The legacy of climate variability over the last century on populations' phenotypic variation in tree height

Genetic Diversity of Native Provenance and Plantation Populations of Pinus sylvestris var. mongolica Based on SSR Markers and Morphological Traits

Pinus sylvestris var. mongolica plays a crucial role in the ecological restoration and industrial raw material production of arid and semiarid regions in northern China. The widespread degradation of its near-mature plantation (over 30 years) is a significant concern, having been a topic of interest in recent decades. In this study, the genetic diversity and population genetic structure were assessed using 12 simple sequence repeat (SSR) markers within 11 native provenance populations and eight plantation populations. Additionally, variations in eight morphological traits of their offspring were evaluated at three sites in northern China. The results revealed high genetic diversity and weak genetic differentiation among the native provenance populations. The mean number of alleles (N a), allelic richness (A r), expected heterozygosity (H e), and Shannon-Wiener diversity index (I) were 5.492, 4.679, 0.550, and 1.120, respectively, and the genetic differentiation coefficient (F ST) was 0.022. Significant population effects of tree height and height to live crown base (HCB), as well as interactions of population with site and block within site, were observed in tree height, HCB, stem diameter at breast height (DBH), stem volume (VOL), crown shape (CS), and disease grade (DG). The genetic diversity parameters based on SSR markers and breeding values of tree height, DBH, HCB, VOL, and stem form (SF) of plantation populations were found to be lower than those of native provenance populations. Significant positive correlations were identified between the mean effective number of alleles per locus (N e) and VOL as well as H e and crown width (CW). Furthermore, the maximum temperature of the warmest month (BIO5) and the silt content (T_SILT) were identified as significant factors influencing genetic diversity parameters and morphological variation, respectively. The findings provide scientific support for the reduction of plantation degradation, the effective restoration, and the sustainable management of forests for this species.

Adaptive potential of maritime pine under contrasting environments

BACKGROUND

Predicting the adaptability of forest tree populations under future climates requires a better knowledge of both the adaptive significance and evolvability of measurable key traits. Phenotypic plasticity, standing genetic variation and degree of phenotypic integration shape the actual and future population genetic structure, but empirical estimations in forest tree species are still extremely scarce. We analysed 11 maritime pine populations covering the distribution range of the species (119 families and 8 trees/family, ca. 1300 trees) in a common garden experiment planted at two sites with contrasting productivity. We used plant height as a surrogate of fitness and measured five traits (mean and plasticity of carbon isotope discrimination, specific leaf area, needle biomass, Phenology growth index) related to four different strategies (acquisitive economics, photosynthetic organ size, growth allocation and avoidance of water stress).

RESULTS

Estimated values of additive genetic variation would allow adaptation of the populations to future environmental conditions. Overall phenotypic integration and selection gradients were higher at the high productivity site, while phenotypic integration within populations was higher at the low productivity site. Response to selection was related mainly to photosynthetic organ size and drought-avoidance mechanisms rather than to water use efficiency. Phenotypic plasticity of water use efficiency could be maladaptive, resulting from selection for height growth.

CONCLUSIONS

Contrary to the expectations in a drought tolerant species, our study suggests that variation in traits related to photosynthetic organ size and acquisitive investment of resources drive phenotypic selection across and within maritime pine populations. Both genetic variation and evolvability of key adaptive traits were considerably high, including plasticity of water use efficiency. These characteristics would enable a relatively fast micro-evolution of populations in response to the ongoing climate changes. Moreover, differentiation among populations in the studied traits would increase under the expected more productive future Atlantic conditions.

Clinal variations in seedling traits and responses to water availability correspond to seed-source environmental gradients in a foundational dryland tree species

BACKGROUND AND AIMS

In dryland ecosystems, conifer species are threatened by more frequent and severe droughts, which can push species beyond their physiological limits. Adequate seedling establishment will be critical for future resilience to global change. We used a common garden glasshouse experiment to determine how seedling functional trait expression and plasticity varied among seed sources in response to a gradient of water availability, focusing on a foundational dryland tree species of the western USA, Pinus monophylla. We hypothesized that the expression of growth-related seedling traits would show patterns consistent with local adaptation, given clinal variation among seed source environments.

