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Karimi Nezhad MT, Šamonil P, Daněk P, Jaroš J, Hájek M, Hájková P, Jabinski S, Meador TB, Roleček J. Lipid biomarkers and stable isotopes uncover paleovegetation changes in extremely species-rich forest-steppe ecosystems, Central Europe. ENVIRONMENTAL RESEARCH 2024; 259:119564. [PMID: 38971353 DOI: 10.1016/j.envres.2024.119564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2024] [Revised: 06/29/2024] [Accepted: 07/03/2024] [Indexed: 07/08/2024]
Abstract
The historical development of the vegetation of semi-dry grasslands in Central Europe is not satisfactorily understood. Long-term continuity of open vegetation or, conversely, deep-past forest phases are considered possible sources of the current extreme species diversity of these ecosystems. We aimed to reveal the trajectory of paleovegetation development in these ecosystems through detailed analysis of terrestrial in-situ soil geoarchives. We measured the bulk soil carbon and nitrogen contents, lipid molecular distribution, and compound-specific stable carbon and hydrogen isotopic signatures of mid- and long-chain n-alkanes extracted from soil and modern plant material tissues (i.e., deciduous and Pinus leaves and grass/herbaceous species). The C23-C33 n-alkane homologues were identified in soils with different abundances. Normally, C27 and C29 n-alkanes were the most abundant homologues in tree-leaf samples, while grass-derived n-alkanes were mostly C31 and C33 homologues. Soils were largely dominated by C29 and C31 n-alkanes. Odd-numbered C27-C33 soil n-alkane δ13C values ranged from -36.2‰ to -23.2‰, whereas their δ2H values showed a wider range of variability that fluctuated from -224‰ to -172‰. Molecular distribution in combination with radiocarbon analysis of soil organic matter (SOM) and δ13C and δ2H values of n-alkanes revealed a large contribution of C3 trees (both deciduous and coniferous trees/pine trees) as the main source of n-alkanes between the late Pleistocene and early Holocene (ca 15,000-8200 calibrated year before present/cal year BP). A clear shift toward more grassy/herbaceous vegetation was observed from the early Holocene (ca 11,700-8200 cal year BP) onwards. Distribution patterns of lipids and soil geochemical parameters showed that plants are the main source of SOM and that biodegradation and kinetic isotope fractionation are not the main reasons for 13C enrichment in soil profiles. Past C3 vegetation shifts as well as paleoclimate changes (i.e., aridity) can have played a role in the observed 13C depth profiles.
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Affiliation(s)
- Mohammad Tahsin Karimi Nezhad
- Department of Forest Ecology, The Silva Tarouca Research Institute, Lidická 25/27, 602 00, Brno, Czech Republic; Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37, Brno, Czech Republic.
| | - Pavel Šamonil
- Department of Forest Ecology, The Silva Tarouca Research Institute, Lidická 25/27, 602 00, Brno, Czech Republic; Faculty of Forestry and Wood Technology, Mendel University in Brno, Lesnická 3, 613 00, Brno, Czech Republic
| | - Pavel Daněk
- Department of Forest Ecology, The Silva Tarouca Research Institute, Lidická 25/27, 602 00, Brno, Czech Republic
| | - Jakub Jaroš
- Department of Forest Ecology, The Silva Tarouca Research Institute, Lidická 25/27, 602 00, Brno, Czech Republic; Faculty of Forestry and Wood Technology, Mendel University in Brno, Lesnická 3, 613 00, Brno, Czech Republic
| | - Michal Hájek
- Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37, Brno, Czech Republic
| | - Petra Hájková
- Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37, Brno, Czech Republic; Institute of Botany of the Czech Academy of Sciences, Department of Paleoecology, Lidická 25/27, 602 00, Brno, Czech Republic
| | - Stanislav Jabinski
- University of Southern Bohemia, Na Sádkách 7, 370 05, České Budějovice, Czech Republic; Biology Center Czech Academy of Sciences, Institute of Soil Biology and Biogeochemistry, Na Sádkách 7, 370 05, České Budějovice, Czech Republic
| | - Travis B Meador
- University of Southern Bohemia, Na Sádkách 7, 370 05, České Budějovice, Czech Republic; Biology Center Czech Academy of Sciences, Institute of Soil Biology and Biogeochemistry, Na Sádkách 7, 370 05, České Budějovice, Czech Republic
| | - Jan Roleček
- Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, 611 37, Brno, Czech Republic; Institute of Botany of the Czech Academy of Sciences, Department of Paleoecology, Lidická 25/27, 602 00, Brno, Czech Republic
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Chae E, Choi SS. Comparison of polymeric components and tire wear particle contents in particulate matter collected at bus stop and college campus. Heliyon 2023; 9:e16558. [PMID: 37251472 PMCID: PMC10220417 DOI: 10.1016/j.heliyon.2023.e16558] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/13/2023] [Revised: 05/19/2023] [Accepted: 05/19/2023] [Indexed: 05/31/2023] Open
Abstract
Particulate matter (PM2.5) samples were collected at two different places of a college campus (CC) and a bus stop (BS) nearby the college campus. The traffic volume of college campus was very low due to untact classes. Polymeric components and tire wear particle (TWP) contents in the PM2.5 samples were analyzed using pyrolysis-gas chromatography/mass spectrometry (Py-GC/MS). Various polymeric components such as natural rubber (NR), bitumen, saturated hydrocarbons, poly(ethylene terephthalate) (PET), and plant-related particles (PRPs) were observed. NR and bitumen are key components of TWP of bus tire tread and asphalt pavement wear particle (APWP), respectively. The TWP contents in the PM2.5 samples collected at the bus stop were larger than those collected at the college campus. For the same sampling site, the TWP content in the PM2.5 sample collected for higher fine dust concentration in the air was greater than that for lower one. The TWP2.5 concentration in the air for the BS sampling was higher than those for the CC sampling, even when the PM2.5 concentration in the air for the former was lower than those for the latter. It can be concluded that the TWPs and APWPs in the PM2.5 samples collected at the college campus should be transferred mostly from the outside road.
