledge to better understand the variation of SOCD and its dynamics.
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Han Y, Qu C, Hu X, Wang P, Wan D, Cai P, Rong X, Chen W, Huang Q. Warming and humidification mediated changes of DOM composition in an Alfisol. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 805:150198. [PMID: 34537712 DOI: 10.1016/j.scitotenv.2021.150198] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 08/29/2021] [Accepted: 09/03/2021] [Indexed: 06/13/2023]
Abstract
Dissolved organic matter (DOM) represents the most mobile and reactive pool of soil organic matter (SOM). Climate changes, such as global warming and altered precipitation exert considerable influences on the quality and quantity of soil DOM. However, rare reports have focused on the interactive effects of soil warming and increased precipitation. In the present study, we conducted a 90-day incubation experiment to investigate how the concentration, source and chemical composition of DOM from an Alfisol respond to the variations of temperatures (15, 30 and 45 °C) and moistures (40%, 60%, and 80% of saturated soil water content). Four DOM components were identified through fluorescence excitation emission matrix (EEM)-parallel factor analysis (PARAFAC). Increased temperature alone aggravated the decomposition of plant-derived aromatic components (C2 and C4) but promoted the accumulation of microbial-derived aliphatic carbon (C1) and tryptophan-like component (C3). Increased fungi/bacteria ratio with warming was responsible for the decomposition of plant-derived components. Warming-induced disassociation of Ca-bearing mineral to colloidal Ca facilitated the accrual of microbial-derived aliphatic DOM. Humidification alone and humidification + warming significantly increased the concentration of DOM and the percentage of plant-derived aromatic carbon (C2, C4), which was attributed to the release of Fe-bearing mineral-OC. Based on the above findings along with the results of two-way ANOVA and Variation partition analysis, we infer that moisture will play a dominant role in regulating the chemical composition of DOM in Alfisols under both warming and humidification which in turn impact global C cycling and the ultimate climate.
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Affiliation(s)
- Yafeng Han
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
| | - Chenchen Qu
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
| | - Xiping Hu
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
| | - Peng Wang
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
| | - Dan Wan
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
| | - Peng Cai
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
| | - Xingmin Rong
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China
| | - Wenli Chen
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China
| | - Qiaoyun Huang
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China; Key Laboratory of Arable Land Conservation (Middle and Lower Reaches of Yangtze River), Ministry of Agriculture, College of Resources and Environment, Huazhong Agricultural University, Wuhan 430070, China.
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21
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Wen Z, Song K, Shang Y, Lyu L, Tao H, Liu G. Natural and anthropogenic impacts on the DOC characteristics in the Yellow River continuum. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2021; 287:117231. [PMID: 34000672 DOI: 10.1016/j.envpol.2021.117231] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2020] [Revised: 03/24/2021] [Accepted: 04/21/2021] [Indexed: 06/12/2023]
Abstract
The Yellow River is the second largest river in China. Carbon transport by the Yellow River has significant influence on riverine carbon cycles in Asia. During the wet season, the riverine carbon was mainly found in dissolved form, i.e., dissolved organic carbon (DOC), along the entire course of the river. The distinct spatial variations of DOC concentration were observed at different reaches of the mainstream (p < 0.01), while the highest mean DOC concentration was generally observed at midstream (4.13 ± 0.91 mg/L). Carbon stable isotope analysis δ13C and C: N ratio of DOC, evidenced the sources of DOC in headwater and upstream were primarily the terrestrial plants (94% and 61%), but it was changed to soil organic matter (SOM) in mid- and downstream (36% and 37%), and the contribution of sewage to DOC were also increased to 17% and 18%. In the whole mainstream of the Yellow River, water temperature (WT) had a significant impact on DOC concentration, and it could explain 67% of the DOC variance. However, in a large catchment, the driving mechanisms on the DOC variations in headwaters will not necessarily be those controlling DOC trends in downstream. The study firstly quantified, in headwater and upstream, the natural factors explained as much as 65% and 73% of the DOC variations, respectively. In mid- and downstream areas, DOC was significantly influenced by the amount of wastewater discharged by the industry and the use of chemical fertilizers (p < 0.05). These findings may facilitate a better assessment of global riverine carbon cycling and may help to reveal the importance of the balance between development and environmental sustainability with the changing DOC transport features in the Yellow River due to human disturbances.