METHODS

We collected P. monophylla seeds from 23 sites distributed across rangewide gradients of aridity and seasonal moisture availability. A total of 3320 seedlings were propagated with four watering treatments representing progressively decreasing water availability. Above- and below-ground growth-related traits of first-year seedlings were measured. Trait values and trait plasticity, here representing the degree of variation among watering treatments, were modelled as a function of watering treatment and environmental conditions at the seed source locations (i.e. water availability, precipitation seasonality).

KEY RESULTS

We found that, under all treatments, seedlings from more arid climates had larger above- and below-ground biomass compared to seedlings from sites experiencing lower growing-season water limitation, even after accounting for differences in seed size. Additionally, trait plasticity in response to watering treatments was greatest for seedlings from summer-wet sites that experience periodic monsoonal rain events.

CONCLUSIONS

Our results show that P. monophylla seedlings respond to drought through plasticity in multiple traits, but variation in trait responses suggests that different populations are likely to respond uniquely to changes in local climate. Such trait diversity will probably influence the potential for future seedling recruitment in woodlands that are projected to experience extensive drought-related tree mortality.

Plasticity in growth is genetically variable and highly conserved across spatial scales in a Mediterranean pine

Phenotypic plasticity is a main mechanism for sessile organisms to cope with changing environments. Plasticity is genetically based and can evolve under natural selection so that populations within a species show distinct phenotypic responses to environment. An important question that remains elusive is whether the intraspecific variation in plasticity at different spatial scales is independent from each other. To test whether variation in plasticity to macro- and micro-environmental variation is related among each other, we used growth data of 25 Pinus pinaster populations established in seven field common gardens in NW Spain. Phenotypic plasticity to macro-environmental variation was estimated across test sites while plasticity to micro-environmental variation was estimated by using semivariography and kriging for modeling within-site heterogeneity. We provide empirical evidence of among-population variation in the magnitude of plastic responses to both micro- and macro-environmental variation. Importantly, we found that such responses were positively correlated across spatial scales. Selection for plasticity at one scale of environmental variation may impact the expression of plasticity at other scales, having important consequences on the ability of populations to buffer climate change. These results improve our understanding of the ecological drivers underlying the expression of phenotypic plasticity.

Forest tree species adaptation to climate across biomes: Building on the legacy of ecological genetics to anticipate responses to climate change

Intraspecific variation plays a critical role in extant and future forest responses to climate change. Forest tree species with wide climatic niches rely on the intraspecific variation resulting from genetic adaptation and phenotypic plasticity to accommodate spatial and temporal climate variability. A centuries-old legacy of forest ecological genetics and provenance trials has provided a strong foundation upon which to continue building on this knowledge, which is critical to maintain climate-adapted forests. Our overall objective is to understand forest trees intraspecific responses to climate across species and biomes, while our specific objectives are to describe ecological genetics models used to build our foundational knowledge, summarize modeling approaches that have expanded the traditional toolset, and extensively review the literature from 1994 to 2021 to highlight the main contributions of this legacy and the new analyzes of provenance trials. We reviewed 103 studies comprising at least three common gardens, which covered 58 forest tree species, 28 of them with range-wide studies. Although studies using provenance trial data cover mostly commercially important forest tree species from temperate and boreal biomes, this synthesis provides a global overview of forest tree species adaptation to climate. We found that evidence for genetic adaptation to local climate is commonly present in the species studied (79%), being more common in conifers (87.5%) than in broadleaf species (67%). In 57% of the species, clines in fitness-related traits were associated with temperature variables, in 14% of the species with precipitation, and in 25% of the species with both. Evidence of adaptation lags was found in 50% of the species with range-wide studies. We conclude that ecological genetics models and analysis of provenance trial data provide excellent insights on intraspecific genetic variation, whereas the role and limits of phenotypic plasticity, which will likely determine the fate of extant forests, is vastly understudied.