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Chae E, Choi SS. Analysis of Polymeric Components in Particulate Matter Using Pyrolysis-Gas Chromatography/Mass Spectrometry. Polymers (Basel) 2022; 14:polym14153122. [PMID: 35956638 PMCID: PMC9370720 DOI: 10.3390/polym14153122] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Revised: 07/22/2022] [Accepted: 07/29/2022] [Indexed: 11/16/2022] Open
Abstract
Particulate matters (PMs) such as PM10 and PM2.5 were collected at a bus stop and were analyzed using pyrolysis-gas chromatography/mass spectrometry to identify organic polymeric materials in them. The major pyrolysis products of the PM samples were isoprene, toluene, styrene, dipentene, and 1-alkenes. The pyrolysis products generated from the PM samples were identified using reference polymeric samples such as common rubbers (natural rubber, butadiene rubber, and styrene-butadiene rubber), common plastics (polyethylene, polypropylene, polystyrene, and poly(ethylene terephthalate)), plant-related components (bark, wood, and leaf), and bitumen. The major sources of the principal polymeric materials in the PM samples were found to be the abrasion of the tire tread and asphalt pavement, plant-related components, and lint from polyester fabric. The particles produced by the abrasion of the tire tread and asphalt pavement on the road were non-exhaustive sources, while the plant-related components and lint from polyester fabric were inflowed from the outside.
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Soares JMDS, Rocha ADJ, Nascimento FDS, de Amorim VBO, Ramos APDS, Ferreira CF, Haddad F, Amorim EP. Gene Expression, Histology and Histochemistry in the Interaction between Musa sp. and Pseudocercospora fijiensis. PLANTS (BASEL, SWITZERLAND) 2022; 11:1953. [PMID: 35956430 PMCID: PMC9370387 DOI: 10.3390/plants11151953] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/21/2022] [Revised: 07/14/2022] [Accepted: 07/18/2022] [Indexed: 06/15/2023]
Abstract
Bananas are the main fruits responsible for feeding more than 500 million people in tropical and subtropical countries. Black Sigatoka, caused by the fungus Pseudocercospora fijiensis, is one of the most destructive disease for the crop. This fungus is mainly controlled with the use of fungicides; however, in addition to being harmful to human health, they are associated with a high cost. The development of resistant cultivars through crosses of susceptible commercial cultivars is one of the main focuses of banana breeding programs worldwide. Thus, the objective of the present study was to investigate the interaction between Musa sp. and P. fijiensis through the relative expression of candidate genes involved in the defence response to black Sigatoka in four contrasting genotypes (resistant: Calcutta 4 and Krasan Saichon; susceptible: Grand Naine and Akondro Mainty) using quantitative real-time PCR (RT-qPCR) in addition to histological and histochemical analyses to verify the defence mechanisms activated during the interaction. Differentially expressed genes (DEGs) related to the jasmonic acid and ethylene signalling pathway, GDSL-like lipases and pathogenesis-related proteins (PR-4), were identified. The number and distance between stomata were directly related to the resistance/susceptibility of each genotype. Histochemical tests showed the production of phenolic compounds and callosis as defence mechanisms activated by the resistant genotypes during the interaction process. Scanning electron microscopy (SEM) showed pathogenic structures on the leaf surface in addition to calcium oxalate crystals. The resistant genotype Krasan Saichon stood out in the analyses and has potential for use in breeding programs for resistance to black Sigatoka in banana and plantains.