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Affiliation(s)
- Zhidan Wen
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China
| | - Kaishan Song
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China; School of Environment and Planning, Liaocheng University, Liaocheng, 252000, China
| | - Yingxin Shang
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China
| | - Lili Lyu
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Hui Tao
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Ge Liu
- Northeast Institute of Geography and Agroecology, Chinese Academy of Sciences, Changchun, 130102, China.
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22
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Spatiotemporal Changes and Driving Factors of Cultivated Soil Organic Carbon in Northern China’s Typical Agro-Pastoral Ecotone in the Last 30 Years. REMOTE SENSING 2021. [DOI: 10.3390/rs13183607] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
In order to explore the spatiotemporal changes and driving factors of soil organic carbon (SOC) in the agro-pastoral ecotone of northern China, we took Aohan banner, Chifeng City, Inner Mongolia Autonomous Region as the study area, used the random forest (RF) method to predict the SOC from 1989 to 2018, and the geographic detector method (GDM) was applied to analyze quantitatively the natural and anthropogenic factors that are affecting Aohan banner. The results indicated that: (1) After adding the terrain factors, the R2 and residual predictive deviation (RPD) of the RF model increased by 1.178 and 0.39%, with root mean square errors (RMSEs) of 1.42 g/kg and 1.05 g/kg, respectively; (2) The spatial distribution of SOC was higher in the south and lower in the north; the negative growth of SOC accounted for 55.923% of the total area, showing a trend of degradation; (3) Precipitation was the main driving factor of SOC spatial variation in the typical agro-pastoral ecotone of northern China, which was also affected by temperature, elevation, soil type and soil texture (p < 0.01). (4). Anthropogenic factors (carbon input and gross domestic product (GDP)) had a greater impact on SOC than did climate factors (temperature and precipitation), making anthropogenic factors the dominant factors affecting SOC temporal variation (p < 0.01). The results of this work constitute a basis for a regional assessment of the temporal evolution of organic carbon in the soil surface, which is a key tool for monitoring the sustainable development of agropastoral ecotones.
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23
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Effects of climate changes and road exposure on the rapidly rising legionellosis incidence rates in the United States. PLoS One 2021; 16:e0250364. [PMID: 33886659 PMCID: PMC8061983 DOI: 10.1371/journal.pone.0250364] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Accepted: 03/30/2021] [Indexed: 11/27/2022] Open
Abstract
Legionellosis is an infection acquired through inhalation of aerosols that are contaminated with environmental bacteria Legionella spp. The bacteria require warm temperature for proliferation in bodies of water and moist soil. The legionellosis incidence in the United States has been rising rapidly in the past two decades without a clear explanation. In the meantime, the US has recorded consecutive years of above-norm temperature since 1997 and precipitation surplus since 2008. The present study analyzed the legionellosis incidence in the US during the 20-year period of 1999 to 2018 and correlated with concurrent temperature, precipitation, solar ultraviolet B (UVB) radiation, and vehicle mileage data. The age-adjusted legionellosis incidence rates rose exponentially from 0.40/100,000 in 1999 (with 1108 cases) to 2.69/100,000 in 2018 (with 9933 cases) at a calculated annual increase of 110%. In regression analyses, the rise correlated with an increase in vehicle miles driven and with temperature and precipitation levels that have been above the 1901–2000 mean since 1997 and 2008, respectively, suggesting more road exposure to traffic-generated aerosols and promotive effects of anomalous climate. Remarkably, the regressions with cumulative anomalies of temperature and precipitation were robust (R2 ≥ 0.9145, P ≤ 4.7E-11), implying possible changes to microbial ecology in the terrestrial and aquatic environments. An interactive synergy between annual precipitation and vehicle miles was also found in multiple regressions. Meanwhile, the bactericidal UVB radiation has been decreasing, which also contributed to the rising incidence in an inverse correlation. The 2018 legionellosis incidence peak corresponded to cumulative effects of the climate anomalies, vast vehicle miles (3,240 billion miles, 15904 km per capita), record high precipitation (880.1 mm), near record low UVB radiation (7488 kJ/m2), and continued above-norm temperature (11.96°C). These effects were examined and demonstrated in California, Florida, New Jersey, Ohio, and Wisconsin, states that represent diverse incidence rates and climates. The incidence and above-norm temperature both rose most in cold Wisconsin. These results suggest that warming temperature and precipitation surplus have likely elevated the density of Legionella bacteria in the environment, and together with road exposure explain the rapidly rising incidence of legionellosis in the United States. These trends are expected to continue, warranting further research and efforts to prevent infection.