Drivers of population differentiation in phenotypic plasticity in a temperate conifer: A 27-year study

Phenotypic plasticity is a main mechanism for organisms to cope with changing environments and broaden their ecological range. Plasticity is genetically based and can evolve under natural selection, such that populations within a species show distinct phenotypic responses to the environment if evolved under different conditions. Understanding how intraspecific variation in phenotypic plasticity arises is critical to assess potential adaptation to ongoing climate change. Theory predicts that plasticity is favored in more favorable but variable environments. Yet, many theoretical predictions about benefits, costs, and selection on plasticity remain untested. To test these predictions, we took advantage of three genetic trials in the northern Rocky Mountains, USA, which assessed 23 closely located Pinus ponderosa populations over 27 years. Mean environmental conditions and their spatial patterns of variation at the seed source populations were characterized based on six basic climate parameters. Despite the small area of origin, there was significant genetic variation in phenotypic plasticity for tree growth among populations. We found a significant negative correlation between phenotypic plasticity and the patch size of environmental heterogeneity at the seed source populations, but not with total environmental spatial variance. These results show that populations exposed to high microhabitat heterogeneity have evolved higher phenotypic plasticity and that the trigger was the grain rather than the total magnitude of spatial heterogeneity. Contrary to theoretical predictions, we also found a positive relationship between population plasticity and summer drought at the seed source, indicating that drought can act as a trigger of plasticity. Finally, we found a negative correlation between the quantitative genetic variance within populations and their phenotypic plasticity, suggesting compensatory adaptive mechanisms for the lack of genetic diversity. These results improve our understanding of the microevolutionary drivers of phenotypic plasticity, a critical process for resilience of long-lived species under climate change, and support decision-making in tree genetic improvement programs and seed transfer strategies.

Managing Uncertainty in Scots Pine Range-Wide Adaptation Under Climate Change

Forests provide important ecosystem services and renewable materials. Yet, under a future climate, optimal conditions will likely shift outside the current range for some tree species. This will challenge the persistence of populations to rely on inherent plasticity and genetic diversity to acclimate or adapt to future uncertain conditions. An opportunity to study such processes is offered by Scots pine (Pinus sylvestris L.), a forest tree with a large distribution range including populations locally adapted to a wide variety of environments, which hinders a range-wide assessment of the species to climate change. Here we evaluate tree height growth uncertainty of Scots pine marginal populations in Spain and the Nordic countries linked to their genetic adaptation promoted by different climatic drivers. Our aims are to: (i) review the main climatic drivers of Scots pine adaptation across its range; (ii) undertake provenance-based modeling and prediction of tree height under current and future climate scenarios including four representative concentration pathways (RCPs) and five general circulation models (GCMs) at two extremes of its climatic niche; (iii) estimate uncertainty in population tree height linked to the main drivers of local adaptation that may change among RCPs and GCMs in the Nordic countries and Spain. Our models revealed that tree height adaptation is mostly driven by drought in Spain and by photoperiod in the Nordic countries, whereas the literature review also highlighted temperature as a climatic driver for the Nordic region. Model predictions for the Nordic countries showed an overall increase in tree height but with high uncertainty in magnitude depending on the RCPs and GCMs whereas predictions for Spain showed tree height to be maintained in the north and reduced in the south, but with similar magnitudes among RCPs and GCMs. Both models predicted tree height outside the data range used to develop the models (extrapolation). Predictions using higher emission RCPs resulted in larger extrapolated areas, constituting a further source of uncertainty. An expanded network of Scots pine field trials throughout Europe, facilitated by data collection and international research collaboration, would limit the need for uncertain predictions based on extrapolation.