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Affiliation(s)
- Julianna Matos da Silva Soares
- Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana 44036-900, BA, Brazil; (J.M.d.S.S.); (A.d.J.R.); (F.d.S.N.)
| | - Anelita de Jesus Rocha
- Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana 44036-900, BA, Brazil; (J.M.d.S.S.); (A.d.J.R.); (F.d.S.N.)
| | - Fernanda dos Santos Nascimento
- Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Feira de Santana 44036-900, BA, Brazil; (J.M.d.S.S.); (A.d.J.R.); (F.d.S.N.)
| | | | | | - Cláudia Fortes Ferreira
- Embrapa Mandioca e Fruticultura, Cruz das Almas 44380-000, BA, Brazil; (V.B.O.d.A.); (A.P.d.S.R.); (C.F.F.); (F.H.)
| | - Fernando Haddad
- Embrapa Mandioca e Fruticultura, Cruz das Almas 44380-000, BA, Brazil; (V.B.O.d.A.); (A.P.d.S.R.); (C.F.F.); (F.H.)
| | - Edson Perito Amorim
- Embrapa Mandioca e Fruticultura, Cruz das Almas 44380-000, BA, Brazil; (V.B.O.d.A.); (A.P.d.S.R.); (C.F.F.); (F.H.)
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Pereira RFP, Rocha J, Nunes P, Fernandes T, Ravishankar AP, Cruz R, Fernandes M, Anand S, Casal S, de Zea Bermudez V, Crespí AL. Vicariance Between Cercis siliquastrum L. and Ceratonia siliqua L. Unveiled by the Physical-Chemical Properties of the Leaves' Epicuticular Waxes. FRONTIERS IN PLANT SCIENCE 2022; 13:890647. [PMID: 35860538 PMCID: PMC9289549 DOI: 10.3389/fpls.2022.890647] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 03/06/2022] [Accepted: 06/03/2022] [Indexed: 06/15/2023]
Abstract
Classically, vicariant phenomena have been essentially identified on the basis of biogeographical and ecological data. Here, we report unequivocal evidences that demonstrate that a physical-chemical characterization of the epicuticular waxes of the surface of plant leaves represents a very powerful strategy to get rich insight into vicariant events. We found vicariant similarity between Cercis siliquastrum L. (family Fabaceae, subfamily Cercidoideae) and Ceratonia siliqua L. (family Fabaceae, subfamily Caesalpinoideae). Both taxa converge in the Mediterranean basin (C. siliquastrum on the north and C. siliqua across the south), in similar habitats (sclerophyll communities of maquis) and climatic profiles. These species are the current representation of their subfamilies in the Mediterranean basin, where they overlap. Because of this biogeographic and ecological similarity, the environmental pattern of both taxa was found to be very significant. The physical-chemical analysis performed on the epicuticular waxes of C. siliquastrum and C. siliqua leaves provided relevant data that confirm the functional proximity between them. A striking resemblance was found in the epicuticular waxes of the abaxial surfaces of C. siliquastrum and C. siliqua leaves in terms of the dominant chemical compounds (1-triacontanol (C30) and 1-octacosanol (C28), respectively), morphology (intricate network of randomly organized nanometer-thick and micrometer-long plates), wettability (superhydrophobic character, with water contact angle values of 167.5 ± 0.5° and 162 ± 3°, respectively), and optical properties (in both species the light reflectance/absorptance of the abaxial surface is significantly higher/lower than that of the adaxial surface, but the overall trend in reflectance is qualitatively similar). These results enable us to include for the first time C. siliqua in the vicariant process exhibited by C. canadensis L., C. griffithii L., and C. siliquastrum.