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Chen Q, Yuan Y, Hu Y, Wang J, Si G, Xu R, Zhou J, Xi C, Hu A, Zhang G. Excessive nitrogen addition accelerates N assimilation and P utilization by enhancing organic carbon decomposition in a Tibetan alpine steppe. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 764:142848. [PMID: 33268263 DOI: 10.1016/j.scitotenv.2020.142848] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2020] [Revised: 09/23/2020] [Accepted: 10/03/2020] [Indexed: 05/23/2023]
Abstract
High amounts of deposited nitrogen (N) dramatically influence the stability and functions of alpine ecosystems by changing soil microbial community functions, but the mechanism is still unclear. To investigate the impacts of increased N deposition on microbial community functions, a 2-year multilevel N addition (0, 10, 20, 40, 80 and 160 kg N ha-1 year-1) field experiment was set up in an alpine steppe on the Tibetan Plateau. Soil microbial functional genes (GeoChip 4.6), together with soil enzyme activity, soil organic compounds and environmental variables, were used to explore the response of microbial community functions to N additions. The results showed that the N addition rate of 40 kg N ha-1 year-1 was the critical value for soil microbial functional genes in this alpine steppe. A small amount of added N (≤40 kg N ha-1 year-1) had no significant effects on the abundance of microbial functional genes, while high amounts of added N (>40 kg N ha-1 year-1) significantly increased the abundance of soil organic carbon degradation genes. Additionally, the abundance of microbial functional genes associated with NH4+, including ammonification, N fixation and assimilatory nitrate reduction pathways, was significantly increased under high N additions. Further, high N additions also increased soil organic phosphorus utilization, which was indicated by the increase in the abundance of phytase genes and alkaline phosphatase activity. Plant richness, soil NO2-/NH4+ and WSOC/WSON were significantly correlated with the abundance of microbial functional genes, which drove the changes in microbial community functions under N additions. These findings help us to predict that increased N deposition in the future may alter soil microbial functional structure, which will lead to changes in microbially-mediated biogeochemical dynamics in alpine steppes on the Tibetan Plateau and will have extraordinary impacts on microbial C, N and P cycles.
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Affiliation(s)
- Qiuyu Chen
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China
| | - Yanli Yuan
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China
| | - Yilun Hu
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China; University of Chinese Academy of Sciences, Beijing 100101, China
| | - Jian Wang
- Land and Resources College, China West Normal University, Nanchong 637009, Sichuan, China
| | - Guicai Si
- Lanzhou Center for Oil and Gas Resources, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, China
| | - Ri Xu
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China
| | - Jizhong Zhou
- Institute for Environmental Genomics and Department of Microbiology and Plant Biology, University Oklahoma, Norman, OK 73019, USA; State Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing 100084, China
| | - Chuanwu Xi
- Department of Environmental Health Sciences, School of Public Health, University of Michigan, Ann Arbor, MI 48109, USA
| | - Ang Hu
- College of Resources and Environment, Hunan Agricultural University, Changsha 410128, China
| | - Gengxin Zhang
- CAS Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences (CAS), Beijing 100101, China; CAS Center for Excellence in Tibetan Plateau Earth Sciences, Chinese Academy of Sciences, Beijing 100101, China.
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25
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Wang C, Xiao R, Guo Y, Wang Q, Cui Y, Xiu Y, Ma Z, Zhang M. Changes in soil microbial community composition during Phragmites australis straw decomposition in salt marshes with freshwater pumping. THE SCIENCE OF THE TOTAL ENVIRONMENT 2021; 762:143996. [PMID: 33360338 DOI: 10.1016/j.scitotenv.2020.143996] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/25/2020] [Revised: 11/04/2020] [Accepted: 11/15/2020] [Indexed: 06/12/2023]
Abstract
The dynamic changes of soil microorganisms after Phragmites australis straw addition in the incubation tubes were analyzed by phospholipid fatty acid stable isotope probing (PLFA-SIP). After comparing soils from different freshwater pumping areas in the Yellow River Estuary (10-year pumping area, 15-year pumping area and natural salt marsh without pumping), the results showed that the total PLFA contents significantly increased by 59.99%-146.93% after the addition of straw to surface soils (0-10 cm) in the pumping areas, whereas the changes in deeper soils (10-20 cm) were not significant. In particular, the PLFA results showed that bacteria and fungi were significantly increased after 10 days with straw addition. Straw treatment also improved the ratio of fungi to bacteria (F:B) in the surface soils of all sampling sites. The soil microorganisms directly absorbed straw-derived 13C, where Gram-negative bacteria (GN) were found to have the highest PLFA-13C values during the 40-day decomposition process. Soil characteristics can significantly affect microbial community composition. Accordingly, soil organic carbon (SOC) was found to be significantly positively related to bacterial, fungal and other microbial biomasses, while moisture, electric conductivity (EC) and soil aggregate composition were important factors of influence on the microbial community. The findings indicated that both fungi and bacteria were essential microbial communities in straw decomposition, the significant increase of fungi biomass and the absorption of straw-derived 13C by bacteria were the main changes of microbial community. Long-term freshwater pumping can promote straw decomposition by increasing microbial biomass and changing microbial community composition.
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Affiliation(s)
- Chen Wang
- State Key Laboratory of Water Environment Simulation, School of Environment, Beijing Normal University, Beijing 100875, China; School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China
| | - Rong Xiao
- College of Environment and Resources, Fuzhou University, Fuzhou 350116, China.
| | - Yutong Guo
- School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China
| | - Qian Wang
- School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China
| | - Yuan Cui
- School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China
| | - Yujiao Xiu
- School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China
| | - Ziwen Ma
- School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China
| | - Mingxiang Zhang
- School of Ecology and Nature Conservation, Beijing Forestry University, Beijing 100083, China.
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26
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Jia M, Gao Z, Gu H, Zhao C, Liu M, Liu F, Xie L, Wang L, Zhang G, Liu Y, Han G. Effects of precipitation change and nitrogen addition on the composition, diversity, and molecular ecological network of soil bacterial communities in a desert steppe. PLoS One 2021; 16:e0248194. [PMID: 33730102 PMCID: PMC7968660 DOI: 10.1371/journal.pone.0248194] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Accepted: 02/19/2021] [Indexed: 11/19/2022] Open
Abstract
Currently, the impact of changes in precipitation and increased nitrogen(N) deposition on ecosystems has become a global problem. In this study, we conducted a 8-year field experiment to evaluate the effects of interaction between N deposition and precipitation change on soil bacterial communities in a desert steppe using high-throughput sequencing technology. The results revealed that soil bacterial communities were sensitive to precipitation addition but were highly tolerant to precipitation reduction. Reduced precipitation enhanced the competitive interactions of soil bacteria and made the ecological network more stable. Nitrogen addition weakened the effect of water addition in terms of soil bacterial diversity and community stability, and did not have an interactive influence. Moreover, decreased precipitation and increased N deposition did not have a superimposed effect on soil bacterial communities in the desert steppe. Soil pH, moisture content, and NH4+-N and total carbon were significantly related to the structure of bacterial communities in the desert steppe. Based on network analysis and relative abundance, we identified Actinobacteria, Proteobacteria, Acidobacteria and Cyanobacteria members as the most important keystone bacteria that responded to precipitation changes and N deposition in the soil of the desert steppe. In summary, we comprehensively analyzed the responses of the soil bacterial community to precipitation changes and N deposition in a desert steppe, which provides a model for studying the effects of ecological factors on bacterial communities worldwide.