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Affiliation(s)
- Rui F. P. Pereira
- Chemistry Department and Chemistry Centre, University of Minho, Braga, Portugal
| | - João Rocha
- CQ-VR, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
- Herbarium and Botanical Garden, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
| | - Paulo Nunes
- CQ-VR, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
| | - Tânia Fernandes
- Chemistry Department and Chemistry Centre, University of Minho, Braga, Portugal
| | - Ajith P. Ravishankar
- Department of Applied Physics, School of Engineering Sciences, KTH Royal Institute of Technology, Albanova University Centre, Stockholm, Sweden
| | - Rebeca Cruz
- LAQV-REQUIMTE, Department of Chemical Sciences, Faculty of Pharmacy, Laboratory of Bromatology and Hydrology, University of Porto, Porto, Portugal
| | - Mariana Fernandes
- CQ-VR, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
- Department of Chemistry, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
| | - Srinivasan Anand
- Department of Applied Physics, School of Engineering Sciences, KTH Royal Institute of Technology, Albanova University Centre, Stockholm, Sweden
| | - Susana Casal
- LAQV-REQUIMTE, Department of Chemical Sciences, Faculty of Pharmacy, Laboratory of Bromatology and Hydrology, University of Porto, Porto, Portugal
| | - Verónica de Zea Bermudez
- CQ-VR, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
- Department of Chemistry, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
| | - António L. Crespí
- Herbarium and Botanical Garden, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
- CITAB, Department of Biological and Environmental Engineering, University of Trás-os-Montes e Alto Douro, Vila Real, Portugal
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Koner A, Das S, Mobarak SH, Barik A. Short-range attraction and oviposition stimulant of a biocontrol agent, Galerucella placida Baly (Coleoptera: Chrysomelidae) toward weed leaf surface waxes. BULLETIN OF ENTOMOLOGICAL RESEARCH 2022; 112:204-218. [PMID: 34448446 DOI: 10.1017/s0007485321000730] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Two Polygonaceae weeds, Rumex dentatus L. and Polygonum glabrum Willd. are abundant in wheat- and rice-fields, respectively, in India. Galerucella placida Baly (Coleoptera: Chrysomelidae) is a biocontrol agent of these two weeds. The importance of long-chain alkanes and free fatty acids present in leaf surface waxes of these weeds was assessed as short-range attractant and ovipositional stimulant in G. placida females. Extraction, TLC, GC-MS and GC-FID analyses demonstrated 19 n-alkanes from n-C14 to n-C35 and 14 free fatty acids from C12:0 to C22:0 in leaf surface waxes. Hentriacontane was predominant among alkanes in both weeds, while oleic acid and docosanoic acid were predominant among free fatty acids in R. dentatus and P. glabrum, respectively. Females of G. placida were attracted toward one leaf equivalent surface wax of both weeds against the control solvent (petroleum ether) in a short Y-tube olfactometer bioassay. But, the insect could not differentiate between one leaf equivalent surface wax of R. dentatus and P. glabrum, indicating that both weed leaves were equally attractive in females. A synthetic blend of either 2.44, 35.57 and 23.58 μg ml-1 of octadecane, heptacosane and nonacosane, respectively, resembling the amounts present in one leaf equivalent surface wax of R. dentatus or 4.08, 19.54 and 23.58 μg ml-1 of octadecane, palmitoleic acid and docosanoic acid, respectively, resembling the amounts present in one leaf equivalent surface wax of P. glabrum acted as short-range attractant and ovipositional stimulant in G. placida. These results could be a basis for host plant specificity of the biocontrol agent.
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Affiliation(s)
- Anamika Koner
- Department of Zoology, Ecology Research Laboratory, The University of Burdwan, Burdwan713 104, West Bengal, India
| | - Swati Das
- Department of Zoology, Ecology Research Laboratory, The University of Burdwan, Burdwan713 104, West Bengal, India
| | - Syed Husne Mobarak
- Department of Zoology, Ecology Research Laboratory, The University of Burdwan, Burdwan713 104, West Bengal, India
| | - Anandamay Barik
- Department of Zoology, Ecology Research Laboratory, The University of Burdwan, Burdwan713 104, West Bengal, India
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Vázquez C, Vallejo A, Vergès JM, Barrio RJ. Livestock activity biomarkers: Estimating domestication and diet of livestock in ancient samples. JOURNAL OF ARCHAEOLOGICAL SCIENCE: REPORTS 2021; 40:103220. [DOI: 10.1016/j.jasrep.2021.103220] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/03/2025]
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Wang X, Kong L, Zhi P, Chang C. Update on Cuticular Wax Biosynthesis and Its Roles in Plant Disease Resistance. Int J Mol Sci 2020; 21:ijms21155514. [PMID: 32752176 PMCID: PMC7432125 DOI: 10.3390/ijms21155514] [Citation(s) in RCA: 44] [Impact Index Per Article: 8.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Revised: 07/16/2020] [Accepted: 07/30/2020] [Indexed: 12/27/2022] Open
Abstract
The aerial surface of higher plants is covered by a hydrophobic layer of cuticular waxes to protect plant tissues against enormous environmental challenges including the infection of various pathogens. As the first contact site between plants and pathogens, the layer of cuticular waxes could function as a plant physical barrier that limits the entry of pathogens, acts as a reservoir of signals to trigger plant defense responses, and even gives cues exploited by pathogens to initiate their infection processes. Past decades have seen unprecedented proceedings in understanding the molecular mechanisms underlying the biosynthesis of plant cuticular waxes and their functions regulating plant–pathogen interactions. In this review, we summarized the recent progress in the molecular biology of cuticular wax biosynthesis and highlighted its multiple roles in plant disease resistance against bacterial, fungal, and insect pathogens.
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