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Affiliation(s)
- Meiqing Jia
- Key Laboratory of Water Resource and Environment, Tianjin Normal University, Tianjin, China
| | - Zhiwei Gao
- College of Life Sciences, Tianjin Normal University, Tianjin, China
- Tianjin Key Laboratory of Animal and Plant Resistance, Tianjin Normal University, Tianjin, China
| | - Huijun Gu
- College of Life Sciences, Tianjin Normal University, Tianjin, China
- Tianjin Key Laboratory of Animal and Plant Resistance, Tianjin Normal University, Tianjin, China
| | - Chenyu Zhao
- Graduate School of Life and Environmental Sciences, University of Tsukuba, Tsukuba, Japan
| | - Meiqi Liu
- College of Life Sciences, Tianjin Normal University, Tianjin, China
- Tianjin Key Laboratory of Animal and Plant Resistance, Tianjin Normal University, Tianjin, China
| | - Fanhui Liu
- College of Life Sciences, Tianjin Normal University, Tianjin, China
- Tianjin Key Laboratory of Animal and Plant Resistance, Tianjin Normal University, Tianjin, China
| | - Lina Xie
- College of Life Sciences, Tianjin Normal University, Tianjin, China
- Tianjin Key Laboratory of Animal and Plant Resistance, Tianjin Normal University, Tianjin, China
- * E-mail: (LX); (LW); (GZ)
| | - Lichun Wang
- Institute of Agricultural Environment and Resource, Jilin Academy of Agricultural Sciences, Changchun, China
- * E-mail: (LX); (LW); (GZ)
| | - Guogang Zhang
- College of Life Sciences, Tianjin Normal University, Tianjin, China
- Tianjin Key Laboratory of Animal and Plant Resistance, Tianjin Normal University, Tianjin, China
- * E-mail: (LX); (LW); (GZ)
| | - Yuhua Liu
- Tianjin Agricultural Ecological Environment Monitoring and Agricultural Product Quality Testing Center, Tianjin, China
| | - Guodong Han
- College of Grassland, Resources and Environment, Inner Mongolia Agricultural University, Hohhot, China
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27
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Jiang H, Chen Y, Hu Y, Wang Z, Lu X. Soil Bacterial Communities and Diversity in Alpine Grasslands on the Tibetan Plateau Based on 16S rRNA Gene Sequencing. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.630722] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023] Open
Abstract
The Tibetan Plateau, widely known as the world’s “Third Pole,” has gained extensive attention due to its susceptibility to climate change. Alpine grasslands are the dominant ecosystem on the Tibetan Plateau, albeit little is known about the microbial community and diversity among different alpine grassland types. Here, soil bacterial composition and diversity in the upper soils of five alpine grassland ecosystems, alpine meadow (AM), alpine steppe (AS), alpine meadow steppe (AMS), alpine desert (AD), and alpine desert steppe (ADS), were investigated based on the 16S rRNA gene sequencing technology. Actinobacteria (46.12%) and Proteobacteria (29.67%) were the two dominant soil bacteria at the phylum level in alpine grasslands. There were significant differences in the relative abundance at the genus level among the five different grassland types, especially for the Rubrobacter, Solirubrobacter, Pseudonocardia, Gaiella, Haliangium, and Geodermatophilus. Six alpha diversity indices were calculated based on the operational taxonomic units (OTUs), including Good’s coverage index, phylogenetic diversity (PD) whole tree index, Chao1 index, observed species index, Shannon index, and Simpson index. The Good’s coverage index value was around 0.97 for all the grassland types in the study area, meaning the soil bacteria samplings sequenced sufficiently. No statistically significant difference was shown in other diversity indices’ value, indicating the similar richness and evenness of soil bacteria in these alpine grasslands. The beta diversity, represented by Bray–Curtis dissimilarity and the non-metric multidimensional scaling (NMDS), showed that OTUs were clustered within alpine grasslands, indicating a clear separation of soil bacterial communities. In addition, soil organic matter (SOM), total nitrogen (TN), total phosphorus (TP), pH, and soil water content (SWC) were closely related to the variations in soil bacterial compositions. These results indicated that soil bacterial taxonomic compositions were similar, while soil bacterial community structures were different among the five alpine grassland types. The environmental conditions, including SOM, TN, TP, pH, and SWC, might influence the soil bacterial communities on the Tibetan Plateau.
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28
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Hu Y, Wang S, Niu B, Chen Q, Wang J, Zhao J, Luo T, Zhang G. Effect of increasing precipitation and warming on microbial community in Tibetan alpine steppe. ENVIRONMENTAL RESEARCH 2020; 189:109917. [PMID: 32980009 DOI: 10.1016/j.envres.2020.109917] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/05/2020] [Revised: 07/01/2020] [Accepted: 07/06/2020] [Indexed: 05/15/2023]
Abstract
Soil microorganisms play an important role in regulating the feedback of Alpine steppe ecosystems to future climate change. However, the interaction effect of warming and increasing precipitation on soil microorganisms remains unclear, in the face of an ongoing warmer and wetter climate on the Tibetan Plateau. In this study, we investigate the multi-factorial effects on soil microbial diversity, community structure, and microbial interactions in a three-year climate change experiment established in an Alpine steppe on the Tibetan Plateau, involving warming (+2 °C), +15% increasing precipitation and +30% increasing precipitation. Compared to warming, warming plus increasing precipitation alleviated the decrease in microbial diversity, and increased the dissimilarities in microbial community structures, largely influenced by water and substrate availability. We further observed differences in moisture increased the differences in microbial diversity and dissimilarities in microbial community structures across different precipitation levels under ambient temperature. Interestingly, warming plus increasing precipitation could create more ecological niches for microbial species to coexist but may lessen the strength of microbial interactions in contrast to increasing precipitation alone. Collectively, our findings indicate that microbial responses to future climate change in Alpine steppe soils will be more complex than those under single-climate-factor conditions.
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Affiliation(s)
- Yilun Hu
- Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Shang Wang
- Key Laboratory of Environmental Biotechnology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, 100085, China.
| | - Bin Niu
- Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China; University of Chinese Academy of Sciences, Beijing, 100049, China
| | - Qiuyu Chen
- Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
| | - Jian Wang
- Key Laboratory of Mountain Surface Processes and Ecological Regulation of Chinese Academy of Sciences, Institute of Mountain Hazards and Environment, Chinese Academy of Sciences, Chengdu, 610041, China
| | - Jingxue Zhao
- State Key Laboratory of Grassland Agro-ecosystem, Institute of Innovation Ecology and College of Life Sciences, Lanzhou University, Lanzhou, 730000, China
| | - Tianxiang Luo
- Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China
| | - Gengxin Zhang
- Key Laboratory of Alpine Ecology, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, 100101, China; Center for Excellence in Tibetan Plateau Earth Sciences, Chinese Academy of Sciences, Beijing, 100101, China.
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